PeakID (cmd=annotatePeaks.pl Nup98-S2-pascual-garcia2017_R1_peaks.narrowPeak dm3.fa -gid -gtf Drosophila_melanogaster.BDGP5.78.chr.gtf -cpu 6) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type Nup98-S2-pascual-garcia2017_R1_peak_6840 chrU 5630776 5631218 + 1316 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1511 chr2L 20148436 20148655 + 1030 NA Intergenic Intergenic -13622 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6882 chrUextra 439328 439729 + 862 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1567 chr2L 20638591 20638754 + 862 NA promoter-TSS (FBgn0262688) pseudogene-promoter-TSS (FBgn0262688) -343 FBgn0262688 FBgn0262688 FBtr0305612 CR43158 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4804 chr3R 3300272 3300748 + 766 NA exon (FBgn0065099, exon 1 of 1) snRNA-exon (FBgn0065099, exon 1 of 1) 208 FBgn0065099 FBgn0065099 FBtr0091929 snRNA:7SK snRNA Nup98-S2-pascual-garcia2017_R1_peak_2420 chr2R 8878651 8878809 + 760 NA Intergenic Intergenic -2672 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1671 chr2L 21828349 21828559 + 760 NA promoter-TSS (FBgn0003866) protein_coding-promoter-TSS (FBgn0003866) -139 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2057 chr2R 3239907 3240284 + 760 NA intron (FBgn0033159, intron 5 of 23) protein_coding-intron (FBgn0033159, intron 6 of 23) 29279 FBgn0033159 FBgn0033159 FBtr0306787 Dscam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3436 chr3L 673409 673701 + 734 NA Intergenic Intergenic 6771 FBgn0035151 FBgn0035151 FBtr0072614 CG17129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1694 chr2L 21899242 21899447 + 710 NA Intergenic Intergenic -1055 FBgn0032965 FBgn0032965 FBtr0085950 CG11629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4327 chr3L 17964348 17964541 + 672 NA promoter-TSS (FBgn0000568) protein_coding-promoter-TSS (FBgn0000568) 31734 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2424 chr2R 8922585 8922743 + 672 NA Intergenic Intergenic 12129 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4992 chr3R 6447886 6448349 + 668 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -16725 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6960 chrUextra 26599298 26599568 + 648 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2323 chr2R 7417055 7417297 + 611 NA Intergenic Intergenic -1788 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6962 chrUextra 27346736 27347298 + 596 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6854 chrU 7458005 7458196 + 588 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_466 chr2L 7188726 7188909 + 566 NA promoter-TSS (FBgn0031894) protein_coding-promoter-TSS (FBgn0031894) -749 FBgn0031894 FBgn0031894 FBtr0079419 CG4496 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1188 chr2L 16533427 16533568 + 556 NA promoter-TSS (FBgn0032587) protein_coding-promoter-TSS (FBgn0032587) -4575 FBgn0086038 FBgn0086038 FBtr0114314 snoRNA:Me28S-C1237 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_761 chr2L 11829361 11829476 + 533 NA promoter-TSS (FBgn0000588) protein_coding-promoter-TSS (FBgn0000588) -13 FBgn0000588 FBgn0000588 FBtr0080325 esc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6388 chr3R 25878293 25878414 + 528 NA promoter-TSS (FBgn0039742) protein_coding-promoter-TSS (FBgn0039742) -53 FBgn0039743 FBgn0039743 FBtr0310420 CG7946 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1141 chr2L 16049687 16049853 + 525 NA promoter-TSS (FBgn0013433) protein_coding-promoter-TSS (FBgn0013433) -225 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6902 chrUextra 3783734 3783827 + 523 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3057 chr2R 19634321 19634474 + 517 NA promoter-TSS (FBgn0034899) protein_coding-promoter-TSS (FBgn0034899) -49 FBgn0000562 FBgn0000562 FBtr0114586 egl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2073 chr2R 3420955 3421071 + 505 NA promoter-TSS (FBgn0264294) protein_coding-promoter-TSS (FBgn0264294) -1501 FBgn0264294 FBgn0264294 FBtr0088906 Cyt-b5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_167 chr2L 2161614 2161784 + 503 NA promoter-TSS (FBgn0000097) protein_coding-promoter-TSS (FBgn0000097) 5939 FBgn0031393 FBgn0031393 FBtr0077832 CG15382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2599 chr2R 11735537 11735686 + 496 NA promoter-TSS (FBgn0034046) protein_coding-promoter-TSS (FBgn0034046) -500 FBgn0034046 FBgn0034046 FBtr0087287 tun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3698 chr3L 6957901 6958008 + 485 NA promoter-TSS (FBgn0261445) protein_coding-promoter-TSS (FBgn0261445) -96 FBgn0261445 FBgn0261445 FBtr0076938 sgl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2865 chr2R 16174552 16174672 + 484 NA promoter-TSS (FBgn0034498) protein_coding-promoter-TSS (FBgn0034498) -28 FBgn0034498 FBgn0034498 FBtr0086302 CG16868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3554 chr3L 3418432 3418569 + 475 NA promoter-TSS (FBgn0014388) protein_coding-promoter-TSS (FBgn0014388) -573 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5890 chr3R 19883069 19883199 + 470 NA promoter-TSS (FBgn0040283) protein_coding-promoter-TSS (FBgn0040283) -105 FBgn0001230 FBgn0001230 FBtr0084589 Hsp68 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3577 chr3L 4233979 4234111 + 458 NA intron (FBgn0001257, intron 1 of 2) protein_coding-intron (FBgn0001257, intron 1 of 2) -6263 FBgn0035515 FBgn0035515 FBtr0073226 CG14997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6912 chrUextra 8133659 8133744 + 458 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6400 chr3R 26253873 26253973 + 456 NA promoter-TSS (FBgn0039768) protein_coding-promoter-TSS (FBgn0039768) 75 FBgn0039767 FBgn0039767 FBtr0085627 CG2218 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1402 chr2L 18936191 18936365 + 455 NA intron (FBgn0032723, intron 6 of 10) protein_coding-intron (FBgn0032723, intron 6 of 10) 7670 FBgn0032723 FBgn0032723 FBtr0081193 ssp3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6104 chr3R 23384826 23384964 + 450 NA promoter-TSS (FBgn0004387) protein_coding-promoter-TSS (FBgn0004387) -33 FBgn0004387 FBgn0004387 FBtr0304671 Klp98A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2163 chr2R 4834814 4834947 + 445 NA promoter-TSS (FBgn0027607) protein_coding-promoter-TSS (FBgn0027607) -14 FBgn0027607 FBgn0027607 FBtr0088674 CG8230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3561 chr3L 3787990 3788117 + 442 NA promoter-TSS (FBgn0052264) protein_coding-promoter-TSS (FBgn0052264) -2751 FBgn0052266 FBgn0052266 FBtr0073147 CG32266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5756 chr3R 16782733 16782929 + 436 NA promoter-TSS (FBgn0002921) protein_coding-promoter-TSS (FBgn0002921) 8395 FBgn0002921 FBgn0002921 FBtr0089516 Atpalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5832 chr3R 18273654 18273787 + 433 NA promoter-TSS (FBgn0085405) protein_coding-promoter-TSS (FBgn0085405) -42 FBgn0085405 FBgn0085405 FBtr0112608 CG34376 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4934 chr3R 5618943 5619063 + 431 NA promoter-TSS (FBgn0037757) protein_coding-promoter-TSS (FBgn0037757) -27 FBgn0037757 FBgn0037757 FBtr0082141 CG8516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_175 chr2L 2376298 2376447 + 419 NA promoter-TSS (FBgn0031420) protein_coding-promoter-TSS (FBgn0031420) 531 FBgn0031420 FBgn0031420 FBtr0331437 CG9866 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3433 chr3L 627923 628562 + 417 NA promoter-TSS (FBgn0263039) ncRNA-promoter-TSS (FBgn0263039) -228 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5521 chr3R 13947563 13947801 + 409 NA promoter-TSS (FBgn0003499) protein_coding-promoter-TSS (FBgn0003499) 12967 FBgn0051518 FBgn0051518 FBtr0083545 tRNA:CR31518 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4178 chr3L 16004856 16005025 + 407 NA promoter-TSS (FBgn0263601) protein_coding-promoter-TSS (FBgn0263601) -1531 FBgn0263601 FBgn0263601 FBtr0333578 mib1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4661 chr3R 1511116 1511262 + 406 NA promoter-TSS (FBgn0037364) protein_coding-promoter-TSS (FBgn0037364) -41 FBgn0037364 FBgn0037364 FBtr0078727 Rab23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6453 chr3R 26912180 26912445 + 406 NA Intergenic Intergenic 10728 FBgn0039816 FBgn0039816 FBtr0085741 CG11317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7090 chrX 7200689 7200885 + 401 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -1187 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4636 chr3R 1043127 1043308 + 400 NA promoter-TSS (FBgn0259212) protein_coding-promoter-TSS (FBgn0259212) -70 FBgn0259212 FBgn0259212 FBtr0299710 cno protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6921 chrUextra 11426196 11426277 + 393 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5592 chr3R 14809605 14809772 + 392 NA promoter-TSS (FBgn0261792) protein_coding-promoter-TSS (FBgn0261792) -59 FBgn0026239 FBgn0026239 FBtr0112924 gukh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2945 chr2R 17572723 17572820 + 391 NA promoter-TSS (FBgn0034654) protein_coding-promoter-TSS (FBgn0034654) -17 FBgn0034654 FBgn0034654 FBtr0071670 CG10306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_848 chr2L 13019113 13019219 + 388 NA TTS (FBgn0028965) protein_coding-TTS (FBgn0028965) 268 FBgn0032467 FBgn0032467 FBtr0301247 CG9934 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7088 chrX 7195139 7195279 + 386 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -6765 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7156 chrX 12629240 12629507 + 383 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 7104 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3778 chr3L 8417953 8418086 + 382 NA promoter-TSS (FBgn0020224) protein_coding-promoter-TSS (FBgn0020224) -35 FBgn0020224 FBgn0020224 FBtr0076614 Cbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7188 chrX 13457658 13457879 + 380 NA promoter-TSS (FBgn0086674) protein_coding-promoter-TSS (FBgn0086674) -88 FBgn0086674 FBgn0086674 FBtr0330399 Tango13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6894 chrUextra 1067753 1067836 + 377 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3676 chr3L 6736737 6736917 + 377 NA promoter-TSS (FBgn0261934) protein_coding-promoter-TSS (FBgn0261934) -563 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4379 chr3L 19056181 19056315 + 374 NA promoter-TSS (FBgn0036843) protein_coding-promoter-TSS (FBgn0036843) -17 FBgn0036843 FBgn0036843 FBtr0075025 CG6812 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2271 chr2R 6446372 6446549 + 371 NA intron (FBgn0263102, intron 1 of 10) protein_coding-intron (FBgn0263102, intron 1 of 9) 1067 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7184 chrX 13290160 13290296 + 370 NA promoter-TSS (FBgn0030482) protein_coding-promoter-TSS (FBgn0030482) -698 FBgn0030482 FBgn0030482 FBtr0073777 CG1673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3479 chr3L 1576563 1576693 + 370 NA promoter-TSS (FBgn0035237) protein_coding-promoter-TSS (FBgn0035237) -71 FBgn0035237 FBgn0035237 FBtr0303993 CG13917 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_494 chr2L 7984149 7984310 + 367 NA promoter-TSS (FBgn0085450) protein_coding-promoter-TSS (FBgn0085450) -1054 FBgn0031968 FBgn0031968 FBtr0306336 CG7231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2734 chr2R 14071570 14071696 + 364 NA promoter-TSS (FBgn0034315) protein_coding-promoter-TSS (FBgn0034315) -38 FBgn0034315 FBgn0034315 FBtr0086771 CG5721 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5324 chr3R 11818926 11819078 + 362 NA promoter-TSS (FBgn0003507) protein_coding-promoter-TSS (FBgn0003507) 7079 FBgn0003507 FBgn0003507 FBtr0083216 srp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_735 chr2L 11446085 11446344 + 361 NA promoter-TSS (FBgn0261648) protein_coding-promoter-TSS (FBgn0261648) -611 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6918 chrUextra 9037083 9037300 + 350 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5150 chr3R 8823704 8823816 + 342 NA promoter-TSS (FBgn0038107) protein_coding-promoter-TSS (FBgn0038107) -51 FBgn0038108 FBgn0038108 FBtr0306257 CG7518 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2748 chr2R 14230264 14230465 + 341 NA intron (FBgn0010575, intron 1 of 10) protein_coding-intron (FBgn0010575, intron 1 of 11) 14437 FBgn0010575 FBgn0010575 FBtr0329996 sbb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6910 chrUextra 7039418 7039718 + 340 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6897 chrUextra 2684517 2684852 + 338 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3421 chr3L 617040 617154 + 334 NA promoter-TSS (FBgn0261636) protein_coding-promoter-TSS (FBgn0261636) -451 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2461 chr2R 9370683 9370806 + 330 NA promoter-TSS (FBgn0000119) protein_coding-promoter-TSS (FBgn0000119) -21 FBgn0000119 FBgn0000119 FBtr0087702 arr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6003 chr3R 22287124 22287300 + 330 NA promoter-TSS (FBgn0039430) protein_coding-promoter-TSS (FBgn0039430) 3137 FBgn0039429 FBgn0039429 FBtr0085014 CG14238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6901 chrUextra 3783472 3783623 + 329 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7274 chrX 21229246 21229355 + 325 NA promoter-TSS (FBgn0011710) protein_coding-promoter-TSS (FBgn0011710) -3 FBgn0011710 FBgn0011710 FBtr0077198 Sep1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6903 chrUextra 3809369 3809785 + 323 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3892 chr3L 10731591 10731770 + 322 NA Intergenic Intergenic -33412 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_435 chr2L 6677586 6677668 + 321 NA promoter-TSS (FBgn0031848) protein_coding-promoter-TSS (FBgn0031848) -2 FBgn0031848 FBgn0031848 FBtr0079319 CG11329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2493 chr2R 9829600 9829790 + 319 NA promoter-TSS (FBgn0013733) protein_coding-promoter-TSS (FBgn0013733) 1187 FBgn0033885 FBgn0033885 FBtr0087615 DJ-1alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3420 chr3L 616582 616992 + 319 NA promoter-TSS (FBgn0261636) protein_coding-promoter-TSS (FBgn0261636) -141 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6051 chr3R 22738540 22738666 + 318 NA promoter-TSS (FBgn0004510) protein_coding-promoter-TSS (FBgn0004510) 5 FBgn0004510 FBgn0004510 FBtr0330167 Ets97D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5527 chr3R 14009166 14009261 + 314 NA promoter-TSS (FBgn0261532) protein_coding-promoter-TSS (FBgn0261532) -12 FBgn0261532 FBgn0261532 FBtr0083619 cdm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1407 chr2L 19054344 19054450 + 313 NA TTS (FBgn0261396) protein_coding-TTS (FBgn0261396) 316 FBgn0032748 FBgn0032748 FBtr0113043 CG10492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6935 chrUextra 17026080 17026215 + 313 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3835 chr3L 9847169 9847297 + 300 NA intron (FBgn0004390, intron 1 of 4) protein_coding-intron (FBgn0004390, intron 1 of 4) 1152 FBgn0004390 FBgn0004390 FBtr0330168 Gap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6228 chr3R 24521884 24521978 + 300 NA promoter-TSS (FBgn0027655) protein_coding-promoter-TSS (FBgn0027655) -33 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2992 chr2R 18573620 18573738 + 299 NA exon (FBgn0020257, exon 1 of 1) protein_coding-exon (FBgn0020257, exon 1 of 1) 2799 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6900 chrUextra 3204765 3204908 + 298 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5193 chr3R 9508899 9509014 + 296 NA promoter-TSS (FBgn0024555) protein_coding-promoter-TSS (FBgn0024555) -724 FBgn0024555 FBgn0024555 FBtr0114604 flfl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_630 chr2L 9330641 9330755 + 296 NA promoter-TSS (FBgn0010314) protein_coding-promoter-TSS (FBgn0010314) -69 FBgn0010314 FBgn0010314 FBtr0079799 Cks30A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3927 chr3L 11701115 11701246 + 295 NA promoter-TSS (FBgn0036196) protein_coding-promoter-TSS (FBgn0036196) 473 FBgn0036196 FBgn0036196 FBtr0076125 CG11658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6409 chr3R 26388784 26388913 + 294 NA promoter-TSS (FBgn0082582) protein_coding-promoter-TSS (FBgn0082582) -2927 FBgn0083991 FBgn0083991 FBtr0111047 CG34155 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2281 chr2R 6670355 6670492 + 294 NA promoter-TSS (FBgn0053144) protein_coding-promoter-TSS (FBgn0053144) -8541 FBgn0050018 FBgn0050018 FBtr0304706 mthl13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2998 chr2R 18686490 18686611 + 293 NA promoter-TSS (FBgn0011211) protein_coding-promoter-TSS (FBgn0011211) -11 FBgn0011211 FBgn0011211 FBtr0071883 blw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5880 chr3R 19646226 19646398 + 290 NA promoter-TSS (FBgn0085384) protein_coding-promoter-TSS (FBgn0085384) -2 FBgn0085384 FBgn0085384 FBtr0306734 CG34355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2322 chr2R 7415718 7415974 + 290 NA promoter-TSS (FBgn0000577) protein_coding-promoter-TSS (FBgn0000577) -458 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2423 chr2R 8903135 8903547 + 290 NA Intergenic Intergenic 19335 FBgn0008654 FBgn0008654 FBtr0087793 Su(z)2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3410 chr3L 432683 432834 + 290 NA TTS (FBgn0035139) protein_coding-TTS (FBgn0035139) 1148 FBgn0035139 FBgn0035139 FBtr0072566 CG13891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7161 chrX 12647981 12648233 + 290 NA Intergenic Intergenic 6543 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2303 chr2R 7254056 7254189 + 288 NA promoter-TSS (FBgn0033627) protein_coding-promoter-TSS (FBgn0033627) -1662 FBgn0033627 FBgn0033627 FBtr0088129 CG13204 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3405 chr3L 361424 361511 + 287 NA promoter-TSS (FBgn0035137) protein_coding-promoter-TSS (FBgn0035137) -5 FBgn0035137 FBgn0035137 FBtr0072549 CG1233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_393 chr2L 5800238 5800347 + 286 NA promoter-TSS (FBgn0031738) protein_coding-promoter-TSS (FBgn0031738) 1683 FBgn0031739 FBgn0031739 FBtr0332037 CG14005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4215 chr3L 16404902 16405002 + 285 NA promoter-TSS (FBgn0028399) protein_coding-promoter-TSS (FBgn0028399) -870 FBgn0028399 FBgn0028399 FBtr0331174 TMS1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7100 chrX 8036259 8036364 + 284 NA promoter-TSS (FBgn0025800) protein_coding-promoter-TSS (FBgn0025800) -10 FBgn0025800 FBgn0025800 FBtr0071192 Smox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7163 chrX 12650443 12650610 + 283 NA TTS (FBgn0020513) protein_coding-TTS (FBgn0020513) 4124 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5400 chr3R 12589754 12590048 + 283 NA promoter-TSS (FBgn0084245) ncRNA-promoter-TSS (FBgn0084245) -460 FBgn0084245 FBgn0084245 FBtr0113490 tre-3 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3826 chr3L 9328922 9329045 + 283 NA promoter-TSS (FBgn0035975) protein_coding-promoter-TSS (FBgn0035975) 194 FBgn0035975 FBgn0035975 FBtr0076433 PGRP-LA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2378 chr2R 8088310 8088406 + 279 NA promoter-TSS (FBgn0033699) protein_coding-promoter-TSS (FBgn0033699) -25 FBgn0033699 FBgn0033699 FBtr0088007 RpS11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4392 chr3L 19591838 19591928 + 278 NA promoter-TSS (FBgn0010417) protein_coding-promoter-TSS (FBgn0010417) -28 FBgn0005386 FBgn0005386 FBtr0306010 ash1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2069 chr2R 3354238 3354369 + 271 NA promoter-TSS (FBgn0033179) protein_coding-promoter-TSS (FBgn0033179) -67 FBgn0033179 FBgn0033179 FBtr0088997 p47 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3556 chr3L 3460520 3460621 + 271 NA promoter-TSS (FBgn0026259) protein_coding-promoter-TSS (FBgn0026259) 407 FBgn0026259 FBgn0026259 FBtr0073144 eIF5B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6943 chrUextra 19603896 19604040 + 270 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3700 chr3L 6973122 6973306 + 268 NA promoter-TSS (FBgn0001104) protein_coding-promoter-TSS (FBgn0001104) -61 FBgn0001104 FBgn0001104 FBtr0076934 G-ialpha65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2311 chr2R 7357043 7357165 + 268 NA Intergenic Intergenic -6106 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5426 chr3R 12774362 12774587 + 268 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -17139 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1508 chr2L 20120961 20121259 + 268 NA Intergenic Intergenic 13813 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5046 chr3R 7179190 7179508 + 268 NA promoter-TSS (FBgn0026064) protein_coding-promoter-TSS (FBgn0026064) -496 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3994 chr3L 12686113 12686304 + 268 NA promoter-TSS (FBgn0014343) protein_coding-promoter-TSS (FBgn0014343) -531 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2092 chr2R 3906386 3906686 + 267 NA Intergenic Intergenic 3726 FBgn0263572 FBgn0263572 FBtr0309728 mir-4981 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5865 chr3R 19182231 19182318 + 267 NA promoter-TSS (FBgn0024509) protein_coding-promoter-TSS (FBgn0024509) -11 FBgn0024509 FBgn0024509 FBtr0084409 sec13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3652 chr3L 6186237 6186371 + 266 NA promoter-TSS (FBgn0024921) protein_coding-promoter-TSS (FBgn0024921) -25 FBgn0035692 FBgn0035692 FBtr0077015 CG13298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2060 chr2R 3295343 3295456 + 263 NA promoter-TSS (FBgn0033166) protein_coding-promoter-TSS (FBgn0033166) -75 FBgn0033166 FBgn0033166 FBtr0089009 Eaf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2331 chr2R 7489139 7489377 + 262 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 3183 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4293 chr3L 17556622 17556839 + 261 NA intron (FBgn0000567, intron 7 of 7) protein_coding-intron (FBgn0000567, intron 7 of 7) 2532 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1613 chr2L 21262927 21263003 + 259 NA promoter-TSS (FBgn0032938) protein_coding-promoter-TSS (FBgn0032938) 2 FBgn0032938 FBgn0032938 FBtr0330680 CG8671 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1441 chr2L 19398898 19399001 + 258 NA promoter-TSS (FBgn0032775) protein_coding-promoter-TSS (FBgn0032775) -457 FBgn0032775 FBgn0032775 FBtr0300822 CG17544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3727 chr3L 7316468 7316565 + 258 NA promoter-TSS (FBgn0035762) protein_coding-promoter-TSS (FBgn0035762) -203 FBgn0035762 FBgn0035762 FBtr0076838 CG8605 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5894 chr3R 20120649 20120809 + 256 NA promoter-TSS (FBgn0259685) protein_coding-promoter-TSS (FBgn0259685) -71 FBgn0259685 FBgn0259685 FBtr0304726 crb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7079 chrX 6418367 6418526 + 253 NA promoter-TSS (FBgn0029873) protein_coding-promoter-TSS (FBgn0029873) -51 FBgn0029873 FBgn0029873 FBtr0070912 CG3918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2605 chr2R 11809604 11809743 + 253 NA promoter-TSS (FBgn0264089) protein_coding-promoter-TSS (FBgn0264089) -50 FBgn0264089 FBgn0264089 FBtr0330733 sli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2183 chr2R 4990689 4990784 + 253 NA promoter-TSS (FBgn0015838) protein_coding-promoter-TSS (FBgn0015838) -13 FBgn0015838 FBgn0015838 FBtr0330624 Vang protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6911 chrUextra 8133444 8133616 + 253 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2244 chr2R 6115601 6115710 + 253 NA promoter-TSS (FBgn0000448) protein_coding-promoter-TSS (FBgn0000448) -197 FBgn0000448 FBgn0000448 FBtr0306346 Hr46 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5265 chr3R 11112474 11112647 + 253 NA intron (FBgn0003721, intron 4 of 11) protein_coding-intron (FBgn0003721, intron 3 of 9) 5288 FBgn0003721 FBgn0003721 FBtr0305656 Tm1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4979 chr3R 6361576 6361744 + 253 NA intron (FBgn0001235, intron 7 of 12) protein_coding-intron (FBgn0001235, intron 6 of 11) -22882 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4991 chr3R 6442953 6443120 + 253 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -11644 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_152 chr2L 1884482 1884682 + 252 NA promoter-TSS (FBgn0031374) protein_coding-promoter-TSS (FBgn0031374) -40 FBgn0031374 FBgn0031374 FBtr0110882 CG7337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5007 chr3R 6678094 6678224 + 249 NA promoter-TSS (FBgn0037841) protein_coding-promoter-TSS (FBgn0037841) -287 FBgn0037841 FBgn0037841 FBtr0113216 CG4565 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_45 chr2L 851016 851155 + 248 NA promoter-TSS (FBgn0020304) protein_coding-promoter-TSS (FBgn0020304) -14 FBgn0020304 FBgn0020304 FBtr0290075 drongo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5325 chr3R 11876457 11876565 + 248 NA promoter-TSS (FBgn0027948) protein_coding-promoter-TSS (FBgn0027948) -1089 FBgn0027948 FBgn0027948 FBtr0304803 msps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6972 chrUextra 28689515 28689585 + 248 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4890 chr3R 4541896 4542009 + 247 NA promoter-TSS (FBgn0037614) protein_coding-promoter-TSS (FBgn0037614) -4 FBgn0037614 FBgn0037614 FBtr0300544 CG8116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3929 chr3L 11702046 11702138 + 247 NA promoter-TSS (FBgn0036196) protein_coding-promoter-TSS (FBgn0036196) 13 FBgn0261353 FBgn0261353 FBtr0302271 CG42630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3802 chr3L 8961583 8961674 + 244 NA promoter-TSS (FBgn0035945) protein_coding-promoter-TSS (FBgn0035945) 0 FBgn0035945 FBgn0035945 FBtr0301141 CG5026 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2656 chr2R 12476715 12476822 + 242 NA promoter-TSS (FBgn0034141) protein_coding-promoter-TSS (FBgn0034141) -82 FBgn0034141 FBgn0034141 FBtr0087121 CG8311 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4408 chr3L 20219425 20219530 + 241 NA promoter-TSS (FBgn0260397) protein_coding-promoter-TSS (FBgn0260397) -4 FBgn0260397 FBgn0260397 FBtr0332693 Su(var)3-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2422 chr2R 8896728 8897071 + 239 NA Intergenic Intergenic 12893 FBgn0008654 FBgn0008654 FBtr0087793 Su(z)2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5471 chr3R 13443793 13443968 + 238 NA promoter-TSS (FBgn0038528) protein_coding-promoter-TSS (FBgn0038528) 23 FBgn0011944 FBgn0011944 FBtr0083501 tRNA:P:90Ca tRNA Nup98-S2-pascual-garcia2017_R1_peak_3402 chr3L 282338 282610 + 238 NA exon (FBgn0264707, exon 5 of 16) protein_coding-exon (FBgn0264707, exon 5 of 16) 5037 FBgn0264707 FBgn0264707 FBtr0333957 RhoGEF3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6428 chr3R 26738150 26738424 + 238 NA promoter-TSS (FBgn0020912) protein_coding-promoter-TSS (FBgn0020912) -323 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4296 chr3L 17570818 17570967 + 237 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -11630 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2238 chr2R 6029745 6029902 + 236 NA promoter-TSS (FBgn0033491) protein_coding-promoter-TSS (FBgn0033491) -22 FBgn0033491 FBgn0033491 FBtr0088332 CG18011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4773 chr3R 2956646 2956805 + 235 NA promoter-TSS (FBgn0051493) protein_coding-promoter-TSS (FBgn0051493) 15 FBgn0051491 FBgn0051491 FBtr0081610 tRNA:CR31491 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3924 chr3L 11549317 11549408 + 233 NA intron (FBgn0259481, intron 1 of 3) protein_coding-intron (FBgn0259481, intron 1 of 3) -3617 FBgn0263569 FBgn0263569 FBtr0309721 mir-4968 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5349 chr3R 12070550 12070636 + 232 NA intron (FBgn0040071, intron 1 of 1) protein_coding-intron (FBgn0040071, intron 1 of 1) 2052 FBgn0040071 FBgn0040071 FBtr0083258 tara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5913 chr3R 20859166 20859256 + 232 NA promoter-TSS (FBgn0039260) protein_coding-promoter-TSS (FBgn0039260) -34 FBgn0039260 FBgn0039260 FBtr0084796 Smg6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3909 chr3L 11116290 11116453 + 231 NA promoter-TSS (FBgn0036136) protein_coding-promoter-TSS (FBgn0036136) -55 FBgn0036136 FBgn0036136 FBtr0076223 Ufd1-like protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6417 chr3R 26634206 26634350 + 231 NA promoter-TSS (FBgn0027598) protein_coding-promoter-TSS (FBgn0027598) -60 FBgn0027598 FBgn0027598 FBtr0310072 cindr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2107 chr2R 4044122 4044207 + 230 NA promoter-TSS (FBgn0010504) protein_coding-promoter-TSS (FBgn0010504) -36 FBgn0263593 FBgn0263593 FBtr0303577 Lpin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2990 chr2R 18565633 18565818 + 229 NA Intergenic Intergenic 7468 FBgn0034763 FBgn0034763 FBtr0071868 RYBP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3559 chr3L 3515708 3515812 + 229 NA promoter-TSS (FBgn0005640) protein_coding-promoter-TSS (FBgn0005640) 9 FBgn0005640 FBgn0005640 FBtr0110924 Eip63E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2221 chr2R 5698285 5698412 + 229 NA TTS (FBgn0033446) protein_coding-TTS (FBgn0033446) 1931 FBgn0033446 FBgn0033446 FBtr0088494 CG1648 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5906 chr3R 20594412 20594533 + 229 NA promoter-TSS (FBgn0040600) protein_coding-promoter-TSS (FBgn0040600) -604 FBgn0040600 FBgn0040600 FBtr0084693 CG13631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2058 chr2R 3269427 3269574 + 228 NA promoter-TSS (FBgn0033159) protein_coding-promoter-TSS (FBgn0033159) -126 FBgn0033159 FBgn0033159 FBtr0306787 Dscam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7157 chrX 12629936 12630118 + 228 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 6450 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4292 chr3L 17526479 17526667 + 226 NA promoter-TSS (FBgn0259174) protein_coding-promoter-TSS (FBgn0259174) 3392 FBgn0259174 FBgn0259174 FBtr0299642 Nedd4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5747 chr3R 16656296 16656426 + 224 NA promoter-TSS (FBgn0051223) protein_coding-promoter-TSS (FBgn0051223) -24 FBgn0027493 FBgn0027493 FBtr0310504 CG17273 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6995 chrX 1511010 1511227 + 224 NA intron (FBgn0000210, intron 2 of 8) protein_coding-intron (FBgn0000210, intron 1 of 7) 1070 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3407 chr3L 377931 378407 + 223 NA promoter-TSS (FBgn0262139) protein_coding-promoter-TSS (FBgn0262139) -853 FBgn0262139 FBgn0262139 FBtr0333902 trh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2274 chr2R 6459635 6459880 + 223 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) 14364 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4842 chr3R 4007251 4007465 + 223 NA promoter-TSS (FBgn0001138) protein_coding-promoter-TSS (FBgn0001138) -194 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7254 chrX 18682483 18682582 + 222 NA promoter-TSS (FBgn0004462) protein_coding-promoter-TSS (FBgn0004462) 33 FBgn0004462 FBgn0004462 FBtr0307198 Pk17E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2903 chr2R 16885591 16885745 + 221 NA intron (FBgn0034570, intron 1 of 6) protein_coding-intron (FBgn0034570, intron 1 of 6) 1943 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1447 chr2L 19508728 19508841 + 221 NA promoter-TSS (FBgn0032796) protein_coding-promoter-TSS (FBgn0032796) -24 FBgn0032796 FBgn0032796 FBtr0329963 CG10188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2691 chr2R 13279679 13279805 + 221 NA promoter-TSS (FBgn0011879) tRNA-promoter-TSS (FBgn0011879) 22 FBgn0011879 FBgn0011879 FBtr0086908 tRNA:H:56E tRNA Nup98-S2-pascual-garcia2017_R1_peak_2235 chr2R 5963125 5963210 + 220 NA promoter-TSS (FBgn0033482) protein_coding-promoter-TSS (FBgn0033482) -20 FBgn0033482 FBgn0033482 FBtr0088428 CG1371 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3486 chr3L 1731065 1731181 + 220 NA promoter-TSS (FBgn0027594) protein_coding-promoter-TSS (FBgn0027594) -16 FBgn0027594 FBgn0027594 FBtr0334079 drpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5855 chr3R 18953711 18953806 + 218 NA promoter-TSS (FBgn0051457) protein_coding-promoter-TSS (FBgn0051457) -52 FBgn0051457 FBgn0051457 FBtr0084405 CG31457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7272 chrX 21210672 21210808 + 217 NA promoter-TSS (FBgn0000709) protein_coding-promoter-TSS (FBgn0000709) -83 FBgn0000709 FBgn0000709 FBtr0077192 fliI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6938 chrUextra 17373781 17373874 + 216 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2425 chr2R 8923050 8923195 + 214 NA Intergenic Intergenic 11671 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2878 chr2R 16439569 16439692 + 214 NA promoter-TSS (FBgn0034518) protein_coding-promoter-TSS (FBgn0034518) -39 FBgn0034519 FBgn0034519 FBtr0100677 CG18065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_702 chr2L 10850869 10850975 + 214 NA promoter-TSS (FBgn0004363) protein_coding-promoter-TSS (FBgn0004363) -74 FBgn0004363 FBgn0004363 FBtr0080182 porin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5293 chr3R 11476825 11476934 + 213 NA Intergenic Intergenic 13989 FBgn0263041 FBgn0263041 FBtr0306930 CG43336 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6939 chrUextra 17985647 17985768 + 212 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6963 chrUextra 27485365 27485518 + 212 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5807 chr3R 17681947 17682109 + 212 NA promoter-TSS (FBgn0015229) protein_coding-promoter-TSS (FBgn0015229) -44 FBgn0015229 FBgn0015229 FBtr0084157 glec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2164 chr2R 4839782 4839869 + 212 NA promoter-TSS (FBgn0011300) protein_coding-promoter-TSS (FBgn0011300) -21 FBgn0011300 FBgn0011300 FBtr0300599 babo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5765 chr3R 16927417 16927523 + 211 NA promoter-TSS (FBgn0038855) protein_coding-promoter-TSS (FBgn0038855) -30 FBgn0038854 FBgn0038854 FBtr0084035 CG7044 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2137 chr2R 4532580 4532697 + 211 NA Intergenic Intergenic -4502 FBgn0003892 FBgn0003892 FBtr0089427 ptc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3776 chr3L 8388157 8388304 + 211 NA promoter-TSS (FBgn0035888) protein_coding-promoter-TSS (FBgn0035888) -870 FBgn0035888 FBgn0035888 FBtr0307378 CG7120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5435 chr3R 12882453 12882656 + 211 NA intron (FBgn0020493, intron 2 of 7) protein_coding-intron (FBgn0020493, intron 2 of 7) 2825 FBgn0020493 FBgn0020493 FBtr0083394 Dad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4756 chr3R 2756273 2756454 + 209 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) 2199 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2827 chr2R 15616773 15616863 + 209 NA promoter-TSS (FBgn0050449) tRNA-promoter-TSS (FBgn0050449) 31 FBgn0050449 FBgn0050449 FBtr0086333 tRNA:CR30449 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7027 chrX 3299555 3299755 + 209 NA intron (FBgn0029657, intron 3 of 4) protein_coding-intron (FBgn0029657, intron 2 of 3) 21901 FBgn0052493 FBgn0052493 FBtr0070533 tRNA:CR32493 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1578 chr2L 20770452 20770656 + 209 NA promoter-TSS (FBgn0000251) protein_coding-promoter-TSS (FBgn0000251) -340 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_218 chr2L 3302265 3302354 + 209 NA intron (FBgn0031516, intron 1 of 7) protein_coding-intron (FBgn0031516, intron 1 of 7) 820 FBgn0031516 FBgn0031516 FBtr0077604 CG9663 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3063 chr2R 19727464 19727732 + 208 NA promoter-TSS (FBgn0086659) snoRNA-promoter-TSS (FBgn0086659) -11 FBgn0086659 FBgn0086659 