FastQCFastQC Report
Wed 15 Sep 2021
1_S1_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename1_S1_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences181098
Sequences flagged as poor quality0
Sequence length150
%GC28

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAATAAAATTG14496780.04892378712078No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGAATAAAATTG135047.456736131818131No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAATAAAATCG29501.6289522799810048No Hit
TTATTTTAAAGATTTTGGTAGTTTACATGTGTGTATGTTGAATAAAATTG17450.9635666876497808No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGGTTAGGGAGTTGT12620.6968602635037383No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGCTGAATAAAATTG12360.6825033959513633No Hit
TTATTTTAAAGATTTTGGTAGTTTGTATGTGTGTATGTTGAATAAAATTG11290.6234193641012049No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGTTGAATAAAATCG9740.537830346000508No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAGTAAAATTG6220.34346044682989324No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGCATGTTGAATAAAATTG5400.2981810953185568No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGGATAAAATTG4120.2275011319837878No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTGTGTTGAATAAAATTG3670.20265270737390806No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGCGTATGTTGAATAAAATTG3550.19602646081127345No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAATGAAATTG3340.18443052932666293No Hit
TTATTTTAAAGATTTTGGTATTTTATATGTGTGTATGTTGAATAAAATTG3140.17338678505560526No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTACGCTGAATAAAATTG3050.1684171001336293No Hit
TTATTTTAAAGATTTGGTAGTTTATATGTGTGTATGTTGAATAAAATTGT2490.13749461617466785No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGCACGTTGAATAAAATTG2350.12976399518492748No Hit
TTATTTTAAAGATTTTGTTATTTTGTTAATGTATTGTATAGTTATGAATA2250.12424212304939866No Hit
TTATTTTAAAGATTTTGGTAGTTTATACGTGTGTATGTTGAATAAAATTG2230.1231377486222929No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAATAAAGTTG2190.12092899976808137No Hit
TTATTTTAAAGATTTTGTAGTTTATATGTGTGTATGTTGAATAAAATTGT2110.1165115020596583No Hit
TTATTTTAAAGATTTTGGTGTTTATATGTGTGTATGTTGAATAAAATTGT2040.11264619156478814No Hit
TTATTTTAAAGATTTTGGTAGTTTATGTGTGTGTATGTTGAATAAAATTG2020.11154181713768235No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAATAAGATTG2010.11098962992412947No Hit
TTATTTTAAAGATTTTGGTAGTTTATATGTGTGTATGTTGAATATTAGTA1900.10491557057504776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)