Module	Section	Sample Name	Source
SAMTools (merged library; unfiltered)	flagstat	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R2.mLb.mkD.sorted.bam.flagstat
SAMTools (merged library; unfiltered)	flagstat	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R1.mLb.mkD.sorted.bam.flagstat
SAMTools (merged library; unfiltered)	flagstat	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R2.mLb.mkD.sorted.bam.flagstat
SAMTools (merged library; unfiltered)	flagstat	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R1.mLb.mkD.sorted.bam.flagstat
SAMTools (merged library; unfiltered)	flagstat	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R2.mLb.mkD.sorted.bam.flagstat
SAMTools (merged library; unfiltered)	flagstat	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R1.mLb.mkD.sorted.bam.flagstat
SAMTools (merged library; unfiltered)	stats	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R2.mLb.mkD.sorted.bam.stats
SAMTools (merged library; unfiltered)	stats	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R1.mLb.mkD.sorted.bam.stats
SAMTools (merged library; unfiltered)	stats	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R2.mLb.mkD.sorted.bam.stats
SAMTools (merged library; unfiltered)	stats	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R1.mLb.mkD.sorted.bam.stats
SAMTools (merged library; unfiltered)	stats	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R2.mLb.mkD.sorted.bam.stats
SAMTools (merged library; unfiltered)	stats	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R1.mLb.mkD.sorted.bam.stats
SAMTools (merged library; unfiltered)	idxstats	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R2.mLb.mkD.sorted.bam.idxstats
SAMTools (merged library; unfiltered)	idxstats	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R1.mLb.mkD.sorted.bam.idxstats
SAMTools (merged library; unfiltered)	idxstats	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R2.mLb.mkD.sorted.bam.idxstats
SAMTools (merged library; unfiltered)	idxstats	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R1.mLb.mkD.sorted.bam.idxstats
SAMTools (merged library; unfiltered)	idxstats	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R2.mLb.mkD.sorted.bam.idxstats
SAMTools (merged library; unfiltered)	idxstats	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R1.mLb.mkD.sorted.bam.idxstats
SAMTools (merged library; filtered)	flagstat	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R2.mLb.clN.sorted.bam.flagstat
SAMTools (merged library; filtered)	flagstat	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R1.mLb.clN.sorted.bam.flagstat
SAMTools (merged library; filtered)	flagstat	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R2.mLb.clN.sorted.bam.flagstat
SAMTools (merged library; filtered)	flagstat	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R1.mLb.clN.sorted.bam.flagstat
SAMTools (merged library; filtered)	flagstat	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R2.mLb.clN.sorted.bam.flagstat
SAMTools (merged library; filtered)	flagstat	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R1.mLb.clN.sorted.bam.flagstat
SAMTools (merged library; filtered)	stats	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R2.mLb.clN.sorted.bam.stats
SAMTools (merged library; filtered)	stats	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R1.mLb.clN.sorted.bam.stats
SAMTools (merged library; filtered)	stats	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R2.mLb.clN.sorted.bam.stats
SAMTools (merged library; filtered)	stats	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R1.mLb.clN.sorted.bam.stats
SAMTools (merged library; filtered)	stats	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R2.mLb.clN.sorted.bam.stats
SAMTools (merged library; filtered)	stats	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R1.mLb.clN.sorted.bam.stats
SAMTools (merged library; filtered)	idxstats	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R2.mLb.clN.sorted.bam.idxstats
SAMTools (merged library; filtered)	idxstats	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_INPUT_R1.mLb.clN.sorted.bam.idxstats
SAMTools (merged library; filtered)	idxstats	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R2.mLb.clN.sorted.bam.idxstats
SAMTools (merged library; filtered)	idxstats	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T0_R1.mLb.clN.sorted.bam.idxstats
SAMTools (merged library; filtered)	idxstats	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R2.mLb.clN.sorted.bam.idxstats
SAMTools (merged library; filtered)	idxstats	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/SPT5_T15_R1.mLb.clN.sorted.bam.idxstats