FBtr0091917 snoRNA:Psi18S-176 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3976 chr3L 12461164 12461349 + 207 NA promoter-TSS (FBgn0000625) protein_coding-promoter-TSS (FBgn0000625) -135 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2315 chr2R 7363004 7363236 + 207 NA promoter-TSS (FBgn0001269) protein_coding-promoter-TSS (FBgn0001269) -90 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5203 chr3R 9702975 9703156 + 207 NA Intergenic Intergenic -2427 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6050 chr3R 22707202 22707409 + 205 NA promoter-TSS (FBgn0004359) protein_coding-promoter-TSS (FBgn0004359) -151 FBgn0004359 FBgn0004359 FBtr0085065 T48 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6858 chrU 9143084 9143161 + 203 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1998 chr2R 1930090 1930188 + 202 NA promoter-TSS (FBgn0033055) protein_coding-promoter-TSS (FBgn0033055) -21 FBgn0033055 FBgn0033055 FBtr0085974 tbce protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6377 chr3R 25683202 25683302 + 201 NA promoter-TSS (FBgn0039710) protein_coding-promoter-TSS (FBgn0039710) -61 FBgn0039710 FBgn0039710 FBtr0085527 dgt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6859 chrU 9151294 9151372 + 201 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2762 chr2R 14416341 14416426 + 201 NA intron (FBgn0034356, intron 1 of 1) protein_coding-intron (FBgn0034356, intron 1 of 1) -3530 FBgn0034356 FBgn0034356 FBtr0113093 CG10924 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4302 chr3L 17583965 17584139 + 201 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -24790 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6909 chrUextra 6950249 6950372 + 201 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4297 chr3L 17571260 17571410 + 198 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -12073 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5754 chr3R 16738665 16738768 + 197 NA promoter-TSS (FBgn0263460) snoRNA-promoter-TSS (FBgn0263460) -115 FBgn0263460 FBgn0263460 FBtr0309759 snoRNA:CG31191-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4905 chr3R 5052603 5052868 + 197 NA promoter-TSS (FBgn0003165) protein_coding-promoter-TSS (FBgn0003165) 13254 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2228 chr2R 5817399 5817626 + 196 NA promoter-TSS (FBgn0011656) protein_coding-promoter-TSS (FBgn0011656) 19114 FBgn0033465 FBgn0033465 FBtr0308338 CG12140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4108 chr3L 14530577 14530786 + 196 NA promoter-TSS (FBgn0026409) protein_coding-promoter-TSS (FBgn0026409) -145 FBgn0026409 FBgn0026409 FBtr0308595 Mpcp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5242 chr3R 10482618 10482722 + 196 NA promoter-TSS (FBgn0038250) protein_coding-promoter-TSS (FBgn0038250) -509 FBgn0038250 FBgn0038250 FBtr0082966 CG3505 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6946 chrUextra 22164706 22164886 + 195 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5510 chr3R 13889050 13889156 + 195 NA Intergenic Intergenic -14020 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7231 chrX 17662237 17662540 + 195 NA Intergenic Intergenic -1028 FBgn0024184 FBgn0024184 FBtr0074460 unc-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5652 chr3R 15616655 15616808 + 195 NA promoter-TSS (FBgn0051215) tRNA-promoter-TSS (FBgn0051215) 37 FBgn0051215 FBgn0051215 FBtr0083793 tRNA:CR31215 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5090 chr3R 8070334 8070424 + 195 NA Intergenic Intergenic -5548 FBgn0038007 FBgn0038007 FBtr0082617 Cyp313a3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_101 chr2L 1362381 1362461 + 195 NA promoter-TSS (FBgn0053126) protein_coding-promoter-TSS (FBgn0053126) -689 FBgn0053126 FBgn0053126 FBtr0329947 NLaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2486 chr2R 9710318 9710407 + 195 NA intron (FBgn0000662, intron 1 of 4) protein_coding-intron (FBgn0000662, intron 1 of 3) 1692 FBgn0000662 FBgn0000662 FBtr0304697 fl(2)d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7239 chrX 18176456 18176669 + 195 NA intron (FBgn0053542, intron 3 of 3) protein_coding-intron (FBgn0053542, intron 3 of 3) 5296 FBgn0053542 FBgn0053542 FBtr0113465 upd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2115 chr2R 4214408 4214524 + 194 NA promoter-TSS (FBgn0261588) protein_coding-promoter-TSS (FBgn0261588) -539 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7193 chrX 13739885 13740049 + 194 NA promoter-TSS (FBgn0052626) protein_coding-promoter-TSS (FBgn0052626) -7836 FBgn0052626 FBgn0052626 FBtr0073833 CG32626 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5902 chr3R 20412280 20412536 + 194 NA intron (FBgn0263490, intron 1 of 4) protein_coding-intron (FBgn0263490, intron 1 of 5) 1033 FBgn0263490 FBgn0263490 FBtr0304914 mld protein_coding Nup98-S2-pascual-garcia2017_R1_peak_771 chr2L 12093701 12093797 + 193 NA promoter-TSS (FBgn0032407) protein_coding-promoter-TSS (FBgn0032407) -22 FBgn0032407 FBgn0032407 FBtr0080327 Pex19 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7039 chrX 4000019 4000149 + 193 NA promoter-TSS (FBgn0026084) protein_coding-promoter-TSS (FBgn0026084) 1707 FBgn0000221 FBgn0000221 FBtr0070638 brn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5698 chr3R 16078375 16078502 + 192 NA promoter-TSS (FBgn0262582) protein_coding-promoter-TSS (FBgn0262582) -40549 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2987 chr2R 18457377 18457554 + 191 NA intron (FBgn0260866, intron 1 of 3) protein_coding-intron (FBgn0260866, intron 1 of 3) 7613 FBgn0034737 FBgn0034737 FBtr0071836 CG11362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2295 chr2R 7090436 7090529 + 190 NA intron (FBgn0003396, intron 1 of 6) protein_coding-intron (FBgn0003396, intron 2 of 7) 16287 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3067 chr2R 19844890 19844998 + 189 NA promoter-TSS (FBgn0029105) protein_coding-promoter-TSS (FBgn0029105) -18 FBgn0034940 FBgn0034940 FBtr0072207 CG16787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5351 chr3R 12164263 12164400 + 189 NA promoter-TSS (FBgn0040271) protein_coding-promoter-TSS (FBgn0040271) -71 FBgn0040271 FBgn0040271 FBtr0083273 Sulf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_226 chr2L 3466058 3466168 + 189 NA promoter-TSS (FBgn0021967) protein_coding-promoter-TSS (FBgn0021967) -2 FBgn0005616 FBgn0005616 FBtr0077571 msl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2031 chr2R 2695053 2695167 + 188 NA promoter-TSS (FBgn0014028) protein_coding-promoter-TSS (FBgn0014028) -7 FBgn0014028 FBgn0014028 FBtr0086156 SdhB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6906 chrUextra 5224049 5224435 + 188 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1438 chr2L 19361916 19362097 + 188 NA intron (FBgn0024245, intron 1 of 3) protein_coding-intron (FBgn0024245, intron 1 of 3) 1218 FBgn0024245 FBgn0024245 FBtr0081224 dnt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7218 chrX 16316734 16316839 + 188 NA promoter-TSS (FBgn0026575) protein_coding-promoter-TSS (FBgn0026575) -91 FBgn0026575 FBgn0026575 FBtr0290069 hang protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4595 chr3R 255035 255121 + 188 NA promoter-TSS (FBgn0037248) protein_coding-promoter-TSS (FBgn0037248) -27 FBgn0037248 FBgn0037248 FBtr0301244 Spargel protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3928 chr3L 11701657 11701772 + 186 NA promoter-TSS (FBgn0036196) protein_coding-promoter-TSS (FBgn0036196) -61 FBgn0036196 FBgn0036196 FBtr0076125 CG11658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3878 chr3L 10657730 10657912 + 184 NA promoter-TSS (FBgn0010762) protein_coding-promoter-TSS (FBgn0010762) -18 FBgn0010762 FBgn0010762 FBtr0331573 simj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2233 chr2R 5846324 5846424 + 183 NA promoter-TSS (FBgn0033466) protein_coding-promoter-TSS (FBgn0033466) -24 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_499 chr2L 8082948 8083057 + 182 NA promoter-TSS (FBgn0020240) protein_coding-promoter-TSS (FBgn0020240) -20 FBgn0020240 FBgn0020240 FBtr0079543 Mcr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6914 chrUextra 8455542 8455616 + 181 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_443 chr2L 6817528 6817720 + 181 NA Intergenic Intergenic -4693 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6932 chrUextra 15572792 15572858 + 181 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2517 chr2R 10345482 10345893 + 181 NA promoter-TSS (FBgn0261613) protein_coding-promoter-TSS (FBgn0261613) 22283 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7179 chrX 13190679 13190752 + 181 NA promoter-TSS (FBgn0030468) protein_coding-promoter-TSS (FBgn0030468) -31 FBgn0030467 FBgn0030467 FBtr0073796 CG1764 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6378 chr3R 25687162 25687264 + 180 NA promoter-TSS (FBgn0039713) protein_coding-promoter-TSS (FBgn0039713) -16 FBgn0039712 FBgn0039712 FBtr0085523 CG15514 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2426 chr2R 8927064 8927194 + 179 NA Intergenic Intergenic 7664 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6896 chrUextra 2678529 2678654 + 179 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_213 chr2L 3172991 3173121 + 178 NA promoter-TSS (FBgn0031512) protein_coding-promoter-TSS (FBgn0031512) 28 FBgn0011984 FBgn0011984 FBtr0077613 tRNA:S7:23Ea tRNA Nup98-S2-pascual-garcia2017_R1_peak_3435 chr3L 640500 640664 + 178 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) -1677 FBgn0262451 FBgn0262451 FBtr0304469 ban pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3782 chr3L 8500267 8500420 + 178 NA promoter-TSS (FBgn0262719) protein_coding-promoter-TSS (FBgn0262719) -97 FBgn0262719 FBgn0262719 FBtr0308608 CG43163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3032 chr2R 19244874 19244975 + 177 NA promoter-TSS (FBgn0034850) protein_coding-promoter-TSS (FBgn0034850) -22 FBgn0034849 FBgn0034849 FBtr0329860 CG3500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6370 chr3R 25642158 25642236 + 176 NA promoter-TSS (FBgn0039702) protein_coding-promoter-TSS (FBgn0039702) -25 FBgn0039702 FBgn0039702 FBtr0085533 Vps16B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1406 chr2L 19054055 19054140 + 174 NA promoter-TSS (FBgn0032748) protein_coding-promoter-TSS (FBgn0032748) 16 FBgn0032748 FBgn0032748 FBtr0113043 CG10492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7006 chrX 1816929 1817039 + 173 NA promoter-TSS (FBgn0023508) protein_coding-promoter-TSS (FBgn0023508) -30 FBgn0023508 FBgn0023508 FBtr0332586 Ocrl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7203 chrX 15217482 15217582 + 172 NA intron (FBgn0004924, intron 4 of 7) protein_coding-intron (FBgn0004924, intron 4 of 7) 3130 FBgn0004924 FBgn0004924 FBtr0074006 Top1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_900 chr2L 14024181 14024266 + 171 NA Intergenic Intergenic -2787 FBgn0028519 FBgn0028519 FBtr0080591 CG4500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6889 chrUextra 599603 599983 + 171 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1420 chr2L 19185997 19186076 + 170 NA promoter-TSS (FBgn0010309) protein_coding-promoter-TSS (FBgn0010309) -7 FBgn0010309 FBgn0010309 FBtr0302561 pigeon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2185 chr2R 5019906 5019990 + 170 NA promoter-TSS (FBgn0033382) protein_coding-promoter-TSS (FBgn0033382) -44 FBgn0033382 FBgn0033382 FBtr0302496 Hydr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4906 chr3R 5063402 5063488 + 170 NA promoter-TSS (FBgn0003165) protein_coding-promoter-TSS (FBgn0003165) 2544 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1042 chr2L 15060681 15060891 + 169 NA promoter-TSS (FBgn0010422) protein_coding-promoter-TSS (FBgn0010422) -29 FBgn0010422 FBgn0010422 FBtr0080722 TfIIS protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2240 chr2R 6047482 6047730 + 168 NA intron (FBgn0033494, intron 1 of 16) protein_coding-intron (FBgn0033494, intron 1 of 16) -1517 FBgn0033495 FBgn0033495 FBtr0088370 CG12214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7142 chrX 11249876 11249943 + 168 NA promoter-TSS (FBgn0000499) protein_coding-promoter-TSS (FBgn0000499) -5 FBgn0000499 FBgn0000499 FBtr0073454 dsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5470 chr3R 13443472 13443559 + 167 NA promoter-TSS (FBgn0012002) tRNA-promoter-TSS (FBgn0012002) 32 FBgn0012002 FBgn0012002 FBtr0083466 tRNA:V3b:90BC tRNA Nup98-S2-pascual-garcia2017_R1_peak_5220 chr3R 9924416 9924564 + 167 NA promoter-TSS (FBgn0038200) protein_coding-promoter-TSS (FBgn0038200) -688 FBgn0038200 FBgn0038200 FBtr0082917 CG9920 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4843 chr3R 4007559 4007723 + 167 NA promoter-TSS (FBgn0001138) protein_coding-promoter-TSS (FBgn0001138) -477 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7217 chrX 16172290 16172401 + 167 NA promoter-TSS (FBgn0000536) protein_coding-promoter-TSS (FBgn0000536) -65 FBgn0000536 FBgn0000536 FBtr0074214 eas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4113 chr3L 14667423 14667553 + 167 NA promoter-TSS (FBgn0011928) tRNA-promoter-TSS (FBgn0011928) 44 FBgn0011928 FBgn0011928 FBtr0075681 tRNA:M3:70Fb tRNA Nup98-S2-pascual-garcia2017_R1_peak_7149 chrX 12097690 12097872 + 167 NA promoter-TSS (FBgn0259240) protein_coding-promoter-TSS (FBgn0259240) -84 FBgn0259240 FBgn0259240 FBtr0299858 Ten-a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2414 chr2R 8791894 8791988 + 167 NA Intergenic Intergenic -11561 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2551 chr2R 10868708 10868797 + 167 NA promoter-TSS (FBgn0033988) protein_coding-promoter-TSS (FBgn0033988) -30 FBgn0033988 FBgn0033988 FBtr0301507 pcs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4762 chr3R 2826662 2826870 + 167 NA Intergenic Intergenic -51291 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4090 chr3L 14265919 14266041 + 167 NA Intergenic Intergenic -1463 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4427 chr3L 21027572 21027672 + 166 NA promoter-TSS (FBgn0026179) protein_coding-promoter-TSS (FBgn0026179) -319 FBgn0037046 FBgn0037046 FBtr0078326 CG10581 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4393 chr3L 19626229 19626356 + 165 NA promoter-TSS (FBgn0036896) protein_coding-promoter-TSS (FBgn0036896) -96 FBgn0036896 FBgn0036896 FBtr0302513 wnd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7158 chrX 12633238 12633320 + 165 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 3198 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1041 chr2L 15057837 15057999 + 165 NA promoter-TSS (FBgn0000317) protein_coding-promoter-TSS (FBgn0000317) -70 FBgn0000317 FBgn0000317 FBtr0080724 ck protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6144 chr3R 23779784 23779872 + 165 NA promoter-TSS (FBgn0039564) protein_coding-promoter-TSS (FBgn0039564) 6 FBgn0039563 FBgn0039563 FBtr0085265 CG4951 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_518 chr2L 8535166 8535273 + 164 NA promoter-TSS (FBgn0028394) protein_coding-promoter-TSS (FBgn0028394) 6078 FBgn0028394 FBgn0028394 FBtr0079689 CG17834 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7160 chrX 12647754 12647861 + 164 NA Intergenic Intergenic 6843 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6366 chr3R 25598795 25598898 + 163 NA exon (FBgn0001297, exon 1 of 3) protein_coding-exon (FBgn0001297, exon 1 of 3) 7607 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_143 chr2L 1649922 1650079 + 161 NA Intergenic Intergenic -1258 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3961 chr3L 12270675 12270771 + 161 NA promoter-TSS (FBgn0036273) protein_coding-promoter-TSS (FBgn0036273) -372 FBgn0036272 FBgn0036272 FBtr0076010 CG4300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6899 chrUextra 3094535 3094693 + 160 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_168 chr2L 2203303 2203552 + 160 NA TTS (FBgn0051668) protein_coding-TTS (FBgn0051668) 2739 FBgn0051668 FBgn0051668 FBtr0307523 CG31668 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5600 chr3R 14973250 14973333 + 160 NA exon (FBgn0261285, exon 1 of 5) protein_coding-exon (FBgn0261285, exon 1 of 5) 338 FBgn0261285 FBgn0261285 FBtr0330044 Ppcs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_795 chr2L 12543328 12543470 + 160 NA exon (FBgn0261709, exon 1 of 2) ncRNA-exon (FBgn0261709, exon 1 of 2) 223 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_137 chr2L 1614233 1614309 + 160 NA promoter-TSS (FBgn0021906) protein_coding-promoter-TSS (FBgn0021906) -89 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4933 chr3R 5580383 5580464 + 160 NA promoter-TSS (FBgn0037741) protein_coding-promoter-TSS (FBgn0037741) -15 FBgn0037741 FBgn0037741 FBtr0082166 CG16908 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2538 chr2R 10645321 10645395 + 159 NA promoter-TSS (FBgn0033962) protein_coding-promoter-TSS (FBgn0033962) 0 FBgn0033962 FBgn0033962 FBtr0087470 CG10153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4195 chr3L 16080592 16080685 + 159 NA promoter-TSS (FBgn0263602) protein_coding-promoter-TSS (FBgn0263602) -13 FBgn0263602 FBgn0263602 FBtr0075498 Taspase1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4381 chr3L 19085702 19085790 + 159 NA promoter-TSS (FBgn0036846) protein_coding-promoter-TSS (FBgn0036846) -24 FBgn0036846 FBgn0036846 FBtr0330090 MESR6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6503 chr3R 27406389 27406476 + 159 NA promoter-TSS (FBgn0003268) protein_coding-promoter-TSS (FBgn0003268) -20 FBgn0043900 FBgn0043900 FBtr0085806 pygo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2901 chr2R 16864472 16864596 + 158 NA promoter-TSS (FBgn0034564) protein_coding-promoter-TSS (FBgn0034564) -27 FBgn0034564 FBgn0034564 FBtr0071520 CG9344 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2234 chr2R 5911472 5911548 + 158 NA intron (FBgn0022382, intron 2 of 9) protein_coding-intron (FBgn0022382, intron 2 of 9) 2037 FBgn0022382 FBgn0022382 FBtr0112902 Pka-R2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4949 chr3R 5868594 5868696 + 158 NA promoter-TSS (FBgn0027524) protein_coding-promoter-TSS (FBgn0027524) -28 FBgn0053208 FBgn0053208 FBtr0273185 Mical protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6959 chrUextra 26582303 26582375 + 158 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5638 chr3R 15466959 15467045 + 157 NA promoter-TSS (FBgn0038721) protein_coding-promoter-TSS (FBgn0038721) 1458 FBgn0038721 FBgn0038721 FBtr0083806 CG16718 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5926 chr3R 21486996 21487086 + 157 NA promoter-TSS (FBgn0027508) protein_coding-promoter-TSS (FBgn0027508) -38 FBgn0027508 FBgn0027508 FBtr0330383 tankyrase protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6670 chrM 1763 1951 + 157 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2273 chr2R 6451885 6452056 + 156 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 6577 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2333 chr2R 7492543 7492745 + 156 NA promoter-TSS (FBgn0033636) protein_coding-promoter-TSS (FBgn0033636) -203 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7246 chrX 18279236 18279359 + 156 NA promoter-TSS (FBgn0008635) protein_coding-promoter-TSS (FBgn0008635) -69 FBgn0008635 FBgn0008635 FBtr0074576 betaCop protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7180 chrX 13196763 13196906 + 156 NA Intergenic Intergenic -2718 FBgn0030469 FBgn0030469 FBtr0073759 CG15745 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7233 chrX 17715711 17715808 + 155 NA exon (FBgn0030869, exon 9 of 9) protein_coding-exon (FBgn0030869, exon 9 of 9) -2041 FBgn0030868 FBgn0030868 FBtr0074474 CG12986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1257 chr2L 17243245 17243404 + 155 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 3965 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7183 chrX 13232284 13232381 + 155 NA promoter-TSS (FBgn0030474) protein_coding-promoter-TSS (FBgn0030474) -55 FBgn0030474 FBgn0030474 FBtr0073766 CG15747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2893 chr2R 16758202 16758299 + 155 NA promoter-TSS (FBgn0050295) protein_coding-promoter-TSS (FBgn0050295) -46 FBgn0050295 FBgn0050295 FBtr0071515 Ipk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5413 chr3R 12695095 12695324 + 155 NA intron (FBgn0263610, intron 4 of 7) ncRNA-intron (FBgn0263610, intron 3 of 6) 13172 FBgn0262462 FBgn0262462 FBtr0304522 mir-iab-4 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3513 chr3L 2244182 2244341 + 154 NA promoter-TSS (FBgn0052301) protein_coding-promoter-TSS (FBgn0052301) -217 FBgn0052301 FBgn0052301 FBtr0332663 CG32301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6315 chr3R 25381896 25382051 + 154 NA promoter-TSS (FBgn0000492) protein_coding-promoter-TSS (FBgn0000492) -136 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2421 chr2R 8879213 8879413 + 154 NA Intergenic Intergenic -2089 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7211 chrX 16041823 16042021 + 154 NA exon (FBgn0042650, exon 1 of 4) protein_coding-exon (FBgn0042650, exon 1 of 4) -23557 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3872 chr3L 10607641 10607719 + 154 NA Intergenic Intergenic 8996 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5770 chr3R 16981674 16981778 + 154 NA promoter-TSS (FBgn0264357) protein_coding-promoter-TSS (FBgn0264357) -358 FBgn0264357 FBgn0264357 FBtr0110937 SNF4Agamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3043 chr2R 19519852 19520013 + 154 NA promoter-TSS (FBgn0004795) protein_coding-promoter-TSS (FBgn0004795) -203 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3733 chr3L 7426654 7426738 + 153 NA TTS (FBgn0014011) protein_coding-TTS (FBgn0014011) 1594 FBgn0014011 FBgn0014011 FBtr0076867 Rac2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4397 chr3L 19680452 19680591 + 153 NA promoter-TSS (FBgn0004623) protein_coding-promoter-TSS (FBgn0004623) -68 FBgn0036900 FBgn0036900 FBtr0331859 CG8765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2338 chr2R 7528425 7528506 + 152 NA promoter-TSS (FBgn0033638) protein_coding-promoter-TSS (FBgn0033638) -47 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3914 chr3L 11358606 11358878 + 152 NA promoter-TSS (FBgn0036155) protein_coding-promoter-TSS (FBgn0036155) -757 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4848 chr3R 4095586 4095685 + 152 NA promoter-TSS (FBgn0037561) protein_coding-promoter-TSS (FBgn0037561) -31 FBgn0037561 FBgn0037561 FBtr0081866 CG9630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3770 chr3L 8339862 8339959 + 152 NA promoter-TSS (FBgn0035879) protein_coding-promoter-TSS (FBgn0035879) 249 FBgn0035879 FBgn0035879 FBtr0076605 CG7112 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3064 chr2R 19752873 19752953 + 152 NA promoter-TSS (FBgn0034919) protein_coding-promoter-TSS (FBgn0034919) 4 FBgn0025335 FBgn0025335 FBtr0072227 CG4585 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4212 chr3L 16371620 16371733 + 152 NA promoter-TSS (FBgn0036621) protein_coding-promoter-TSS (FBgn0036621) 74 FBgn0036621 FBgn0036621 FBtr0331173 roq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_477 chr2L 7412360 7412435 + 152 NA promoter-TSS (FBgn0028387) protein_coding-promoter-TSS (FBgn0028387) -20 FBgn0028387 FBgn0028387 FBtr0308610 chm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4892 chr3R 4637557 4637638 + 152 NA intron (FBgn0037635, intron 1 of 1) protein_coding-intron (FBgn0037635, intron 1 of 1) -2064 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4224 chr3L 16577323 16577418 + 151 NA promoter-TSS (FBgn0250814) protein_coding-promoter-TSS (FBgn0250814) -3 FBgn0250814 FBgn0250814 FBtr0331557 CG4169 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6069 chr3R 23079123 23079221 + 151 NA promoter-TSS (FBgn0011289) protein_coding-promoter-TSS (FBgn0011289) 20 FBgn0011289 FBgn0011289 FBtr0085156 TfIIA-L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5729 chr3R 16447584 16447695 + 151 NA promoter-TSS (FBgn0001169) protein_coding-promoter-TSS (FBgn0001169) -26 FBgn0001169 FBgn0001169 FBtr0083916 H protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4001 chr3L 12798163 12798249 + 150 NA promoter-TSS (FBgn0262714) protein_coding-promoter-TSS (FBgn0262714) 10 FBgn0260945 FBgn0260945 FBtr0300561 Atg1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4850 chr3R 4134360 4134448 + 150 NA promoter-TSS (FBgn0037569) protein_coding-promoter-TSS (FBgn0037569) -60 FBgn0037569 FBgn0037569 FBtr0081861 tex protein_coding Nup98-S2-pascual-garcia2017_R1_peak_936 chr2L 14355080 14355187 + 149 NA promoter-TSS (FBgn0015791) protein_coding-promoter-TSS (FBgn0015791) -53 FBgn0261535 FBgn0261535 FBtr0080639 l(2)34Fd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7104 chrX 8468219 8468309 + 148 NA promoter-TSS (FBgn0030052) protein_coding-promoter-TSS (FBgn0030052) -73 FBgn0030052 FBgn0030052 FBtr0300751 CG12065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7062 chrX 5641300 5641384 + 148 NA promoter-TSS (FBgn0029798) protein_coding-promoter-TSS (FBgn0029798) -55 FBgn0261383 FBgn0261383 FBtr0070842 IntS6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5151 chr3R 8836997 8837085 + 148 NA promoter-TSS (FBgn0020496) protein_coding-promoter-TSS (FBgn0020496) -31 FBgn0038110 FBgn0038110 FBtr0082719 CG8031 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5744 chr3R 16641891 16641981 + 148 NA promoter-TSS (FBgn0038827) protein_coding-promoter-TSS (FBgn0038827) -13 FBgn0038827 FBgn0038827 FBtr0083995 Fancd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3751 chr3L 7860619 7860709 + 148 NA promoter-TSS (FBgn0016694) protein_coding-promoter-TSS (FBgn0016694) -195 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4288 chr3L 17458972 17459094 + 148 NA promoter-TSS (FBgn0036726) protein_coding-promoter-TSS (FBgn0036726) -12 FBgn0036726 FBgn0036726 FBtr0075220 CG7603 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7146 chrX 11473051 11473126 + 147 NA promoter-TSS (FBgn0019660) ncRNA-promoter-TSS (FBgn0019660) -33 FBgn0019660 FBgn0019660 FBtr0308845 roX2 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_876 chr2L 13514348 13514443 + 147 NA intron (FBgn0023407, intron 3 of 6) protein_coding-intron (FBgn0023407, intron 3 of 6) -13446 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7019 chrX 2540134 2540248 + 147 NA promoter-TSS (FBgn0003371) protein_coding-promoter-TSS (FBgn0003371) 3141 FBgn0003371 FBgn0003371 FBtr0112828 sgg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2329 chr2R 7469617 7469813 + 147 NA intron (FBgn0033636, intron 11 of 15) protein_coding-intron (FBgn0033636, intron 12 of 16) 6121 FBgn0082993 FBgn0082993 FBtr0113499 snoRNA:Psi28S-1936 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7264 chrX 20264755 20264859 + 147 NA promoter-TSS (FBgn0031106) protein_coding-promoter-TSS (FBgn0031106) 0 FBgn0031106 FBgn0031106 FBtr0077330 Syx16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5175 chr3R 9260676 9260835 + 146 NA promoter-TSS (FBgn0004049) protein_coding-promoter-TSS (FBgn0004049) -51 FBgn0004049 FBgn0004049 FBtr0114376 yrt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5875 chr3R 19604021 19604693 + 146 NA exon (FBgn0039120, exon 2 of 9) protein_coding-exon (FBgn0039120, exon 2 of 9) 2774 FBgn0039120 FBgn0039120 FBtr0304567 Nup98-96 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_158 chr2L 1972742 1972960 + 145 NA Intergenic Intergenic -1275 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6272 chr3R 24948987 24949154 + 145 NA promoter-TSS (FBgn0039637) protein_coding-promoter-TSS (FBgn0039637) -68 FBgn0039637 FBgn0039637 FBtr0085373 CG11880 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2499 chr2R 10061101 10061194 + 144 NA promoter-TSS (FBgn0000289) protein_coding-promoter-TSS (FBgn0000289) -14 FBgn0033907 FBgn0033907 FBtr0087578 mRpS16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1505 chr2L 20104582 20104735 + 143 NA promoter-TSS (FBgn0032851) protein_coding-promoter-TSS (FBgn0032851) -568 FBgn0032851 FBgn0032851 FBtr0089388 CG13970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2600 chr2R 11736034 11736129 + 143 NA promoter-TSS (FBgn0034046) protein_coding-promoter-TSS (FBgn0034046) -30 FBgn0034046 FBgn0034046 FBtr0087287 tun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5034 chr3R 7045767 7045849 + 142 NA promoter-TSS (FBgn0037877) protein_coding-promoter-TSS (FBgn0037877) -42 FBgn0037877 FBgn0037877 FBtr0082368 CG6689 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4311 chr3L 17662351 17662477 + 142 NA promoter-TSS (FBgn0036746) protein_coding-promoter-TSS (FBgn0036746) -80 FBgn0036746 FBgn0036746 FBtr0075196 TORC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5489 chr3R 13637173 13637309 + 142 NA promoter-TSS (FBgn0038552) protein_coding-promoter-TSS (FBgn0038552) -25 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5415 chr3R 12708200 12708466 + 141 NA intron (FBgn0263610, intron 3 of 7) ncRNA-intron (FBgn0263610, intron 2 of 6) -9799 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2013 chr2R 2077853 2077960 + 141 NA promoter-TSS (FBgn0011934) tRNA-promoter-TSS (FBgn0011934) 29 FBgn0011934 FBgn0011934 FBtr0085989 tRNA:N5:42Ad tRNA Nup98-S2-pascual-garcia2017_R1_peak_6944 chrUextra 20462989 20463054 + 141 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5830 chr3R 18222896 18222995 + 141 NA promoter-TSS (FBgn0051166) tRNA-promoter-TSS (FBgn0051166) 38 FBgn0051167 FBgn0051167 FBtr0084232 tRNA:CR31167 tRNA Nup98-S2-pascual-garcia2017_R1_peak_368 chr2L 5461285 5461420 + 141 NA promoter-TSS (FBgn0261963) protein_coding-promoter-TSS (FBgn0261963) -289 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1531 chr2L 20399474 20399545 + 141 NA promoter-TSS (FBgn0032857) protein_coding-promoter-TSS (FBgn0032857) -115 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3804 chr3L 8979746 8979842 + 141 NA promoter-TSS (FBgn0035951) protein_coding-promoter-TSS (FBgn0035951) -16 FBgn0035951 FBgn0035951 FBtr0076519 CG5068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_164 chr2L 2031673 2031788 + 141 NA promoter-TSS (FBgn0011860) tRNA-promoter-TSS (FBgn0011860) 38 FBgn0011860 FBgn0011860 FBtr0077821 tRNA:G3:22BCb tRNA Nup98-S2-pascual-garcia2017_R1_peak_1573 chr2L 20714615 20714788 + 141 NA promoter-TSS (FBgn0014859) protein_coding-promoter-TSS (FBgn0014859) -285 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6271 chr3R 24948565 24948660 + 141 NA promoter-TSS (FBgn0039637) protein_coding-promoter-TSS (FBgn0039637) -11 FBgn0005596 FBgn0005596 FBtr0330292 yemalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2050 chr2R 3188305 3188444 + 141 NA TTS (FBgn0003174) protein_coding-TTS (FBgn0003174) -10539 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6931 chrUextra 14491626 14491691 + 141 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2141 chr2R 4620930 4621057 + 140 NA promoter-TSS (FBgn0086784) protein_coding-promoter-TSS (FBgn0086784) 816 FBgn0086784 FBgn0086784 FBtr0088716 stmA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3879 chr3L 10674149 10674258 + 139 NA intron (FBgn0010762, intron 1 of 8) protein_coding-intron (FBgn0010762, intron 2 of 9) -9921 FBgn0036099 FBgn0036099 FBtr0076265 CG11811 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7078 chrX 6266916 6266979 + 139 NA promoter-TSS (FBgn0003139) protein_coding-promoter-TSS (FBgn0003139) 1 FBgn0003139 FBgn0003139 FBtr0331432 PpV protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3893 chr3L 10732734 10732859 + 139 NA Intergenic Intergenic -32296 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7024 chrX 3028771 3028913 + 138 NA promoter-TSS (FBgn0004647) protein_coding-promoter-TSS (FBgn0004647) -63 FBgn0004647 FBgn0004647 FBtr0304659 N protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2904 chr2R 16887628 16887754 + 138 NA promoter-TSS (FBgn0034570) protein_coding-promoter-TSS (FBgn0034570) 3966 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2224 chr2R 5730008 5730102 + 138 NA promoter-TSS (FBgn0033453) protein_coding-promoter-TSS (FBgn0033453) -41 FBgn0033452 FBgn0033452 FBtr0089394 CG1599 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3615 chr3L 5746005 5746100 + 138 NA promoter-TSS (FBgn0016756) protein_coding-promoter-TSS (FBgn0016756) -21 FBgn0016756 FBgn0016756 FBtr0077096 Ubp64E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4719 chr3R 2472520 2472639 + 138 NA promoter-TSS (FBgn0010355) protein_coding-promoter-TSS (FBgn0010355) -32 FBgn0010355 FBgn0010355 FBtr0304903 Taf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2503 chr2R 10143913 10144008 + 138 NA promoter-TSS (FBgn0033918) protein_coding-promoter-TSS (FBgn0033918) -6 FBgn0033918 FBgn0033918 FBtr0087538 CG8531 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6930 chrUextra 14302000 14302065 + 137 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7029 chrX 3347235 3347308 + 137 NA Intergenic Intergenic 7002 FBgn0029659 FBgn0029659 FBtr0331608 CG16782 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2614 chr2R 12037568 12037666 + 137 NA promoter-TSS (FBgn0034081) protein_coding-promoter-TSS (FBgn0034081) -11 FBgn0034083 FBgn0034083 FBtr0302084 lbk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6560 chr3RHet 791122 791186 + 137 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5062 chr3R 7505364 7505442 + 136 NA promoter-TSS (FBgn0037933) protein_coding-promoter-TSS (FBgn0037933) 5 FBgn0011290 FBgn0011290 FBtr0082442 Taf12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1195 chr2L 16637511 16637606 + 136 NA intron (FBgn0259735, intron 3 of 5) protein_coding-intron (FBgn0259735, intron 2 of 4) -19557 FBgn0259735 FBgn0259735 FBtr0300005 CG42389 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4237 chr3L 16776049 16776119 + 136 NA promoter-TSS (FBgn0036662) protein_coding-promoter-TSS (FBgn0036662) -272 FBgn0036662 FBgn0036662 FBtr0075327 CG9706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5011 chr3R 6719226 6719365 + 136 NA promoter-TSS (FBgn0037855) protein_coding-promoter-TSS (FBgn0037855) -43 FBgn0037855 FBgn0037855 FBtr0302935 CG6621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5121 chr3R 8538063 8538134 + 136 NA promoter-TSS (FBgn0002905) protein_coding-promoter-TSS (FBgn0002905) -77 FBgn0002905 FBgn0002905 FBtr0082662 mus308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5465 chr3R 13372214 13372294 + 136 NA promoter-TSS (FBgn0038519) protein_coding-promoter-TSS (FBgn0038519) -23 FBgn0038519 FBgn0038519 FBtr0083503 Prx3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5899 chr3R 20353717 20353802 + 135 NA promoter-TSS (FBgn0039204) protein_coding-promoter-TSS (FBgn0039204) -39 FBgn0039204 FBgn0039204 FBtr0084644 CG6607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2395 chr2R 8523627 8523726 + 135 NA promoter-TSS (FBgn0011604) protein_coding-promoter-TSS (FBgn0011604) -30 FBgn0061360 FBgn0061360 FBtr0091651 CG33672 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1596 chr2L 21052112 21052236 + 135 NA promoter-TSS (FBgn0010395) protein_coding-promoter-TSS (FBgn0010395) -859 FBgn0010395 FBgn0010395 FBtr0081461 betaInt-nu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5879 chr3R 19644928 19645109 + 134 NA promoter-TSS (FBgn0053111) protein_coding-promoter-TSS (FBgn0053111) -64 FBgn0053111 FBgn0053111 FBtr0084530 CG33111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6924 chrUextra 12698927 12698994 + 134 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_727 chr2L 11358627 11358829 + 133 NA promoter-TSS (FBgn0000287) protein_coding-promoter-TSS (FBgn0000287) -145 FBgn0000287 FBgn0000287 FBtr0080236 salr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3617 chr3L 5763949 5764084 + 133 NA promoter-TSS (FBgn0260936) protein_coding-promoter-TSS (FBgn0260936) -249 FBgn0260936 FBgn0260936 FBtr0330127 scny protein_coding