##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename NAN21-22_S4_R1_001.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 294324 Filtered Sequences 0 Sequence length 151 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.251270708470937 32.0 32.0 32.0 32.0 32.0 2 31.31981421834441 32.0 32.0 32.0 32.0 32.0 3 31.643824492735895 32.0 32.0 32.0 32.0 32.0 4 31.669870618773867 32.0 32.0 32.0 32.0 32.0 5 31.707234204482134 32.0 32.0 32.0 32.0 32.0 6 35.36048368464685 36.0 36.0 36.0 36.0 36.0 7 35.304987021105994 36.0 36.0 36.0 36.0 36.0 8 35.32179842622416 36.0 36.0 36.0 36.0 36.0 9 35.3633682608282 36.0 36.0 36.0 36.0 36.0 10-14 35.34635775539881 36.0 36.0 36.0 36.0 36.0 15-19 35.33339245185578 36.0 36.0 36.0 36.0 36.0 20-24 35.271013576874466 36.0 36.0 36.0 36.0 36.0 25-29 35.16344436743181 36.0 36.0 36.0 36.0 36.0 30-34 35.05382571587774 36.0 36.0 36.0 36.0 36.0 35-39 34.93983297318601 36.0 36.0 36.0 36.0 36.0 40-44 34.82160544162216 36.0 36.0 36.0 34.4 36.0 45-49 34.724094535274055 36.0 36.0 36.0 32.0 36.0 50-54 34.61253856294424 36.0 36.0 36.0 32.0 36.0 55-59 34.50045052391242 36.0 36.0 36.0 32.0 36.0 60-64 34.382878732281426 36.0 36.0 36.0 32.0 36.0 65-69 34.20175860616192 36.0 36.0 36.0 32.0 36.0 70-74 34.08003696606461 36.0 36.0 36.0 32.0 36.0 75-79 33.95077329745451 36.0 36.0 36.0 32.0 36.0 80-84 33.82716054416221 36.0 36.0 36.0 30.0 36.0 85-89 33.64562794743209 36.0 36.0 36.0 27.0 36.0 90-94 33.44718337614329 36.0 36.0 36.0 27.0 36.0 95-99 33.31136094915807 36.0 36.0 36.0 27.0 36.0 100-104 33.1848119759177 36.0 36.0 36.0 22.2 36.0 105-109 33.07839184028486 36.0 36.0 36.0 21.0 36.0 110-114 33.00166958861662 36.0 36.0 36.0 18.2 36.0 115-119 32.881364074965006 36.0 36.0 36.0 14.0 36.0 120-124 32.7572892458651 36.0 32.0 36.0 14.0 36.0 125-129 32.64011837294954 36.0 32.0 36.0 14.0 36.0 130-134 32.5051494271619 36.0 32.0 36.0 14.0 36.0 135-139 32.33338293853033 36.0 32.0 36.0 14.0 36.0 140-144 32.160408257566495 36.0 32.0 36.0 14.0 36.0 145-149 31.935458202525105 36.0 32.0 36.0 14.0 36.0 150-151 30.34557324581074 34.0 29.5 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 1.0 15 4.0 16 11.0 17 36.0 18 94.0 19 198.0 20 398.0 21 772.0 22 1428.0 23 2318.0 24 3159.0 25 3935.0 26 4593.0 27 5142.0 28 5932.0 29 6837.0 30 7861.0 31 9759.0 32 13332.0 33 21241.0 34 51493.0 35 155779.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 25.66382808093028 32.358178321179295 20.231549759071356 21.746443838819076 2 19.189801680466697 36.808200514400845 27.07637527478315 16.92562253034931 3 17.56681457723174 27.768566400065236 35.369425323285384 19.295193699417645 4 18.058264302751486 28.283058230325437 28.740732686858255 24.91794478006483 5 19.398887609107064 30.77897941363341 29.9968401846963 19.82529279256322 6 20.798657011102087 30.778641311181264 28.848774420683114 19.57392725703353 7 21.51487557252946 30.061024504940402 29.01518137461435 19.40891854791579 8 19.89209134182514 29.51417320426878 30.212045949518046 20.38168950438804 9 20.344724485427527 29.266245812409537 30.27058799546075 20.118441706702185 10-14 20.745186884515128 30.23625921103775 29.391330819976027 19.627223084471094 15-19 20.754814422201385 29.864027398377296 29.404194017477337 19.97696416194398 20-24 20.75997879887471 