FastQC (library; raw)	all_sections	SPT5_T15_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_T15_R2_T1_1_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_T15_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_T15_R2_T1_2_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_INPUT_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_INPUT_R1_T1_1_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_INPUT_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_INPUT_R1_T1_2_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_T0_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_T0_R2_T1_2_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_T0_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_T0_R2_T1_1_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_T15_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_T15_R1_T1_1_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_T15_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_T15_R1_T1_2_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_INPUT_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_INPUT_R2_T1_1_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_T0_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_T0_R1_T1_2_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_T0_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_T0_R1_T1_1_fastqc.zip
FastQC (library; raw)	all_sections	SPT5_INPUT_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/fastqc/SPT5_INPUT_R2_T1_2_fastqc.zip
cutadapt (library; trimmed)	all_sections	SPT5_T15_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_T15_R2_T1_1.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_T15_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_T15_R2_T1_2.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_INPUT_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_INPUT_R1_T1_1.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_INPUT_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_INPUT_R1_T1_2.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_T0_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_T0_R2_T1_2.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_T0_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_T0_R2_T1_1.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_T15_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_T15_R1_T1_1.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_T15_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_T15_R1_T1_2.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_INPUT_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_INPUT_R2_T1_1.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_T0_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_T0_R1_T1_2.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_T0_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_T0_R1_T1_1.fastq.gz_trimming_report.txt
cutadapt (library; trimmed)	all_sections	SPT5_INPUT_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/SPT5_INPUT_R2_T1_2.fastq.gz_trimming_report.txt
phantompeakqualtools	all_sections	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/phantompeakqualtools/SPT5_INPUT_R2.spp.out
phantompeakqualtools	all_sections	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/phantompeakqualtools/SPT5_INPUT_R1.spp.out
phantompeakqualtools	all_sections	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/phantompeakqualtools/SPT5_T0_R2.spp.out
phantompeakqualtools	all_sections	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/phantompeakqualtools/SPT5_T0_R1.spp.out
phantompeakqualtools	all_sections	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/phantompeakqualtools/SPT5_T15_R2.spp.out
phantompeakqualtools	all_sections	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/phantompeakqualtools/SPT5_T15_R1.spp.out
deepTools	plotProfile	SPT5_T15_R2.plotProfile.tab	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_T15_R2.plotProfile.tab
deepTools	plotProfile	SPT5_INPUT_R1.plotProfile.tab	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_INPUT_R1.plotProfile.tab
deepTools	plotProfile	SPT5_INPUT_R2.plotProfile.tab	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_INPUT_R2.plotProfile.tab
deepTools	plotProfile	SPT5_T15_R1.plotProfile.tab	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_T15_R1.plotProfile.tab
deepTools	plotProfile	SPT5_T0_R2.plotProfile.tab	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_T0_R2.plotProfile.tab
deepTools	plotProfile	SPT5_T0_R1.plotProfile.tab	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_T0_R1.plotProfile.tab
deepTools	plotFingerprint	SPT5_T0_R1.plotFingerprint.raw.txt	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_T0_R1.plotFingerprint.raw.txt
deepTools	plotFingerprint	SPT5_T15_R1.plotFingerprint.raw.txt	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_T15_R1.plotFingerprint.raw.txt
deepTools	plotFingerprint	SPT5_T15_R2.plotFingerprint.raw.txt	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_T15_R2.plotFingerprint.raw.txt
deepTools	plotFingerprint	SPT5_T0_R2.plotFingerprint.raw.txt	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/deeptools/SPT5_T0_R2.plotFingerprint.raw.txt