Nup98-S2-pascual-garcia2017_R1_peak_17 chr2L 414733 414826 + 132 NA promoter-TSS (FBgn0263933) protein_coding-promoter-TSS (FBgn0263933) -288 FBgn0263933 FBgn0263933 FBtr0078055 ebi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2294 chr2R 7089938 7090046 + 132 NA intron (FBgn0003396, intron 1 of 6) protein_coding-intron (FBgn0003396, intron 2 of 7) 16777 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2285 chr2R 6726210 6726285 + 132 NA promoter-TSS (FBgn0027525) protein_coding-promoter-TSS (FBgn0027525) -16 FBgn0027525 FBgn0027525 FBtr0088245 CG7686 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7065 chrX 5793308 5793561 + 132 NA Intergenic Intergenic -1460 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5767 chr3R 16941915 16941996 + 131 NA promoter-TSS (FBgn0010770) protein_coding-promoter-TSS (FBgn0010770) -21 FBgn0010770 FBgn0010770 FBtr0084012 ppan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7094 chrX 7521169 7521336 + 131 NA intron (FBgn0004198, intron 1 of 6) protein_coding-intron (FBgn0004198, intron 1 of 6) 18071 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6870 chrUextra 206080 206203 + 131 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7037 chrX 3755329 3755465 + 131 NA exon (FBgn0019661, exon 1 of 1) ncRNA-exon (FBgn0019661, exon 1 of 1) 1061 FBgn0019661 FBgn0019661 FBtr0070634 roX1 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7182 chrX 13231697 13231788 + 131 NA promoter-TSS (FBgn0030474) protein_coding-promoter-TSS (FBgn0030474) -67 FBgn0010198 FBgn0010198 FBtr0073795 RpS15Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4003 chr3L 12808941 12809045 + 131 NA intron (FBgn0260965, intron 1 of 10) protein_coding-intron (FBgn0260965, intron 1 of 9) 1639 FBgn0260965 FBgn0260965 FBtr0304053 CG42588 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3526 chr3L 2774273 2774381 + 131 NA promoter-TSS (FBgn0044452) protein_coding-promoter-TSS (FBgn0044452) -11 FBgn0044452 FBgn0044452 FBtr0333441 Atg2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4376 chr3L 18993695 18993768 + 130 NA promoter-TSS (FBgn0036838) protein_coding-promoter-TSS (FBgn0036838) -23 FBgn0036838 FBgn0036838 FBtr0075041 CG3808 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2496 chr2R 9851164 9851244 + 130 NA promoter-TSS (FBgn0261975) protein_coding-promoter-TSS (FBgn0261975) -969 FBgn0261975 FBgn0261975 FBtr0304022 CG42806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2041 chr2R 2859119 2859226 + 129 NA promoter-TSS (FBgn0053558) protein_coding-promoter-TSS (FBgn0053558) -30 FBgn0066292 FBgn0066292 FBtr0332945 CheB42c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2952 chr2R 17772061 17772149 + 129 NA intron (FBgn0085397, intron 1 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 1288 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding Nup98-S2-pascual-garcia2017_R1_peak_202 chr2L 2987692 2987776 + 129 NA promoter-TSS (FBgn0025109) protein_coding-promoter-TSS (FBgn0025109) -11 FBgn0250786 FBgn0250786 FBtr0305980 Chd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4087 chr3L 14183837 14184024 + 128 NA promoter-TSS (FBgn0013718) protein_coding-promoter-TSS (FBgn0013718) -1182 FBgn0036414 FBgn0036414 FBtr0321258 nan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6933 chrUextra 15996497 15996556 + 128 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2457 chr2R 9318204 9318372 + 128 NA promoter-TSS (FBgn0011882) tRNA-promoter-TSS (FBgn0011882) 32 FBgn0011909 FBgn0011909 FBtr0089303 tRNA:L3:49Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_3990 chr3L 12646395 12646502 + 128 NA promoter-TSS (FBgn0263379) ncRNA-promoter-TSS (FBgn0263379) -258 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_635 chr2L 9540121 9540215 + 128 NA promoter-TSS (FBgn0032124) protein_coding-promoter-TSS (FBgn0032124) -463 FBgn0032124 FBgn0032124 FBtr0079830 CG17855 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5206 chr3R 9727321 9727491 + 128 NA promoter-TSS (FBgn0000576) protein_coding-promoter-TSS (FBgn0000576) -175 FBgn0000576 FBgn0000576 FBtr0082863 ems protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3475 chr3L 1488734 1488822 + 128 NA promoter-TSS (FBgn0086670) snoRNA-promoter-TSS (FBgn0086670) 39 FBgn0263839 FBgn0263839 FBtr0321280 CR43701 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6589 chr3RHet 2136624 2136689 + 128 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3688 chr3L 6897201 6897460 + 128 NA Intergenic Intergenic 9734 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_350 chr2L 5240751 5240843 + 128 NA promoter-TSS (FBgn0051971) tRNA-promoter-TSS (FBgn0051971) 31 FBgn0051971 FBgn0051971 FBtr0079064 tRNA:CR31971 tRNA Nup98-S2-pascual-garcia2017_R1_peak_424 chr2L 6467675 6467802 + 128 NA promoter-TSS (FBgn0031817) protein_coding-promoter-TSS (FBgn0031817) -38 FBgn0031817 FBgn0031817 FBtr0331185 CG9531 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5939 chr3R 21707658 21707740 + 127 NA promoter-TSS (FBgn0039381) protein_coding-promoter-TSS (FBgn0039381) -8 FBgn0039381 FBgn0039381 FBtr0084911 Sppl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_674 chr2L 10200978 10201057 + 127 NA promoter-TSS (FBgn0005593) protein_coding-promoter-TSS (FBgn0005593) -45 FBgn0032189 FBgn0032189 FBtr0079962 Ripalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5901 chr3R 20410869 20410962 + 127 NA promoter-TSS (FBgn0039210) protein_coding-promoter-TSS (FBgn0039210) -33 FBgn0039210 FBgn0039210 FBtr0084671 CG13625 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3935 chr3L 11788650 11788729 + 126 NA promoter-TSS (FBgn0004381) protein_coding-promoter-TSS (FBgn0004381) -25 FBgn0004381 FBgn0004381 FBtr0332129 Klp68D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7195 chrX 13783032 13783123 + 126 NA intron (FBgn0263115, intron 3 of 7) protein_coding-intron (FBgn0263115, intron 2 of 4) -31920 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3574 chr3L 4170310 4170383 + 125 NA promoter-TSS (FBgn0261274) protein_coding-promoter-TSS (FBgn0261274) -58 FBgn0261274 FBgn0261274 FBtr0073217 Ero1L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1395 chr2L 18796080 18796179 + 125 NA Intergenic Intergenic 9218 FBgn0264362 FBgn0264362 FBtr0332209 CG43814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_423 chr2L 6412073 6412192 + 125 NA promoter-TSS (FBgn0031811) protein_coding-promoter-TSS (FBgn0031811) -183 FBgn0031811 FBgn0031811 FBtr0079256 CG13982 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1116 chr2L 15747586 15747674 + 125 NA intron (FBgn0010382, intron 1 of 5) protein_coding-intron (FBgn0010382, intron 1 of 5) -1021 FBgn0010382 FBgn0010382 FBtr0080777 CycE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4846 chr3R 4016632 4016831 + 124 NA Intergenic Intergenic 6702 FBgn0262994 FBgn0262994 FBtr0306837 CR43302 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6849 chrU 6445290 6445350 + 124 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2710 chr2R 13585820 13585968 + 123 NA promoter-TSS (FBgn0045800) ncRNA-promoter-TSS (FBgn0045800) -28 FBgn0027872 FBgn0027872 FBtr0086888 rdgBbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_198 chr2L 2855734 2855809 + 123 NA promoter-TSS (FBgn0015521) protein_coding-promoter-TSS (FBgn0015521) -299 FBgn0015521 FBgn0015521 FBtr0273293 RpS21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4188 chr3L 16019238 16019588 + 123 NA intron (FBgn0044028, intron 1 of 3) protein_coding-intron (FBgn0044028, intron 1 of 3) 2833 FBgn0044028 FBgn0044028 FBtr0075435 Notum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2502 chr2R 10104111 10104179 + 123 NA promoter-TSS (FBgn0033912) protein_coding-promoter-TSS (FBgn0033912) -13 FBgn0033912 FBgn0033912 FBtr0087575 RpS23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3608 chr3L 5359265 5359352 + 122 NA promoter-TSS (FBgn0260856) protein_coding-promoter-TSS (FBgn0260856) -247 FBgn0260856 FBgn0260856 FBtr0077145 membrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2523 chr2R 10505581 10505706 + 122 NA promoter-TSS (FBgn0010638) protein_coding-promoter-TSS (FBgn0010638) -93 FBgn0026427 FBgn0026427 FBtr0087502 Su(var)2-HP2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3749 chr3L 7803107 7803203 + 122 NA promoter-TSS (FBgn0052369) protein_coding-promoter-TSS (FBgn0052369) -230 FBgn0052369 FBgn0052369 FBtr0076783 CG32369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_508 chr2L 8403506 8403599 + 122 NA promoter-TSS (FBgn0020497) protein_coding-promoter-TSS (FBgn0020497) -23 FBgn0020497 FBgn0020497 FBtr0079663 emb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2132 chr2R 4487439 4487554 + 122 NA promoter-TSS (FBgn0033310) protein_coding-promoter-TSS (FBgn0033310) -60 FBgn0033309 FBgn0033309 FBtr0088730 CG8735 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2999 chr2R 18694595 18694680 + 122 NA promoter-TSS (FBgn0000405) protein_coding-promoter-TSS (FBgn0000405) -147 FBgn0000405 FBgn0000405 FBtr0071914 CycB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_426 chr2L 6480495 6480574 + 122 NA promoter-TSS (FBgn0031820) protein_coding-promoter-TSS (FBgn0031820) -45 FBgn0086357 FBgn0086357 FBtr0079266 Sec61alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3519 chr3L 2466733 2466877 + 121 NA promoter-TSS (FBgn0035347) protein_coding-promoter-TSS (FBgn0035347) 8809 FBgn0035343 FBgn0035343 FBtr0072968 CG16762 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1582 chr2L 20783195 20783343 + 121 NA TTS (FBgn0000251) protein_coding-TTS (FBgn0000251) -4380 FBgn0032884 FBgn0032884 FBtr0081414 Pomp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1277 chr2L 17384653 17384720 + 121 NA promoter-TSS (FBgn0032633) protein_coding-promoter-TSS (FBgn0032633) -329 FBgn0020503 FBgn0020503 FBtr0332452 CLIP-190 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4370 chr3L 18752116 18752270 + 121 NA intron (FBgn0001078, intron 1 of 7) protein_coding-intron (FBgn0001078, intron 3 of 9) 6651 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2304 chr2R 7258640 7258729 + 121 NA promoter-TSS (FBgn0021795) protein_coding-promoter-TSS (FBgn0021795) -9 FBgn0021795 FBgn0021795 FBtr0088153 Tapdelta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4641 chr3R 1193988 1194071 + 120 NA promoter-TSS (FBgn0037315) protein_coding-promoter-TSS (FBgn0037315) -1233 FBgn0085306 FBgn0085306 FBtr0332160 CG34277 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7245 chrX 18264822 18264941 + 120 NA promoter-TSS (FBgn0014467) protein_coding-promoter-TSS (FBgn0014467) -730 FBgn0263769 FBgn0263769 FBtr0310488 CR43686 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7202 chrX 15213425 15213519 + 120 NA promoter-TSS (FBgn0004924) protein_coding-promoter-TSS (FBgn0004924) 552 FBgn0263548 FBgn0263548 FBtr0309667 mir-4957 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5192 chr3R 9486220 9486320 + 120 NA promoter-TSS (FBgn0004587) protein_coding-promoter-TSS (FBgn0004587) -29 FBgn0004237 FBgn0004237 FBtr0300590 Hrb87F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_497 chr2L 8031804 8031900 + 119 NA intron (FBgn0044323, intron 1 of 4) protein_coding-intron (FBgn0044323, intron 1 of 4) 1131 FBgn0044323 FBgn0044323 FBtr0079539 Cka protein_coding Nup98-S2-pascual-garcia2017_R1_peak_140 chr2L 1643523 1643668 + 119 NA Intergenic Intergenic -7663 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1167 chr2L 16310711 16310783 + 119 NA promoter-TSS (FBgn0001086) protein_coding-promoter-TSS (FBgn0001086) -65 FBgn0000339 FBgn0000339 FBtr0080849 cni protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7224 chrX 16971961 16972113 + 119 NA promoter-TSS (FBgn0030813) protein_coding-promoter-TSS (FBgn0030813) -107 FBgn0030812 FBgn0030812 FBtr0310525 CG8949 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1990 chr2R 1614367 1614666 + 119 NA promoter-TSS (FBgn0000099) protein_coding-promoter-TSS (FBgn0000099) -9962 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5839 chr3R 18406387 18406499 + 119 NA promoter-TSS (FBgn0028837) protein_coding-promoter-TSS (FBgn0028837) -54 FBgn0028837 FBgn0028837 FBtr0084265 CSN6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3779 chr3L 8435454 8435562 + 119 NA promoter-TSS (FBgn0263352) protein_coding-promoter-TSS (FBgn0263352) -3718 FBgn0263352 FBgn0263352 FBtr0076661 Unr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5893 chr3R 20097012 20097119 + 118 NA promoter-TSS (FBgn0011225) protein_coding-promoter-TSS (FBgn0011225) -112 FBgn0011225 FBgn0011225 FBtr0301369 jar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4380 chr3L 19084924 19085007 + 118 NA promoter-TSS (FBgn0036846) protein_coding-promoter-TSS (FBgn0036846) -805 FBgn0036846 FBgn0036846 FBtr0330090 MESR6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5859 chr3R 19052312 19052395 + 117 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) -4670 FBgn0262975 FBgn0262975 FBtr0308227 cnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6259 chr3R 24670821 24671008 + 117 NA promoter-TSS (FBgn0015589) protein_coding-promoter-TSS (FBgn0015589) -108 FBgn0264324 FBgn0264324 FBtr0330305 spg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_332 chr2L 4810165 4810332 + 117 NA Intergenic Intergenic -2761 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6916 chrUextra 8511220 8511335 + 116 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3580 chr3L 4364068 4364160 + 116 NA promoter-TSS (FBgn0035534) protein_coding-promoter-TSS (FBgn0035534) -12 FBgn0035533 FBgn0035533 FBtr0306533 Cip4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6284 chr3R 25145313 25145384 + 116 NA promoter-TSS (FBgn0015622) protein_coding-promoter-TSS (FBgn0015622) -12 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5217 chr3R 9913949 9914130 + 116 NA TTS (FBgn0038197) protein_coding-TTS (FBgn0038197) -2457 FBgn0038198 FBgn0038198 FBtr0082889 Npc2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5785 chr3R 17272166 17272401 + 115 NA promoter-TSS (FBgn0011278) protein_coding-promoter-TSS (FBgn0011278) -241 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_142 chr2L 1644498 1644628 + 115 NA Intergenic Intergenic -6695 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2019 chr2R 2389194 2389356 + 115 NA promoter-TSS (FBgn0086655) protein_coding-promoter-TSS (FBgn0086655) 31825 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_229 chr2L 3534342 3534418 + 115 NA Intergenic Intergenic 3591 FBgn0031550 FBgn0031550 FBtr0077529 Che-13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5202 chr3R 9700817 9701065 + 115 NA promoter-TSS (FBgn0008646) protein_coding-promoter-TSS (FBgn0008646) -303 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2715 chr2R 13709922 13710153 + 115 NA intron (FBgn0259211, intron 3 of 13) protein_coding-intron (FBgn0259211, intron 3 of 12) -1033 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_711 chr2L 11130700 11130782 + 115 NA promoter-TSS (FBgn0032348) protein_coding-promoter-TSS (FBgn0032348) 0 FBgn0032348 FBgn0032348 FBtr0080200 CG4751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4990 chr3R 6442438 6442791 + 115 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -11222 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2850 chr2R 15998602 15998935 + 115 NA promoter-TSS (FBgn0004364) protein_coding-promoter-TSS (FBgn0004364) -248 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_798 chr2L 12586901 12587201 + 115 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -31297 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7185 chrX 13307072 13307186 + 115 NA promoter-TSS (FBgn0030486) protein_coding-promoter-TSS (FBgn0030486) -146 FBgn0030486 FBgn0030486 FBtr0301559 Set2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2010 chr2R 2058968 2059273 + 115 NA promoter-TSS (FBgn0050316) tRNA-promoter-TSS (FBgn0050316) -47 FBgn0011890 FBgn0011890 FBtr0086007 tRNA:K2:42Ad tRNA Nup98-S2-pascual-garcia2017_R1_peak_4412 chr3L 20306687 20306766 + 115 NA promoter-TSS (FBgn0250791) protein_coding-promoter-TSS (FBgn0250791) -6 FBgn0250791 FBgn0250791 FBtr0074840 Snap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2773 chr2R 14690899 14691053 + 115 NA intron (FBgn0010651, intron 1 of 4) protein_coding-intron (FBgn0010651, intron 1 of 4) -1072 FBgn0010651 FBgn0010651 FBtr0086635 l(2)08717 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_809 chr2L 12655949 12656050 + 115 NA Intergenic Intergenic -9643 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5391 chr3R 12528567 12528889 + 115 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) 31620 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7103 chrX 8463145 8463283 + 115 NA exon (FBgn0030049, exon 6 of 6) protein_coding-exon (FBgn0030049, exon 6 of 6) 1767 FBgn0030050 FBgn0030050 FBtr0071232 CG12111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6672 chrM 2933 2997 + 115 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1418 chr2L 19114288 19114386 + 114 NA promoter-TSS (FBgn0002036) protein_coding-promoter-TSS (FBgn0002036) -64 FBgn0002036 FBgn0002036 FBtr0081155 CG10561 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7162 chrX 12649726 12649826 + 114 NA Intergenic Intergenic 4874 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7145 chrX 11415984 11416089 + 114 NA intron (FBgn0052666, intron 2 of 5) protein_coding-intron (FBgn0052666, intron 2 of 6) -25465 FBgn0262335 FBgn0262335 FBtr0304519 mir-2492 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2419 chr2R 8878455 8878530 + 114 NA Intergenic Intergenic -2910 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5075 chr3R 7774808 7774976 + 114 NA promoter-TSS (FBgn0051211) protein_coding-promoter-TSS (FBgn0051211) -41 FBgn0037963 FBgn0037963 FBtr0082513 Cad87A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7189 chrX 13534798 13534881 + 114 NA intron (FBgn0030505, intron 1 of 8) protein_coding-intron (FBgn0030505, intron 1 of 9) -4373 FBgn0030505 FBgn0030505 FBtr0301451 NFAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3953 chr3L 12139550 12139647 + 114 NA promoter-TSS (FBgn0013997) protein_coding-promoter-TSS (FBgn0013997) -21 FBgn0013997 FBgn0013997 FBtr0075999 Nrx-IV protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5940 chr3R 21719134 21719233 + 114 NA promoter-TSS (FBgn0039385) protein_coding-promoter-TSS (FBgn0039385) -36 FBgn0039385 FBgn0039385 FBtr0084938 CG5913 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6836 chrU 5299418 5299504 + 114 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5033 chr3R 7023883 7023978 + 114 NA TTS (FBgn0037870) protein_coding-TTS (FBgn0037870) 2104 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5469 chr3R 13429457 13429613 + 114 NA Intergenic Intergenic -2289 FBgn0038524 FBgn0038524 FBtr0305308 sll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4072 chr3L 14044233 14044364 + 113 NA promoter-TSS (FBgn0036405) protein_coding-promoter-TSS (FBgn0036405) -8 FBgn0036405 FBgn0036405 FBtr0302433 CG6833 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6059 chr3R 22895897 22896010 + 113 NA promoter-TSS (FBgn0003495) protein_coding-promoter-TSS (FBgn0003495) -161 FBgn0003495 FBgn0003495 FBtr0085146 spz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4133 chr3L 15097444 15097541 + 113 NA intron (FBgn0262707, intron 1 of 3) protein_coding-intron (FBgn0262707, intron 1 of 3) -1490 FBgn0262707 FBgn0262707 FBtr0075635 CTPsyn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_890 chr2L 13813770 13813845 + 113 NA promoter-TSS (FBgn0001965) protein_coding-promoter-TSS (FBgn0001965) -9 FBgn0001965 FBgn0001965 FBtr0080541 Sos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7070 chrX 5874963 5875034 + 113 NA intron (FBgn0029830, intron 2 of 9) protein_coding-intron (FBgn0029830, intron 2 of 9) -7847 FBgn0029831 FBgn0029831 FBtr0070866 CG5966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5215 chr3R 9881887 9881969 + 113 NA promoter-TSS (FBgn0038197) protein_coding-promoter-TSS (FBgn0038197) -762 FBgn0038197 FBgn0038197 FBtr0305052 foxo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_554 chr2L 8718101 8718178 + 113 NA intron (FBgn0003209, intron 1 of 8) protein_coding-intron (FBgn0003209, intron 1 of 8) 12567 FBgn0032061 FBgn0032061 FBtr0079731 CG9314 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7068 chrX 5813037 5813145 + 113 NA intron (FBgn0029824, intron 1 of 6) protein_coding-intron (FBgn0029824, intron 1 of 6) 1881 FBgn0029824 FBgn0029824 FBtr0070858 CG3726 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2136 chr2R 4520215 4520287 + 112 NA promoter-TSS (FBgn0033317) protein_coding-promoter-TSS (FBgn0033317) -784 FBgn0033317 FBgn0033317 FBtr0088727 CG8635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2392 chr2R 8324784 8324877 + 112 NA promoter-TSS (FBgn0033739) protein_coding-promoter-TSS (FBgn0033739) -10 FBgn0033739 FBgn0033739 FBtr0305076 Dyb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5036 chr3R 7047433 7047549 + 112 NA promoter-TSS (FBgn0020910) protein_coding-promoter-TSS (FBgn0020910) -125 FBgn0020910 FBgn0020910 FBtr0082347 RpL3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_341 chr2L 4997819 4997884 + 112 NA promoter-TSS (FBgn0053113) protein_coding-promoter-TSS (FBgn0053113) 7077 FBgn0053113 FBgn0053113 FBtr0301538 Rtnl1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_340 chr2L 4971449 4971539 + 112 NA promoter-TSS (FBgn0031659) protein_coding-promoter-TSS (FBgn0031659) -208 FBgn0031659 FBgn0031659 FBtr0078995 CG14043 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6053 chr3R 22773271 22773342 + 112 NA promoter-TSS (FBgn0039463) protein_coding-promoter-TSS (FBgn0039463) -1 FBgn0051070 FBgn0051070 FBtr0085086 tRNA:CR31070 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7077 chrX 6246193 6246319 + 112 NA promoter-TSS (FBgn0261955) protein_coding-promoter-TSS (FBgn0261955) -58 FBgn0261955 FBgn0261955 FBtr0070907 kdn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2000 chr2R 2008005 2008075 + 112 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) 11306 FBgn0000546 FBgn0000546 FBtr0086011 EcR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_161 chr2L 2010882 2010977 + 111 NA promoter-TSS (FBgn0051940) tRNA-promoter-TSS (FBgn0051940) 11 FBgn0051940 FBgn0051940 FBtr0077861 tRNA:CR31940 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2184 chr2R 5004048 5004123 + 111 NA promoter-TSS (FBgn0003612) protein_coding-promoter-TSS (FBgn0003612) 454 FBgn0003612 FBgn0003612 FBtr0088578 Su(var)2-10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4957 chr3R 5926409 5926496 + 111 NA promoter-TSS (FBgn0262459) pre_miRNA-promoter-TSS (FBgn0262459) -222 FBgn0262459 FBgn0262459 FBtr0304500 mir-34 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6270 chr3R 24938744 24938849 + 111 NA promoter-TSS (FBgn0039635) protein_coding-promoter-TSS (FBgn0039635) -31 FBgn0039635 FBgn0039635 FBtr0085368 CG11876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2915 chr2R 17210811 17210924 + 111 NA promoter-TSS (FBgn0020306) protein_coding-promoter-TSS (FBgn0020306) -48 FBgn0050394 FBgn0050394 FBtr0071614 CG30394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7257 chrX 19102217 19102297 + 111 NA promoter-TSS (FBgn0027603) protein_coding-promoter-TSS (FBgn0027603) -40 FBgn0027603 FBgn0027603 FBtr0074693 Ulp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3978 chr3L 12497309 12497383 + 111 NA promoter-TSS (FBgn0027936) protein_coding-promoter-TSS (FBgn0027936) -46 FBgn0027936 FBgn0027936 FBtr0075958 vih protein_coding Nup98-S2-pascual-garcia2017_R1_peak_451 chr2L 6914220 6914292 + 111 NA promoter-TSS (FBgn0011737) protein_coding-promoter-TSS (FBgn0011737) -118 FBgn0011737 FBgn0011737 FBtr0079371 wee protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5616 chr3R 15228803 15228877 + 110 NA promoter-TSS (FBgn0038704) protein_coding-promoter-TSS (FBgn0038704) 30 FBgn0086613 FBgn0086613 FBtr0083771 Ino80 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2541 chr2R 10686639 10686781 + 110 NA promoter-TSS (FBgn0001319) protein_coding-promoter-TSS (FBgn0001319) -2178 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4738 chr3R 2617253 2617421 + 110 NA promoter-TSS (FBgn0000439) protein_coding-promoter-TSS (FBgn0000439) -221 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_613 chr2L 8958405 8958473 + 110 NA promoter-TSS (FBgn0032079) protein_coding-promoter-TSS (FBgn0032079) -2632 FBgn0032079 FBgn0032079 FBtr0303885 CG31886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_364 chr2L 5421636 5421741 + 110 NA Intergenic Intergenic -10154 FBgn0263866 FBgn0263866 FBtr0329835 CR43713 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4080 chr3L 14124873 14125032 + 110 NA promoter-TSS (FBgn0042630) protein_coding-promoter-TSS (FBgn0042630) -555 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5909 chr3R 20696556 20696645 + 109 NA promoter-TSS (FBgn0015625) protein_coding-promoter-TSS (FBgn0015625) 17 FBgn0015625 FBgn0015625 FBtr0084728 CycB3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6966 chrUextra 28172266 28172327 + 109 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_878 chr2L 13571993 13572081 + 108 NA intron (FBgn0259984, intron 3 of 11) protein_coding-intron (FBgn0259984, intron 3 of 12) 21873 FBgn0259984 FBgn0259984 FBtr0301412 kuz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_645 chr2L 9699734 9699826 + 108 NA promoter-TSS (FBgn0015393) protein_coding-promoter-TSS (FBgn0015393) -11 FBgn0015393 FBgn0015393 FBtr0079846 hoip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3618 chr3L 5787229 5787327 + 108 NA promoter-TSS (FBgn0086694) protein_coding-promoter-TSS (FBgn0086694) 14 FBgn0086694 FBgn0086694 FBtr0077116 Bre1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2298 chr2R 7171431 7171527 + 108 NA promoter-TSS (FBgn0033608) protein_coding-promoter-TSS (FBgn0033608) -3 FBgn0033607 FBgn0033607 FBtr0332422 CG9062 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5348 chr3R 12050481 12050587 + 108 NA promoter-TSS (FBgn0040071) protein_coding-promoter-TSS (FBgn0040071) -18007 FBgn0040071 FBgn0040071 FBtr0083258 tara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5412 chr3R 12673028 12673177 + 107 NA intron (FBgn0263610, intron 5 of 7) ncRNA-intron (FBgn0263610, intron 4 of 6) -2624 FBgn0020546 FBgn0020546 FBtr0083363 iab-4 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4609 chr3R 678079 678323 + 107 NA promoter-TSS (FBgn0003002) protein_coding-promoter-TSS (FBgn0003002) -334 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2466 chr2R 9434510 9434576 + 107 NA promoter-TSS (FBgn0033853) protein_coding-promoter-TSS (FBgn0033853) 6123 FBgn0053156 FBgn0053156 FBtr0087684 CG33156 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5098 chr3R 8106608 8106781 + 107 NA promoter-TSS (FBgn0003651) protein_coding-promoter-TSS (FBgn0003651) -180 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6558 chr3RHet 790598 790699 + 107 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2792 chr2R 15029051 15029169 + 107 NA promoter-TSS (FBgn0000578) protein_coding-promoter-TSS (FBgn0000578) -2941 FBgn0263290 FBgn0263290 FBtr0308635 CR43399 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2880 chr2R 16554781 16554856 + 107 NA promoter-TSS (FBgn0034542) protein_coding-promoter-TSS (FBgn0034542) -1675 FBgn0034542 FBgn0034542 FBtr0086246 Fem-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4663 chr3R 1568440 1568527 + 106 NA promoter-TSS (FBgn0037371) protein_coding-promoter-TSS (FBgn0037371) 269 FBgn0027497 FBgn0027497 FBtr0078722 Madm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4073 chr3L 14046225 14046338 + 106 NA promoter-TSS (FBgn0052138) protein_coding-promoter-TSS (FBgn0052138) -38 FBgn0264718 FBgn0264718 FBtr0334052 CG43986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5481 chr3R 13526716 13526827 + 106 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) -13988 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7056 chrX 5324470 5324567 + 106 NA promoter-TSS (FBgn0029766) protein_coding-promoter-TSS (FBgn0029766) -195 FBgn0029766 FBgn0029766 FBtr0070777 CG15784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4213 chr3L 16378967 16379030 + 105 NA promoter-TSS (FBgn0036624) protein_coding-promoter-TSS (FBgn0036624) -89 FBgn0036623 FBgn0036623 FBtr0075420 CG4729 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5449 chr3R 13211515 13211579 + 105 NA promoter-TSS (FBgn0262871) protein_coding-promoter-TSS (FBgn0262871) -79 FBgn0262871 FBgn0262871 FBtr0330037 lute protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6997 chrX 1519540 1519612 + 105 NA intron (FBgn0000210, intron 3 of 8) protein_coding-intron (FBgn0000210, intron 2 of 7) -7388 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5878 chr3R 19606625 19606883 + 105 NA promoter-TSS (FBgn0015513) protein_coding-promoter-TSS (FBgn0015513) 377 FBgn0039120 FBgn0039120 FBtr0304567 Nup98-96 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3468 chr3L 1368459 1368526 + 105 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -2136 FBgn0003295 FBgn0003295 FBtr0072681 ru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4944 chr3R 5754393 5754458 + 105 NA promoter-TSS (FBgn0263097) protein_coding-promoter-TSS (FBgn0263097) 54022 FBgn0263097 FBgn0263097 FBtr0114583 Glut4EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2894 chr2R 16772044 16772164 + 104 NA exon (FBgn0015524, exon 6 of 6) protein_coding-exon (FBgn0015524, exon 6 of 6) 4669 FBgn0034558 FBgn0034558 FBtr0304717 CG9236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2410 chr2R 8771966 8772110 + 104 NA exon (FBgn0003975, exon 1 of 8) protein_coding-exon (FBgn0003975, exon 1 of 8) 332 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2699 chr2R 13469023 13469104 + 103 NA promoter-TSS (FBgn0034246) protein_coding-promoter-TSS (FBgn0034246) -32 FBgn0034246 FBgn0034246 FBtr0086904 Dcr-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6915 chrUextra 8511089 8511176 + 103 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3753 chr3L 7908191 7908280 + 103 NA promoter-TSS (FBgn0052368) protein_coding-promoter-TSS (FBgn0052368) -17 FBgn0035825 FBgn0035825 FBtr0076770 CG8111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7114 chrX 8701007 8701100 + 102 NA Intergenic Intergenic -21667 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2793 chr2R 15141471 15141671 + 102 NA promoter-TSS (FBgn0053453) protein_coding-promoter-TSS (FBgn0053453) -881 FBgn0053453 FBgn0053453 FBtr0086564 CG33453 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6112 chr3R 23477569 23477654 + 102 NA promoter-TSS (FBgn0027494) protein_coding-promoter-TSS (FBgn0027494) -871 FBgn0027494 FBgn0027494 FBtr0085194 RpS10a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7148 chrX 11908318 11908403 + 102 NA promoter-TSS (FBgn0030362) protein_coding-promoter-TSS (FBgn0030362) -1178 FBgn0030362 FBgn0030362 FBtr0073578 regucalcin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1113 chr2L 15643901 15644009 + 102 NA TTS (FBgn0028863) protein_coding-TTS (FBgn0028863) 13871 FBgn0028518 FBgn0028518 FBtr0080755 CG18480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3452 chr3L 1102607 1102696 + 102 NA Intergenic Intergenic -1562 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5776 chr3R 17211983 17212094 + 102 NA Intergenic Intergenic -2567 FBgn0004862 FBgn0004862 FBtr0084087 bap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1184 chr2L 16486430 16486580 + 102 NA promoter-TSS (FBgn0005677) protein_coding-promoter-TSS (FBgn0005677) -521 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2061 chr2R 3306106 3306316 + 102 NA promoter-TSS (FBgn0003460) protein_coding-promoter-TSS (FBgn0003460) -326 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6675 chrM 4730 4793 + 102 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4836 chr3R 3965928 3966036 + 102 NA promoter-TSS (FBgn0011962) tRNA-promoter-TSS (FBgn0011962) 35 FBgn0011962 FBgn0011962 FBtr0081812 tRNA:R2:84Fd tRNA Nup98-S2-pascual-garcia2017_R1_peak_3541 chr3L 3071822 3071896 + 102 NA promoter-TSS (FBgn0035397) protein_coding-promoter-TSS (FBgn0035397) -1020 FBgn0052486 FBgn0052486 FBtr0073004 CG32486 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4768 chr3R 2863181 2863352 + 102 NA Intergenic Intergenic -14791 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7221 chrX 16617532 16617663 + 102 NA intron (FBgn0052572, intron 2 of 3) protein_coding-intron (FBgn0052572, intron 2 of 3) -2157 FBgn0085354 FBgn0085354 FBtr0112527 CG34325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2353 chr2R 7712723 7712830 + 102 NA promoter-TSS (FBgn0033653) protein_coding-promoter-TSS (FBgn0033653) -94 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3728 chr3L 7332530 7332601 + 102 NA promoter-TSS (FBgn0011640) protein_coding-promoter-TSS (FBgn0011640) 1 FBgn0011640 FBgn0011640 FBtr0076842 lark protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4061 chr3L 13838506 13838621 + 102 NA promoter-TSS (FBgn0029167) protein_coding-promoter-TSS (FBgn0029167) -591 FBgn0029167 FBgn0029167 FBtr0333020 Hml protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6771 chrU 1393684 1393768 + 102 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3035 chr2R 19289819 19289900 + 102 NA promoter-TSS (FBgn0034859) protein_coding-promoter-TSS (FBgn0034859) -27 FBgn0034859 FBgn0034859 FBtr0072027 CG3520 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7030 chrX 3440075 3440147 + 102 NA promoter-TSS (FBgn0085364) ncRNA-promoter-TSS (FBgn0085364) 32 FBgn0085364 FBgn0085364 FBtr0307366 CR34335 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_243 chr2L 3662441 3662614 + 102 NA promoter-TSS (FBgn0085369) protein_coding-promoter-TSS (FBgn0085369) -218 FBgn0085369 FBgn0085369 FBtr0302391 CG34340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_997 chr2L 14706414 14706499 + 102 NA Intergenic Intergenic -6209 FBgn0028855 FBgn0028855 FBtr0302946 CG15282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_551 chr2L 8662451 8662555 + 102 NA exon (FBgn0011259, exon 18 of 22) protein_coding-exon (FBgn0011259, exon 18 of 22) -10649 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6838 chrU 5301799 5301860 + 102 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2571 chr2R 11227139 11227378 + 102 NA TTS (FBgn0034012) protein_coding-TTS (FBgn0034012) 8152 FBgn0034012 FBgn0034012 FBtr0114456 Hr51 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3597 chr3L 4840729 4840818 + 102 NA promoter-TSS (FBgn0035578) protein_coding-promoter-TSS (FBgn0035578) -677 FBgn0035578 FBgn0035578 FBtr0308822 CG13707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4854 chr3R 4159717 4159799 + 102 NA promoter-TSS (FBgn0003129) protein_coding-promoter-TSS (FBgn0003129) -244 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_510 chr2L 8478081 8478283 + 102 NA promoter-TSS (FBgn0262029) protein_coding-promoter-TSS (FBgn0262029) 833 FBgn0053194 FBgn0053194 FBtr0079676 CheA29a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5907 chr3R 20613111 20613196 + 102 NA promoter-TSS (FBgn0039223) protein_coding-promoter-TSS (FBgn0039223) -1 FBgn0039223 FBgn0039223 FBtr0084743 CG5805 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6732 chrU 261886 261970 + 102 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3792 chr3L 8691083 8691158 + 102 NA Intergenic Intergenic 22205 FBgn0011509 FBgn0011509 FBtr0076598 SrpRbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4989 chr3R 6440064 6440413 + 102 NA promoter-TSS (FBgn0001235) protein_coding-promoter-TSS (FBgn0001235) -8846 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6852 chrU 6904906 6904973 + 102 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4608 chr3R 661116 661269 + 102 NA Intergenic Intergenic -4173 FBgn0037284 FBgn0037284 FBtr0078873 CG14659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5778 chr3R 17234264 17234332 + 102 NA promoter-TSS (FBgn0051438) protein_coding-promoter-TSS (FBgn0051438) -547 FBgn0051438 FBgn0051438 FBtr0084090 CheB93b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4996 chr3R 6490841 6490960 + 102 NA Intergenic Intergenic 8732 FBgn0085333 FBgn0085333 FBtr0112500 CG34304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_60 chr2L 1006606 1006690 + 102 NA Intergenic Intergenic 20242 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5352 chr3R 12185050 12185124 + 101 NA promoter-TSS (FBgn0038421) protein_coding-promoter-TSS (FBgn0038421) -47 FBgn0038421 FBgn0038421 FBtr0083323 CG17931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2732 chr2R 14013298 14013367 + 101 NA promoter-TSS (FBgn0028983) protein_coding-promoter-TSS (FBgn0028983) 5 FBgn0003520 FBgn0003520 FBtr0301614 stau protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2284 chr2R 6707411 6707510 + 101 NA promoter-TSS (FBgn0029134) protein_coding-promoter-TSS (FBgn0029134) -26 FBgn0029134 FBgn0029134 FBtr0088225 Prosbeta5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6888 chrUextra 593228 593511 + 101 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6389 chr3R 25883956 25884019 + 101 NA promoter-TSS (FBgn0015542) protein_coding-promoter-TSS (FBgn0015542) -50 FBgn0015542 FBgn0015542 FBtr0114597 sima protein_coding Nup98-S2-pascual-garcia2017_R1_peak_521 chr2L 8543246 8543333 + 101 NA promoter-TSS (FBgn0011259) protein_coding-promoter-TSS (FBgn0011259) -41 FBgn0011259 FBgn0011259 FBtr0329930 Sema-1a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_772 chr2L 12097780 12097860 + 100 NA promoter-TSS (FBgn0032409) protein_coding-promoter-TSS (FBgn0032409) -23 FBgn0032409 FBgn0032409 FBtr0080330 Ced-12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_352 chr2L 5306447 5306518 + 100 NA intron (FBgn0016076, intron 1 of 2) protein_coding-intron (FBgn0016076, intron 1 of 2) 760 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2583 chr2R 11419759 11419916 + 100 NA promoter-TSS (FBgn0019968) protein_coding-promoter-TSS (FBgn0019968) -78 FBgn0019968 FBgn0019968 FBtr0329957 Khc-73 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2560 chr2R 11035296 11035406 + 100 NA promoter-TSS (FBgn0033994) protein_coding-promoter-TSS (FBgn0033994) -14 FBgn0033994 FBgn0033994 FBtr0300324 CG7544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4600 chr3R 485182 485297 + 100 NA promoter-TSS (FBgn0263346) protein_coding-promoter-TSS (FBgn0263346) -66 FBgn0263346 FBgn0263346 FBtr0308853 CG43427 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3703 chr3L 6982044 6982258 + 100 NA Intergenic Intergenic -1571 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6143 chr3R 23773708 23773820 + 100 NA promoter-TSS (FBgn0039562) protein_coding-promoter-TSS (FBgn0039562) -33 FBgn0039561 FBgn0039561 FBtr0085266 mfrn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6049 chr3R 22640117 22640177 + 100 NA intron (FBgn0262473, intron 2 of 4) protein_coding-intron (FBgn0262473, intron 1 of 3) 9913 FBgn0086060 FBgn0086060 FBtr0114336 snoRNA:Me28S-U1554 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6976 chrUextra 28929888 28929951 + 100 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2161 chr2R 4815598 4815682 + 99 NA promoter-TSS (FBgn0033352) protein_coding-promoter-TSS (FBgn0033352) -30 FBgn0033351 FBgn0033351 FBtr0088676 CG8235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3511 chr3L 2237058 2237149 + 99 NA promoter-TSS (FBgn0040507) protein_coding-promoter-TSS (FBgn0040507) -27 FBgn0035318 FBgn0035318 FBtr0072909 CG9018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6009 chr3R 22361947 22362043 + 99 NA promoter-TSS (FBgn0263289) protein_coding-promoter-TSS (FBgn0263289) -77 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3818 chr3L 9066149 9066231 + 99 NA promoter-TSS (FBgn0035960) protein_coding-promoter-TSS (FBgn0035960) -15 FBgn0035960 FBgn0035960 FBtr0076524 CG4942 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4171 chr3L 15830537 15830629 + 99 NA promoter-TSS (FBgn0036538) protein_coding-promoter-TSS (FBgn0036538) -1 FBgn0036538 FBgn0036538 FBtr0075536 CG15715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3877 chr3L 10654087 10654151 + 99 NA promoter-TSS (FBgn0036096) protein_coding-promoter-TSS (FBgn0036096) -456 FBgn0036096 FBgn0036096 FBtr0076260 CG8003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2116 chr2R 4214684 4214861 + 99 NA promoter-TSS (FBgn0261588) protein_coding-promoter-TSS (FBgn0261588) -233 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2341 chr2R 7548110 7548176 + 98 NA promoter-TSS (FBgn0011916) tRNA-promoter-TSS (FBgn0011916) -3 FBgn0011916 FBgn0011916 FBtr0088086 tRNA:M2:48Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_5077 chr3R 7800626 7800710 + 98 NA promoter-TSS (FBgn0260744) protein_coding-promoter-TSS (FBgn0260744) -81 FBgn0260744 FBgn0260744 FBtr0082508 Tango9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4415 chr3L 20466470 20466537 + 98 NA promoter-TSS (FBgn0036998) protein_coding-promoter-TSS (FBgn0036998) -31 FBgn0052428 FBgn0052428 FBtr0078222 CG32428 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7136 chrX 10496313 10496502 + 97 NA promoter-TSS (FBgn0030218) protein_coding-promoter-TSS (FBgn0030218) -728 FBgn0030218 FBgn0030218 FBtr0071510 CG1628 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5764 chr3R 16899019 16899142 + 97 NA promoter-TSS (FBgn0038851) protein_coding-promoter-TSS (FBgn0038851) -39 FBgn0003257 FBgn0003257 FBtr0084038 r-l protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2434 chr2R 9055537 9055620 + 97 NA promoter-TSS (FBgn0086532) protein_coding-promoter-TSS (FBgn0086532) -43 FBgn0033799 FBgn0033799 FBtr0310155 GLaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7206 chrX 15604603 15604693 + 97 NA promoter-TSS (FBgn0030673) protein_coding-promoter-TSS (FBgn0030673) -480 FBgn0030673 FBgn0030673 FBtr0074055 CG15601 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7143 chrX 11317610 11317703 + 97 NA promoter-TSS (FBgn0001145) protein_coding-promoter-TSS (FBgn0001145) -335 FBgn0001145 FBgn0001145 FBtr0073496 Gs2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_44 chr2L 821355 821434 + 97 NA promoter-TSS (FBgn0031285) protein_coding-promoter-TSS (FBgn0031285) -28 FBgn0031285 FBgn0031285 FBtr0305507 CG3662 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1187 chr2L 16533012 16533106 + 96 NA promoter-TSS (FBgn0032587) protein_coding-promoter-TSS (FBgn0032587) -4137 FBgn0086038 FBgn0086038 FBtr0114314 snoRNA:Me28S-C1237 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_757 chr2L 11808055 11808127 + 96 NA exon (FBgn0020309, exon 1 of 8) protein_coding-exon (FBgn0020309, exon 1 of 8) 881 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3460 chr3L 1178174 1178431 + 96 NA Intergenic Intergenic -1026 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_174 chr2L 2365280 2365387 + 96 NA promoter-TSS (FBgn0261647) protein_coding-promoter-TSS (FBgn0261647) -261 FBgn0261647 FBgn0261647 FBtr0330666 Axud1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5730 chr3R 16461090 16461182 + 96 NA promoter-TSS (FBgn0015279) protein_coding-promoter-TSS (FBgn0015279) -706 FBgn0015279 FBgn0015279 FBtr0083941 Pi3K92E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2458 chr2R 9318467 9318584 + 96 NA promoter-TSS (FBgn0011882) tRNA-promoter-TSS (FBgn0011882) 36 FBgn0011882 FBgn0011882 FBtr0087658 tRNA:I:49Fb tRNA Nup98-S2-pascual-garcia2017_R1_peak_369 chr2L 5461477 5461591 + 96 NA promoter-TSS (FBgn0261963) protein_coding-promoter-TSS (FBgn0261963) -107 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6450 chr3R 26879620 26879708 + 96 NA promoter-TSS (FBgn0010808) protein_coding-promoter-TSS (FBgn0010808) -27 FBgn0010808 FBgn0010808 FBtr0085745 l(3)03670 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2340 chr2R 7545359 7545531 + 96 NA intron (FBgn0044020, intron 3 of 3) protein_coding-intron (FBgn0044020, intron 2 of 2) 2695 FBgn0011916 FBgn0011916 FBtr0088086 tRNA:M2:48Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4354 chr3L 18236821 18236893 + 96 NA Intergenic Intergenic -8331 FBgn0036783 FBgn0036783 FBtr0075129 CheA75a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1352 chr2L 18152393 18152536 + 96 NA promoter-TSS (FBgn0032668) protein_coding-promoter-TSS (FBgn0032668) -54 FBgn0041184 FBgn0041184 FBtr0329929 Socs36E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2677 chr2R 13032782 13032845 + 96 NA promoter-TSS (FBgn0050235) tRNA-promoter-TSS (FBgn0050235) 8 FBgn0050235 FBgn0050235 FBtr0086988 tRNA:CR30235 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6052 chr3R 22771079 22771239 + 96 NA promoter-TSS (FBgn0039462) protein_coding-promoter-TSS (FBgn0039462) -97 FBgn0039462 FBgn0039462 FBtr0085067 CG14252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_407 chr2L 5999442 5999558 + 95 NA promoter-TSS (FBgn0031759) protein_coding-promoter-TSS (FBgn0031759) 1 FBgn0031759 FBgn0031759 FBtr0079232 lid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2467 chr2R 9441502 9441570 + 95 NA promoter-TSS (FBgn0014877) protein_coding-promoter-TSS (FBgn0014877) -51 FBgn0014877 FBgn0014877 FBtr0087675 Roe1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4309 chr3L 17605552 17605630 + 95 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 6834 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2495 chr2R 9844450 9844516 + 95 NA intron (FBgn0262739, intron 2 of 7) protein_coding-intron (FBgn0262739, intron 2 of 7) 1111 FBgn0262739 FBgn0262739 FBtr0087613 AGO1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3296 chr2RHet 1928248 1928336 + 95 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3952 chr3L 12131543 12131598 + 95 NA promoter-TSS (FBgn0036257) protein_coding-promoter-TSS (FBgn0036257) 3 FBgn0011455 FBgn0011455 FBtr0334094 l(3)neo18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7135 chrX 10219964 10220044 + 94 NA promoter-TSS (FBgn0030189) protein_coding-promoter-TSS (FBgn0030189) -493 FBgn0030189 FBgn0030189 FBtr0071441 CG2909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3066 chr2R 19794816 19794891 + 94 NA promoter-TSS (FBgn0261794) protein_coding-promoter-TSS (FBgn0261794) -395 FBgn0015268 FBgn0015268 FBtr0305990 Nap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7011 chrX 1988182 1988259 + 94 NA promoter-TSS (FBgn0000382) protein_coding-promoter-TSS (FBgn0000382) -47 FBgn0000382 FBgn0000382 FBtr0070380 csw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7237 chrX 18137851 18138044 + 94 NA promoter-TSS (FBgn0030904) protein_coding-promoter-TSS (FBgn0030904) -630 FBgn0030904 FBgn0030904 FBtr0300182 upd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5263 chr3R 11039362 11039440 + 94 NA promoter-TSS (FBgn0038302) protein_coding-promoter-TSS (FBgn0038302) -21 FBgn0038301 FBgn0038301 FBtr0083139 CG6654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2944 chr2R 17494596 17494657 + 94 NA promoter-TSS (FBgn0034638) protein_coding-promoter-TSS (FBgn0034638) -168 FBgn0034638 FBgn0034638 FBtr0071691 CG10433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2654 chr2R 12471530 12471676 + 93 NA intron (FBgn0016131, intron 3 of 6) protein_coding-intron (FBgn0016131, intron 3 of 6) -1996 FBgn0003274 FBgn0003274 FBtr0087105 RpLP2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4903 chr3R 4834109 4834192 + 93 NA promoter-TSS (FBgn0037654) protein_coding-promoter-TSS (FBgn0037654) -7 FBgn0037654 FBgn0037654 FBtr0081966 CG11983 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4291 chr3L 17523153 17523226 + 93 NA promoter-TSS (FBgn0036735) protein_coding-promoter-TSS (FBgn0036735) 8 FBgn0259174 FBgn0259174 FBtr0299642 Nedd4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1609 chr2L 21221215 21221319 + 93 NA promoter-TSS (FBgn0032935) protein_coding-promoter-TSS (FBgn0032935) -45 FBgn0026577 FBgn0026577 FBtr0331677 CG8677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1611 chr2L 21250499 21250605 + 93 NA intron (FBgn0261239, intron 2 of 7) protein_coding-intron (FBgn0261239, intron 2 of 4) -10616 FBgn0021856 FBgn0021856 FBtr0081482 l(2)k14505 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2337 chr2R 7519235 7519324 + 93 NA intron (FBgn0033638, intron 1 of 7) protein_coding-intron (FBgn0033638, intron 1 of 7) 9139 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_556 chr2L 8740645 8740720 + 93 NA promoter-TSS (FBgn0003209) protein_coding-promoter-TSS (FBgn0003209) -22 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3803 chr3L 8967569 8967645 + 93 NA promoter-TSS (FBgn0035947) protein_coding-promoter-TSS (FBgn0035947) -90 FBgn0086706 FBgn0086706 FBtr0076558 pix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7220 chrX 16534877 16535001 + 93 NA promoter-TSS (FBgn0030766) protein_coding-promoter-TSS (FBgn0030766) 1 FBgn0030766 FBgn0030766 FBtr0074314 mthl1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4239 chr3L 16801426 16801501 + 92 NA promoter-TSS (FBgn0021768) protein_coding-promoter-TSS (FBgn0021768) 3369 FBgn0021768 FBgn0021768 FBtr0075328 nudC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6871 chrUextra 206355 206503 + 92 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6063 chr3R 22977273 22977365 + 92 NA promoter-TSS (FBgn0029155) protein_coding-promoter-TSS (FBgn0029155) -44 FBgn0029155 FBgn0029155 FBtr0301707 Men-b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1403 chr2L 18968713 18968784 + 91 NA promoter-TSS (FBgn0032728) protein_coding-promoter-TSS (FBgn0032728) -27 FBgn0015772 FBgn0015772 FBtr0081189 Nak protein_coding Nup98-S2-pascual-garcia2017_R1_peak_500 chr2L 8104146 8104233 + 91 NA intron (FBgn0261822, intron 4 of 9) protein_coding-intron (FBgn0261822, intron 2 of 6) 15885 FBgn0261822 FBgn0261822 FBtr0079573 Bsg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5877 chr3R 19606189 19606526 + 91 NA exon (FBgn0039120, exon 2 of 9) protein_coding-exon (FBgn0039120, exon 2 of 9) 774 FBgn0039120 FBgn0039120 FBtr0304567 Nup98-96 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2133 chr2R 4487854 4487933 + 91 NA promoter-TSS (FBgn0033310) protein_coding-promoter-TSS (FBgn0033310) -45 FBgn0033310 FBgn0033310 FBtr0301542 rgr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_410 chr2L 6127638 6127702 + 91 NA promoter-TSS (FBgn0031782) protein_coding-promoter-TSS (FBgn0031782) -17 FBgn0031782 FBgn0031782 FBtr0333407 WDR79 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5547 chr3R 14299875 14300002 + 91 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) -62585 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4426 chr3L 21024872 21024952 + 91 NA promoter-TSS (FBgn0028402) protein_coding-promoter-TSS (FBgn0028402) -13 FBgn0028402 FBgn0028402 FBtr0304820 Sin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_862 chr2L 13322128 13322192 + 90 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) 8961 FBgn0264308 FBgn0264308 FBtr0331504 CG43778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5870 chr3R 19427090 19427204 + 90 NA promoter-TSS (FBgn0051143) tRNA-promoter-TSS (FBgn0051143) 30 FBgn0051143 FBgn0051143 FBtr0084482 tRNA:CR31143 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6261 chr3R 24756118 24756287 + 90 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 7436 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_819 chr2L 12692917 12693019 + 90 NA promoter-TSS (FBgn0032445) protein_coding-promoter-TSS (FBgn0032445) -18 FBgn0032445 FBgn0032445 FBtr0300275 CG6153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3451 chr3L 1102351 1102476 + 90 NA Intergenic Intergenic -1324 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2690 chr2R 13279263 13279374 + 90 NA promoter-TSS (FBgn0011879) tRNA-promoter-TSS (FBgn0011879) 32 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2974 chr2R 18221946 18222003 + 90 NA TTS (FBgn0085237) protein_coding-TTS (FBgn0085237) 1343 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2559 chr2R 11017257 11017342 + 90 NA intron (FBgn0015371, intron 1 of 5) protein_coding-intron (FBgn0015371, intron 1 of 4) 14537 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5831 chr3R 18223229 18223328 + 90 NA promoter-TSS (FBgn0051166) tRNA-promoter-TSS (FBgn0051166) -16 FBgn0051166 FBgn0051166 FBtr0084223 tRNA:CR31166 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5595 chr3R 14839910 14840006 + 90 NA intron (FBgn0026239, intron 4 of 4) protein_coding-intron (FBgn0026239, intron 4 of 4) 9786 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6567 chr3RHet 1129168 1129236 + 90 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3987 chr3L 12602403 12602722 + 90 NA promoter-TSS (FBgn0015919) protein_coding-promoter-TSS (FBgn0015919) -169 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_879 chr2L 13642021 13642092 + 90 NA exon (FBgn0028546, exon 2 of 5) protein_coding-exon (FBgn0028546, exon 2 of 5) 304 FBgn0028546 FBgn0028546 FBtr0080511 ics protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7017 chrX 2482479 2482567 + 90 NA promoter-TSS (FBgn0001404) protein_coding-promoter-TSS (FBgn0001404) 2513 FBgn0040066 FBgn0040066 FBtr0070438 wds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5108 chr3R 8214849 8214917 + 90 NA TTS (FBgn0053098) protein_coding-TTS (FBgn0053098) 311 FBgn0085431 FBgn0085431 FBtr0112656 CG34402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_974 chr2L 14581034 14581138 + 90 NA Intergenic Intergenic 7148 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4211 chr3L 16345044 16345118 + 90 NA promoter-TSS (FBgn0036615) protein_coding-promoter-TSS (FBgn0036615) -10 FBgn0036615 FBgn0036615 FBtr0075381 CG4933 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_734 chr2L 11445729 11445809 + 90 NA promoter-TSS (FBgn0261648) protein_coding-promoter-TSS (FBgn0261648) -166 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7164 chrX 12658816 12658884 + 90 NA promoter-TSS (FBgn0030421) protein_coding-promoter-TSS (FBgn0030421) -1206 FBgn0030420 FBgn0030420 FBtr0073704 CG12717 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_230 chr2L 3539501 3539628 + 90 NA promoter-TSS (FBgn0024244) protein_coding-promoter-TSS (FBgn0024244) -171 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2703 chr2R 13504087 13504446 + 90 NA promoter-TSS (FBgn0082922) snoRNA-promoter-TSS (FBgn0082922) 5 FBgn0082922 FBgn0082922 FBtr0113512 snoRNA:Or-aca4 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4745 chr3R 2675775 2675858 + 90 NA promoter-TSS (FBgn0003339) protein_coding-promoter-TSS (FBgn0003339) -113 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2148 chr2R 4647265 4647327 + 90 NA TTS (FBgn0027585) protein_coding-TTS (FBgn0027585) 22421 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7111 chrX 8699891 8699993 + 90 NA promoter-TSS (FBgn0026411) protein_coding-promoter-TSS (FBgn0026411) -20556 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2004 chr2R 2040086 2040213 + 90 NA promoter-TSS (FBgn0011938) tRNA-promoter-TSS (FBgn0011938) 32 FBgn0011938 FBgn0011938 FBtr0086016 tRNA:N5:42Ah tRNA Nup98-S2-pascual-garcia2017_R1_peak_3759 chr3L 8059133 8059205 + 90 NA promoter-TSS (FBgn0052362) tRNA-promoter-TSS (FBgn0052362) 7 FBgn0052362 FBgn0052362 FBtr0076740 tRNA:CR32362 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3095 chr2R 20427012 20427089 + 90 NA promoter-TSS (FBgn0035023) protein_coding-promoter-TSS (FBgn0035023) 3337 FBgn0035022 FBgn0035022 FBtr0072305 CG11413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3571 chr3L 4003408 4003501 + 90 NA promoter-TSS (FBgn0035482) protein_coding-promoter-TSS (FBgn0035482) -26 FBgn0035482 FBgn0035482 FBtr0307170 CG14985 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5035 chr3R 7047172 7047227 + 89 NA promoter-TSS (FBgn0020910) protein_coding-promoter-TSS (FBgn0020910) 162 FBgn0037878 FBgn0037878 FBtr0082367 CG6693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6940 chrUextra 18119464 18119682 + 89 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_212 chr2L 3169559 3169669 + 89 NA promoter-TSS (FBgn0011985) tRNA-promoter-TSS (FBgn0011985) 32 FBgn0011985 FBgn0011985 FBtr0077577 tRNA:S7:23Eb tRNA Nup98-S2-pascual-garcia2017_R1_peak_2140 chr2R 4611324 4611396 + 89 NA promoter-TSS (FBgn0005695) protein_coding-promoter-TSS (FBgn0005695) -225 FBgn0040777 FBgn0040777 FBtr0088720 CG14767 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_425 chr2L 6473906 6473989 + 89 NA promoter-TSS (FBgn0259749) protein_coding-promoter-TSS (FBgn0259749) -1877 FBgn0259749 FBgn0259749 FBtr0079269 mmy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2487 chr2R 9716821 9716908 + 89 NA intron (FBgn0033872, intron 1 of 3) protein_coding-intron (FBgn0033872, intron 1 of 3) 2398 FBgn0033872 FBgn0033872 FBtr0087635 CG6329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_899 chr2L 14022455 14022581 + 88 NA Intergenic Intergenic -2310 FBgn0001967 FBgn0001967 FBtr0290243 nimC3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1612 chr2L 21250773 21250990 + 88 NA intron (FBgn0261239, intron 2 of 7) protein_coding-intron (FBgn0261239, intron 2 of 4) -10287 FBgn0021856 FBgn0021856 FBtr0081482 l(2)k14505 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2059 chr2R 3283416 3283496 + 88 NA promoter-TSS (FBgn0033162) protein_coding-promoter-TSS (FBgn0033162) -19 FBgn0033162 FBgn0033162 FBtr0089013 CG1707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3117 chr2R 20744877 20744970 + 88 NA Intergenic Intergenic 8424 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_144 chr2L 1710432 1710500 + 88 NA promoter-TSS (FBgn0031357) protein_coding-promoter-TSS (FBgn0031357) 4 FBgn0031357 FBgn0031357 FBtr0333542 mRpL48 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3752 chr3L 7905003 7905094 + 88 NA promoter-TSS (FBgn0035824) protein_coding-promoter-TSS (FBgn0035824) -515 FBgn0035824 FBgn0035824 FBtr0076748 CG8281 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3425 chr3L 620997 621061 + 88 NA exon (FBgn0263042, exon 2 of 2) protein_coding-exon (FBgn0263042, exon 2 of 2) 1287 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2182 chr2R 4982672 4982758 + 88 NA promoter-TSS (FBgn0033374) protein_coding-promoter-TSS (FBgn0033374) -88 FBgn0083124 FBgn0083124 FBtr0300230 Uhg4 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7219 chrX 16504636 16504731 + 88 NA promoter-TSS (FBgn0025743) protein_coding-promoter-TSS (FBgn0025743) -54 FBgn0025743 FBgn0025743 FBtr0074285 mbt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5854 chr3R 18944099 18944173 + 88 NA promoter-TSS (FBgn0039056) protein_coding-promoter-TSS (FBgn0039056) 11 FBgn0039056 FBgn0039056 FBtr0084369 cenB1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7155 chrX 12618528 12618615 + 88 NA intron (FBgn0264678, intron 1 of 1) protein_coding-intron (FBgn0263865, intron 2 of 9) -6078 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4935 chr3R 5635040 5635154 + 88 NA promoter-TSS (FBgn0037760) protein_coding-promoter-TSS (FBgn0037760) -12 FBgn0037760 FBgn0037760 FBtr0082155 FBX011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5955 chr3R 21834074 21834135 + 88 NA Intergenic Intergenic -2359 FBgn0002733 FBgn0002733 FBtr0084982 HLHmbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4198 chr3L 16225119 16225188 + 88 NA promoter-TSS (FBgn0036580) protein_coding-promoter-TSS (FBgn0036580) -15 FBgn0036580 FBgn0036580 FBtr0075483 PDCD-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_228 chr2L 3534029 3534287 + 88 NA Intergenic Intergenic 3369 FBgn0031550 FBgn0031550 FBtr0077529 Che-13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2207 chr2R 5466942 5467020 + 88 NA promoter-TSS (FBgn0033426) protein_coding-promoter-TSS (FBgn0033426) 26 FBgn0033426 FBgn0033426 FBtr0088523 CG1814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2138 chr2R 4539235 4539336 + 88 NA intron (FBgn0003892, intron 1 of 5) protein_coding-intron (FBgn0003892, intron 1 of 5) 2145 FBgn0003892 FBgn0003892 FBtr0089427 ptc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_193 chr2L 2804889 2805014 + 88 NA promoter-TSS (FBgn0031461) protein_coding-promoter-TSS (FBgn0031461) -3370 FBgn0031461 FBgn0031461 FBtr0077721 daw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2950 chr2R 17771619 17771711 + 88 NA intron (FBgn0085397, intron 1 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 848 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4434 chr3L 21336800 21336879 + 87 NA promoter-TSS (FBgn0052436) protein_coding-promoter-TSS (FBgn0052436) -23 FBgn0037074 FBgn0037074 FBtr0078404 CG7324 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5472 chr3R 13445436 13445504 + 87 NA promoter-TSS (FBgn0051570) tRNA-promoter-TSS (FBgn0051570) 10 FBgn0051570 FBgn0051570 FBtr0083468 tRNA:CR31570 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6364 chr3R 25597565 25597646 + 87 NA intron (FBgn0001297, intron 1 of 2) protein_coding-intron (FBgn0001297, intron 1 of 2) 8848 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2712 chr2R 13654546 13654612 + 87 NA promoter-TSS (FBgn0263629) pre_miRNA-promoter-TSS (FBgn0263629) 133 FBgn0034277 FBgn0034277 FBtr0089559 CG6370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4902 chr3R 4832153 4832208 + 87 NA promoter-TSS (FBgn0037653) protein_coding-promoter-TSS (FBgn0037653) 6 FBgn0037653 FBgn0037653 FBtr0081965 CG11982 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1589 chr2L 20874725 20874783 + 87 NA intron (FBgn0263996, intron 8 of 10) protein_coding-intron (FBgn0032901, intron 8 of 10) 4900 FBgn0032900 FBgn0032900 FBtr0333010 CG14401 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5171 chr3R 9207768 9207850 + 87 NA promoter-TSS (FBgn0038145) protein_coding-promoter-TSS (FBgn0038145) -31 FBgn0038145 FBgn0038145 FBtr0082754 Droj2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4388 chr3L 19262066 19262142 + 87 NA promoter-TSS (FBgn0036859) protein_coding-promoter-TSS (FBgn0036859) -91 FBgn0036857 FBgn0036857 FBtr0075017 CG9629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2669 chr2R 12744753 12744858 + 86 NA promoter-TSS (FBgn0263462) snoRNA-promoter-TSS (FBgn0263462) -113 FBgn0263462 FBgn0263462 FBtr0309761 snoRNA:Dek-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_113 chr2L 1420365 1420598 + 86 NA promoter-TSS (FBgn0002543) protein_coding-promoter-TSS (FBgn0002543) -32 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5544 chr3R 14273873 14273956 + 86 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) -36561 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_287 chr2L 4332771 4332854 + 86 NA TTS (FBgn0028482) protein_coding-TTS (FBgn0028482) -1114 FBgn0020762 FBgn0020762 FBtr0112898 Atet protein_coding Nup98-S2-pascual-garcia2017_R1_peak_513 chr2L 8485727 8485832 + 86 NA promoter-TSS (FBgn0263489) ncRNA-promoter-TSS (FBgn0263489) 54 FBgn0263489 FBgn0263489 FBtr0309788 unsRNA:d-a ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2071 chr2R 3383757 3383841 + 86 NA promoter-TSS (FBgn0033183) protein_coding-promoter-TSS (FBgn0033183) 13 FBgn0033183 FBgn0033183 FBtr0300830 CG1620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3925 chr3L 11597353 11597423 + 85 NA exon (FBgn0036179, exon 4 of 4) protein_coding-exon (FBgn0036179, exon 4 of 4) 2857 FBgn0036179 FBgn0036179 FBtr0307115 CG7368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4238 chr3L 16780001 16780065 + 85 NA promoter-TSS (FBgn0025582) protein_coding-promoter-TSS (FBgn0025582) 8 FBgn0025582 FBgn0025582 FBtr0075345 Int6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7187 chrX 13392959 13393024 + 85 NA intron (FBgn0052635, intron 4 of 10) protein_coding-intron (FBgn0052635, intron 4 of 10) -21545 FBgn0030491 FBgn0030491 FBtr0273441 CG15753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2416 chr2R 8846564 8846673 + 85 NA Intergenic Intergenic 5557 FBgn0033787 FBgn0033787 FBtr0087792 CG13321 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1268 chr2L 17343009 17343136 + 85 NA Intergenic Intergenic 11596 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7080 chrX 6862759 6862838 + 85 NA promoter-TSS (FBgn0052732) protein_coding-promoter-TSS (FBgn0052732) -52 FBgn0052732 FBgn0052732 FBtr0071039 CG32732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6020 chr3R 22481288 22481385 + 85 NA promoter-TSS (FBgn0243586) protein_coding-promoter-TSS (FBgn0243586) -832 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5436 chr3R 12905905 12905965 + 85 NA promoter-TSS (FBgn0038476) protein_coding-promoter-TSS (FBgn0038476) -270 FBgn0038475 FBgn0038475 FBtr0083423 Keap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2134 chr2R 4519290 4519351 + 84 NA exon (FBgn0033317, exon 1 of 3) protein_coding-exon (FBgn0033317, exon 1 of 3) 147 FBgn0033317 FBgn0033317 FBtr0088727 CG8635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6953 chrUextra 24365801 24365887 + 84 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1405 chr2L 18987270 18987353 + 84 NA promoter-TSS (FBgn0032732) protein_coding-promoter-TSS (FBgn0032732) -35 FBgn0032731 FBgn0032731 FBtr0081185 CG10641 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4034 chr3L 13435636 13435718 + 84 NA promoter-TSS (FBgn0036365) protein_coding-promoter-TSS (FBgn0036365) -17 FBgn0036365 FBgn0036365 FBtr0075852 CG10732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4070 chr3L 13995184 13995259 + 84 NA promoter-TSS (FBgn0036398) protein_coding-promoter-TSS (FBgn0036398) -6 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_204 chr2L 3046796 3046894 + 84 NA promoter-TSS (FBgn0263847) ncRNA-promoter-TSS (FBgn0263847) 99 FBgn0263847 FBgn0263847 FBtr0321322 CR43708 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4062 chr3L 13855707 13855784 + 84 NA intron (FBgn0036381, intron 2 of 3) protein_coding-intron (FBgn0036381, intron 2 of 3) 4260 FBgn0036381 FBgn0036381 FBtr0075801 CG8745 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5892 chr3R 20078373 20078459 + 84 NA promoter-TSS (FBgn0039175) protein_coding-promoter-TSS (FBgn0039175) -15 FBgn0039175 FBgn0039175 FBtr0084637 CG5706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_555 chr2L 8734507 8734578 + 84 NA exon (FBgn0003209, exon 2 of 10) protein_coding-exon (FBgn0003209, exon 2 of 10) 6118 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2518 chr2R 10368597 10368725 + 84 NA promoter-TSS (FBgn0001332) protein_coding-promoter-TSS (FBgn0001332) -55 FBgn0001332 FBgn0001332 FBtr0087492 L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4228 chr3L 16704741 16704821 + 84 NA promoter-TSS (FBgn0063485) protein_coding-promoter-TSS (FBgn0063485) -4 FBgn0264605 FBgn0264605 FBtr0333628 CG43954 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5700 chr3R 16153676 16153785 + 83 NA promoter-TSS (FBgn0038788) protein_coding-promoter-TSS (FBgn0038788) -26 FBgn0038787 FBgn0038787 FBtr0113252 CG4360 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2078 chr2R 3680719 3680782 + 83 NA promoter-TSS (FBgn0002891) protein_coding-promoter-TSS (FBgn0002891) -7 FBgn0002891 FBgn0002891 FBtr0088831 mus205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3555 chr3L 3433200 3433273 + 83 NA intron (FBgn0026259, intron 7 of 8) protein_coding-intron (FBgn0026259, intron 7 of 8) -15309 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7258 chrX 19460098 19460218 + 83 NA promoter-TSS (FBgn0000257) protein_coding-promoter-TSS (FBgn0000257) 106 FBgn0000257 FBgn0000257 FBtr0074728 car protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4330 chr3L 17983163 17983301 + 83 NA intron (FBgn0000568, intron 4 of 7) protein_coding-intron (FBgn0000568, intron 2 of 5) 12946 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3626 chr3L 5915346 5915460 + 83 NA promoter-TSS (FBgn0035649) protein_coding-promoter-TSS (FBgn0035649) -173 FBgn0052407 FBgn0052407 FBtr0330118 CG32407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2376 chr2R 8038543 8038607 + 83 NA promoter-TSS (FBgn0027504) protein_coding-promoter-TSS (FBgn0027504) -464 FBgn0027504 FBgn0027504 FBtr0333063 CG8878 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1281 chr2L 17473211 17473276 + 82 NA promoter-TSS (FBgn0032640) protein_coding-promoter-TSS (FBgn0032640) -28 FBgn0000183 FBgn0000183 FBtr0305688 BicD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_436 chr2L 6684340 6684397 + 82 NA promoter-TSS (FBgn0028703) protein_coding-promoter-TSS (FBgn0028703) -11 FBgn0028703 FBgn0028703 FBtr0333347 Nhe3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2800 chr2R 15192617 15192685 + 82 NA promoter-TSS (FBgn0034432) protein_coding-promoter-TSS (FBgn0034432) -17 FBgn0034432 FBgn0034432 FBtr0300283 CG7461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3134 chr2RHet 13 248 + 82 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7181 chrX 13208953 13209023 + 82 NA Intergenic Intergenic -6352 FBgn0085388 FBgn0085388 FBtr0112575 IP3K2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2330 chr2R 7489005 7489064 + 82 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 3407 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2655 chr2R 12473300 12473394 + 81 NA promoter-TSS (FBgn0003274) protein_coding-promoter-TSS (FBgn0003274) -252 FBgn0003274 FBgn0003274 FBtr0087105 RpLP2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6488 chr3R 27246477 27246546 + 81 NA intron (FBgn0261988, intron 2 of 12) protein_coding-intron (FBgn0261988, intron 2 of 12) 15540 FBgn0261988 FBgn0261988 FBtr0085788 Gprk2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4035 chr3L 13443789 13443856 + 81 NA promoter-TSS (FBgn0036366) protein_coding-promoter-TSS (FBgn0036366) -48 FBgn0036368 FBgn0036368 FBtr0304792 CG10738 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7003 chrX 1666759 1666908 + 81 NA promoter-TSS (FBgn0026086) protein_coding-promoter-TSS (FBgn0026086) -919 FBgn0026086 FBgn0026086 FBtr0309961 Adar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3068 chr2R 19852249 19852323 + 81 NA promoter-TSS (FBgn0020764) protein_coding-promoter-TSS (FBgn0020764) -4 FBgn0020764 FBgn0020764 FBtr0072151 Alas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3493 chr3L 1865397 1865471 + 80 NA promoter-TSS (FBgn0035285) protein_coding-promoter-TSS (FBgn0035285) 4 FBgn0035285 FBgn0035285 FBtr0072834 CG12025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4310 chr3L 17607297 17607378 + 80 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 5088 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_864 chr2L 13398939 13399005 + 80 NA promoter-TSS (FBgn0032521) protein_coding-promoter-TSS (FBgn0032521) -17 FBgn0032521 FBgn0032521 FBtr0080500 CG7110 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5266 chr3R 11153971 11154067 + 80 NA promoter-TSS (FBgn0000533) protein_coding-promoter-TSS (FBgn0000533) -19 FBgn0038318 FBgn0038318 FBtr0083122 CG6236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7054 chrX 5216756 5216833 + 80 NA promoter-TSS (FBgn0014024) protein_coding-promoter-TSS (FBgn0014024) -51 FBgn0014024 FBgn0014024 FBtr0301880 Rnp4F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6325 chr3R 25444683 25444758 + 80 NA promoter-TSS (FBgn0039674) protein_coding-promoter-TSS (FBgn0039674) -36 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5434 chr3R 12846821 12846899 + 80 NA promoter-TSS (FBgn0038467) protein_coding-promoter-TSS (FBgn0038467) -50 FBgn0038467 FBgn0038467 FBtr0083373 CG3590 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5464 chr3R 13361318 13361391 + 80 NA promoter-TSS (FBgn0038516) protein_coding-promoter-TSS (FBgn0038516) 699 FBgn0038516 FBgn0038516 FBtr0083454 CG5840 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7248 chrX 18409375 18409444 + 80 NA promoter-TSS (FBgn0027087) protein_coding-promoter-TSS (FBgn0027087) -52 FBgn0027087 FBgn0027087 FBtr0333806 Aats-his protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3416 chr3L 612297 612602 + 80 NA Intergenic Intergenic 4197 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4604 chr3R 629135 629312 + 80 NA intron (FBgn0260794, intron 1 of 10) protein_coding-intron (FBgn0260794, intron 1 of 11) 8560 FBgn0260794 FBgn0260794 FBtr0303915 ctrip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2160 chr2R 4781068 4781130 + 80 NA promoter-TSS (FBgn0033339) protein_coding-promoter-TSS (FBgn0033339) -30 FBgn0033339 FBgn0033339 FBtr0088643 sec31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5264 chr3R 11094331 11094390 + 80 NA promoter-TSS (FBgn0038311) protein_coding-promoter-TSS (FBgn0038311) -45 FBgn0038312 FBgn0038312 FBtr0290018 CG4334 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7075 chrX 6161227 6161305 + 79 NA promoter-TSS (FBgn0028982) protein_coding-promoter-TSS (FBgn0028982) -6 FBgn0040918 FBgn0040918 FBtr0070937 schlank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3547 chr3L 3239572 3239683 + 79 NA promoter-TSS (FBgn0035425) protein_coding-promoter-TSS (FBgn0035425) -305 FBgn0035425 FBgn0035425 FBtr0073093 CG17746 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3553 chr3L 3325931 3325996 + 79 NA promoter-TSS (FBgn0035438) protein_coding-promoter-TSS (FBgn0035438) -17 FBgn0035437 FBgn0035437 FBtr0073084 CG11526 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4159 chr3L 15581285 15581389 + 79 NA promoter-TSS (FBgn0036518) protein_coding-promoter-TSS (FBgn0036518) -370 FBgn0036516 FBgn0036516 FBtr0301186 CG7656 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_523 chr2L 8553781 8553859 + 79 NA intron (FBgn0011259, intron 2 of 20) protein_coding-intron (FBgn0011259, intron 2 of 21) 10490 FBgn0011259 FBgn0011259 FBtr0329930 Sema-1a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5230 chr3R 10199462 10199532 + 79 NA promoter-TSS (FBgn0024321) protein_coding-promoter-TSS (FBgn0024321) -2029 FBgn0086058 FBgn0086058 FBtr0114334 snoRNA:Me18S-G1189 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2109 chr2R 4061509 4061597 + 79 NA promoter-TSS (FBgn0033274) protein_coding-promoter-TSS (FBgn0033274) -117 FBgn0053087 FBgn0053087 FBtr0331381 LRP1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4679 chr3R 1834319 1834395 + 79 NA promoter-TSS (FBgn0003261) protein_coding-promoter-TSS (FBgn0003261) -56 FBgn0003261 FBgn0003261 FBtr0078654 Rm62 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5109 chr3R 8257010 8257076 + 79 NA promoter-TSS (FBgn0086134) protein_coding-promoter-TSS (FBgn0086134) -4 FBgn0086134 FBgn0086134 FBtr0082590 Pros25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2864 chr2R 16161998 16162141 + 79 NA promoter-TSS (FBgn0034495) protein_coding-promoter-TSS (FBgn0034495) -39 FBgn0034494 FBgn0034494 FBtr0086305 CG10444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1143 chr2L 16075104 16075175 + 78 NA exon (FBgn0013433, exon 3 of 8) protein_coding-exon (FBgn0013433, exon 3 of 8) -19870 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4925 chr3R 5154690 5154760 + 78 NA promoter-TSS (FBgn0037676) protein_coding-promoter-TSS (FBgn0037676) -498 FBgn0037676 FBgn0037676 FBtr0301210 CG8861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2459 chr2R 9320154 9320261 + 78 NA promoter-TSS (FBgn0050065) protein_coding-promoter-TSS (FBgn0050065) 34 FBgn0011910 FBgn0011910 FBtr0089302 tRNA:L3:49Fb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4422 chr3L 20802334 20802402 + 78 NA promoter-TSS (FBgn0037027) protein_coding-promoter-TSS (FBgn0037027) -21 FBgn0037026 FBgn0037026 FBtr0331529 CG3634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6841 chrU 5631269 5631376 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4076 chr3L 14104684 14104790 + 78 NA TTS (FBgn0042630) protein_coding-TTS (FBgn0042630) -3519 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4103 chr3L 14451485 14451557 + 78 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) 47795 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3674 chr3L 6735361 6735427 + 78 NA intron (FBgn0261934, intron 1 of 9) protein_coding-intron (FBgn0261934, intron 1 of 4) 870 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6559 chr3RHet 790942 791063 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1724 chr2L 22024430 22024550 + 78 NA TTS (FBgn0028979) protein_coding-TTS (FBgn0028979) 4455 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6863 chrUextra 188185 188253 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3937 chr3L 11826673 11826755 + 78 NA promoter-TSS (FBgn0000404) protein_coding-promoter-TSS (FBgn0000404) -36 FBgn0000404 FBgn0000404 FBtr0076076 CycA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2204 chr2R 5429361 5429456 + 78 NA TTS (FBgn0259246) protein_coding-TTS (FBgn0259246) 6232 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3529 chr3L 2851999 2852064 + 78 NA intron (FBgn0263392, intron 3 of 9) protein_coding-intron (FBgn0263392, intron 3 of 9) 27127 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4727 chr3R 2527792 2527856 + 78 NA exon (FBgn0004782, exon 2 of 2) protein_coding-exon (FBgn0004782, exon 2 of 2) 775 FBgn0004782 FBgn0004782 FBtr0081692 Ccp84Ab protein_coding Nup98-S2-pascual-garcia2017_R1_peak_394 chr2L 5810479 5810537 + 78 NA Intergenic Intergenic -1066 FBgn0262999 FBgn0262999 FBtr0306842 CG43307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4411 chr3L 20303073 20303139 + 78 NA promoter-TSS (FBgn0003124) protein_coding-promoter-TSS (FBgn0003124) -41 FBgn0003124 FBgn0003124 FBtr0100318 polo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6090 chr3R 23251909 23251991 + 78 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 11254 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2038 chr2R 2810755 2810821 + 78 NA promoter-TSS (FBgn0033117) protein_coding-promoter-TSS (FBgn0033117) -163 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4771 chr3R 2932881 2932952 + 78 NA exon (FBgn0261238, exon 1 of 6) protein_coding-exon (FBgn0261238, exon 1 of 6) 1223 FBgn0261238 FBgn0261238 FBtr0081614 Alh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3151 chr2RHet 133725 133802 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3648 chr3L 6118021 6118083 + 78 NA intron (FBgn0002440, intron 4 of 5) protein_coding-intron (FBgn0002440, intron 4 of 5) 3855 FBgn0002440 FBgn0002440 FBtr0077062 l(3)mbn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5405 chr3R 12624536 12624662 + 78 NA Intergenic Intergenic 10566 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6834 chrU 4475214 4475278 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_333 chr2L 4811752 4811918 + 78 NA Intergenic Intergenic -1174 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5237 chr3R 10349398 10349487 + 78 NA TTS (FBgn0038236) protein_coding-TTS (FBgn0038236) 2671 FBgn0038236 FBgn0038236 FBtr0082954 Cyp313a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2849 chr2R 15993969 15994263 + 78 NA Intergenic Intergenic -4900 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4912 chr3R 5124956 5125021 + 78 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -22504 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6552 chr3RHet 730453 730507 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5115 chr3R 8422606 8422694 + 78 NA Intergenic Intergenic 30786 FBgn0005671 FBgn0005671 FBtr0301661 Vha55 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5582 chr3R 14754370 14754446 + 78 NA promoter-TSS (FBgn0038662) protein_coding-promoter-TSS (FBgn0038662) -12 FBgn0038662 FBgn0038662 FBtr0083723 CG14290 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5447 chr3R 13197119 13197254 + 78 NA Intergenic Intergenic -5347 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6408 chr3R 26358177 26358243 + 78 NA promoter-TSS (FBgn0082582) protein_coding-promoter-TSS (FBgn0082582) -5449 FBgn0027654 FBgn0027654 FBtr0085683 jdp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3319 chr2RHet 1990914 1991018 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4750 chr3R 2718991 2719095 + 78 NA Intergenic Intergenic 11361 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_496 chr2L 8031003 8031073 + 78 NA promoter-TSS (FBgn0044323) protein_coding-promoter-TSS (FBgn0044323) 317 FBgn0044323 FBgn0044323 FBtr0079539 Cka protein_coding Nup98-S2-pascual-garcia2017_R1_peak_123 chr2L 1511066 1511262 + 78 NA Intergenic Intergenic 6314 FBgn0031345 FBgn0031345 FBtr0077919 CG18132 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5164 chr3R 9097709 9097777 + 78 NA promoter-TSS (FBgn0038129) protein_coding-promoter-TSS (FBgn0038129) 5 FBgn0038129 FBgn0038129 FBtr0082778 CG8449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1400 chr2L 18881569 18881653 + 78 NA promoter-TSS (FBgn0003896) protein_coding-promoter-TSS (FBgn0003896) -355 FBgn0003896 FBgn0003896 FBtr0081111 tup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1873 chr2L 22891166 22891253 + 78 NA Intergenic Intergenic 16675 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7057 chrX 5418473 5418634 + 78 NA promoter-TSS (FBgn0086667) snoRNA-promoter-TSS (FBgn0086667) -55 FBgn0086667 FBgn0086667 FBtr0091788 snoRNA:Psi28S-3342 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_978 chr2L 14599435 14599528 + 78 NA promoter-TSS (FBgn0028910) tRNA-promoter-TSS (FBgn0028910) -14 FBgn0028911 FBgn0028911 FBtr0080660 tRNA:P:35Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_3073 chr2R 20031992 20032075 + 78 NA intron (FBgn0019643, intron 1 of 3) protein_coding-intron (FBgn0019643, intron 1 of 3) -2474 FBgn0019643 FBgn0019643 FBtr0072255 Dat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6030 chr3R 22517931 22518020 + 78 NA TTS (FBgn0039448) protein_coding-TTS (FBgn0039448) 1270 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_351 chr2L 5241430 5241485 + 78 NA promoter-TSS (FBgn0051914) tRNA-promoter-TSS (FBgn0051914) -280 FBgn0051914 FBgn0051914 FBtr0079090 tRNA:CR31914 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5473 chr3R 13445660 13445722 + 78 NA promoter-TSS (FBgn0011945) tRNA-promoter-TSS (FBgn0011945) 8 FBgn0011945 FBgn0011945 FBtr0083469 tRNA:P:90Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4261 chr3L 17147725 17147823 + 78 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -12189 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1852 chr2L 22702347 22702466 + 78 NA Intergenic Intergenic -11398 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2307 chr2R 7292147 7292229 + 78 NA Intergenic Intergenic -1028 FBgn0033633 FBgn0033633 FBtr0088134 CG7759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2201 chr2R 5415998 5416079 + 78 NA exon (FBgn0259246, exon 11 of 22) protein_coding-exon (FBgn0259246, exon 11 of 22) 19602 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6837 chrU 5300564 5300618 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2222 chr2R 5707745 5707823 + 78 NA promoter-TSS (FBgn0033446) protein_coding-promoter-TSS (FBgn0033446) -284 FBgn0054033 FBgn0054033 FBtr0100088 CG34033 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2094 chr2R 3912062 3912256 + 78 NA Intergenic Intergenic 5274 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6339 chr3R 25517000 25517088 + 78 NA Intergenic Intergenic -1269 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_69 chr2L 1049469 1049612 + 78 NA TTS (FBgn0003310) protein_coding-TTS (FBgn0003310) 12294 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1931 chr2R 363826 363892 + 78 NA Intergenic Intergenic -5301 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4837 chr3R 3966724 3966786 + 78 NA promoter-TSS (FBgn0011959) tRNA-promoter-TSS (FBgn0011959) 9 FBgn0011959 FBgn0011959 FBtr0081809 tRNA:R2:84Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_2020 chr2R 2389409 2389552 + 78 NA promoter-TSS (FBgn0086655) protein_coding-promoter-TSS (FBgn0086655) 31620 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1208 chr2L 16873730 16873829 + 78 NA intron (FBgn0051781, intron 1 of 1) ncRNA-intron (FBgn0051781, intron 1 of 1) 4292 FBgn0051781 FBgn0051781 FBtr0308928 CR31781 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4683 chr3R 1887283 1887430 + 78 NA Intergenic Intergenic -4097 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3970 chr3L 12427676 12427892 + 78 NA Intergenic Intergenic -2016 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4283 chr3L 17332986 17333101 + 78 NA promoter-TSS (FBgn0052173) tRNA-promoter-TSS (FBgn0052173) 37 FBgn0052173 FBgn0052173 FBtr0075244 tRNA:CR32173 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1822 chr2L 22581699 22581781 + 78 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 62787 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2429 chr2R 8965739 8965809 + 78 NA intron (FBgn0033791, intron 1 of 10) protein_coding-intron (FBgn0033791, intron 1 of 10) 1269 FBgn0033791 FBgn0033791 FBtr0087794 Drl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3398 chr3L 199228 199380 + 77 NA promoter-TSS (FBgn0035107) protein_coding-promoter-TSS (FBgn0035107) 458 FBgn0035106 FBgn0035106 FBtr0305548 rno protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2914 chr2R 17169741 17169820 + 77 NA promoter-TSS (FBgn0034611) protein_coding-promoter-TSS (FBgn0034611) -125 FBgn0034611 FBgn0034611 FBtr0071591 MFS16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7053 chrX 5206201 5206264 + 77 NA promoter-TSS (FBgn0011761) protein_coding-promoter-TSS (FBgn0011761) -174 FBgn0011761 FBgn0011761 FBtr0070749 dhd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5245 chr3R 10563739 10563838 + 77 NA intron (FBgn0011217, intron 1 of 4) protein_coding-intron (FBgn0011217, intron 2 of 5) 2698 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5055 chr3R 7257576 7257637 + 77 NA promoter-TSS (FBgn0037899) protein_coding-promoter-TSS (FBgn0037899) 146 FBgn0037900 FBgn0037900 FBtr0082390 CG5276 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5659 chr3R 15703428 15703491 + 77 NA promoter-TSS (FBgn0038742) protein_coding-promoter-TSS (FBgn0038742) -11 FBgn0038742 FBgn0038742 FBtr0083817 Arc42 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4183 chr3L 16012973 16013045 + 77 NA TTS (FBgn0264600) protein_coding-TTS (FBgn0264600) -1592 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2085 chr2R 3804417 3804478 + 77 NA promoter-TSS (FBgn0015509) protein_coding-promoter-TSS (FBgn0015509) -236 FBgn0015509 FBgn0015509 FBtr0088847 lin19 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3836 chr3L 9848357 9848444 + 77 NA promoter-TSS (FBgn0004390) protein_coding-promoter-TSS (FBgn0004390) -15 FBgn0004390 FBgn0004390 FBtr0330168 Gap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3467 chr3L 1366927 1366997 + 76 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -3666 FBgn0003295 FBgn0003295 FBtr0072681 ru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7268 chrX 20936354 20936416 + 76 NA promoter-TSS (FBgn0052512) protein_coding-promoter-TSS (FBgn0052512) -770 FBgn0052512 FBgn0052512 FBtr0332847 CG32512 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2602 chr2R 11761803 11761872 + 76 NA exon (FBgn0264089, exon 18 of 20) protein_coding-exon (FBgn0264089, exon 18 of 20) -5187 FBgn0050085 FBgn0050085 FBtr0087306 CG30085 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7205 chrX 15513583 15513659 + 76 NA intron (FBgn0003463, intron 3 of 7) protein_coding-intron (FBgn0003463, intron 1 of 5) 13846 FBgn0003463 FBgn0003463 FBtr0331761 sog protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2627 chr2R 12152142 12152205 + 76 NA promoter-TSS (FBgn0025519) protein_coding-promoter-TSS (FBgn0025519) -7 FBgn0015925 FBgn0015925 FBtr0089872 csul protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1279 chr2L 17429903 17430039 + 76 NA intron (FBgn0011274, intron 1 of 7) protein_coding-intron (FBgn0011274, intron 1 of 7) 3190 FBgn0011274 FBgn0011274 FBtr0301577 Dif protein_coding Nup98-S2-pascual-garcia2017_R1_peak_199 chr2L 2856056 2856110 + 76 NA promoter-TSS (FBgn0015521) protein_coding-promoter-TSS (FBgn0015521) 13 FBgn0015521 FBgn0015521 FBtr0273293 RpS21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7259 chrX 19532408 19532513 + 76 NA promoter-TSS (FBgn0031047) protein_coding-promoter-TSS (FBgn0031047) -75 FBgn0087008 FBgn0087008 FBtr0074762 e(y)3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2879 chr2R 16476030 16476106 + 76 NA intron (FBgn0015907, intron 1 of 8) protein_coding-intron (FBgn0015907, intron 1 of 8) 1058 FBgn0015907 FBgn0015907 FBtr0086222 bl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1351 chr2L 18138034 18138094 + 75 NA TTS (FBgn0041184) protein_coding-TTS (FBgn0041184) 146 FBgn0001301 FBgn0001301 FBtr0081043 kel protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6513 chr3R 27551369 27551474 + 75 NA promoter-TSS (FBgn0003870) protein_coding-promoter-TSS (FBgn0003870) -703 FBgn0003870 FBgn0003870 FBtr0303228 ttk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7201 chrX 14841502 14841638 + 75 NA intron (FBgn0027601, intron 3 of 6) protein_coding-intron (FBgn0027601, intron 1 of 4) 4257 FBgn0027601 FBgn0027601 FBtr0073972 pdgy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4372 chr3L 18764592 18764677 + 75 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -5790 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7122 chrX 9478767 9478828 + 75 NA Intergenic Intergenic -1126 FBgn0001186 FBgn0001186 FBtr0071362 Hex-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_178 chr2L 2492845 2492915 + 75 NA promoter-TSS (FBgn0011818) protein_coding-promoter-TSS (FBgn0011818) -75 FBgn0011818 FBgn0011818 FBtr0077779 oaf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7169 chrX 12791361 12791472 + 75 NA promoter-TSS (FBgn0259171) protein_coding-promoter-TSS (FBgn0259171) -552 FBgn0259171 FBgn0259171 FBtr0333524 Pde9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3473 chr3L 1463617 1463688 + 75 NA promoter-TSS (FBgn0004635) protein_coding-promoter-TSS (FBgn0004635) -159 FBgn0004635 FBgn0004635 FBtr0072694 rho protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3750 chr3L 7857280 7857363 + 75 NA intron (FBgn0016694, intron 1 of 5) protein_coding-intron (FBgn0016694, intron 1 of 4) 3148 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2062 chr2R 3306671 3306782 + 75 NA exon (FBgn0003460, exon 1 of 7) protein_coding-exon (FBgn0003460, exon 1 of 7) 189 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6855 chrU 7544816 7544879 + 75 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2749 chr2R 14261936 14262018 + 74 NA Intergenic Intergenic -3015 FBgn0261700 FBgn0261700 FBtr0303193 CG42736 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3055 chr2R 19601260 19601338 + 74 NA promoter-TSS (FBgn0034897) protein_coding-promoter-TSS (FBgn0034897) -126 FBgn0034897 FBgn0034897 FBtr0113114 Sesn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4295 chr3L 17570646 17570735 + 74 NA promoter-TSS (FBgn0000567) protein_coding-promoter-TSS (FBgn0000567) -11428 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2960 chr2R 18015006 18015068 + 74 NA promoter-TSS (FBgn0029147) protein_coding-promoter-TSS (FBgn0029147) -35 FBgn0034697 FBgn0034697 FBtr0071790 GM130 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4270 chr3L 17222796 17222868 + 74 NA intron (FBgn0260943, intron 2 of 14) protein_coding-intron (FBgn0260943, intron 2 of 14) 8480 FBgn0260943 FBgn0260943 FBtr0113427 Rbp6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5834 chr3R 18320622 18320697 + 74 NA Intergenic Intergenic 1928 FBgn0038979 FBgn0038979 FBtr0084259 CG7046 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4325 chr3L 17906429 17906485 + 74 NA promoter-TSS (FBgn0036772) protein_coding-promoter-TSS (FBgn0036772) -792 FBgn0036772 FBgn0036772 FBtr0075152 CG5290 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5688 chr3R 15970672 15970767 + 74 NA Intergenic Intergenic -5076 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7082 chrX 6992073 6992267 + 74 NA promoter-TSS (FBgn0264270) protein_coding-promoter-TSS (FBgn0264270) -101 FBgn0264270 FBgn0264270 FBtr0331261 Sxl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4012 chr3L 13034804 13034889 + 74 NA promoter-TSS (FBgn0011284) protein_coding-promoter-TSS (FBgn0011284) -55 FBgn0011284 FBgn0011284 FBtr0075885 RpS4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4696 chr3R 2072861 2072950 + 74 NA Intergenic Intergenic -1809 FBgn0037414 FBgn0037414 FBtr0078597 Osi7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2168 chr2R 4888917 4888987 + 74 NA exon (FBgn0085379, exon 2 of 9) protein_coding-exon (FBgn0085379, exon 2 of 9) 5140 FBgn0085379 FBgn0085379 FBtr0112560 CG34350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5598 chr3R 14920669 14920741 + 74 NA promoter-TSS (FBgn0004876) protein_coding-promoter-TSS (FBgn0004876) -9 FBgn0016120 FBgn0016120 FBtr0083728 ATPsyn-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3884 chr3L 10707285 10707361 + 74 NA Intergenic Intergenic -17346 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6974 chrUextra 28735960 28736045 + 74 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4460 chr3L 22828592 22828657 + 73 NA promoter-TSS (FBgn0027339) protein_coding-promoter-TSS (FBgn0027339) -1544 FBgn0037195 FBgn0037195 FBtr0078546 CG11226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2921 chr2R 17271832 17271905 + 73 NA promoter-TSS (FBgn0034626) protein_coding-promoter-TSS (FBgn0034626) -22 FBgn0034626 FBgn0034626 FBtr0071609 CG10795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5910 chr3R 20702324 20702405 + 73 NA promoter-TSS (FBgn0039241) protein_coding-promoter-TSS (FBgn0039241) 2 FBgn0039240 FBgn0039240 FBtr0084726 CG3744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5699 chr3R 16135128 16135193 + 73 NA promoter-TSS (FBgn0261550) protein_coding-promoter-TSS (FBgn0261550) -1902 FBgn0038784 FBgn0038784 FBtr0083900 CG4362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6142 chr3R 23742205 23742266 + 73 NA promoter-TSS (FBgn0039555) protein_coding-promoter-TSS (FBgn0039555) 14 FBgn0039554 FBgn0039554 FBtr0085272 CG5003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1387 chr2L 18708571 18708626 + 73 NA promoter-TSS (FBgn0032705) protein_coding-promoter-TSS (FBgn0032705) 90 FBgn0025608 FBgn0025608 FBtr0081126 Faf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3968 chr3L 12407956 12408027 + 73 NA promoter-TSS (FBgn0052103) protein_coding-promoter-TSS (FBgn0052103) -49 FBgn0052103 FBgn0052103 FBtr0332089 CG32103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_345 chr2L 5070929 5070992 + 73 NA promoter-TSS (FBgn0261608) protein_coding-promoter-TSS (FBgn0261608) 3 FBgn0261608 FBgn0261608 FBtr0079017 RpL37A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2572 chr2R 11237076 11237151 + 73 NA promoter-TSS (FBgn0034013) protein_coding-promoter-TSS (FBgn0034013) -546 FBgn0034013 FBgn0034013 FBtr0087382 unc-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5334 chr3R 11925569 11925658 + 73 NA intron (FBgn0010379, intron 1 of 6) protein_coding-intron (FBgn0010379, intron 1 of 6) 675 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5837 chr3R 18373537 18373632 + 73 NA promoter-TSS (FBgn0038984) protein_coding-promoter-TSS (FBgn0038984) -17 FBgn0038984 FBgn0038984 FBtr0084284 CG5315 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6636 chr4 887640 887727 + 73 NA promoter-TSS (FBgn0039936) protein_coding-promoter-TSS (FBgn0039936) -31 FBgn0039936 FBgn0039936 FBtr0300886 CG11148 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5969 chr3R 22014504 22014624 + 73 NA promoter-TSS (FBgn0039417) protein_coding-promoter-TSS (FBgn0039417) -38 FBgn0039417 FBgn0039417 FBtr0307342 CG6073 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1568 chr2L 20656152 20656213 + 72 NA promoter-TSS (FBgn0032873) protein_coding-promoter-TSS (FBgn0032873) -6 FBgn0261787 FBgn0261787 FBtr0081403 bru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3071 chr2R 19925415 19925495 + 72 NA promoter-TSS (FBgn0034964) protein_coding-promoter-TSS (FBgn0034964) -52 FBgn0034964 FBgn0034964 FBtr0072168 IntS1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4886 chr3R 4495179 4495297 + 72 NA promoter-TSS (FBgn0037607) protein_coding-promoter-TSS (FBgn0037607) -342 FBgn0012024 FBgn0012024 FBtr0081884 tRNA:Y1:85Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_4449 chr3L 21872510 21872662 + 72 NA promoter-TSS (FBgn0262737) protein_coding-promoter-TSS (FBgn0262737) 7553 FBgn0264470 FBgn0264470 FBtr0332737 CR43878 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2700 chr2R 13480690 13480744 + 72 NA promoter-TSS (FBgn0050105) protein_coding-promoter-TSS (FBgn0050105) 421 FBgn0029006 FBgn0029006 FBtr0086833 lack protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4883 chr3R 4493897 4493959 + 72 NA promoter-TSS (FBgn0012026) tRNA-promoter-TSS (FBgn0012026) 2 FBgn0012026 FBgn0012026 FBtr0081886 tRNA:Y1:85Ac tRNA Nup98-S2-pascual-garcia2017_R1_peak_4321 chr3L 17839555 17839684 + 72 NA promoter-TSS (FBgn0036762) protein_coding-promoter-TSS (FBgn0036762) -18 FBgn0036761 FBgn0036761 FBtr0075160 MED19 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5067 chr3R 7575791 7575877 + 72 NA promoter-TSS (FBgn0037944) protein_coding-promoter-TSS (FBgn0037944) -221 FBgn0262364 FBgn0262364 FBtr0304646 CG43062 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4066 chr3L 13950720 13950788 + 72 NA intron (FBgn0052137, intron 2 of 6) protein_coding-intron (FBgn0052137, intron 2 of 6) 7048 FBgn0025874 FBgn0025874 FBtr0333030 Meics protein_coding Nup98-S2-pascual-garcia2017_R1_peak_498 chr2L 8071620 8071674 + 72 NA promoter-TSS (FBgn0011230) protein_coding-promoter-TSS (FBgn0011230) -23 FBgn0011230 FBgn0011230 FBtr0333088 poe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5061 chr3R 7476401 7476474 + 72 NA promoter-TSS (FBgn0037926) protein_coding-promoter-TSS (FBgn0037926) -273 FBgn0037926 FBgn0037926 FBtr0082420 Elp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1200 chr2L 16738363 16738450 + 71 NA promoter-TSS (FBgn0032598) protein_coding-promoter-TSS (FBgn0032598) -34 FBgn0015391 FBgn0015391 FBtr0080935 glu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1397 chr2L 18859289 18859362 + 71 NA promoter-TSS (FBgn0032720) protein_coding-promoter-TSS (FBgn0032720) -79 FBgn0032720 FBgn0032720 FBtr0089318 mRpL13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2213 chr2R 5580809 5580875 + 71 NA promoter-TSS (FBgn0023143) protein_coding-promoter-TSS (FBgn0023143) -9 FBgn0023143 FBgn0023143 FBtr0310357 Uba1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6556 chr3RHet 789430 789489 + 71 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2925 chr2R 17384959 17385016 + 71 NA promoter-TSS (FBgn0010470) protein_coding-promoter-TSS (FBgn0010470) -274 FBgn0010470 FBgn0010470 FBtr0306013 Fkbp13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7226 chrX 17053937 17054035 + 70 NA promoter-TSS (FBgn0000163) protein_coding-promoter-TSS (FBgn0000163) -647 FBgn0028974 FBgn0028974 FBtr0074404 xmas-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2497 chr2R 9895951 9896018 + 70 NA promoter-TSS (FBgn0002643) protein_coding-promoter-TSS (FBgn0002643) -2498 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6512 chr3R 27550768 27550829 + 70 NA promoter-TSS (FBgn0003870) protein_coding-promoter-TSS (FBgn0003870) -1326 FBgn0003870 FBgn0003870 FBtr0303228 ttk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4071 chr3L 13997276 13997349 + 70 NA intron (FBgn0036398, intron 2 of 7) protein_coding-intron (FBgn0036398, intron 2 of 7) 2085 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6947 chrUextra 22459742 22459796 + 70 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6892 chrUextra 956701 956767 + 70 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5060 chr3R 7474718 7474783 + 70 NA intron (FBgn0262081, intron 1 of 8) protein_coding-intron (FBgn0262081, intron 1 of 8) -1960 FBgn0037926 FBgn0037926 FBtr0082420 Elp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4893 chr3R 4640152 4640210 + 70 NA promoter-TSS (FBgn0037635) protein_coding-promoter-TSS (FBgn0037635) -4648 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_855 chr2L 13182555 13182630 + 70 NA promoter-TSS (FBgn0032478) protein_coding-promoter-TSS (FBgn0032478) 4 FBgn0051849 FBgn0051849 FBtr0080490 CG31849 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5657 chr3R 15687063 15687125 + 69 NA promoter-TSS (FBgn0038737) protein_coding-promoter-TSS (FBgn0038737) -81 FBgn0261984 FBgn0261984 FBtr0113248 Ire1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4931 chr3R 5551298 5551390 + 69 NA promoter-TSS (FBgn0002431) protein_coding-promoter-TSS (FBgn0002431) -11 FBgn0002431 FBgn0002431 FBtr0082090 hyd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4308 chr3L 17605067 17605145 + 69 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 7319 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1483 chr2L 19873478 19873539 + 69 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 17407 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3110 chr2R 20631214 20631336 + 69 NA promoter-TSS (FBgn0050421) protein_coding-promoter-TSS (FBgn0050421) -60 FBgn0050421 FBgn0050421 FBtr0072369 CG30421 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2492 chr2R 9821959 9822075 + 69 NA intron (FBgn0013733, intron 1 of 31) protein_coding-intron (FBgn0013733, intron 1 of 30) 8865 FBgn0033885 FBgn0033885 FBtr0087615 DJ-1alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1182 chr2L 16485626 16485902 + 69 NA promoter-TSS (FBgn0005677) protein_coding-promoter-TSS (FBgn0005677) 220 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1763 chr2L 22200867 22200931 + 69 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 13366 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7081 chrX 6892745 6892813 + 69 NA promoter-TSS (FBgn0027108) protein_coding-promoter-TSS (FBgn0027108) 74 FBgn0027108 FBgn0027108 FBtr0301860 inx2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7018 chrX 2518799 2518872 + 69 NA promoter-TSS (FBgn0040333) protein_coding-promoter-TSS (FBgn0040333) -2 FBgn0261922 FBgn0261922 FBtr0307158 PI4KIIIalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4674 chr3R 1688160 1688224 + 69 NA promoter-TSS (FBgn0037391) protein_coding-promoter-TSS (FBgn0037391) -1173 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6975 chrUextra 28878836 28878920 + 69 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6436 chr3R 26755256 26755372 + 69 NA exon (FBgn0020912, exon 5 of 5) protein_coding-exon (FBgn0020912, exon 5 of 5) 6915 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5236 chr3R 10337195 10337253 + 68 NA promoter-TSS (FBgn0038234) protein_coding-promoter-TSS (FBgn0038234) 210 FBgn0038233 FBgn0038233 FBtr0082987 HtrA2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2068 chr2R 3334941 3335020 + 68 NA promoter-TSS (FBgn0033174) protein_coding-promoter-TSS (FBgn0033174) -4 FBgn0033174 FBgn0033174 FBtr0088974 CG11125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5632 chr3R 15424785 15424865 + 68 NA promoter-TSS (FBgn0038714) protein_coding-promoter-TSS (FBgn0038714) -154 FBgn0038714 FBgn0038714 FBtr0083811 Cpr92A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5057 chr3R 7383185 7383250 + 68 NA promoter-TSS (FBgn0037911) protein_coding-promoter-TSS (FBgn0037911) -234 FBgn0037911 FBgn0037911 FBtr0082410 CG10898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4249 chr3L 16948443 16948498 + 68 NA promoter-TSS (FBgn0010352) protein_coding-promoter-TSS (FBgn0010352) 435 FBgn0010352 FBgn0010352 FBtr0075269 Nc73EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4226 chr3L 16584176 16584239 + 68 NA promoter-TSS (FBgn0003741) protein_coding-promoter-TSS (FBgn0003741) -57 FBgn0003741 FBgn0003741 FBtr0100244 tra protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5243 chr3R 10485103 10485163 + 68 NA promoter-TSS (FBgn0038251) protein_coding-promoter-TSS (FBgn0038251) -30 FBgn0038251 FBgn0038251 FBtr0082968 CG3508 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6775 chrU 1586723 1586803 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4918 chr3R 5142575 5142639 + 67 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -4885 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_624 chr2L 9195529 9195609 + 67 NA intron (FBgn0041092, intron 2 of 12) protein_coding-intron (FBgn0041092, intron 3 of 14) 28791 FBgn0041092 FBgn0041092 FBtr0303872 tai protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7045 chrX 4319167 4319271 + 67 NA intron (FBgn0000179, intron 1 of 7) protein_coding-intron (FBgn0000179, intron 1 of 7) 12330 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_319 chr2L 4629587 4629660 + 67 NA Intergenic Intergenic -11673 FBgn0083938 FBgn0083938 FBtr0110769 BG642163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5782 chr3R 17260043 17260275 + 67 NA promoter-TSS (FBgn0008651) protein_coding-promoter-TSS (FBgn0008651) -304 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3413 chr3L 610920 611024 + 67 NA Intergenic Intergenic -4403 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1738 chr2L 22072147 22072206 + 67 NA exon (FBgn0051702, exon 1 of 2) protein_coding-exon (FBgn0051702, exon 1 of 2) 1023 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6080 chr3R 23153897 23153979 + 67 NA Intergenic Intergenic 2666 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_791 chr2L 12373792 12373870 + 67 NA exon (FBgn0262475, exon 2 of 7) protein_coding-exon (FBgn0262475, exon 2 of 7) 17390 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3944 chr3L 11911436 11911566 + 67 NA Intergenic Intergenic -3112 FBgn0036221 FBgn0036221 FBtr0076038 CG11588 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2007 chr2R 2053467 2053578 + 67 NA promoter-TSS (FBgn0011887) tRNA-promoter-TSS (FBgn0011887) 33 FBgn0011887 FBgn0011887 FBtr0085983 tRNA:K2:42Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_7013 chrX 2211475 2211630 + 67 NA intron (FBgn0003079, intron 2 of 5) protein_coding-intron (FBgn0003079, intron 2 of 5) 4745 FBgn0054052 FBgn0054052 FBtr0308938 CR34052 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3995 chr3L 12686590 12686676 + 67 NA promoter-TSS (FBgn0014343) protein_coding-promoter-TSS (FBgn0014343) -106 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3956 chr3L 12161316 12161379 + 67 NA exon (FBgn0036260, exon 2 of 4) protein_coding-exon (FBgn0036260, exon 2 of 4) -4512 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1939 chr2R 575431 575487 + 67 NA Intergenic Intergenic 16097 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_365 chr2L 5421844 5421956 + 67 NA Intergenic Intergenic -9942 FBgn0263866 FBgn0263866 FBtr0329835 CR43713 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3543 chr3L 3095719 3095832 + 67 NA promoter-TSS (FBgn0052288) tRNA-promoter-TSS (FBgn0052288) 38 FBgn0052288 FBgn0052288 FBtr0073018 tRNA:CR32288 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6583 chr3RHet 2073731 2073889 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1851 chr2L 22702201 22702283 + 67 NA Intergenic Intergenic -11234 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7060 chrX 5488040 5488173 + 67 NA promoter-TSS (FBgn0263511) protein_coding-promoter-TSS (FBgn0263511) -200 FBgn0263511 FBgn0263511 FBtr0070781 Vsx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_934 chr2L 14329011 14329094 + 67 NA TTS (FBgn0261563) protein_coding-TTS (FBgn0261563) 623 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6955 chrUextra 25314387 25314550 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5959 chr3R 21861980 21862043 + 67 NA promoter-TSS (FBgn0002633) protein_coding-promoter-TSS (FBgn0002633) -749 FBgn0002633 FBgn0002633 FBtr0084960 HLHm7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4767 chr3R 2863058 2863135 + 67 NA Intergenic Intergenic -14961 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2009 chr2R 2057094 2057187 + 67 NA promoter-TSS (FBgn0011956) tRNA-promoter-TSS (FBgn0011956) 28 FBgn0011956 FBgn0011956 FBtr0085985 