File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
1_S1_L001_R1_001_val_1_bismark_bt2_pe.bam	181020	175915	5105	0	0			7732815	384878	1372863	11970	2096429	19179	3847496
2_S2_L001_R1_001_val_1_bismark_bt2_pe.bam	317414	312780	4634	0	0			13754765	2441678	684457	18903	3731706	12173	6865848
3_S3_L001_R1_001_val_1_bismark_bt2_pe.bam	90144	85457	4687	0	0			5885938	227040	967121	9818	1696092	19417	2966450
4_S4_L001_R1_001_val_1_bismark_bt2_pe.bam	337378	329386	7992	0	0			22715550	4111092	497671	34262	6549145	24752	11498628