FastQC (library; trimmed)	all_sections	SPT5_T15_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_T15_R2_T1_1_val_1_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_T15_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_T15_R2_T1_2_val_2_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_INPUT_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_INPUT_R1_T1_1_val_1_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_INPUT_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_INPUT_R1_T1_2_val_2_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_T0_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_T0_R2_T1_2_val_2_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_T0_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_T0_R2_T1_1_val_1_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_T15_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_T15_R1_T1_1_val_1_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_T15_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_T15_R1_T1_2_val_2_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_INPUT_R2_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_INPUT_R2_T1_1_val_1_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_T0_R1_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_T0_R1_T1_2_val_2_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_T0_R1_T1_1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_T0_R1_T1_1_val_1_fastqc.zip
FastQC (library; trimmed)	all_sections	SPT5_INPUT_R2_T1_2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/trimgalore/fastqc/SPT5_INPUT_R2_T1_2_val_2_fastqc.zip
SAMTools (library)	flagstat	SPT5_T0_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T0_R2_T1.Lb.sorted.bam.flagstat
SAMTools (library)	flagstat	SPT5_INPUT_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_INPUT_R2_T1.Lb.sorted.bam.flagstat
SAMTools (library)	flagstat	SPT5_INPUT_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_INPUT_R1_T1.Lb.sorted.bam.flagstat
SAMTools (library)	flagstat	SPT5_T15_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T15_R1_T1.Lb.sorted.bam.flagstat
SAMTools (library)	flagstat	SPT5_T15_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T15_R2_T1.Lb.sorted.bam.flagstat
SAMTools (library)	flagstat	SPT5_T0_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T0_R1_T1.Lb.sorted.bam.flagstat
SAMTools (library)	stats	SPT5_T0_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T0_R2_T1.Lb.sorted.bam.stats
SAMTools (library)	stats	SPT5_INPUT_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_INPUT_R2_T1.Lb.sorted.bam.stats
SAMTools (library)	stats	SPT5_INPUT_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_INPUT_R1_T1.Lb.sorted.bam.stats
SAMTools (library)	stats	SPT5_T15_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T15_R1_T1.Lb.sorted.bam.stats
SAMTools (library)	stats	SPT5_T15_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T15_R2_T1.Lb.sorted.bam.stats
SAMTools (library)	stats	SPT5_T0_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T0_R1_T1.Lb.sorted.bam.stats
SAMTools (library)	idxstats	SPT5_T0_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T0_R2_T1.Lb.sorted.bam.idxstats
SAMTools (library)	idxstats	SPT5_INPUT_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_INPUT_R2_T1.Lb.sorted.bam.idxstats
SAMTools (library)	idxstats	SPT5_INPUT_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_INPUT_R1_T1.Lb.sorted.bam.idxstats
SAMTools (library)	idxstats	SPT5_T15_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T15_R1_T1.Lb.sorted.bam.idxstats
SAMTools (library)	idxstats	SPT5_T15_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T15_R2_T1.Lb.sorted.bam.idxstats
SAMTools (library)	idxstats	SPT5_T0_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/library/SPT5_T0_R1_T1.Lb.sorted.bam.idxstats
featureCounts	all_sections	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/macs/consensus/SPT5.consensus_peaks.featureCounts.txt.summary
featureCounts	all_sections	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/macs/consensus/SPT5.consensus_peaks.featureCounts.txt.summary
featureCounts	all_sections	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/macs/consensus/SPT5.consensus_peaks.featureCounts.txt.summary
featureCounts	all_sections	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/macs/consensus/SPT5.consensus_peaks.featureCounts.txt.summary
Picard (merged library; filtered)	InsertSizeMetrics	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R2.mLb.clN.CollectMultipleMetrics.insert_size_metrics
Picard (merged library; filtered)	InsertSizeMetrics	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R1.mLb.clN.CollectMultipleMetrics.insert_size_metrics
Picard (merged library; filtered)	InsertSizeMetrics	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R2.mLb.clN.CollectMultipleMetrics.insert_size_metrics