tRNA:R2:42Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_21 chr2L 610713 610778 + 67 NA Intergenic Intergenic -1611 FBgn0263658 FBgn0263658 FBtr0310101 CR43649 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2896 chr2R 16791061 16791296 + 67 NA promoter-TSS (FBgn0015524) protein_coding-promoter-TSS (FBgn0015524) -278 FBgn0015524 FBgn0015524 FBtr0110772 otp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5722 chr3R 16310945 16311025 + 67 NA promoter-TSS (FBgn0262869) protein_coding-promoter-TSS (FBgn0262869) -712 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_421 chr2L 6338785 6338891 + 67 NA promoter-TSS (FBgn0015623) protein_coding-promoter-TSS (FBgn0015623) -167 FBgn0031799 FBgn0031799 FBtr0079284 Pez protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6674 chrM 3646 3707 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6415 chr3R 26540432 26540513 + 67 NA Intergenic Intergenic -8657 FBgn0051010 FBgn0051010 FBtr0085725 CG31010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3540 chr3L 3035434 3035495 + 67 NA promoter-TSS (FBgn0035388) protein_coding-promoter-TSS (FBgn0035388) -529 FBgn0035388 FBgn0035388 FBtr0300175 CG2162 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5704 chr3R 16162827 16162886 + 67 NA Intergenic Intergenic -2133 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_588 chr2L 8845617 8845696 + 67 NA Intergenic Intergenic -17120 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3481 chr3L 1602112 1602237 + 67 NA promoter-TSS (FBgn0035240) protein_coding-promoter-TSS (FBgn0035240) 500 FBgn0035238 FBgn0035238 FBtr0072825 CG12104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_716 chr2L 11210527 11210624 + 67 NA promoter-TSS (FBgn0264442) protein_coding-promoter-TSS (FBgn0264442) -4483 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5685 chr3R 15960276 15960372 + 67 NA Intergenic Intergenic 5319 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2521 chr2R 10404581 10404718 + 67 NA Intergenic Intergenic -1936 FBgn0033942 FBgn0033942 FBtr0087514 Cpr51A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4780 chr3R 3056717 3056774 + 67 NA intron (FBgn0037487, intron 2 of 5) protein_coding-intron (FBgn0037487, intron 2 of 5) 6609 FBgn0037487 FBgn0037487 FBtr0303219 CG14608 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6958 chrUextra 26488724 26488835 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7007 chrX 1847083 1847228 + 67 NA intron (FBgn0264562, intron 2 of 11) protein_coding-intron (FBgn0264562, intron 2 of 11) 11182 FBgn0264562 FBgn0264562 FBtr0333339 Hr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4429 chr3L 21097884 21097962 + 67 NA intron (FBgn0020294, intron 1 of 7) protein_coding-intron (FBgn0020294, intron 1 of 7) -4723 FBgn0020294 FBgn0020294 FBtr0333449 ko protein_coding Nup98-S2-pascual-garcia2017_R1_peak_471 chr2L 7306856 7307043 + 67 NA promoter-TSS (FBgn0004009) protein_coding-promoter-TSS (FBgn0004009) -212 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5404 chr3R 12608289 12608363 + 67 NA Intergenic Intergenic -5707 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5787 chr3R 17285850 17285944 + 67 NA Intergenic Intergenic -5526 FBgn0263407 FBgn0263407 FBtr0309186 CR43453 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3260 chr2RHet 1859512 1859576 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4709 chr3R 2302297 2302378 + 67 NA Intergenic Intergenic 8203 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2825 chr2R 15615456 15615574 + 67 NA promoter-TSS (FBgn0050220) tRNA-promoter-TSS (FBgn0050220) 42 FBgn0011848 FBgn0011848 FBtr0086446 tRNA:E4:56Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_4251 chr3L 17060268 17060383 + 67 NA exon (FBgn0260943, exon 14 of 15) protein_coding-exon (FBgn0260943, exon 14 of 15) 11612 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7113 chrX 8700746 8700805 + 67 NA promoter-TSS (FBgn0026411) protein_coding-promoter-TSS (FBgn0026411) -21389 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7269 chrX 21102331 21102479 + 67 NA promoter-TSS (FBgn0011954) tRNA-promoter-TSS (FBgn0011954) 21 FBgn0052518 FBgn0052518 FBtr0077238 tRNA:CR32518:Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_381 chr2L 5635262 5635330 + 67 NA intron (FBgn0051646, intron 8 of 12) protein_coding-intron (FBgn0051646, intron 8 of 12) -5704 FBgn0262256 FBgn0262256 FBtr0304352 mir-959 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7250 chrX 18544465 18544523 + 67 NA promoter-TSS (FBgn0030944) protein_coding-promoter-TSS (FBgn0030944) -15 FBgn0030944 FBgn0030944 FBtr0074615 CG6617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5418 chr3R 12725206 12725304 + 67 NA intron (FBgn0263610, intron 2 of 7) ncRNA-intron (FBgn0263610, intron 2 of 7) 7123 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6907 chrUextra 5832336 5832396 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5397 chr3R 12574439 12574498 + 67 NA intron (FBgn0020556, intron 1 of 2) ncRNA-intron (FBgn0020556, intron 2 of 2) -2360 FBgn0020556 FBgn0020556 FBtr0083344 bxd ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5575 chr3R 14665003 14665059 + 67 NA intron (FBgn0038653, intron 1 of 3) protein_coding-intron (FBgn0038653, intron 1 of 2) 9915 FBgn0038653 FBgn0038653 FBtr0332809 CG18208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3545 chr3L 3096584 3096638 + 67 NA promoter-TSS (FBgn0052285) tRNA-promoter-TSS (FBgn0052285) 7 FBgn0052285 FBgn0052285 FBtr0073021 tRNA:CR32285 tRNA Nup98-S2-pascual-garcia2017_R1_peak_802 chr2L 12618037 12618299 + 67 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -180 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3044 chr2R 19524043 19524257 + 67 NA intron (FBgn0004795, intron 1 of 11) protein_coding-intron (FBgn0004795, intron 1 of 11) 4015 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_977 chr2L 14598799 14598924 + 67 NA promoter-TSS (FBgn0028912) tRNA-promoter-TSS (FBgn0028912) 2 FBgn0028912 FBgn0028912 FBtr0080646 tRNA:P:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_4333 chr3L 18019183 18019294 + 67 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -14179 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5716 chr3R 16216010 16216070 + 67 NA exon (FBgn0262869, exon 11 of 20) protein_coding-exon (FBgn0262869, exon 11 of 20) 17528 FBgn0038795 FBgn0038795 FBtr0083894 CG4335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2305 chr2R 7281803 7281943 + 67 NA promoter-TSS (FBgn0050257) tRNA-promoter-TSS (FBgn0050257) 15 FBgn0050257 FBgn0050257 FBtr0088131 tRNA:CR30257 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4112 chr3L 14667086 14667143 + 67 NA promoter-TSS (FBgn0011928) tRNA-promoter-TSS (FBgn0011928) -1 FBgn0011927 FBgn0011927 FBtr0075713 tRNA:M3:70Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_6898 chrUextra 3080856 3081171 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5362 chr3R 12229555 12229741 + 67 NA promoter-TSS (FBgn0003513) protein_coding-promoter-TSS (FBgn0003513) -236 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1577 chr2L 20770111 20770173 + 67 NA promoter-TSS (FBgn0000251) protein_coding-promoter-TSS (FBgn0000251) -752 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1206 chr2L 16868835 16868942 + 67 NA promoter-TSS (FBgn0051781) ncRNA-promoter-TSS (FBgn0051781) -599 FBgn0051781 FBgn0051781 FBtr0308928 CR31781 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_286 chr2L 4325398 4325496 + 67 NA intron (FBgn0028482, intron 1 of 5) protein_coding-intron (FBgn0028482, intron 1 of 5) 874 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5903 chr3R 20477063 20477139 + 67 NA promoter-TSS (FBgn0000139) protein_coding-promoter-TSS (FBgn0000139) 199 FBgn0000139 FBgn0000139 FBtr0084659 ash2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3347 chr2RHet 2202789 2202936 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_93 chr2L 1310094 1310217 + 67 NA Intergenic Intergenic -19006 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_887 chr2L 13743273 13743333 + 67 NA Intergenic Intergenic 4380 FBgn0262272 FBgn0262272 FBtr0304386 mir-1002 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4994 chr3R 6478084 6478142 + 67 NA Intergenic Intergenic -4055 FBgn0085333 FBgn0085333 FBtr0112500 CG34304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4817 chr3R 3635961 3636169 + 67 NA promoter-TSS (FBgn0051472) protein_coding-promoter-TSS (FBgn0051472) -189 FBgn0051472 FBgn0051472 FBtr0081747 CG31472 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6802 chrU 2416727 2416831 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1750 chr2L 22090784 22090863 + 67 NA Intergenic Intergenic 11151 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2018 chr2R 2381957 2382058 + 67 NA Intergenic Intergenic 39093 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2011 chr2R 2066078 2066199 + 67 NA promoter-TSS (FBgn0011955) tRNA-promoter-TSS (FBgn0011955) 23 FBgn0011955 FBgn0011955 FBtr0086006 tRNA:R2:42Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_6917 chrUextra 8920258 8920326 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6913 chrUextra 8455407 8455473 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1263 chr2L 17271833 17271887 + 67 NA Intergenic Intergenic -11128 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6676 chrM 11524 11581 + 67 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6993 chrX 1474856 1474923 + 67 NA intron (FBgn0000210, intron 1 of 7) protein_coding-intron (FBgn0025390, intron 3 of 7) -22456 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5244 chr3R 10522966 10523148 + 67 NA promoter-TSS (FBgn0051314) protein_coding-promoter-TSS (FBgn0051314) 0 FBgn0051314 FBgn0051314 FBtr0301499 Neu3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4232 chr3L 16739027 16739096 + 67 NA Intergenic Intergenic -9528 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5815 chr3R 17959463 17959552 + 67 NA promoter-TSS (FBgn0051163) protein_coding-promoter-TSS (FBgn0051163) -50 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_328 chr2L 4770005 4770069 + 67 NA intron (FBgn0031627, intron 1 of 6) protein_coding-intron (FBgn0031627, intron 1 of 6) 7100 FBgn0260428 FBgn0260428 FBtr0300851 CG42523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1477 chr2L 19795816 19795879 + 67 NA promoter-TSS (FBgn0004811) protein_coding-promoter-TSS (FBgn0004811) 4 FBgn0004811 FBgn0004811 FBtr0332246 fs(2)ltoPP43 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6136 chr3R 23719531 23719605 + 67 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 11997 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5952 chr3R 21800441 21800510 + 67 NA intron (FBgn0259146, intron 1 of 2) protein_coding-intron (FBgn0259146, intron 1 of 2) 2181 FBgn0259146 FBgn0259146 FBtr0299575 CG42261 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1097 chr2L 15546985 15547049 + 67 NA promoter-TSS (FBgn0259922) protein_coding-promoter-TSS (FBgn0259922) -502 FBgn0259922 FBgn0259922 FBtr0300217 CG42448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_962 chr2L 14518342 14518401 + 67 NA promoter-TSS (FBgn0011863) tRNA-promoter-TSS (FBgn0011863) 6 FBgn0011863 FBgn0011863 FBtr0080666 tRNA:G3:35Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_5450 chr3R 13247757 13247842 + 67 NA exon (FBgn0038509, exon 1 of 1) protein_coding-exon (FBgn0038509, exon 1 of 1) 125 FBgn0038509 FBgn0038509 FBtr0083446 CG14332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2198 chr2R 5390284 5390361 + 67 NA promoter-TSS (FBgn0259246) protein_coding-promoter-TSS (FBgn0259246) -971 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_89 chr2L 1256257 1256320 + 67 NA promoter-TSS (FBgn0041097) protein_coding-promoter-TSS (FBgn0041097) -138 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7249 chrX 18541597 18541660 + 66 NA promoter-TSS (FBgn0030943) protein_coding-promoter-TSS (FBgn0030943) -32 FBgn0027335 FBgn0027335 FBtr0301545 Rip11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7015 chrX 2479957 2480013 + 66 NA promoter-TSS (FBgn0040066) protein_coding-promoter-TSS (FBgn0040066) -25 FBgn0040066 FBgn0040066 FBtr0070438 wds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_495 chr2L 7998786 7998843 + 66 NA promoter-TSS (FBgn0031971) protein_coding-promoter-TSS (FBgn0031971) -120 FBgn0031971 FBgn0031971 FBtr0079532 CG7224 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5651 chr3R 15615805 15615935 + 66 NA promoter-TSS (FBgn0012004) tRNA-promoter-TSS (FBgn0012004) 26 FBgn0012004 FBgn0012004 FBtr0083792 tRNA:V3b:92Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_6965 chrUextra 28090605 28090663 + 66 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2332 chr2R 7491117 7491179 + 66 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 1293 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4373 chr3L 18794450 18794516 + 66 NA promoter-TSS (FBgn0001078) protein_coding-promoter-TSS (FBgn0001078) 19292 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5228 chr3R 10141689 10141788 + 66 NA promoter-TSS (FBgn0011474) protein_coding-promoter-TSS (FBgn0011474) -293 FBgn0011474 FBgn0011474 FBtr0309996 pr-set7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7031 chrX 3571647 3571768 + 66 NA intron (FBgn0023215, intron 1 of 8) protein_coding-intron (FBgn0023215, intron 1 of 8) -6172 FBgn0023216 FBgn0023216 FBtr0307279 Parg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6881 chrUextra 380949 381005 + 66 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7247 chrX 18399496 18399578 + 66 NA promoter-TSS (FBgn0010194) protein_coding-promoter-TSS (FBgn0010194) -101 FBgn0010194 FBgn0010194 FBtr0074623 Wnt5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5920 chr3R 21061256 21061324 + 66 NA promoter-TSS (FBgn0039296) protein_coding-promoter-TSS (FBgn0039296) -50 FBgn0039296 FBgn0039296 FBtr0084870 CG10420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3735 chr3L 7504322 7504377 + 66 NA exon (FBgn0035793, exon 1 of 11) protein_coding-exon (FBgn0035793, exon 1 of 11) 263 FBgn0035793 FBgn0035793 FBtr0332143 CG7546 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2993 chr2R 18574281 18574371 + 66 NA exon (FBgn0020257, exon 1 of 1) protein_coding-exon (FBgn0020257, exon 1 of 1) 2152 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3979 chr3L 12523240 12523304 + 66 NA promoter-TSS (FBgn0036298) protein_coding-promoter-TSS (FBgn0036298) -1 FBgn0036298 FBgn0036298 FBtr0075967 nst protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4125 chr3L 14935288 14935351 + 66 NA exon (FBgn0259099, exon 11 of 11) protein_coding-exon (FBgn0259099, exon 11 of 11) 2112 FBgn0040809 FBgn0040809 FBtr0075674 CG13465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_72 chr2L 1077802 1077912 + 65 NA promoter-TSS (FBgn0015905) protein_coding-promoter-TSS (FBgn0015905) -46 FBgn0003310 FBgn0003310 FBtr0077994 S protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6369 chr3R 25632468 25632531 + 65 NA promoter-TSS (FBgn0000247) protein_coding-promoter-TSS (FBgn0000247) 350 FBgn0002924 FBgn0002924 FBtr0085534 ncd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3508 chr3L 2151944 2152000 + 65 NA promoter-TSS (FBgn0052311) protein_coding-promoter-TSS (FBgn0052311) -272 FBgn0052311 FBgn0052311 FBtr0332119 zormin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6969 chrUextra 28551716 28551788 + 65 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6360 chr3R 25551424 25551576 + 65 NA promoter-TSS (FBgn0039688) protein_coding-promoter-TSS (FBgn0039688) -52 FBgn0039688 FBgn0039688 FBtr0085460 Kul protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5883 chr3R 19747827 19747895 + 65 NA intron (FBgn0016754, intron 1 of 8) protein_coding-intron (FBgn0016754, intron 1 of 8) 834 FBgn0016754 FBgn0016754 FBtr0330380 sba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4245 chr3L 16884164 16884223 + 65 NA promoter-TSS (FBgn0261565) protein_coding-promoter-TSS (FBgn0261565) 3987 FBgn0261565 FBgn0261565 FBtr0302784 Lmpt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3178 chr2RHet 521684 521797 + 65 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5660 chr3R 15715722 15715831 + 65 NA promoter-TSS (FBgn0038744) protein_coding-promoter-TSS (FBgn0038744) -794 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4673 chr3R 1675087 1675153 + 65 NA TTS (FBgn0029088) protein_coding-TTS (FBgn0029088) 233 FBgn0037389 FBgn0037389 FBtr0306741 CR10991 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2231 chr2R 5837256 5837363 + 64 NA intron (FBgn0011656, intron 1 of 9) protein_coding-intron (FBgn0011656, intron 1 of 9) 9041 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3124 chr2R 20949266 20949403 + 64 NA promoter-TSS (FBgn0001148) protein_coding-promoter-TSS (FBgn0001148) -168 FBgn0001148 FBgn0001148 FBtr0072444 gsb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1156 chr2L 16189435 16189506 + 64 NA exon (FBgn0001991, exon 32 of 32) protein_coding-exon (FBgn0001991, exon 32 of 32) -10282 FBgn0264350 FBgn0264350 FBtr0332026 CR43806 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1466 chr2L 19715293 19715356 + 64 NA intron (FBgn0000464, intron 11 of 18) protein_coding-intron (FBgn0000464, intron 8 of 16) -14356 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5463 chr3R 13360303 13360393 + 64 NA promoter-TSS (FBgn0038515) protein_coding-promoter-TSS (FBgn0038515) -51 FBgn0038515 FBgn0038515 FBtr0321266 CG5823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6002 chr3R 22286397 22286456 + 64 NA promoter-TSS (FBgn0039430) protein_coding-promoter-TSS (FBgn0039430) 2351 FBgn0039429 FBgn0039429 FBtr0085014 CG14238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3395 chr2RHet 3238286 3238398 + 64 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4955 chr3R 5896059 5896114 + 64 NA promoter-TSS (FBgn0041105) protein_coding-promoter-TSS (FBgn0041105) -753 FBgn0041105 FBgn0041105 FBtr0330083 nerfin-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3356 chr2RHet 2246986 2247174 + 64 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1179 chr2L 16432930 16433021 + 64 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -12305 FBgn0020416 FBgn0020416 FBtr0080860 Idgf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2986 chr2R 18441668 18441778 + 64 NA intron (FBgn0003175, intron 3 of 14) protein_coding-intron (FBgn0003175, intron 3 of 13) 4124 FBgn0034736 FBgn0034736 FBtr0071835 CG6018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1921 chr2R 140449 140545 + 64 NA Intergenic Intergenic -10053 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6106 chr3R 23418596 23418680 + 64 NA intron (FBgn0039527, intron 1 of 4) protein_coding-intron (FBgn0039527, intron 1 of 4) 622 FBgn0039527 FBgn0039527 FBtr0085202 CG5639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2411 chr2R 8780343 8780420 + 64 NA exon (FBgn0003975, exon 4 of 8) protein_coding-exon (FBgn0003975, exon 4 of 8) 8675 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6873 chrUextra 206854 207660 + 64 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4640 chr3R 1193325 1193446 + 64 NA intron (FBgn0037315, intron 1 of 3) protein_coding-intron (FBgn0037315, intron 1 of 3) -1877 FBgn0085306 FBgn0085306 FBtr0332160 CG34277 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1272 chr2L 17351100 17351166 + 64 NA Intergenic Intergenic 3535 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5707 chr3R 16169502 16169590 + 64 NA TTS (FBgn0038789) protein_coding-TTS (FBgn0038789) 4557 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4013 chr3L 13037445 13037567 + 64 NA promoter-TSS (FBgn0036341) protein_coding-promoter-TSS (FBgn0036341) -232 FBgn0036341 FBgn0036341 FBtr0332076 Syx13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5268 chr3R 11218212 11218303 + 64 NA exon (FBgn0262483, exon 11 of 14) protein_coding-exon (FBgn0262483, exon 11 of 14) -9584 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6717 chrU 211497 211557 + 64 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6927 chrUextra 13674486 13674544 + 64 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_203 chr2L 3046561 3046638 + 63 NA promoter-TSS (FBgn0263847) ncRNA-promoter-TSS (FBgn0263847) -147 FBgn0263847 FBgn0263847 FBtr0321322 CR43708 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4827 chr3R 3790610 3790682 + 63 NA intron (FBgn0000504, intron 1 of 4) protein_coding-intron (FBgn0000504, intron 1 of 4) 2484 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7140 chrX 10708298 10708387 + 63 NA promoter-TSS (FBgn0262735) protein_coding-promoter-TSS (FBgn0262735) -216 FBgn0262735 FBgn0262735 FBtr0073419 Imp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3449 chr3L 1098604 1098748 + 63 NA intron (FBgn0004870, intron 1 of 1) protein_coding-intron (FBgn0004870, intron 1 of 3) 2413 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2552 chr2R 10871828 10871935 + 63 NA promoter-TSS (FBgn0050241) tRNA-promoter-TSS (FBgn0050241) 32 FBgn0050241 FBgn0050241 FBtr0087425 tRNA:CR30241 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4828 chr3R 3833822 3833893 + 63 NA promoter-TSS (FBgn0037537) protein_coding-promoter-TSS (FBgn0037537) -16 FBgn0037537 FBgn0037537 FBtr0290325 CG2767 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1795 chr2L 22359053 22359108 + 63 NA intron (FBgn0039972, intron 3 of 8) protein_coding-intron (FBgn0039972, intron 1 of 6) 4725 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1608 chr2L 21218542 21218596 + 63 NA promoter-TSS (FBgn0032934) protein_coding-promoter-TSS (FBgn0032934) -25 FBgn0032934 FBgn0032934 FBtr0081488 CG8679 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3805 chr3L 8991174 8991308 + 63 NA promoter-TSS (FBgn0035953) protein_coding-promoter-TSS (FBgn0035953) -43 FBgn0035953 FBgn0035953 FBtr0333908 CG5087 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2355 chr2R 7720385 7720443 + 63 NA intron (FBgn0033654, intron 2 of 3) protein_coding-intron (FBgn0033654, intron 2 of 3) 6621 FBgn0033654 FBgn0033654 FBtr0088064 Sobp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_501 chr2L 8140531 8140588 + 62 NA TTS (FBgn0263561) pre_miRNA-TTS (FBgn0263561) 1030 FBgn0263561 FBgn0263561 FBtr0309701 mir-4984 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6352 chr3R 25534194 25534298 + 62 NA Intergenic Intergenic -6015 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4290 chr3L 17480274 17480349 + 62 NA promoter-TSS (FBgn0036732) protein_coding-promoter-TSS (FBgn0036732) 93 FBgn0036732 FBgn0036732 FBtr0302041 Oatp74D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2621 chr2R 12107529 12107633 + 62 NA promoter-TSS (FBgn0050240) tRNA-promoter-TSS (FBgn0050240) 24 FBgn0050240 FBgn0050240 FBtr0087129 tRNA:CR30240 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1128 chr2L 15912626 15912715 + 62 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) -4218 FBgn0032577 FBgn0032577 FBtr0080792 CG13244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5010 chr3R 6715124 6715213 + 62 NA promoter-TSS (FBgn0042094) protein_coding-promoter-TSS (FBgn0042094) 142 FBgn0042094 FBgn0042094 FBtr0082330 Adk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7091 chrX 7201480 7201580 + 62 NA promoter-TSS (FBgn0024250) protein_coding-promoter-TSS (FBgn0024250) -444 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6359 chr3R 25542814 25542925 + 62 NA promoter-TSS (FBgn0039685) protein_coding-promoter-TSS (FBgn0039685) -251 FBgn0039685 FBgn0039685 FBtr0085462 Obp99b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6594 chr4 77099 77168 + 62 NA promoter-TSS (FBgn0004859) protein_coding-promoter-TSS (FBgn0004859) 10 FBgn0264617 FBgn0264617 FBtr0333704 CR43957 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6037 chr3R 22543075 22543149 + 62 NA promoter-TSS (FBgn0039450) protein_coding-promoter-TSS (FBgn0039450) -5 FBgn0039449 FBgn0039449 FBtr0085047 CG6425 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3049 chr2R 19563780 19563840 + 62 NA promoter-TSS (FBgn0034886) protein_coding-promoter-TSS (FBgn0034886) 3825 FBgn0250870 FBgn0250870 FBtr0290304 CG42241 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1038 chr2L 15005677 15005743 + 62 NA promoter-TSS (FBgn0040228) protein_coding-promoter-TSS (FBgn0040228) -23 FBgn0040228 FBgn0040228 FBtr0080693 dyn-p25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4594 chr3R 204530 204596 + 62 NA promoter-TSS (FBgn0037239) protein_coding-promoter-TSS (FBgn0037239) -466 FBgn0037239 FBgn0037239 FBtr0078916 CG11739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6755 chrU 1089524 1089600 + 62 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5630 chr3R 15412224 15412280 + 62 NA TTS (FBgn0065080) snoRNA-TTS (FBgn0065080) 334 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1774 chr2L 22261159 22261277 + 62 NA Intergenic Intergenic 11340 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1185 chr2L 16487733 16487836 + 62 NA promoter-TSS (FBgn0032585) protein_coding-promoter-TSS (FBgn0032585) -364 FBgn0032585 FBgn0032585 FBtr0080865 CG4580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7256 chrX 19047378 19047487 + 62 NA promoter-TSS (FBgn0261461) protein_coding-promoter-TSS (FBgn0261461) -6655 FBgn0261461 FBgn0261461 FBtr0299625 RhoGAP18B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1411 chr2L 19081517 19081586 + 62 NA exon (FBgn0002023, exon 4 of 8) protein_coding-exon (FBgn0002023, exon 4 of 8) -2523 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_353 chr2L 5306748 5306813 + 62 NA intron (FBgn0016076, intron 1 of 2) protein_coding-intron (FBgn0016076, intron 1 of 2) 1058 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1439 chr2L 19362907 19362983 + 62 NA exon (FBgn0024245, exon 1 of 4) protein_coding-exon (FBgn0024245, exon 1 of 4) 279 FBgn0024245 FBgn0024245 FBtr0081224 dnt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5672 chr3R 15834210 15834305 + 62 NA promoter-TSS (FBgn0038760) protein_coding-promoter-TSS (FBgn0038760) -13 FBgn0038755 FBgn0038755 FBtr0083846 Hs6st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_77 chr2L 1128479 1128541 + 62 NA promoter-TSS (FBgn0031304) protein_coding-promoter-TSS (FBgn0031304) -806 FBgn0031304 FBgn0031304 FBtr0077956 CG4552 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7204 chrX 15227336 15227452 + 62 NA promoter-TSS (FBgn0026428) protein_coding-promoter-TSS (FBgn0026428) 51 FBgn0026428 FBgn0026428 FBtr0301774 HDAC6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1386 chr2L 18677178 18677238 + 62 NA promoter-TSS (FBgn0086909) protein_coding-promoter-TSS (FBgn0086909) -210 FBgn0086681 FBgn0086681 FBtr0305341 Mst36Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6872 chrUextra 206592 206704 + 61 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7134 chrX 9980446 9980593 + 61 NA promoter-TSS (FBgn0083940) protein_coding-promoter-TSS (FBgn0083940) -47 FBgn0083940 FBgn0083940 FBtr0110782 CG34104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3434 chr3L 633487 633569 + 61 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 4513 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7087 chrX 7180226 7180296 + 61 NA promoter-TSS (FBgn0029942) protein_coding-promoter-TSS (FBgn0029942) -130 FBgn0029942 FBgn0029942 FBtr0071047 CG2059 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6772 chrU 1394034 1394173 + 61 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6273 chr3R 24973964 24974030 + 61 NA promoter-TSS (FBgn0014869) protein_coding-promoter-TSS (FBgn0014869) -103 FBgn0039642 FBgn0039642 FBtr0085411 CG11882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1194 chr2L 16588015 16588123 + 61 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -17876 FBgn0051815 FBgn0051815 FBtr0080870 CG31815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7154 chrX 12610089 12610156 + 61 NA intron (FBgn0263865, intron 3 of 10) protein_coding-intron (FBgn0263865, intron 2 of 9) 2371 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5211 chr3R 9784458 9784512 + 61 NA promoter-TSS (FBgn0016672) protein_coding-promoter-TSS (FBgn0016672) 12 FBgn0016672 FBgn0016672 FBtr0082865 Ipp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4382 chr3L 19093415 19093489 + 61 NA promoter-TSS (FBgn0036850) protein_coding-promoter-TSS (FBgn0036850) 11 FBgn0036850 FBgn0036850 FBtr0075032 Gem2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2139 chr2R 4570691 4570747 + 61 NA promoter-TSS (FBgn0011906) tRNA-promoter-TSS (FBgn0011906) -1 FBgn0011906 FBgn0011906 FBtr0088703 tRNA:L2:44EF tRNA Nup98-S2-pascual-garcia2017_R1_peak_937 chr2L 14355371 14355430 + 61 NA promoter-TSS (FBgn0261535) protein_coding-promoter-TSS (FBgn0261535) -320 FBgn0261535 FBgn0261535 FBtr0080639 l(2)34Fd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_288 chr2L 4345836 4345904 + 61 NA TTS (FBgn0020762) protein_coding-TTS (FBgn0020762) 2134 FBgn0262375 FBgn0262375 FBtr0304206 mir-1005 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6967 chrUextra 28342872 28342935 + 61 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4364 chr3L 18614872 18614951 + 60 NA promoter-TSS (FBgn0259791) protein_coding-promoter-TSS (FBgn0259791) 318 FBgn0013717 FBgn0013717 FBtr0290259 not protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2075 chr2R 3586409 3586484 + 60 NA promoter-TSS (FBgn0050493) protein_coding-promoter-TSS (FBgn0050493) -39 FBgn0033212 FBgn0033212 FBtr0088940 CG1399 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2910 chr2R 17070176 17070407 + 60 NA promoter-TSS (FBgn0011872) tRNA-promoter-TSS (FBgn0011872) -37 FBgn0050209 FBgn0050209 FBtr0071626 tRNA:CR30209 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3522 chr3L 2636287 2636341 + 60 NA promoter-TSS (FBgn0035357) protein_coding-promoter-TSS (FBgn0035357) 4599 FBgn0035357 FBgn0035357 FBtr0072936 MEP-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_867 chr2L 13445705 13445782 + 60 NA promoter-TSS (FBgn0032524) protein_coding-promoter-TSS (FBgn0032524) -92 FBgn0032524 FBgn0032524 FBtr0080519 CG9267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2270 chr2R 6444712 6444772 + 60 NA promoter-TSS (FBgn0263102) protein_coding-promoter-TSS (FBgn0263102) -651 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2208 chr2R 5474626 5474680 + 60 NA promoter-TSS (FBgn0025286) protein_coding-promoter-TSS (FBgn0025286) -293 FBgn0025286 FBgn0025286 FBtr0088527 RpL31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_492 chr2L 7956954 7957018 + 60 NA exon (FBgn0085450, exon 2 of 2) protein_coding-exon (FBgn0085450, exon 2 of 2) 20079 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_851 chr2L 13060294 13060446 + 60 NA promoter-TSS (FBgn0262160) protein_coding-promoter-TSS (FBgn0262160) -255 FBgn0262160 FBgn0262160 FBtr0089956 CG9932 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6073 chr3R 23136761 23136818 + 60 NA exon (FBgn0039510, exon 17 of 32) protein_coding-exon (FBgn0039510, exon 17 of 32) 11258 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7119 chrX 9033269 9033433 + 60 NA Intergenic Intergenic -3234 FBgn0030091 FBgn0030091 FBtr0071299 CG7065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6248 chr3R 24602306 24602443 + 60 NA Intergenic Intergenic -12965 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5793 chr3R 17346615 17346678 + 59 NA promoter-TSS (FBgn0038890) protein_coding-promoter-TSS (FBgn0038890) -21 FBgn0038890 FBgn0038890 FBtr0301212 CG7956 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2701 chr2R 13492021 13492117 + 59 NA promoter-TSS (FBgn0050231) tRNA-promoter-TSS (FBgn0050231) 43 FBgn0050333 FBgn0050333 FBtr0086898 tRNA:CR30333 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3911 chr3L 11278786 11278859 + 59 NA Intergenic Intergenic 10197 FBgn0036152 FBgn0036152 FBtr0076183 CG6175 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1762 chr2L 22200694 22200763 + 59 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 13537 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2803 chr2R 15302060 15302128 + 59 NA promoter-TSS (FBgn0028981) tRNA-promoter-TSS (FBgn0028981) -9 FBgn0028981 FBgn0028981 FBtr0086526 tRNA:S4:56D tRNA Nup98-S2-pascual-garcia2017_R1_peak_6368 chr3R 25628661 25628721 + 59 NA promoter-TSS (FBgn0039698) protein_coding-promoter-TSS (FBgn0039698) -125 FBgn0039697 FBgn0039697 FBtr0085536 CG7834 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4910 chr3R 5121200 5121262 + 59 NA exon (FBgn0037676, exon 4 of 4) protein_coding-exon (FBgn0037676, exon 4 of 4) -26261 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3494 chr3L 1876308 1876432 + 59 NA promoter-TSS (FBgn0002183) protein_coding-promoter-TSS (FBgn0002183) -58 FBgn0002183 FBgn0002183 FBtr0072865 dre4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1604 chr2L 21199639 21199700 + 59 NA promoter-TSS (FBgn0011829) protein_coding-promoter-TSS (FBgn0011829) 594 FBgn0051624 FBgn0051624 FBtr0301928 CG31624 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_658 chr2L 9918158 9918218 + 59 NA promoter-TSS (FBgn0032160) protein_coding-promoter-TSS (FBgn0032160) -12 FBgn0025700 FBgn0025700 FBtr0079900 CG5885 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1808 chr2L 22492085 22492202 + 59 NA Intergenic Intergenic 19661 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1389 chr2L 18735918 18736044 + 59 NA Intergenic Intergenic 4025 FBgn0261806 FBgn0261806 FBtr0303282 CG42752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_801 chr2L 12609990 12610053 + 59 NA TTS (FBgn0032439) protein_coding-TTS (FBgn0032439) -8327 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5094 chr3R 8101573 8101652 + 59 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) 2764 FBgn0259975 FBgn0259975 FBtr0300319 Sfp87B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7098 chrX 7986261 7986330 + 59 NA promoter-TSS (FBgn0029996) protein_coding-promoter-TSS (FBgn0029996) -170 FBgn0029996 FBgn0029996 FBtr0071114 Ubc-E2H protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3616 chr3L 5758603 5758658 + 58 NA promoter-TSS (FBgn0035631) protein_coding-promoter-TSS (FBgn0035631) 61 FBgn0035630 FBgn0035630 FBtr0077121 CG10576 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2620 chr2R 12107162 12107222 + 58 NA promoter-TSS (FBgn0050239) tRNA-promoter-TSS (FBgn0050239) 49 FBgn0050239 FBgn0050239 FBtr0087128 tRNA:CR30239 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6971 chrUextra 28604136 28604297 + 58 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3476 chr3L 1496616 1496673 + 58 NA promoter-TSS (FBgn0043458) protein_coding-promoter-TSS (FBgn0043458) -1 FBgn0043458 FBgn0043458 FBtr0072711 CG12084 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5954 chr3R 21809140 21809219 + 58 NA intron (FBgn0015269, intron 1 of 16) protein_coding-intron (FBgn0015269, intron 1 of 17) 444 FBgn0015269 FBgn0015269 FBtr0084952 Nf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6367 chr3R 25625049 25625106 + 58 NA promoter-TSS (FBgn0019972) protein_coding-promoter-TSS (FBgn0019972) -22 FBgn0039696 FBgn0039696 FBtr0085537 CG7837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6274 chr3R 24978991 24979047 + 58 NA promoter-TSS (FBgn0028692) protein_coding-promoter-TSS (FBgn0028692) -50 FBgn0041186 FBgn0041186 FBtr0085409 Slbp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2805 chr2R 15324746 15324800 + 58 NA promoter-TSS (FBgn0040273) protein_coding-promoter-TSS (FBgn0040273) 1 FBgn0020440 FBgn0020440 FBtr0086544 Fak56D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5938 chr3R 21707116 21707255 + 58 NA promoter-TSS (FBgn0039381) protein_coding-promoter-TSS (FBgn0039381) -23 FBgn0027865 FBgn0027865 FBtr0330163 Tsp96F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2108 chr2R 4051004 4051079 + 58 NA promoter-TSS (FBgn0033272) protein_coding-promoter-TSS (FBgn0033272) -23 FBgn0033272 FBgn0033272 FBtr0088807 RagC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2300 chr2R 7177286 