##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename NAN21-22_S4_R2_001.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 294324 Filtered Sequences 0 Sequence length 151 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29589160245172 32.0 32.0 32.0 32.0 32.0 2 31.16326225520175 32.0 32.0 32.0 32.0 32.0 3 31.24449925931966 32.0 32.0 32.0 32.0 32.0 4 31.209459643114393 32.0 32.0 32.0 32.0 32.0 5 31.2385772142265 32.0 32.0 32.0 32.0 32.0 6 34.853280738234055 36.0 36.0 36.0 32.0 36.0 7 34.79488251043068 36.0 36.0 36.0 32.0 36.0 8 34.7199514820402 36.0 36.0 36.0 32.0 36.0 9 34.72646131474158 36.0 36.0 36.0 32.0 36.0 10-14 34.69701553390142 36.0 36.0 36.0 32.0 36.0 15-19 34.68785759910846 36.0 36.0 36.0 32.0 36.0 20-24 34.61571193650535 36.0 36.0 36.0 32.0 36.0 25-29 34.439129666625895 36.0 36.0 36.0 32.0 36.0 30-34 34.40692638045148 36.0 36.0 36.0 32.0 36.0 35-39 34.25353623897473 36.0 36.0 36.0 32.0 36.0 40-44 34.17044957257988 36.0 36.0 36.0 32.0 36.0 45-49 34.06277639608051 36.0 36.0 36.0 32.0 36.0 50-54 33.93357660265558 36.0 36.0 36.0 32.0 36.0 55-59 33.74796007121404 36.0 36.0 36.0 28.0 36.0 60-64 33.79000149495114 36.0 36.0 36.0 27.0 36.0 65-69 33.674667373370845 36.0 36.0 36.0 27.0 36.0 70-74 33.42615077261793 36.0 36.0 36.0 22.2 36.0 75-79 33.30819369130619 36.0 36.0 36.0 21.0 36.0 80-84 33.20565091531781 36.0 36.0 36.0 21.0 36.0 85-89 33.07084505510933 36.0 36.0 36.0 21.0 36.0 90-94 32.95372446691401 36.0 36.0 36.0 16.8 36.0 95-99 32.82011456761936 36.0 36.0 36.0 14.0 36.0 100-104 32.723850586428554 36.0 35.2 36.0 14.0 36.0 105-109 32.615130944129604 36.0 32.0 36.0 14.0 36.0 110-114 32.48272583955097 36.0 32.0 36.0 14.0 36.0 115-119 32.376915915793475 36.0 32.0 36.0 14.0 36.0 120-124 32.25444747964828 36.0 32.0 36.0 14.0 36.0 125-129 32.09203870564412 36.0 32.0 36.0 14.0 36.0 130-134 31.950631277095987 36.0 32.0 36.0 14.0 36.0 135-139 31.72848629401612 36.0 32.0 36.0 14.0 36.0 140-144 31.427163941778446 36.0 32.0 36.0 14.0 36.0 145-149 31.11065424498172 36.0 31.0 36.0 14.0 36.0 150-151 28.873290999035078 34.0 20.5 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 39.0 4 21.0 5 22.0 6 15.0 7 15.0 8 27.0 9 36.0 10 92.0 11 63.0 12 32.0 13 20.0 14 40.0 15 179.0 16 291.0 17 364.0 18 537.0 19 655.0 20 936.0 21 1368.0 22 2021.0 23 3058.0 24 4075.0 25 4931.0 26 5521.0 27 6432.0 28 7236.0 29 8309.0 30 9374.0 31 12045.0 32 16353.0 33 26632.0 34 60037.0 35 123547.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.535451581360963 32.129070944046774 19.75687618606331 21.578601288528958 2 19.57605857703554 37.428982833333905 26.178910497094638 16.816048092535922 3 18.0319671824456 27.33367574977295 35.60371306409424 19.030644003687215 4 18.49343708886192 27.803558012326917 28.45355988210217 25.249445016708993 5 19.698421760939603 30.781099193888235 29.71976401179941 19.800715033372757 6 21.031577444779405 30.444653654126547 28.607989015358786 19.91577988573526 7 21.703958750412124 29.64593197352902 28.961384593945123 19.688724682113737 8 20.037654287423194 29.101870480126145 29.966083954107987 20.894391278342667 9 20.28023122644491 29.118423690855273 30.3054812629776 20.295863819722214 10-14 20.58288538871261 29.991081891617792 29.492497097536376 19.93353562213322 15-19 