Picard (merged library; filtered)	InsertSizeMetrics	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R1.mLb.clN.CollectMultipleMetrics.insert_size_metrics
Picard (merged library; filtered)	InsertSizeMetrics	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R2.mLb.clN.CollectMultipleMetrics.insert_size_metrics
Picard (merged library; filtered)	InsertSizeMetrics	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R1.mLb.clN.CollectMultipleMetrics.insert_size_metrics
Picard (merged library; filtered)	AlignmentSummaryMetrics	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R2.mLb.clN.CollectMultipleMetrics.alignment_summary_metrics
Picard (merged library; filtered)	AlignmentSummaryMetrics	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R1.mLb.clN.CollectMultipleMetrics.alignment_summary_metrics
Picard (merged library; filtered)	AlignmentSummaryMetrics	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R2.mLb.clN.CollectMultipleMetrics.alignment_summary_metrics
Picard (merged library; filtered)	AlignmentSummaryMetrics	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R1.mLb.clN.CollectMultipleMetrics.alignment_summary_metrics
Picard (merged library; filtered)	AlignmentSummaryMetrics	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R2.mLb.clN.CollectMultipleMetrics.alignment_summary_metrics
Picard (merged library; filtered)	AlignmentSummaryMetrics	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R1.mLb.clN.CollectMultipleMetrics.alignment_summary_metrics
Picard (merged library; filtered)	DuplicationMetrics	SPT5_T0_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R2.mLb.mkD.MarkDuplicates.metrics.txt
Picard (merged library; filtered)	DuplicationMetrics	SPT5_INPUT_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R2.mLb.mkD.MarkDuplicates.metrics.txt
Picard (merged library; filtered)	DuplicationMetrics	SPT5_INPUT_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R1.mLb.mkD.MarkDuplicates.metrics.txt
Picard (merged library; filtered)	DuplicationMetrics	SPT5_T15_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R1.mLb.mkD.MarkDuplicates.metrics.txt
Picard (merged library; filtered)	DuplicationMetrics	SPT5_T15_R2_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R2.mLb.mkD.MarkDuplicates.metrics.txt
Picard (merged library; filtered)	DuplicationMetrics	SPT5_T0_R1_T1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R1.mLb.mkD.MarkDuplicates.metrics.txt
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_T15_R2_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R2.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_T15_R2_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R2.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_INPUT_R2_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R2.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_T0_R1_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R1.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_T0_R1_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R1.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_INPUT_R2_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R2.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_T0_R2_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R2.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_T0_R2_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T0_R2.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_INPUT_R1_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R1.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_INPUT_R1_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_INPUT_R1.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_T15_R1_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R1.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Picard (merged library; filtered)	BaseDistributionByCycle	SPT5_T15_R1_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/alignment/mergedLibrary/picard_metrics/SPT5_T15_R1.mLb.clN.CollectMultipleMetrics.base_distribution_by_cycle_metrics
Preseq (merged library; unfiltered)	all_sections	SPT5_INPUT_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/preseq/SPT5_INPUT_R2.mLb.clN.ccurve.txt
Preseq (merged library; unfiltered)	all_sections	SPT5_INPUT_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/preseq/SPT5_INPUT_R1.mLb.clN.ccurve.txt
Preseq (merged library; unfiltered)	all_sections	SPT5_T0_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/preseq/SPT5_T0_R2.mLb.clN.ccurve.txt
Preseq (merged library; unfiltered)	all_sections	SPT5_T0_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/preseq/SPT5_T0_R1.mLb.clN.ccurve.txt
Preseq (merged library; unfiltered)	all_sections	SPT5_T15_R2	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/preseq/SPT5_T15_R2.mLb.clN.ccurve.txt
Preseq (merged library; unfiltered)	all_sections	SPT5_T15_R1	/home/agalicina/DANIO/CHIPSEQ/chipseq/work/46/4bdec7237f8a2311b95879906d7755/preseq/SPT5_T15_R1.mLb.clN.ccurve.txt