7177345 + 58 NA promoter-TSS (FBgn0033609) protein_coding-promoter-TSS (FBgn0033609) -62 FBgn0033609 FBgn0033609 FBtr0088178 fbl6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5876 chr3R 19605041 19606143 + 58 NA exon (FBgn0039120, exon 2 of 9) protein_coding-exon (FBgn0039120, exon 2 of 9) 1539 FBgn0039120 FBgn0039120 FBtr0304567 Nup98-96 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_514 chr2L 8492641 8492705 + 58 NA TTS (FBgn0032048) protein_coding-TTS (FBgn0032048) 1934 FBgn0263314 FBgn0263314 FBtr0308708 CG43400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1166 chr2L 16280072 16280126 + 57 NA intron (FBgn0001994, intron 1 of 2) protein_coding-intron (FBgn0001994, intron 1 of 2) 7629 FBgn0001994 FBgn0001994 FBtr0080854 crp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_522 chr2L 8544192 8544267 + 57 NA intron (FBgn0011259, intron 1 of 20) protein_coding-intron (FBgn0011259, intron 1 of 21) 899 FBgn0011259 FBgn0011259 FBtr0329930 Sema-1a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3557 chr3L 3472307 3472371 + 57 NA promoter-TSS (FBgn0052267) protein_coding-promoter-TSS (FBgn0052267) -108 FBgn0259224 FBgn0259224 FBtr0299777 CG42324 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1938 chr2R 544947 545012 + 57 NA Intergenic Intergenic -14383 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_428 chr2L 6498570 6498656 + 57 NA promoter-TSS (FBgn0051637) protein_coding-promoter-TSS (FBgn0051637) -29 FBgn0051637 FBgn0051637 FBtr0079287 CG31637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3020 chr2R 18962299 18962363 + 57 NA promoter-TSS (FBgn0034816) protein_coding-promoter-TSS (FBgn0034816) -21 FBgn0034816 FBgn0034816 FBtr0071963 CG3085 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3620 chr3L 5804018 5804095 + 57 NA promoter-TSS (FBgn0035639) protein_coding-promoter-TSS (FBgn0035639) -17 FBgn0035639 FBgn0035639 FBtr0310534 CG5537 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3478 chr3L 1536822 1536879 + 57 NA promoter-TSS (FBgn0035229) protein_coding-promoter-TSS (FBgn0035229) -15 FBgn0035228 FBgn0035228 FBtr0072831 CG12091 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4387 chr3L 19253764 19253826 + 57 NA promoter-TSS (FBgn0260857) protein_coding-promoter-TSS (FBgn0260857) -16 FBgn0026630 FBgn0026630 FBtr0075020 nes protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2225 chr2R 5779171 5779233 + 57 NA promoter-TSS (FBgn0050007) protein_coding-promoter-TSS (FBgn0050007) -294 FBgn0050007 FBgn0050007 FBtr0300921 CG30007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6832 chrU 3555002 3555219 + 57 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6690 chrU 79788 80018 + 57 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_467 chr2L 7200078 7200139 + 57 NA intron (FBgn0031896, intron 1 of 4) protein_coding-intron (FBgn0031896, intron 1 of 5) 4156 FBgn0031896 FBgn0031896 FBtr0079417 CG4502 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3438 chr3L 692875 692976 + 57 NA promoter-TSS (FBgn0260862) protein_coding-promoter-TSS (FBgn0260862) -6 FBgn0260862 FBgn0260862 FBtr0072607 Vti1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4734 chr3R 2585357 2585446 + 56 NA promoter-TSS (FBgn0000166) protein_coding-promoter-TSS (FBgn0000166) -202 FBgn0000166 FBgn0000166 FBtr0081668 bcd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1472 chr2L 19743957 19744045 + 56 NA exon (FBgn0032817, exon 7 of 8) protein_coding-exon (FBgn0032817, exon 7 of 8) 7959 FBgn0032816 FBgn0032816 FBtr0081289 Nf-YB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7176 chrX 12962514 12962575 + 56 NA exon (FBgn0261388, exon 5 of 15) protein_coding-exon (FBgn0261388, exon 5 of 15) 6380 FBgn0262222 FBgn0262222 FBtr0304282 mir-971 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4820 chr3R 3697506 3697564 + 56 NA exon (FBgn0037525, exon 4 of 15) protein_coding-exon (FBgn0037525, exon 4 of 15) 14920 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5461 chr3R 13342575 13342633 + 56 NA Intergenic Intergenic -11215 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_652 chr2L 9861371 9861427 + 56 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 13110 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3932 chr3L 11736893 11736982 + 56 NA exon (FBgn0036202, exon 3 of 8) protein_coding-exon (FBgn0036202, exon 3 of 8) -7468 FBgn0041231 FBgn0041231 FBtr0076118 Gr68a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1373 chr2L 18386194 18386286 + 56 NA exon (FBgn0000636, exon 5 of 5) protein_coding-exon (FBgn0000636, exon 5 of 5) 7614 FBgn0085200 FBgn0085200 FBtr0305066 CG34171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2597 chr2R 11709925 11709993 + 56 NA Intergenic Intergenic -1359 FBgn0053465 FBgn0053465 FBtr0301048 CG33465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6956 chrUextra 25505606 25505697 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3 chr2L 18613 18691 + 56 NA promoter-TSS (FBgn0002121) protein_coding-promoter-TSS (FBgn0002121) 2724 FBgn0002121 FBgn0002121 FBtr0078171 l(2)gl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_660 chr2L 9989942 9990031 + 56 NA intron (FBgn0000180, intron 3 of 4) protein_coding-intron (FBgn0000180, intron 3 of 4) -5243 FBgn0040965 FBgn0040965 FBtr0079974 CG13130 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7073 chrX 5931446 5931519 + 56 NA promoter-TSS (FBgn0029833) protein_coding-promoter-TSS (FBgn0029833) 351 FBgn0003302 FBgn0003302 FBtr0070889 rux protein_coding Nup98-S2-pascual-garcia2017_R1_peak_291 chr2L 4356890 4356959 + 56 NA Intergenic Intergenic 3949 FBgn0031596 FBgn0031596 FBtr0077428 CG15429 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1605 chr2L 21204125 21204192 + 56 NA Intergenic Intergenic -1416 FBgn0051988 FBgn0051988 FBtr0081490 CG31988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5420 chr3R 12746273 12746337 + 56 NA intron (FBgn0263610, intron 1 of 7) ncRNA-intron (FBgn0263610, intron 1 of 7) 2650 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6397 chr3R 26198426 26198492 + 56 NA Intergenic Intergenic 14882 FBgn0015222 FBgn0015222 FBtr0332170 Fer1HCH protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2245 chr2R 6117274 6117331 + 56 NA intron (FBgn0000448, intron 1 of 8) protein_coding-intron (FBgn0000448, intron 1 of 8) -1844 FBgn0000448 FBgn0000448 FBtr0306346 Hr46 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6813 chrU 2646426 2646510 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3005 chr2R 18799534 18799622 + 56 NA exon (FBgn0034797, exon 5 of 11) protein_coding-exon (FBgn0034797, exon 5 of 11) 6711 FBgn0050187 FBgn0050187 FBtr0304796 CG30187 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6217 chr3R 24398201 24398255 + 56 NA Intergenic Intergenic 12606 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4969 chr3R 6263515 6263645 + 56 NA Intergenic Intergenic 3069 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1853 chr2L 22702621 22702709 + 56 NA Intergenic Intergenic -11657 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6798 chrU 2311717 2311823 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1178 chr2L 16422908 16422983 + 56 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -5061 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4229 chr3L 16723946 16724007 + 56 NA promoter-TSS (FBgn0004556) protein_coding-promoter-TSS (FBgn0004556) -58 FBgn0004556 FBgn0004556 FBtr0075347 Dbp73D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5154 chr3R 8890184 8890275 + 56 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 6748 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5967 chr3R 21998063 21998160 + 56 NA intron (FBgn0051323, intron 1 of 4) protein_coding-intron (FBgn0051323, intron 1 of 4) 1540 FBgn0051323 FBgn0051323 FBtr0307339 CG31323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5624 chr3R 15342237 15342296 + 56 NA intron (FBgn0260003, intron 1 of 14) protein_coding-intron (FBgn0260003, intron 22 of 34) -25429 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3291 chr2RHet 1920276 1920375 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4752 chr3R 2733933 2733999 + 56 NA exon (FBgn0260642, exon 5 of 5) protein_coding-exon (FBgn0260642, exon 5 of 5) -3562 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1862 chr2L 22711262 22711436 + 56 NA Intergenic Intergenic -20341 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2456 chr2R 9317781 9317880 + 56 NA promoter-TSS (FBgn0011882) tRNA-promoter-TSS (FBgn0011882) 30 FBgn0011881 FBgn0011881 FBtr0087713 tRNA:I:49Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_6733 chrU 283095 283242 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6429 chr3R 26738517 26738590 + 56 NA promoter-TSS (FBgn0020912) protein_coding-promoter-TSS (FBgn0020912) -57 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7046 chrX 4320790 4320874 + 56 NA promoter-TSS (FBgn0000179) protein_coding-promoter-TSS (FBgn0000179) 13943 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2455 chr2R 9291313 9291385 + 56 NA Intergenic Intergenic -3162 FBgn0033835 FBgn0033835 FBtr0087655 IM10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2558 chr2R 11015828 11015915 + 56 NA promoter-TSS (FBgn0015371) protein_coding-promoter-TSS (FBgn0015371) 13109 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5383 chr3R 12405933 12406012 + 56 NA intron (FBgn0020907, intron 1 of 4) protein_coding-intron (FBgn0020907, intron 1 of 4) 3410 FBgn0020907 FBgn0020907 FBtr0083361 Scp2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_411 chr2L 6136881 6136992 + 56 NA Intergenic Intergenic -2525 FBgn0031785 FBgn0031785 FBtr0079202 CG13991 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5654 chr3R 15628377 15628510 + 56 NA promoter-TSS (FBgn0051471) tRNA-promoter-TSS (FBgn0051471) 31 FBgn0051471 FBgn0051471 FBtr0083794 tRNA:CR31471 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6183 chr3R 24059874 24059959 + 56 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 29428 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3019 chr2R 18959525 18959643 + 56 NA promoter-TSS (FBgn0050202) tRNA-promoter-TSS (FBgn0050202) 39 FBgn0050201 FBgn0050201 FBtr0071983 tRNA:CR30201 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4684 chr3R 1891987 1892051 + 56 NA Intergenic Intergenic -8760 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6207 chr3R 24273343 24273421 + 56 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) 29452 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6793 chrU 1975149 1975215 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_650 chr2L 9816225 9816333 + 56 NA intron (FBgn0032151, intron 5 of 13) protein_coding-intron (FBgn0032151, intron 4 of 13) -23172 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1659 chr2L 21770986 21771043 + 56 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 13004 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1655 chr2L 21767037 21767111 + 56 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 9064 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3338 chr2RHet 2143988 2144065 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4978 chr3R 6353480 6353546 + 56 NA intron (FBgn0001235, intron 9 of 12) protein_coding-intron (FBgn0001235, intron 8 of 11) -14735 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_74 chr2L 1095648 1095706 + 56 NA intron (FBgn0031299, intron 1 of 7) protein_coding-intron (FBgn0031299, intron 2 of 8) 6827 FBgn0031299 FBgn0031299 FBtr0332571 CG4629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2267 chr2R 6310776 6310838 + 56 NA TTS (FBgn0053474) protein_coding-TTS (FBgn0053474) 1069 FBgn0053474 FBgn0053474 FBtr0088260 CG33474 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2468 chr2R 9495795 9495949 + 56 NA TTS (FBgn0033861) protein_coding-TTS (FBgn0033861) 811 FBgn0033861 FBgn0033861 FBtr0087652 CG12464 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3867 chr3L 10592632 10592699 + 56 NA Intergenic Intergenic 24011 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_263 chr2L 4104763 4104818 + 56 NA intron (FBgn0000547, intron 7 of 8) protein_coding-intron (FBgn0000547, intron 7 of 8) -15573 FBgn0020376 FBgn0020376 FBtr0077466 Sr-CIII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2616 chr2R 12066293 12066354 + 56 NA promoter-TSS (FBgn0015754) protein_coding-promoter-TSS (FBgn0015754) -8 FBgn0015754 FBgn0015754 FBtr0087241 Lis-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_242 chr2L 3662194 3662280 + 56 NA promoter-TSS (FBgn0085369) protein_coding-promoter-TSS (FBgn0085369) -508 FBgn0085369 FBgn0085369 FBtr0302391 CG34340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4835 chr3R 3965239 3965346 + 56 NA promoter-TSS (FBgn0051583) tRNA-promoter-TSS (FBgn0051583) 36 FBgn0051583 FBgn0051583 FBtr0081814 tRNA:N5:84F tRNA Nup98-S2-pascual-garcia2017_R1_peak_2966 chr2R 18131308 18131367 + 56 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -15613 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2407 chr2R 8701898 8701957 + 56 NA Intergenic Intergenic 7745 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7229 chrX 17291265 17291365 + 56 NA promoter-TSS (FBgn0011758) protein_coding-promoter-TSS (FBgn0011758) -219 FBgn0011758 FBgn0011758 FBtr0074430 B-H1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2778 chr2R 14798846 14798900 + 56 NA exon (FBgn0028669, exon 1 of 1) protein_coding-exon (FBgn0028669, exon 1 of 1) 346 FBgn0028669 FBgn0028669 FBtr0086602 Vha100-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1312 chr2L 17804797 17804875 + 56 NA intron (FBgn0262018, intron 7 of 14) protein_coding-intron (FBgn0262018, intron 6 of 13) 7836 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1885 chr2L 22918822 22918881 + 56 NA promoter-TSS (FBgn0250907) protein_coding-promoter-TSS (FBgn0250907) -291 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6588 chr3RHet 2101423 2101490 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5197 chr3R 9623545 9623713 + 56 NA promoter-TSS (FBgn0051588) tRNA-promoter-TSS (FBgn0051588) -46 FBgn0051588 FBgn0051588 FBtr0082834 tRNA:CR31588 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7260 chrX 19716874 19716936 + 56 NA TTS (FBgn0031074) protein_coding-TTS (FBgn0031074) 1127 FBgn0031074 FBgn0031074 FBtr0074806 skpE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4740 chr3R 2618689 2618794 + 56 NA exon (FBgn0000439, exon 1 of 5) protein_coding-exon (FBgn0000439, exon 1 of 5) 1183 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6747 chrU 596230 596286 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4928 chr3R 5230035 5230100 + 56 NA promoter-TSS (FBgn0037689) protein_coding-promoter-TSS (FBgn0037689) -30 FBgn0037689 FBgn0037689 FBtr0082030 CG8135 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5475 chr3R 13450268 13450338 + 56 NA promoter-TSS (FBgn0038530) protein_coding-promoter-TSS (FBgn0038530) 57 FBgn0011993 FBgn0011993 FBtr0083497 tRNA:T:90Ca tRNA Nup98-S2-pascual-garcia2017_R1_peak_5358 chr3R 12223198 12223298 + 56 NA intron (FBgn0003513, intron 2 of 8) protein_coding-intron (FBgn0003513, intron 2 of 7) 6164 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2099 chr2R 3918443 3918550 + 56 NA promoter-TSS (FBgn0025360) protein_coding-promoter-TSS (FBgn0025360) -293 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5818 chr3R 18002614 18002688 + 56 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -34895 FBgn0038934 FBgn0038934 FBtr0305038 Gld2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_833 chr2L 12852576 12852685 + 56 NA Intergenic Intergenic -29843 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6164 chr3R 23955096 23955165 + 56 NA Intergenic Intergenic -17472 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_955 chr2L 14470112 14470181 + 56 NA Intergenic Intergenic -19224 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4878 chr3R 4459647 4459725 + 56 NA TTS (FBgn0026399) protein_coding-TTS (FBgn0026399) 1914 FBgn0026399 FBgn0026399 FBtr0310300 Or85e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1308 chr2L 17796837 17796952 + 56 NA exon (FBgn0262018, exon 10 of 14) protein_coding-exon (FBgn0262018, exon 10 of 14) 4482 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_814 chr2L 12673454 12673515 + 56 NA exon (FBgn0004394, exon 3 of 5) protein_coding-exon (FBgn0004394, exon 3 of 5) -3770 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6919 chrUextra 9037351 9037429 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3164 chr2RHet 374146 374215 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5561 chr3R 14409769 14409842 + 56 NA promoter-TSS (FBgn0023083) protein_coding-promoter-TSS (FBgn0023083) -1857 FBgn0023083 FBgn0023083 FBtr0290210 fray protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3214 chr2RHet 946617 946692 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6062 chr3R 22937971 22938038 + 56 NA promoter-TSS (FBgn0027574) protein_coding-promoter-TSS (FBgn0027574) -27 FBgn0039487 FBgn0039487 FBtr0085132 gb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2985 chr2R 18404826 18404880 + 56 NA intron (FBgn0003175, intron 12 of 14) protein_coding-intron (FBgn0003175, intron 12 of 13) 25151 FBgn0034735 FBgn0034735 FBtr0071834 CG4610 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3775 chr3L 8384794 8384902 + 56 NA TTS (FBgn0001253) protein_coding-TTS (FBgn0001253) 208 FBgn0035886 FBgn0035886 FBtr0076608 Jon66Ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4724 chr3R 2504385 2504451 + 56 NA promoter-TSS (FBgn0002522) protein_coding-promoter-TSS (FBgn0002522) -5754 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2832 chr2R 15688047 15688106 + 56 NA Intergenic Intergenic -2020 FBgn0011897 FBgn0011897 FBtr0086334 tRNA:K2:56EF tRNA Nup98-S2-pascual-garcia2017_R1_peak_2752 chr2R 14349282 14349344 + 56 NA exon (FBgn0028496, exon 15 of 19) protein_coding-exon (FBgn0028496, exon 15 of 19) -7346 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6928 chrUextra 13855997 13856060 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1501 chr2L 20054370 20054438 + 56 NA exon (FBgn0032840, exon 3 of 5) protein_coding-exon (FBgn0032840, exon 3 of 5) 6571 FBgn0014127 FBgn0014127 FBtr0081349 barr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7271 chrX 21195047 21195108 + 56 NA promoter-TSS (FBgn0031174) protein_coding-promoter-TSS (FBgn0031174) -17 FBgn0029067 FBgn0029067 FBtr0077226 Dd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1716 chr2L 21996385 21996446 + 56 NA Intergenic Intergenic -3482 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_914 chr2L 14169130 14169215 + 56 NA intron (FBgn0263038, intron 1 of 5) protein_coding-intron (FBgn0263038, intron 1 of 5) -5950 FBgn0263037 FBgn0263037 FBtr0306928 CG43332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3014 chr2R 18930705 18930763 + 56 NA promoter-TSS (FBgn0261705) protein_coding-promoter-TSS (FBgn0261705) -272 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3634 chr3L 6012523 6012623 + 56 NA exon (FBgn0052406, exon 3 of 7) protein_coding-exon (FBgn0052406, exon 3 of 7) -8452 FBgn0035657 FBgn0035657 FBtr0077069 alphaKap4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3168 chr2RHet 408860 408924 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3572 chr3L 4034451 4034505 + 56 NA TTS (FBgn0035486) protein_coding-TTS (FBgn0035486) 711 FBgn0045476 FBgn0045476 FBtr0073200 Gr64e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2205 chr2R 5464981 5465050 + 56 NA promoter-TSS (FBgn0033426) protein_coding-promoter-TSS (FBgn0033426) 1497 FBgn0085436 FBgn0085436 FBtr0302122 Not1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6796 chrU 2294945 2295008 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3997 chr3L 12721715 12721769 + 56 NA Intergenic Intergenic 5969 FBgn0261933 FBgn0261933 FBtr0075952 SmD1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6585 chr3RHet 2097947 2098057 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6895 chrUextra 1774360 1774434 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3121 chr2R 20815869 20815953 + 56 NA promoter-TSS (FBgn0060296) protein_coding-promoter-TSS (FBgn0060296) -4792 FBgn0060296 FBgn0060296 FBtr0333814 pain protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6827 chrU 3533932 3534017 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_880 chr2L 13668143 13668212 + 56 NA exon (FBgn0028527, exon 2 of 5) protein_coding-exon (FBgn0028527, exon 2 of 5) 2652 FBgn0028527 FBgn0028527 FBtr0080527 CG18507 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5456 chr3R 13304961 13305067 + 56 NA exon (FBgn0261046, exon 27 of 35) protein_coding-exon (FBgn0261046, exon 27 of 35) -22516 FBgn0038512 FBgn0038512 FBtr0083443 CG14330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1814 chr2L 22539410 22539491 + 56 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 66968 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_221 chr2L 3345871 3345974 + 56 NA intron (FBgn0020445, intron 3 of 9) protein_coding-intron (FBgn0020445, intron 2 of 8) 9078 FBgn0020445 FBgn0020445 FBtr0089980 E23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7191 chrX 13715131 13715190 + 56 NA intron (FBgn0030529, intron 1 of 3) protein_coding-intron (FBgn0030529, intron 1 of 3) -1699 FBgn0027537 FBgn0027537 FBtr0331714 CG11092 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_506 chr2L 8334830 8334930 + 56 NA Intergenic Intergenic -3407 FBgn0032023 FBgn0032023 FBtr0079604 CG14274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2191 chr2R 5211321 5211386 + 56 NA intron (FBgn0033403, intron 2 of 3) protein_coding-intron (FBgn0033403, intron 2 of 3) -10746 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5916 chr3R 20992903 20992968 + 56 NA Intergenic Intergenic -17170 FBgn0039286 FBgn0039286 FBtr0330288 dan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_33 chr2L 755823 755879 + 56 NA promoter-TSS (FBgn0031275) protein_coding-promoter-TSS (FBgn0031275) 5242 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_721 chr2L 11255482 11255565 + 56 NA exon (FBgn0264442, exon 7 of 7) protein_coding-exon (FBgn0264442, exon 7 of 7) 13479 FBgn0040232 FBgn0040232 FBtr0332205 cmet protein_coding Nup98-S2-pascual-garcia2017_R1_peak_649 chr2L 9807271 9807370 + 56 NA exon (FBgn0032151, exon 8 of 14) protein_coding-exon (FBgn0032151, exon 8 of 14) -14213 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3894 chr3L 10733272 10733370 + 56 NA Intergenic Intergenic -31771 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4998 chr3R 6500985 6501065 + 56 NA TTS (FBgn0037818) protein_coding-TTS (FBgn0037818) 1867 FBgn0037818 FBgn0037818 FBtr0082323 CG6465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1362 chr2L 18281346 18281402 + 56 NA Intergenic Intergenic 4310 FBgn0051787 FBgn0051787 FBtr0081055 CG31787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2931 chr2R 17448914 17448968 + 56 NA exon (FBgn0034636, exon 5 of 5) protein_coding-exon (FBgn0034636, exon 5 of 5) 13867 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3992 chr3L 12683922 12684000 + 56 NA Intergenic Intergenic -2778 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1786 chr2L 22340753 22340838 + 56 NA exon (FBgn0263091, exon 1 of 1) pseudogene-exon (FBgn0263091, exon 1 of 1) 173 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4086 chr3L 14181501 14181566 + 56 NA exon (FBgn0036414, exon 3 of 9) protein_coding-exon (FBgn0036414, exon 3 of 9) 1215 FBgn0036414 FBgn0036414 FBtr0321258 nan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5107 chr3R 8195075 8195137 + 56 NA promoter-TSS (FBgn0001149) protein_coding-promoter-TSS (FBgn0001149) -689 FBgn0001149 FBgn0001149 FBtr0082607 GstD1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6671 chrM 2821 2880 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1840 chr2L 22629887 22629941 + 56 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 14613 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4692 chr3R 2041410 2041467 + 56 NA promoter-TSS (FBgn0037411) protein_coding-promoter-TSS (FBgn0037411) -122 FBgn0037411 FBgn0037411 FBtr0078594 Osi3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7022 chrX 2921806 2921874 + 56 NA intron (FBgn0028369, intron 6 of 10) protein_coding-intron (FBgn0028369, intron 6 of 12) 38756 FBgn0028369 FBgn0028369 FBtr0070560 kirre protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4399 chr3L 19942610 19942673 + 56 NA TTS (FBgn0052219) protein_coding-TTS (FBgn0052219) 1594 FBgn0052219 FBgn0052219 FBtr0074914 CG32219 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_326 chr2L 4737640 4737699 + 56 NA exon (FBgn0031627, exon 3 of 7) protein_coding-exon (FBgn0031627, exon 3 of 7) -3211 FBgn0031626 FBgn0031626 FBtr0077419 CG15631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6673 chrM 3494 3549 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5750 chr3R 16716793 16716893 + 56 NA promoter-TSS (FBgn0051334) tRNA-promoter-TSS (FBgn0051334) -1 FBgn0051334 FBgn0051334 FBtr0083976 tRNA:CR31334 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3243 chr2RHet 1454356 1454436 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1947 chr2R 818812 818882 + 56 NA Intergenic Intergenic -18325 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5411 chr3R 12655909 12655988 + 56 NA promoter-TSS (FBgn0000014) protein_coding-promoter-TSS (FBgn0000014) -181 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2143 chr2R 4634432 4634499 + 56 NA intron (FBgn0027585, intron 2 of 8) protein_coding-intron (FBgn0027585, intron 1 of 7) 9590 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4814 chr3R 3579431 3579527 + 56 NA Intergenic Intergenic -3681 FBgn0037513 FBgn0037513 FBtr0081780 pyd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3351 chr2RHet 2237843 2237911 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4483 chr3L 23583640 23583704 + 56 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 34647 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1664 chr2L 21780845 21780899 + 56 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) 3193 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2557 chr2R 10981274 10981356 + 56 NA Intergenic Intergenic -21447 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7058 chrX 5454621 5454756 + 56 NA promoter-TSS (FBgn0263512) protein_coding-promoter-TSS (FBgn0263512) -472 FBgn0263512 FBgn0263512 FBtr0100024 Vsx2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4744 chr3R 2674282 2674453 + 56 NA promoter-TSS (FBgn0003339) protein_coding-promoter-TSS (FBgn0003339) 1336 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4838 chr3R 3968318 3968408 + 56 NA Intergenic Intergenic -1599 FBgn0011959 FBgn0011959 FBtr0081809 tRNA:R2:84Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_2437 chr2R 9149899 9149954 + 56 NA promoter-TSS (FBgn0259219) protein_coding-promoter-TSS (FBgn0259219) -64 FBgn0259219 FBgn0259219 FBtr0299738 CG42319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3461 chr3L 1178484 1178539 + 56 NA Intergenic Intergenic -1235 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4607 chr3R 659496 659617 + 56 NA Intergenic Intergenic -2537 FBgn0037284 FBgn0037284 FBtr0078873 CG14659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_19 chr2L 594866 594939 + 56 NA promoter-TSS (FBgn0010323) protein_coding-promoter-TSS (FBgn0010323) -92 FBgn0010323 FBgn0010323 FBtr0078072 Gsc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5027 chr3R 6960410 6960480 + 56 NA Intergenic Intergenic -2454 FBgn0037862 FBgn0037862 FBtr0082336 CG4706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2008 chr2R 2053647 2053752 + 56 NA promoter-TSS (FBgn0011880) tRNA-promoter-TSS (FBgn0011880) 43 FBgn0011880 FBgn0011880 FBtr0085984 tRNA:I:42A tRNA Nup98-S2-pascual-garcia2017_R1_peak_3371 chr2RHet 2316854 2316908 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3041 chr2R 19375509 19375607 + 56 NA intron (FBgn0264339, intron 13 of 13) protein_coding-intron (FBgn0264339, intron 13 of 13) -10558 FBgn0264337 FBgn0264337 FBtr0331988 CR43793 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4058 chr3L 13771321 13771425 + 56 NA exon (FBgn0264001, exon 4 of 14) protein_coding-exon (FBgn0264001, exon 4 of 14) 25127 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6115 chr3R 23557983 23558044 + 56 NA Intergenic Intergenic -4249 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1772 chr2L 22226496 22226649 + 56 NA exon (FBgn0042701, exon 1 of 1) pseudogene-exon (FBgn0042701, exon 1 of 1) 421 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5048 chr3R 7198206 7198390 + 56 NA promoter-TSS (FBgn0004595) protein_coding-promoter-TSS (FBgn0004595) -19445 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4778 chr3R 3004156 3004250 + 56 NA exon (FBgn0002306, exon 4 of 10) protein_coding-exon (FBgn0002306, exon 4 of 10) 8172 FBgn0037482 FBgn0037482 FBtr0081605 CG10055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2130 chr2R 4421728 4421796 + 56 NA Intergenic Intergenic -1963 FBgn0050361 FBgn0050361 FBtr0088756 mtt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6818 chrU 2656829 2656897 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6226 chr3R 24488827 24488886 + 56 NA Intergenic Intergenic -6099 FBgn0053346 FBgn0053346 FBtr0302527 CG33346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2101 chr2R 3921927 3922002 + 56 NA exon (FBgn0025360, exon 3 of 4) protein_coding-exon (FBgn0025360, exon 3 of 4) 3175 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6745 chrU 500919 500973 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6893 chrUextra 1032655 1032763 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5414 chr3R 12701604 12701658 + 56 NA intron (FBgn0263610, intron 3 of 7) ncRNA-intron (FBgn0263610, intron 2 of 6) -16501 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6629 chr4 763104 763160 + 56 NA exon (FBgn0005666, exon 20 of 41) protein_coding-exon (FBgn0005666, exon 20 of 41) 18102 FBgn0005666 FBgn0005666 FBtr0301341 bt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2014 chr2R 2080571 2080672 + 56 NA intron (FBgn0262867, intron 1 of 9) protein_coding-intron (FBgn0262867, intron 1 of 9) 2744 FBgn0011934 FBgn0011934 FBtr0085989 tRNA:N5:42Ad tRNA Nup98-S2-pascual-garcia2017_R1_peak_906 chr2L 14105308 14105366 + 56 NA exon (FBgn0028904, exon 2 of 3) protein_coding-exon (FBgn0028904, exon 2 of 3) 854 FBgn0028904 FBgn0028904 FBtr0080596 CG16879 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7152 chrX 12477201 12477260 + 56 NA promoter-TSS (FBgn0030400) protein_coding-promoter-TSS (FBgn0030400) -4 FBgn0030400 FBgn0030400 FBtr0273245 CG11138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5577 chr3R 14681028 14681082 + 56 NA Intergenic Intergenic -3535 FBgn0051226 FBgn0051226 FBtr0083676 CG31226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2617 chr2R 12094231 12094298 + 56 NA promoter-TSS (FBgn0034091) protein_coding-promoter-TSS (FBgn0034091) 947 FBgn0050237 FBgn0050237 FBtr0087198 tRNA:CR30237 tRNA Nup98-S2-pascual-garcia2017_R1_peak_377 chr2L 5580573 5580730 + 56 NA exon (FBgn0031722, exon 2 of 2) protein_coding-exon (FBgn0031722, exon 2 of 2) 465 FBgn0031722 FBgn0031722 FBtr0079120 CG14011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1874 chr2L 22891399 22891454 + 56 NA TTS (FBgn0250907) protein_coding-TTS (FBgn0250907) 16892 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5872 chr3R 19555930 19556171 + 56 NA exon (FBgn0065098, exon 1 of 1) ncRNA-exon (FBgn0065098, exon 1 of 1) 101 FBgn0065098 FBgn0065098 FBtr0091662 RNaseMRP:RNA ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2037 chr2R 2801873 2801939 + 56 NA intron (FBgn0050158, intron 5 of 7) protein_coding-intron (FBgn0050158, intron 5 of 7) -9045 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1768 chr2L 22221602 22221657 + 56 NA Intergenic Intergenic -4522 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4385 chr3L 19133540 19133707 + 56 NA TTS (FBgn0016797) protein_coding-TTS (FBgn0016797) -1548 FBgn0036851 FBgn0036851 FBtr0330092 CG14082 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3635 chr3L 6018258 6018352 + 56 NA exon (FBgn0052406, exon 6 of 7) protein_coding-exon (FBgn0052406, exon 6 of 7) 9406 FBgn0035661 FBgn0035661 FBtr0077068 CG10477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7252 chrX 18587257 18587328 + 56 NA promoter-TSS (FBgn0010383) protein_coding-promoter-TSS (FBgn0010383) -514 FBgn0010383 FBgn0010383 FBtr0074609 Cyp18a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_344 chr2L 5055108 5055174 + 56 NA promoter-TSS (FBgn0014857) protein_coding-promoter-TSS (FBgn0014857) 7 FBgn0014857 FBgn0014857 FBtr0333537 His3.3A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3415 chr3L 611718 611971 + 56 NA Intergenic Intergenic 4802 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5439 chr3R 13079765 13079825 + 56 NA Intergenic Intergenic -6197 FBgn0038494 FBgn0038494 FBtr0083411 beat-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1008 chr2L 14746035 14746092 + 56 NA promoter-TSS (FBgn0260955) protein_coding-promoter-TSS (FBgn0260955) -853 FBgn0260955 FBgn0260955 FBtr0301742 CG42587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6929 chrUextra 14206360 14206505 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6484 chr3R 27183181 27183238 + 56 NA exon (FBgn0085376, exon 9 of 17) protein_coding-exon (FBgn0085376, exon 9 of 17) -14940 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1830 chr2L 22597148 22597208 + 56 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 47349 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4520 chr3L 24004085 24004144 + 56 NA exon (FBgn0058053, exon 2 of 2) protein_coding-exon (FBgn0058053, exon 2 of 2) 349 FBgn0058053 FBgn0058053 FBtr0111154 CG40053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1218 chr2L 16980350 16980409 + 56 NA intron (FBgn0053179, intron 2 of 6) protein_coding-intron (FBgn0053179, intron 2 of 6) -4599 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_850 chr2L 13038839 13038923 + 56 NA intron (FBgn0262160, intron 2 of 6) protein_coding-intron (FBgn0262160, intron 2 of 6) -17574 FBgn0028965 FBgn0028965 FBtr0080427 A16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1776 chr2L 22262839 22262919 + 56 NA Intergenic Intergenic 13001 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_360 chr2L 5403573 5403931 + 56 NA promoter-TSS (FBgn0016660) protein_coding-promoter-TSS (FBgn0016660) -590 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_784 chr2L 12341840 12341922 + 56 NA Intergenic Intergenic 2385 FBgn0264361 FBgn0264361 FBtr0332235 CG43813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5101 chr3R 8143723 8143788 + 56 NA Intergenic Intergenic 4601 FBgn0051432 FBgn0051432 FBtr0082616 tRNA:CR31432 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4331 chr3L 18012888 18012957 + 56 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -16744 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6288 chr3R 25170391 25170465 + 56 NA Intergenic Intergenic -25092 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1217 chr2L 16968972 16969185 + 56 NA Intergenic Intergenic -4013 FBgn0053179 FBgn0053179 FBtr0329973 beat-IIIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3181 chr2RHet 528257 528330 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_440 chr2L 6787807 6787862 + 56 NA promoter-TSS (FBgn0015776) protein_coding-promoter-TSS (FBgn0015776) -973 FBgn0015776 FBgn0015776 FBtr0332370 nrv1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3323 chr2RHet 1992264 1992381 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4881 chr3R 4468081 4468180 + 56 NA promoter-TSS (FBgn0012028) tRNA-promoter-TSS (FBgn0012028) 17 FBgn0012028 FBgn0012028 FBtr0081895 tRNA:Y1:85Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_4653 chr3R 1317632 1317689 + 56 NA exon (FBgn0051547, exon 5 of 