20.60525401759224 29.62846405390911 29.386079687768696 20.380202240729954 20-24 20.6346778688636 29.412972252810743 29.417458569544706 20.534891308780946 25-29 20.6976092806087 29.22917213369972 29.57255846269523 20.500660122996347 30-34 21.083096542629125 28.92057427977105 29.374328715348113 20.622000462251712 35-39 20.91239476603798 29.727098696947944 29.01024331614784 20.350263220866236 40-44 21.037168021219436 29.49073349882681 28.69065188560547 20.781446594348285 45-49 20.945071631795294 29.209090822503637 29.23113346821981 20.61470407748126 50-54 21.185252824087996 29.173193039563767 28.763783631516564 20.877770504831673 55-59 21.054332862191295 29.588650127017807 28.846890632666405 20.51012637812449 60-64 20.91669717877555 29.950890250326335 28.605544447181835 20.52686812371628 65-69 20.758235266895873 30.038137704061217 28.80431083998225 20.39931618906066 70-74 20.853840458198132 30.04379995208955 28.523255624033624 20.579103965678694 75-79 21.374951849326163 29.37599449006565 28.882849920985254 20.366203739622936 80-84 21.207309603212416 29.875518954604235 28.63043626216566 20.286735180017697 85-89 20.958986895188733 30.038437876007904 28.619475916438454 20.383099312364912 90-94 20.998318893055735 29.799492264866227 28.819141478421255 20.383047363656782 95-99 20.880331060018243 29.966104463592924 28.75893331155307 20.394631164835765 100-104 21.10686586504564 30.078347248726654 28.61825180555291 20.1965350806748 105-109 21.047956827216986 29.92862388455677 28.842702341792698 20.18071694643354 110-114 21.174257197952805 29.976387433949135 28.704821142810076 20.144534225287977 115-119 21.309062889691187 29.896767571158634 28.665956033304475 20.128213505845707 120-124 21.418055565954198 29.804677210662334 28.824694104106356 19.95257311927711 125-129 21.791964015868302 29.977836650121297 28.23281319345555 19.997386140554845 130-134 21.95447348824672 29.898197699033847 28.4031550817427 19.744173730976733 135-139 22.50187854268648 29.748152766358295 28.045485235743495 19.70448345521173 140-144 22.69840978131175 29.901801630717774 27.950834791640716 19.448953796329764 145-149 22.908540216780956 29.946808691657168 27.813098742534333 19.331552349027547 150-151 23.263664965653604 29.44176256489402 27.975170540881315 19.319401928571065 >>END_MODULE >>Per base GC content warn #Base %GC 1 48.11405286988992 2 36.39210666957146 3 37.06261118613281 4 43.742882105570914 5 39.499136794312356 6 40.94735733051466 7 41.39268343252586 8 40.93204556576586 9 40.576095046167126 10-14 40.51642101084583 15-19 40.98545625832219 20-24 41.16956917764455 25-29 41.198269403605046 30-34 41.705097004880834 35-39 41.262657986904216 40-44 41.818614615567725 45-49 41.55977570927655 50-54 42.06302332891967 55-59 41.564459240315784 60-64 41.443565302491834 65-69 41.15755145595653 70-74 41.432944423876826 75-79 41.7411555889491 80-84 41.49404478323011 85-89 41.34208620755364 90-94 41.38136625671252 95-99 41.27496222485401 100-104 41.30340094572043 105-109 41.22867377365053 110-114 41.31879142324078 115-119 41.4372763955369 120-124 41.3706286852313 125-129 41.78935015642315 130-134 41.69864721922345 135-139 42.20636199789821 140-144 42.147363577641514 145-149 42.24009256580851 150-151 42.583066894224665 