29.59242195675514 29.437286799581415 20.210312444788737 25-29 20.9036979655074 29.35873391228714 29.525624821625147 20.211943300580312 30-34 21.149682727577897 29.090734884201343 29.37878752872712 20.38079485949364 35-39 21.031862833401423 29.627343590147966 29.174141298237288 20.16665227821332 40-44 21.05374748224319 29.44627018622566 28.95026190107288 20.549720430458265 45-49 21.04940205311293 29.16828336682253 29.275987874578952 20.50632670548559 50-54 21.235136865195155 29.22239422014496 28.763911785451697 20.778557129208192 55-59 21.369243993843497 29.297200694475116 28.980541785725205 20.353013525956175 60-64 21.33933036879186 29.495466208576147 28.77911085500565 20.38609256762634 65-69 21.25521277644284 29.55473457748896 28.80892094253116 20.381131703537044 70-74 21.215360506254104 29.694654621022977 28.509616626141508 20.58036824658141 75-79 21.66283635296148 29.19188308731892 28.71267482743202 20.432605732287573 80-84 21.56447340786702 29.458478699854073 28.54893116950467 20.428116722774238 85-89 21.39204414120181 29.533705527711984 28.537999450682435 20.536250880403774 90-94 21.45993611648914 29.360097219360366 28.61320281892622 20.566763845224276 95-99 21.39925053504075 29.274275349510106 28.701231069619205 20.625243045829944 100-104 21.61035012370625 29.397283017739046 28.5665916293123 20.425775229242404 105-109 21.520386650522237 29.256320497331885 28.81679039002943 20.40650246211645 110-114 21.70881026071804 29.3847076046046 28.50085428959398 20.405627845083384 115-119 21.691752570314147 29.31578339369806 28.50422326567501 20.48824077031279 120-124 21.66715486617104 29.33859274850431 28.650129503130707 20.34412288219395 125-129 21.975750680181257 29.333874351848266 28.212960112118612 20.47741485585187 130-134 22.06564442568773 29.179944178384513 28.31312569105923 20.441285704868523 135-139 22.44471170679341 29.10221833037479 27.90681231180497 20.546257651026835 140-144 22.46895419060645 29.357493820748687 27.72383301202133 20.449718976623533 145-149 22.507781755988333 29.361641092294104 27.615156053183092 20.515421098534468 150-151 22.902002236414123 28.775478296926458 27.782857104013647 20.539662362645768 >>END_MODULE >>Per base GC content warn #Base %GC 1 47.410271919749356 2 36.11542421081601 3 36.862008276649384 4 42.97620908281631 5 39.22418040167028 6 40.37258426813562 7 40.92379412044525 8 40.27378084621318 9 40.463166192129705 10-14 40.372409968986226 15-19 40.73177858414536 20-24 40.970291243663446 25-29 41.11564126608771 30-34 41.53047758707154 35-39 41.198515111614746 40-44 41.603467912701454 45-49 41.555728758598526 50-54 42.01369399440335 55-59 41.722257519799676 60-64 41.72542293641819 65-69 41.63634447997988 70-74 41.795728752835515 75-79 42.095442085249054 80-84 41.992590130641254 85-89 41.928295021605585 90-94 42.02669996171341 95-99 42.0244935808707 100-104 42.03612535294866 105-109 41.92688911263868 110-114 42.11443810580142 115-119 42.17999334062693 120-124 42.01127774836498 125-129 42.45316553603312 130-134 42.506930130556256 135-139 42.99096935782025 140-144 42.91867316722998 145-149 43.0232028545228 150-151 43.44166459905989 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 9.0 1 10.5 2 11.5 3 14.0 4 23.0 5 31.0 6 36.0 7 42.5 8 62.0 9 81.5 10 87.5 11 100.5 12 