FastQCFastQC Report
Wed 15 Sep 2021
2_S2_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename2_S2_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences317905
Sequences flagged as poor quality0
Sequence length150
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGAATAAAATCG27099985.24527767729353No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAATAAAATTG119293.7523788553184128No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGAATAAAATTG97993.082367373901008No Hit
TTATTTTAAAGATTTTGGTAGTTTGTATGTGTGTACGTTGAATAAAATCG35481.1160566836004466No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAATAAAATCG26410.8307513250813923No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGCTGAATAAAATCG10110.31801953413755685No Hit
TTATTTTAAAGATTTTGGTATTTTATATGTGTGTACGTTGAATAAAATCG6610.20792375080605843No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGGATAAAATCG5730.18024252528271023No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGAGTAAAATCG5620.17678237209229172No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGAATAAAATAG4180.1314858212359038No Hit
TTATTTTAAAGATTTTGGTAGTTTACATGTGTGTACGTTGAATAAAATCG3910.12299271795033107No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGAATAAGATCG3850.12110536166464825No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGCGTGTACGTTGAATAAAATCG3620.11387049590286408No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGAATAAAGTCG3450.10852298642676271No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGCGTACGTTGAATAAAATCG3410.10726474890297416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)