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22.0 1 29.5 2 37.0 3 43.5 4 48.0 5 53.0 6 57.0 7 65.0 8 84.0 9 100.5 10 121.0 11 140.5 12 155.0 13 191.5 14 265.5 15 332.0 16 402.5 17 507.0 18 639.0 19 811.0 20 1062.0 21 1371.0 22 1744.0 23 2137.5 24 2578.0 25 3167.5 26 3785.0 27 4507.0 28 5248.0 29 6028.0 30 6894.0 31 7856.0 32 8838.0 33 9525.5 34 9804.0 35 9912.5 36 10300.5 37 10763.0 38 11213.5 39 11618.0 40 11458.5 41 10940.5 42 10548.0 43 10278.5 44 10078.5 45 9748.0 46 9293.0 47 8762.0 48 8074.0 49 7385.0 50 6577.5 51 5774.5 52 5123.0 53 4494.0 54 4019.5 55 3565.0 56 3167.0 57 2875.0 58 2728.0 59 2697.5 60 2664.0 61 2699.5 62 2829.0 63 2936.0 64 2758.5 65 2470.0 66 2100.5 67 1569.5 68 1075.5 69 686.0 70 404.0 71 253.5 72 196.0 73 151.0 74 130.5 75 116.5 76 81.5 77 65.5 78 64.5 79 63.5 80 56.0 81 45.0 82 48.0 83 46.5 84 36.0 85 46.0 86 49.5 87 35.5 88 32.0 89 32.5 90 33.0 91 31.5 92 28.5 93 29.0 94 34.0 95 37.5 96 37.0 97 42.0 98 41.0 99 44.0 100 109.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.2755466764518014 2 0.18924722414753808 3 0.11382014378711895 4 0.05809923757491744 5 0.024462836873649446 6 0.032277354208287465 7 0.03907258667319009 8 0.023103790380668923 9 0.022764028757423792 10-14 0.030986260039955964 15-19 0.02738478683355758 20-24 0.032617115831532595 25-29 0.0463434854106359 30-34 0.038053301803454696 35-39 0.04158682268520406 40-44 0.08629945230426332 45-49 0.11837294953860372 50-54 0.13196341446840898 55-59 0.1454859270735652 60-64 0.15343634905750125 65-69 0.15003873282504995 70-74 0.15031054212364606 75-79 0.15452358625188567 80-84 0.1576493931857409 85-89 0.15194139791522268 90-94 0.15968796292521167 95-99 0.16308557915766297 100-104 0.1538440630053954 105-109 0.16043543849635095 110-114 0.16899743140212825 115-119 0.1704244302197578 120-124 0.16383305472880227 125-129 0.17178347671273833 130-134 0.16974490697326755 135-139 0.16281376985906687 140-144 0.16655114771476331 145-149 0.16274581753441786 150-151 0.16291569834604042 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 294324.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.218772176280608 #Duplication Level Relative count 1 100.0 2 2.4826911692790774 3 0.20487478444392968 4 0.0761845932103055 5 0.047357990373973695 6 0.026767559776593827 7 0.021105191362314365 8 0.017501866007772888 9 0.016472344477903893 10++ 0.05919748796746712 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATCTGGTTTTATTACATTCTGAATTGGACGTTGAAAATGAGCTTATCTC 346 0.1175575216428154 No Hit GATCCAGCCATAAAATGCATCATTCTTTTTTGTTTTAGACAACATTTCAT 341 0.11585871352658975 No Hit >>END_MODULE >>Kmer Content fail #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GGGGG 205040 10.998021 27.921062 145-147 GATCG 99435 2.9467678 7.8091803 1 CCAGC 57600 2.5468855 13.897175 4 ATCTC 89210 2.0476377 5.5699043 2 GATCT 92515 2.0235503 22.249777 1 CAGCC 43555 1.9258611 8.279859 5 TCCAG 61510 1.9128904 11.21929 3 GATCA 71160 1.5043201 19.279308 1 ATCTG 63135 1.3809311 11.065843 2 AGCCA 44985 1.3521183 5.9387956 6 TCTGG 43645 1.3382542 7.8626523 3 ATCCA 55875 1.2395375 11.125528 2 CTGGT 37870 1.1611798 6.2820897 4 GGTTT 53085 1.14481 5.2747874 6 ATCAG 53885 1.1391273 6.2025666 2 GATCC 35920 1.1170709 24.378658 1 ATCAA 60750 0.9161115 5.1009855 2 >>END_MODULE