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  nf-core/methylseq v1.6.1
----------------------------------------------------

Run Name: festering_kirch

## nf-core/methylseq execution completed successfully! ##


The workflow was completed at 2021-09-15T04:38:13.558790+03:00 (duration: 4h 16m 44s)

The command used to launch the workflow was as follows:

  nextflow run nf-core/methylseq -profile cfdna



Pipeline Configuration:
-----------------------
 - Pipeline Release: master
 - Run Name: festering_kirch
 - Input: null
 - Aligner: bismark
 - Data Type: Paired-End
 - Bismark Index: results/reference_genome/BismarkIndex/
 - Fasta Ref: /home/agalicina/GENOMES/HG38_FASTA/hg38.fa
 - Fasta Index: /home/agalicina/GENOMES/HG38_FASTA/hg38.fa.fai
 - Trimming: 5'R1: 0 / 5'R2: 0 / 3'R1: 0 / 3'R2: 0
 - Deduplication: No
 - Directional Mode: Yes
 - All C Contexts: Yes
 - Cytosine report: Yes
 - Save Intermediates: Reference genome build
 - Output dir: ./results
 - Launch dir: /mnt/lustre/agalicina/tmp/DimaTO/methylseq
 - Working dir: /mnt/lustre/agalicina/tmp/DimaTO/methylseq/work
 - Pipeline dir: /home/agalicina/.nextflow/assets/nf-core/methylseq
 - User: agalicina
 - Config Profile: cfdna
 - Max Resources: 30 GB memory, 20 cpus, 5h time per job
 - Config Files: /home/agalicina/.nextflow/assets/nf-core/methylseq/nextflow.config, /mnt/lustre/agalicina/tmp/DimaTO/methylseq/nextflow.config
 - Date Started: 2021-09-15T00:21:29.697823+03:00
 - Date Completed: 2021-09-15T04:38:13.558790+03:00
 - Pipeline script file path: /home/agalicina/.nextflow/assets/nf-core/methylseq/main.nf
 - Pipeline script hash ID: 18179884b6320ca99aa10bcca5ebb512
 - Pipeline repository Git URL: https://github.com/nf-core/methylseq
 - Pipeline repository Git Commit: 03972a686bedeb2920803cd575f4d671e9135af0
 - Pipeline Git branch/tag: master
 - Nextflow Version: 21.04.0
 - Nextflow Build: 5552
 - Nextflow Compile Timestamp: 02-05-2021 16:22 UTC

--
nf-core/methylseq
https://github.com/nf-core/methylseq