Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 1_S1_L001_R1_001 1_S1_L001_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 181098.0 0.0 150.0 28.0 1.000563230957824 150.0 pass pass pass pass fail fail pass pass fail fail pass 1_S1_L001_R2_001 1_S1_L001_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 181098.0 0.0 150.0 30.0 1.5858816773238797 150.0 pass pass pass pass fail pass pass pass fail fail pass 2_S2_L001_R1_001 2_S2_L001_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 317905.0 0.0 150.0 32.0 0.7288340856545195 150.0 pass pass pass pass fail fail pass pass fail fail pass 2_S2_L001_R2_001 2_S2_L001_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 317905.0 0.0 150.0 34.0 1.3453704723109103 150.0 pass pass pass pass fail fail pass pass fail fail pass 3_S3_L001_R1_001 3_S3_L001_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 90182.0 0.0 150.0 28.0 1.6078596615732628 150.0 pass pass pass pass fail fail pass pass fail fail pass 3_S3_L001_R2_001 3_S3_L001_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 90182.0 0.0 150.0 30.0 2.6790268568006916 150.0 pass pass pass pass fail warn pass pass fail fail pass 4_S4_L001_R1_001 4_S4_L001_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 337481.0 0.0 150.0 32.0 0.6850756042562396 150.0 pass pass pass pass fail fail pass pass fail fail pass 4_S4_L001_R2_001 4_S4_L001_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 337481.0 0.0 150.0 33.0 1.826769507024099 150.0 pass pass pass pass fail fail pass pass fail fail pass