127.0 13 160.5 14 215.0 15 288.0 16 368.5 17 486.5 18 643.0 19 814.0 20 1050.5 21 1383.0 22 1756.0 23 2166.5 24 2648.0 25 3185.0 26 3864.0 27 4533.0 28 5251.5 29 6104.0 30 7047.5 31 8052.5 32 9065.0 33 9795.0 34 9907.0 35 10070.0 36 10553.5 37 10990.5 38 11422.5 39 11671.5 40 11413.5 41 10981.0 42 10634.0 43 10403.0 44 9973.5 45 9517.5 46 8989.5 47 8313.5 48 7791.0 49 7099.5 50 6318.5 51 5591.5 52 4893.0 53 4318.5 54 3783.0 55 3291.5 56 2921.0 57 2537.0 58 2297.0 59 2203.5 60 2204.0 61 2305.5 62 2577.0 63 2789.5 64 2850.0 65 2808.0 66 2503.5 67 2114.5 68 1629.5 69 1146.5 70 825.0 71 554.5 72 357.5 73 269.0 74 214.0 75 157.5 76 108.5 77 80.5 78 71.5 79 54.0 80 39.5 81 38.5 82 30.0 83 27.0 84 22.0 85 14.5 86 14.5 87 11.0 88 6.0 89 4.5 90 1.5 91 3.0 92 7.0 93 5.0 94 5.0 95 12.5 96 19.0 97 27.0 98 59.0 99 242.5 100 460.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015629034669276037 2 3.3976162324513123E-4 3 6.795232464902625E-4 4 0.003397616232451312 5 0.0010192848697353936 6 0.018686889278482218 7 0.0054361859719221 8 3.3976162324513123E-4 9 6.795232464902625E-4 10-14 0.0010872371943844198 15-19 0.0 20-24 0.0 25-29 0.0 30-34 9.513325450863674E-4 35-39 0.03621858903793099 40-44 0.004892567374729889 45-49 6.795232464902624E-5 50-54 0.0017667604408746823 55-59 3.3976162324513123E-4 60-64 2.7180929859610495E-4 65-69 0.032277354208287465 70-74 0.007202946412796781 75-79 0.0017667604408746823 80-84 0.023035838056019897 85-89 0.047838436552914476 90-94 0.07685407917804868 95-99 0.047838436552914476 100-104 0.054158002745273916 105-109 0.049673149318438185 110-114 0.015085416072083826 115-119 6.795232464902625E-4 120-124 0.015425177695328958 125-129 0.021812696212337425 130-134 0.009988991723406858 135-139 0.0502167679156304 140-144 0.038596920400646904 145-149 0.03744173088161346 150-151 0.03499544719424852 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 294324.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 7.2470367192779825 #Duplication Level Relative count 1 100.0 2 2.8023377791098456 3 0.23512146219711963 4 0.09611558674431704 5 0.050641545703995 6 0.03152177844840505 7 0.0253207728519975 8 0.019119767255589948 9 0.019636517721957243 10++ 0.07027806342595225 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 522 0.17735556733395852 No Hit GATCTGGTTTTATTACATTCTGAATTGGACGTTGAAAATGAGCTTATCTC 350 0.11891656813579593 No Hit TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 333 0.11314062054062869 No Hit GATCCAGCCATAAAATGCATCATTCTTTTTTGTTTTAGACAACATTTCAT 314 0.1066851496989712 No Hit >>END_MODULE >>Kmer Content fail #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GGGGG 258235 13.3426485 27.289558 145-147 GATCG 111835 3.2728577 6.946312 1 GCCCC 51625 3.2360926 4.098945 9 GGGGC 56200 3.047521 4.17873 140-144 GGCCC 50555 3.0195446 3.5998313 4 CCTGG 65295 2.767748 5.1095357 4 CCAGC 59305 2.56658 11.069646 4 TCCAG 69935 2.1479661 9.278083 3 CAGCC 43080 1.8644005 6.488441 5 GATCC 54845 1.6844956 22.028505 1 GATCT 74055 1.6141968 21.736237 1 ATCTG 65635 1.4306638 11.229665 2 TCTGG 44595 1.3415353 6.9648232 3 ATCCA 59530 1.324814 9.322675 2 GATCA 60430 1.2814101 18.68345 1 ATCAG 56470 1.1974388 5.984301 2 CTGGT 37950 1.1416361 5.5498414 4 ATCAA 64890 0.9970099 5.2620416 2 >>END_MODULE