Sample	mapped_passed	duplicates_failed	secondary_passed	paired in sequencing_failed	duplicates_passed	read2_passed	read1_failed	read1_passed	with mate mapped to a different chr_passed	total_failed	properly paired_passed_pct	singletons_passed	supplementary_passed	singletons_passed_pct	mapped_failed_pct	mapped_passed_pct	supplementary_failed	with itself and mate mapped_failed	mapped_failed	total_passed	properly paired_failed	flagstat_total	with mate mapped to a different chr (mapQ >= 5)_passed	properly paired_failed_pct	with mate mapped to a different chr (mapQ >= 5)_failed	with itself and mate mapped_passed	read2_failed	with mate mapped to a different chr_failed	properly paired_passed	paired in sequencing_passed	singletons_failed	secondary_failed	singletons_failed_pct
SPT5_INPUT_R1	165868	0	0	0	0	82934	0	82934	0	0	99.92	0	0	0.0	nan	100.0	0	0	0	165868	0	165868	0	nan	0	165868	0	0	165730	165868	0	0	nan
SPT5_INPUT_R2	171456	0	0	0	0	85728	0	85728	0	0	99.82	0	0	0.0	nan	100.0	0	0	0	171456	0	171456	0	nan	0	171456	0	0	171150	171456	0	0	nan
SPT5_T0_R1	102102	0	0	0	0	51051	0	51051	0	0	99.83	0	0	0.0	nan	100.0	0	0	0	102102	0	102102	0	nan	0	102102	0	0	101926	102102	0	0	nan
SPT5_T0_R2	85130	0	0	0	0	42565	0	42565	0	0	99.93	0	0	0.0	nan	100.0	0	0	0	85130	0	85130	0	nan	0	85130	0	0	85072	85130	0	0	nan
SPT5_T15_R1	120648	0	0	0	0	60324	0	60324	0	0	99.95	0	0	0.0	nan	100.0	0	0	0	120648	0	120648	0	nan	0	120648	0	0	120582	120648	0	0	nan
SPT5_T15_R2	122870	0	0	0	0	61435	0	61435	0	0	99.85	0	0	0.0	nan	100.0	0	0	0	122870	0	122870	0	nan	0	122870	0	0	122682	122870	0	0	nan