10) protein_coding-exon (FBgn0051547, exon 5 of 10) 6406 FBgn0051550 FBgn0051550 FBtr0078685 CG31550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6132 chr3R 23657895 23657976 + 56 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -12876 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7107 chrX 8544862 8545072 + 56 NA promoter-TSS (FBgn0004102) protein_coding-promoter-TSS (FBgn0004102) -253 FBgn0004102 FBgn0004102 FBtr0331305 oc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4156 chr3L 15443195 15443292 + 56 NA Intergenic Intergenic 12942 FBgn0263616 FBgn0263616 FBtr0309981 CR43625 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_395 chr2L 5813086 5813163 + 56 NA Intergenic Intergenic 1550 FBgn0262999 FBgn0262999 FBtr0306842 CG43307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_53 chr2L 936348 936410 + 56 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 13586 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3880 chr3L 10692811 10692871 + 56 NA Intergenic Intergenic -2864 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2403 chr2R 8665956 8666018 + 56 NA Intergenic Intergenic -2062 FBgn0003326 FBgn0003326 FBtr0087855 sca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4396 chr3L 19672181 19672264 + 56 NA Intergenic Intergenic 8231 FBgn0036900 FBgn0036900 FBtr0331859 CG8765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1889 chr2L 22931095 22931149 + 56 NA Intergenic Intergenic -12562 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4546 chr3LHet 296915 297006 + 56 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7270 chrX 21152302 21152375 + 55 NA promoter-TSS (FBgn0052521) protein_coding-promoter-TSS (FBgn0052521) -158 FBgn0052521 FBgn0052521 FBtr0310654 CG32521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4926 chr3R 5156866 5156933 + 55 NA promoter-TSS (FBgn0037677) protein_coding-promoter-TSS (FBgn0037677) 718 FBgn0037678 FBgn0037678 FBtr0082057 CG16749 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2236 chr2R 5975018 5975102 + 55 NA promoter-TSS (FBgn0033484) protein_coding-promoter-TSS (FBgn0033484) -492 FBgn0028560 FBgn0028560 FBtr0089674 sut4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7121 chrX 9478620 9478688 + 55 NA Intergenic Intergenic -1269 FBgn0001186 FBgn0001186 FBtr0071362 Hex-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1174 chr2L 16407339 16407393 + 55 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) 10518 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3170 chr2RHet 443134 443188 + 55 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7228 chrX 17143532 17143588 + 55 NA promoter-TSS (FBgn0030834) protein_coding-promoter-TSS (FBgn0030834) 15 FBgn0030834 FBgn0030834 FBtr0074446 CG8675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_441 chr2L 6797561 6797657 + 55 NA promoter-TSS (FBgn0015777) protein_coding-promoter-TSS (FBgn0015777) 585 FBgn0015777 FBgn0015777 FBtr0100381 nrv2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3624 chr3L 5887485 5887551 + 55 NA Intergenic Intergenic 3017 FBgn0035644 FBgn0035644 FBtr0077081 Pole2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2072 chr2R 3418419 3418498 + 55 NA intron (FBgn0033188, intron 1 of 2) protein_coding-intron (FBgn0033188, intron 1 of 2) -1692 FBgn0033188 FBgn0033188 FBtr0088958 CG1600 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1283 chr2L 17531206 17531291 + 55 NA exon (FBgn0032649, exon 3 of 3) protein_coding-exon (FBgn0032649, exon 3 of 3) 986 FBgn0032649 FBgn0032649 FBtr0080991 CG15145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3087 chr2R 20230108 20230255 + 55 NA promoter-TSS (FBgn0004101) protein_coding-promoter-TSS (FBgn0004101) -208 FBgn0004101 FBgn0004101 FBtr0072271 bs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6968 chrUextra 28499141 28499196 + 55 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3423 chr3L 619758 619868 + 55 NA TTS (FBgn0263042) protein_coding-TTS (FBgn0263042) 2503 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4930 chr3R 5503585 5503655 + 55 NA promoter-TSS (FBgn0037728) protein_coding-promoter-TSS (FBgn0037728) -29 FBgn0037728 FBgn0037728 FBtr0308353 CG16817 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4241 chr3L 16831571 16831636 + 55 NA Intergenic Intergenic -3791 FBgn0036666 FBgn0036666 FBtr0075329 TSG101 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6934 chrUextra 16632206 16632268 + 55 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5231 chr3R 10217097 10217228 + 55 NA TTS (FBgn0086901) protein_coding-TTS (FBgn0086901) 5003 FBgn0262327 FBgn0262327 FBtr0304502 mir-2281 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_740 chr2L 11537298 11537381 + 54 NA TTS (FBgn0263386) protein_coding-TTS (FBgn0263386) 1194 FBgn0263386 FBgn0263386 FBtr0309073 CG43438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6923 chrUextra 12442403 12442475 + 54 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1040 chr2L 15032000 15032123 + 54 NA promoter-TSS (FBgn0051832) protein_coding-promoter-TSS (FBgn0051832) -341 FBgn0051832 FBgn0051832 FBtr0080726 CG31832 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_930 chr2L 14319141 14319254 + 54 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -9232 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7106 chrX 8519006 8519116 + 54 NA Intergenic Intergenic -18726 FBgn0030054 FBgn0030054 FBtr0071228 Caf1-180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1961 chr2R 848251 848336 + 54 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 11121 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_760 chr2L 11817440 11817516 + 54 NA exon (FBgn0259225, exon 9 of 10) protein_coding-exon (FBgn0259225, exon 9 of 10) -3698 FBgn0032378 FBgn0032378 FBtr0080259 CycY protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2823 chr2R 15614629 15614722 + 54 NA promoter-TSS (FBgn0011850) tRNA-promoter-TSS (FBgn0011850) -18 FBgn0065076 FBgn0065076 FBtr0091934 snoRNA:185 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6481 chr3R 27171288 27171356 + 54 NA intron (FBgn0085376, intron 2 of 7) protein_coding-intron (FBgn0085376, intron 2 of 16) -26827 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_967 chr2L 14546016 14546079 + 54 NA Intergenic Intergenic 3028 FBgn0250844 FBgn0250844 FBtr0080662 CG4218 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6776 chrU 1588126 1588201 + 54 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1615 chr2L 21294634 21294721 + 54 NA exon (FBgn0264556, exon 1 of 4) protein_coding-exon (FBgn0264556, exon 1 of 4) -1637 FBgn0264556 FBgn0264556 FBtr0081511 Gr39a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4818 chr3R 3684994 3685050 + 54 NA exon (FBgn0037525, exon 14 of 15) protein_coding-exon (FBgn0037525, exon 14 of 15) 27433 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6249 chr3R 24604167 24604263 + 54 NA Intergenic Intergenic -11124 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5864 chr3R 19140190 19140244 + 54 NA promoter-TSS (FBgn0003118) protein_coding-promoter-TSS (FBgn0003118) -24306 FBgn0039071 FBgn0039071 FBtr0084382 CG4434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1004 chr2L 14733421 14733478 + 54 NA Intergenic Intergenic -2394 FBgn0051835 FBgn0051835 FBtr0080667 CG31835 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1751 chr2L 22092303 22092363 + 54 NA Intergenic Intergenic 12068 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1181 chr2L 16469089 16469215 + 54 NA exon (FBgn0005677, exon 8 of 11) protein_coding-exon (FBgn0005677, exon 8 of 11) 16832 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2601 chr2R 11739012 11739084 + 54 NA intron (FBgn0034046, intron 1 of 4) protein_coding-intron (FBgn0034046, intron 1 of 4) 2937 FBgn0034046 FBgn0034046 FBtr0087287 tun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5891 chr3R 20012026 20012087 + 54 NA promoter-TSS (FBgn0029503) protein_coding-promoter-TSS (FBgn0029503) -31 FBgn0029503 FBgn0029503 FBtr0084554 CHORD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4148 chr3L 15375748 15375807 + 54 NA Intergenic Intergenic -25155 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4162 chr3L 15663848 15663928 + 54 NA Intergenic Intergenic 8921 FBgn0262528 FBgn0262528 FBtr0304968 CG43082 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5798 chr3R 17536586 17536640 + 54 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) 8767 FBgn0051176 FBgn0051176 FBtr0084114 CG31176 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1049 chr2L 15149254 15149332 + 54 NA Intergenic Intergenic -16904 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_5771 chr3R 17010603 17010697 + 54 NA intron (FBgn0264357, intron 1 of 8) protein_coding-intron (FBgn0264357, intron 6 of 12) -16723 FBgn0260004 FBgn0260004 FBtr0084027 Snmp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4368 chr3L 18724341 18724428 + 54 NA Intergenic Intergenic 7477 FBgn0264717 FBgn0264717 FBtr0334051 CR43985 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6692 chrU 80449 80542 + 54 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2093 chr2R 3911883 3911971 + 54 NA Intergenic Intergenic 5506 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6533 chr3R 27831506 27831560 + 54 NA Intergenic Intergenic 18962 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2087 chr2R 3885470 3885539 + 54 NA exon (FBgn0027788, exon 1 of 3) protein_coding-exon (FBgn0027788, exon 1 of 3) 574 FBgn0027788 FBgn0027788 FBtr0088869 Hey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3908 chr3L 11085444 11085514 + 54 NA promoter-TSS (FBgn0020412) protein_coding-promoter-TSS (FBgn0020412) 814 FBgn0020412 FBgn0020412 FBtr0076236 JIL-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5387 chr3R 12456777 12456907 + 54 NA intron (FBgn0262742, intron 3 of 13) protein_coding-intron (FBgn0262742, intron 2 of 12) 5882 FBgn0262742 FBgn0262742 FBtr0083333 Fas1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1812 chr2L 22527921 22528034 + 54 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 55495 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1504 chr2L 20085374 20085435 + 54 NA promoter-TSS (FBgn0263773) protein_coding-promoter-TSS (FBgn0263773) -5208 FBgn0263773 FBgn0263773 FBtr0310558 fok protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6252 chr3R 24607352 24607451 + 54 NA Intergenic Intergenic -7938 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6243 chr3R 24597780 24597856 + 54 NA Intergenic Intergenic -13862 FBgn0039598 FBgn0039598 FBtr0085313 CG14061 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7200 chrX 14734082 14734144 + 54 NA promoter-TSS (FBgn0052590) protein_coding-promoter-TSS (FBgn0052590) 706 FBgn0264078 FBgn0264078 FBtr0300435 Flo-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2565 chr2R 11119474 11119528 + 54 NA intron (FBgn0259878, intron 7 of 8) protein_coding-intron (FBgn0259878, intron 7 of 8) 9583 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2367 chr2R 7851954 7852008 + 54 NA exon (FBgn0033668, exon 9 of 9) protein_coding-exon (FBgn0033668, exon 9 of 9) 4372 FBgn0033669 FBgn0033669 FBtr0088053 PI31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3967 chr3L 12333504 12333630 + 54 NA exon (FBgn0036278, exon 6 of 6) protein_coding-exon (FBgn0036278, exon 6 of 6) 3791 FBgn0036277 FBgn0036277 FBtr0075954 CG10418 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5162 chr3R 9064705 9064769 + 54 NA intron (FBgn0000024, intron 6 of 10) protein_coding-intron (FBgn0000024, intron 5 of 9) -18437 FBgn0038127 FBgn0038127 FBtr0082781 CG8476 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2967 chr2R 18158154 18158233 + 54 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -232 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7251 chrX 18551305 18551378 + 54 NA promoter-TSS (FBgn0001079) protein_coding-promoter-TSS (FBgn0001079) -74 FBgn0030946 FBgn0030946 FBtr0074613 CG6659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4459 chr3L 22782004 22782060 + 54 NA TTS (FBgn0027339) protein_coding-TTS (FBgn0027339) 493 FBgn0037191 FBgn0037191 FBtr0078534 CG14448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5543 chr3R 14238846 14238902 + 54 NA promoter-TSS (FBgn0051122) protein_coding-promoter-TSS (FBgn0051122) -1521 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5485 chr3R 13570634 13570737 + 54 NA intron (FBgn0038541, intron 5 of 5) protein_coding-intron (FBgn0038541, intron 4 of 4) 8352 FBgn0038541 FBgn0038541 FBtr0083512 TyrRII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1654 chr2L 21766026 21766100 + 54 NA exon (FBgn0051612, exon 3 of 4) protein_coding-exon (FBgn0051612, exon 3 of 4) 8053 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6146 chr3R 23825825 23825887 + 54 NA Intergenic Intergenic -9383 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3318 chr2RHet 1989710 1989764 + 54 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5604 chr3R 15042087 15042154 + 54 NA TTS (FBgn0025680) protein_coding-TTS (FBgn0025680) 4205 FBgn0025680 FBgn0025680 FBtr0083736 cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6155 chr3R 23875827 23875997 + 54 NA exon (FBgn0085391, exon 2 of 9) protein_coding-exon (FBgn0085391, exon 2 of 9) 23578 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5008 chr3R 6694356 6694429 + 53 NA promoter-TSS (FBgn0037848) protein_coding-promoter-TSS (FBgn0037848) -43 FBgn0037848 FBgn0037848 FBtr0306640 Tsp86D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6452 chr3R 26890784 26890917 + 53 NA promoter-TSS (FBgn0024288) protein_coding-promoter-TSS (FBgn0024288) -229 FBgn0024288 FBgn0024288 FBtr0085735 Sox100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_306 chr2L 4439089 4439189 + 53 NA TTS (FBgn0262358) protein_coding-TTS (FBgn0262358) 1007 FBgn0031602 FBgn0031602 FBtr0331436 CG15431 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4432 chr3L 21311127 21311184 + 53 NA promoter-TSS (FBgn0003042) protein_coding-promoter-TSS (FBgn0003042) -35 FBgn0003042 FBgn0003042 FBtr0078405 Pc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5076 chr3R 7793365 7793471 + 53 NA promoter-TSS (FBgn0260743) protein_coding-promoter-TSS (FBgn0260743) -33 FBgn0260743 FBgn0260743 FBtr0082484 CG18347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7095 chrX 7827386 7827443 + 53 NA promoter-TSS (FBgn0004403) protein_coding-promoter-TSS (FBgn0004403) -30 FBgn0029980 FBgn0029980 FBtr0071131 CG10778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_335 chr2L 4821659 4821724 + 53 NA promoter-TSS (FBgn0031632) protein_coding-promoter-TSS (FBgn0031632) -85 FBgn0031632 FBgn0031632 FBtr0077384 CG15628 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4885 chr3R 4494829 4494920 + 53 NA promoter-TSS (FBgn0037607) protein_coding-promoter-TSS (FBgn0037607) 22 FBgn0012024 FBgn0012024 FBtr0081884 tRNA:Y1:85Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_995 chr2L 14665643 14665724 + 53 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 23642 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_567 chr2L 8775546 8775610 + 53 NA exon (FBgn0032068, exon 3 of 5) protein_coding-exon (FBgn0032068, exon 3 of 5) 679 FBgn0032068 FBgn0032068 FBtr0079742 CG9466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2959 chr2R 17990392 17990452 + 53 NA promoter-TSS (FBgn0034694) protein_coding-promoter-TSS (FBgn0034694) -271 FBgn0034694 FBgn0034694 FBtr0071758 CG6613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3535 chr3L 2955139 2955262 + 53 NA exon (FBgn0262593, exon 9 of 13) protein_coding-exon (FBgn0262593, exon 9 of 13) -3582 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2963 chr2R 18129733 18129792 + 53 NA Intergenic Intergenic -14038 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1127 chr2L 15911838 15912024 + 53 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) -4957 FBgn0032577 FBgn0032577 FBtr0080792 CG13244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4959 chr3R 5959327 5959390 + 53 NA intron (FBgn0004889, intron 1 of 4) protein_coding-intron (FBgn0004889, intron 2 of 4) 527 FBgn0004889 FBgn0004889 FBtr0082192 tws protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3082 chr2R 20193254 20193327 + 53 NA promoter-TSS (FBgn0003888) protein_coding-promoter-TSS (FBgn0003888) -115 FBgn0003888 FBgn0003888 FBtr0072270 betaTub60D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4363 chr3L 18611360 18611583 + 52 NA promoter-TSS (FBgn0052200) tRNA-promoter-TSS (FBgn0052200) -19 FBgn0052200 FBgn0052200 FBtr0075107 tRNA:CR32200 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6515 chr3R 27584075 27584143 + 52 NA promoter-TSS (FBgn0017448) protein_coding-promoter-TSS (FBgn0017448) -309 FBgn0017448 FBgn0017448 FBtr0303376 CG2187 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4960 chr3R 5970318 5970499 + 52 NA promoter-TSS (FBgn0086359) protein_coding-promoter-TSS (FBgn0086359) -13 FBgn0086359 FBgn0086359 FBtr0082181 Invadolysin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_79 chr2L 1142776 1142839 + 52 NA promoter-TSS (FBgn0031307) protein_coding-promoter-TSS (FBgn0031307) -394 FBgn0031307 FBgn0031307 FBtr0077958 MFS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3612 chr3L 5633134 5633223 + 52 NA intron (FBgn0035625, intron 1 of 5) protein_coding-intron (FBgn0035625, intron 1 of 4) -3569 FBgn0035625 FBgn0035625 FBtr0331809 Blimp-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3619 chr3L 5790517 5790600 + 52 NA promoter-TSS (FBgn0035638) protein_coding-promoter-TSS (FBgn0035638) -915 FBgn0035638 FBgn0035638 FBtr0077115 Tektin-C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3675 chr3L 6735481 6735580 + 52 NA intron (FBgn0261934, intron 1 of 9) protein_coding-intron (FBgn0261934, intron 1 of 4) 734 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_246 chr2L 3690878 3690937 + 52 NA exon (FBgn0085369, exon 8 of 8) protein_coding-exon (FBgn0085369, exon 8 of 8) 1681 FBgn0031558 FBgn0031558 FBtr0077550 CG16704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1760 chr2L 22196354 22196410 + 52 NA exon (FBgn0259683, exon 5 of 7) protein_coding-exon (FBgn0259683, exon 5 of 7) 17883 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_105 chr2L 1386545 1386642 + 52 NA intron (FBgn0002543, intron 12 of 13) protein_coding-intron (FBgn0002543, intron 12 of 13) 18504 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_519 chr2L 8541543 8541644 + 52 NA promoter-TSS (FBgn0051603) tRNA-promoter-TSS (FBgn0051603) 30 FBgn0051604 FBgn0051604 FBtr0079694 tRNA:CR31604 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3820 chr3L 9127598 9127687 + 52 NA promoter-TSS (FBgn0035964) protein_coding-promoter-TSS (FBgn0035964) -18 FBgn0035964 FBgn0035964 FBtr0100531 Dhpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6070 chr3R 23114218 23114279 + 52 NA promoter-TSS (FBgn0015737) protein_coding-promoter-TSS (FBgn0015737) -31 FBgn0039509 FBgn0039509 FBtr0085173 bigmax protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2711 chr2R 13614345 13614409 + 52 NA promoter-TSS (FBgn0034266) protein_coding-promoter-TSS (FBgn0034266) -66 FBgn0034266 FBgn0034266 FBtr0086861 CG4975 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_402 chr2L 5907037 5907125 + 52 NA promoter-TSS (FBgn0043362) protein_coding-promoter-TSS (FBgn0043362) -88 FBgn0043362 FBgn0043362 FBtr0079144 bchs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1871 chr2L 22868281 22868340 + 52 NA Intergenic Intergenic -6224 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_490 chr2L 7946911 7946965 + 52 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) 30127 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3403 chr3L 292295 292352 + 52 NA promoter-TSS (FBgn0264707) protein_coding-promoter-TSS (FBgn0264707) 14886 FBgn0264707 FBgn0264707 FBtr0333957 RhoGEF3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6281 chr3R 25093858 25093921 + 52 NA Intergenic Intergenic -12387 FBgn0003525 FBgn0003525 FBtr0085397 stg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2628 chr2R 12159463 12159527 + 51 NA promoter-TSS (FBgn0053017) protein_coding-promoter-TSS (FBgn0053017) -12 FBgn0001308 FBgn0001308 FBtr0087184 Khc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5728 chr3R 16383415 16383506 + 51 NA promoter-TSS (FBgn0043457) protein_coding-promoter-TSS (FBgn0043457) -57 FBgn0067783 FBgn0067783 FBtr0089481 att-ORFA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4884 chr3R 4494360 4494414 + 51 NA promoter-TSS (FBgn0037607) protein_coding-promoter-TSS (FBgn0037607) 40 FBgn0012025 FBgn0012025 FBtr0081885 tRNA:Y1:85Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_293 chr2L 4394186 4394240 + 51 NA promoter-TSS (FBgn0022153) protein_coding-promoter-TSS (FBgn0022153) 17 FBgn0022153 FBgn0022153 FBtr0331448 l(2)k05819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4602 chr3R 574759 574823 + 51 NA promoter-TSS (FBgn0026620) protein_coding-promoter-TSS (FBgn0026620) -13 FBgn0026620 FBgn0026620 FBtr0089951 tacc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2670 chr2R 12744963 12745035 + 51 NA promoter-TSS (FBgn0263462) snoRNA-promoter-TSS (FBgn0263462) 81 FBgn0263462 FBgn0263462 FBtr0309761 snoRNA:Dek-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2357 chr2R 7744417 7744511 + 51 NA exon (FBgn0013756, exon 2 of 5) protein_coding-exon (FBgn0013756, exon 2 of 5) 4342 FBgn0013756 FBgn0013756 FBtr0088033 Mtor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3426 chr3L 621343 621398 + 51 NA exon (FBgn0263042, exon 2 of 2) protein_coding-exon (FBgn0263042, exon 2 of 2) 946 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4438 chr3L 21510215 21510280 + 51 NA promoter-TSS (FBgn0037093) protein_coding-promoter-TSS (FBgn0037093) -40 FBgn0037093 FBgn0037093 FBtr0332716 Cdk12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5858 chr3R 19047722 19047791 + 51 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) -73 FBgn0262975 FBgn0262975 FBtr0308227 cnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5795 chr3R 17486736 17486801 + 51 NA promoter-TSS (FBgn0011766) protein_coding-promoter-TSS (FBgn0011766) 1912 FBgn0038893 FBgn0038893 FBtr0084116 CG6353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4642 chr3R 1197482 1197539 + 51 NA promoter-TSS (FBgn0003275) protein_coding-promoter-TSS (FBgn0003275) -7 FBgn0003275 FBgn0003275 FBtr0078787 RpII18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7028 chrX 3301948 3302053 + 51 NA intron (FBgn0029657, intron 3 of 4) protein_coding-intron (FBgn0029657, intron 2 of 3) 19556 FBgn0052493 FBgn0052493 FBtr0070533 tRNA:CR32493 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7105 chrX 8502332 8502394 + 51 NA Intergenic Intergenic -2028 FBgn0030054 FBgn0030054 FBtr0071228 Caf1-180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1486 chr2L 19887614 19887716 + 50 NA intron (FBgn0263873, intron 3 of 15) protein_coding-intron (FBgn0263873, intron 4 of 15) 4885 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2256 chr2R 6244113 6244203 + 50 NA promoter-TSS (FBgn0033512) protein_coding-promoter-TSS (FBgn0033512) 147 FBgn0261686 FBgn0261686 FBtr0303086 CG42733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1036 chr2L 14995537 14995604 + 50 NA intron (FBgn0086711, intron 1 of 5) protein_coding-intron (FBgn0086711, intron 1 of 7) 1989 FBgn0086711 FBgn0086711 FBtr0332521 mol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1892 chr2L 22971449 22971516 + 50 NA Intergenic Intergenic 9745 FBgn0262887 FBgn0262887 FBtr0306299 CR43242 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1803 chr2L 22483331 22483386 + 50 NA Intergenic Intergenic 10876 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3696 chr3L 6941138 6941192 + 50 NA exon (FBgn0035719, exon 5 of 6) protein_coding-exon (FBgn0035719, exon 5 of 6) 5209 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6557 chr3RHet 789874 789930 + 50 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3694 chr3L 6940424 6940574 + 50 NA exon (FBgn0035719, exon 4 of 6) protein_coding-exon (FBgn0035719, exon 4 of 6) 4543 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3362 chr2RHet 2264421 2264546 + 50 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3565 chr3L 3893093 3893226 + 50 NA exon (FBgn0083987, exon 1 of 1) snRNA-exon (FBgn0083987, exon 1 of 1) 171 FBgn0083987 FBgn0083987 FBtr0111039 snRNA:U11 snRNA Nup98-S2-pascual-garcia2017_R1_peak_4437 chr3L 21490561 21490615 + 50 NA promoter-TSS (FBgn0015239) protein_coding-promoter-TSS (FBgn0015239) -49 FBgn0264554 FBgn0264554 FBtr0333297 CG43933 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2873 chr2R 16361321 16361393 + 50 NA exon (FBgn0086604, exon 19 of 21) protein_coding-exon (FBgn0086604, exon 19 of 21) -29763 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7192 chrX 13716366 13716445 + 50 NA promoter-TSS (FBgn0027537) protein_coding-promoter-TSS (FBgn0027537) -454 FBgn0027537 FBgn0027537 FBtr0331714 CG11092 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3704 chr3L 6982623 6982699 + 50 NA Intergenic Intergenic -1061 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5059 chr3R 7445614 7445679 + 50 NA promoter-TSS (FBgn0051363) protein_coding-promoter-TSS (FBgn0051363) -168 FBgn0037920 FBgn0037920 FBtr0299566 CG14710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6348 chr3R 25529920 25529984 + 50 NA Intergenic Intergenic -10309 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2351 chr2R 7707594 7707648 + 50 NA Intergenic Intergenic -5249 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_503 chr2L 8290709 8290802 + 50 NA promoter-TSS (FBgn0011902) tRNA-promoter-TSS (FBgn0011902) 28 FBgn0011902 FBgn0011902 FBtr0079596 tRNA:K5:29A tRNA Nup98-S2-pascual-garcia2017_R1_peak_6033 chr3R 22522452 22522519 + 50 NA TTS (FBgn0023179) protein_coding-TTS (FBgn0023179) -3240 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_853 chr2L 13137138 13137199 + 49 NA Intergenic Intergenic 5734 FBgn0032472 FBgn0032472 FBtr0080496 CG9928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_484 chr2L 7782833 7782894 + 49 NA promoter-TSS (FBgn0031947) protein_coding-promoter-TSS (FBgn0031947) 6 FBgn0031947 FBgn0031947 FBtr0079488 CG7154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5895 chr3R 20185881 20185962 + 49 NA promoter-TSS (FBgn0039189) protein_coding-promoter-TSS (FBgn0039189) -73 FBgn0039189 FBgn0039189 FBtr0084628 CG18528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5658 chr3R 15696596 15696705 + 49 NA exon (FBgn0038740, exon 7 of 9) protein_coding-exon (FBgn0038740, exon 7 of 9) 4291 FBgn0038740 FBgn0038740 FBtr0113250 CG4562 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7275 chrX 21237800 21237864 + 49 NA intron (FBgn0024251, intron 2 of 4) protein_coding-intron (FBgn0024182, intron 2 of 4) -1809 FBgn0024251 FBgn0024251 FBtr0331744 bbx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3399 chr3L 212639 212715 + 49 NA promoter-TSS (FBgn0035111) protein_coding-promoter-TSS (FBgn0035111) 10 FBgn0035110 FBgn0035110 FBtr0072527 thoc7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4531 chr3L 24119826 24119931 + 49 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 52549 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_557 chr2L 8743153 8743208 + 49 NA Intergenic Intergenic -2520 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2733 chr2R 14039253 14039310 + 49 NA promoter-TSS (FBgn0000057) protein_coding-promoter-TSS (FBgn0000057) 72 FBgn0000057 FBgn0000057 FBtr0086744 adp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6523 chr3R 27662677 27662734 + 49 NA exon (FBgn0039883, exon 8 of 8) protein_coding-exon (FBgn0039883, exon 8 of 8) 11139 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4442 chr3L 21633974 21634058 + 49 NA promoter-TSS (FBgn0052446) protein_coding-promoter-TSS (FBgn0052446) -79 FBgn0052446 FBgn0052446 FBtr0330117 Atox1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2767 chr2R 14548079 14548137 + 49 NA promoter-TSS (FBgn0034372) protein_coding-promoter-TSS (FBgn0034372) 169 FBgn0259202 FBgn0259202 FBtr0299689 CG42306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7129 chrX 9672653 9672722 + 49 NA promoter-TSS (FBgn0030151) protein_coding-promoter-TSS (FBgn0030151) -1533 FBgn0030151 FBgn0030151 FBtr0089386 CG1354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3960 chr3L 12260564 12260626 + 49 NA promoter-TSS (FBgn0052100) protein_coding-promoter-TSS (FBgn0052100) -33 FBgn0052100 FBgn0052100 FBtr0076006 CG32100 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2490 chr2R 9733805 9733909 + 49 NA promoter-TSS (FBgn0033876) protein_coding-promoter-TSS (FBgn0033876) -41 FBgn0050484 FBgn0050484 FBtr0331382 CG30484 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3721 chr3L 7243592 7243650 + 49 NA promoter-TSS (FBgn0035754) protein_coding-promoter-TSS (FBgn0035754) 6 FBgn0035754 FBgn0035754 FBtr0076889 MED4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_938 chr2L 14362019 14362079 + 49 NA promoter-TSS (FBgn0015546) protein_coding-promoter-TSS (FBgn0015546) -20 FBgn0015546 FBgn0015546 FBtr0080630 spel1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3729 chr3L 7362913 7362968 + 49 NA promoter-TSS (FBgn0082598) protein_coding-promoter-TSS (FBgn0082598) -580 FBgn0035772 FBgn0035772 FBtr0302546 Sh3beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4191 chr3L 16030444 16030499 + 49 NA TTS (FBgn0036560) protein_coding-TTS (FBgn0036560) 1693 FBgn0036560 FBgn0036560 FBtr0333614 CG5895 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_109 chr2L 1406297 1406374 + 49 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 14114 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5180 chr3R 9371206 9371260 + 48 NA promoter-TSS (FBgn0051337) protein_coding-promoter-TSS (FBgn0051337) -127 FBgn0051337 FBgn0051337 FBtr0082790 CG31337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4244 chr3L 16858327 16858384 + 48 NA promoter-TSS (FBgn0261565) protein_coding-promoter-TSS (FBgn0261565) 2091 FBgn0036671 FBgn0036671 FBtr0075337 CG9951 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4181 chr3L 16011324 16011378 + 48 NA promoter-TSS (FBgn0264601) protein_coding-promoter-TSS (FBgn0264601) 66 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5817 chr3R 17984940 17985018 + 48 NA intron (FBgn0051163, intron 3 of 18) protein_coding-intron (FBgn0051163, intron 3 of 18) 25422 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1491 chr2L 19935264 19935328 + 48 NA promoter-TSS (FBgn0263873) protein_coding-promoter-TSS (FBgn0263873) 12295 FBgn0264375 FBgn0264375 FBtr0332241 CR43827 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2694 chr2R 13357055 13357141 + 48 NA promoter-TSS (FBgn0022987) protein_coding-promoter-TSS (FBgn0022987) -31 FBgn0022987 FBgn0022987 FBtr0086925 qkr54B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3207 chr2RHet 787517 787609 + 48 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_528 chr2L 8577439 8577547 + 48 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 6605 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6954 chrUextra 25124677 25124731 + 48 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1083 chr2L 15437127 15437181 + 48 NA Intergenic Intergenic 3792 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6874 chrUextra 207715 207774 + 48 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7051 chrX 4833117 4833177 + 48 NA promoter-TSS (FBgn0004368) protein_coding-promoter-TSS (FBgn0004368) -18 FBgn0004368 FBgn0004368 FBtr0301794 Ptp4E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_447 chr2L 6852271 6852328 + 48 NA promoter-TSS (FBgn0017551) protein_coding-promoter-TSS (FBgn0017551) -25 FBgn0017551 FBgn0017551 FBtr0079342 Rca1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4441 chr3L 21625817 21625880 + 48 NA exon (FBgn0037109, exon 3 of 4) protein_coding-exon (FBgn0037109, exon 3 of 4) 1698 FBgn0037109 FBgn0037109 FBtr0302592 MED1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_945 chr2L 14424565 14424637 + 48 NA exon (FBgn0028871, exon 2 of 2) protein_coding-exon (FBgn0028871, exon 2 of 2) 530 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4671 chr3R 1673215 1673343 + 48 NA TTS (FBgn0037387) protein_coding-TTS (FBgn0037387) 337 FBgn0037388 FBgn0037388 FBtr0078645 CG14676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6812 chrU 2474298 2474360 + 48 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_342 chr2L 5029401 5029462 + 48 NA promoter-TSS (FBgn0000299) protein_coding-promoter-TSS (FBgn0000299) -178 FBgn0000299 FBgn0000299 FBtr0079001 Cg25C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_200 chr2L 2857100 2857207 + 48 NA promoter-TSS (FBgn0031474) protein_coding-promoter-TSS (FBgn0031474) 1083 FBgn0015521 FBgn0015521 FBtr0273293 RpS21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3482 chr3L 1665047 1665129 + 48 NA promoter-TSS (FBgn0035254) protein_coding-promoter-TSS (FBgn0035254) -24 FBgn0035253 FBgn0035253 FBtr0072808 CG7971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6856 chrU 7638486 7638543 + 47 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6334 chr3R 25509148 25509218 + 47 NA exon (FBgn0013972, exon 2 of 5) protein_coding-exon (FBgn0013972, exon 2 of 5) 958 FBgn0013972 FBgn0013972 FBtr0085453 Gycalpha99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4170 chr3L 15828469 15828557 + 47 NA promoter-TSS (FBgn0036537) protein_coding-promoter-TSS (FBgn0036537) -25 FBgn0036537 FBgn0036537 FBtr0332134 CG18081 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2344 chr2R 7599605 7599674 + 47 NA promoter-TSS (FBgn0033649) protein_coding-promoter-TSS (FBgn0033649) -128 FBgn0033649 FBgn0033649 FBtr0113070 pyr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7089 chrX 7199794 7199883 + 47 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -2136 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6358 chr3R 25541861 25541944 + 47 NA promoter-TSS (FBgn0250832) protein_coding-promoter-TSS (FBgn0250832) 716 FBgn0039685 FBgn0039685 FBtr0085462 Obp99b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5937 chr3R 21706527 21706604 + 47 NA intron (FBgn0027865, intron 1 of 4) protein_coding-intron (FBgn0027865, intron 1 of 4) 597 FBgn0027865 FBgn0027865 FBtr0330163 Tsp96F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4407 chr3L 20196450 20196504 + 47 NA TTS (FBgn0036949) protein_coding-TTS (FBgn0036949) 310 FBgn0036948 FBgn0036948 FBtr0074859 CG7298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3584 chr3L 4413925 4414043 + 47 NA promoter-TSS (FBgn0035542) protein_coding-promoter-TSS (FBgn0035542) -373 FBgn0035542 FBgn0035542 FBtr0113141 DOR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3054 chr2R 19600937 19601030 + 47 NA promoter-TSS (FBgn0034897) protein_coding-promoter-TSS (FBgn0034897) -442 FBgn0034897 FBgn0034897 FBtr0113114 Sesn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_249 chr2L 3803972 3804026 + 47 NA intron (FBgn0021800, intron 1 of 3) protein_coding-intron (FBgn0021800, intron 1 of 3) -1700 FBgn0021800 FBgn0021800 FBtr0077498 l(2)k16918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2106 chr2R 3967513 3967574 + 47 NA promoter-TSS (FBgn0021814) protein_coding-promoter-TSS (FBgn0021814) 18 FBgn0021814 FBgn0021814 FBtr0088825 Vps28 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4722 chr3R 2485797 2485870 + 47 NA promoter-TSS (FBgn0024912) protein_coding-promoter-TSS (FBgn0024912) -11 FBgn0024912 FBgn0024912 FBtr0081697 agt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_919 chr2L 14288048 14288112 + 47 NA intron (FBgn0261563, intron 3 of 12) protein_coding-intron (FBgn0261563, intron 3 of 15) -3121 FBgn0263648 FBgn0263648 FBtr0310012 CR43639 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7208 chrX 15891002 15891090 + 47 NA promoter-TSS (FBgn0030720) protein_coding-promoter-TSS (FBgn0030720) -3 FBgn0030720 FBgn0030720 FBtr0074138 CG8939 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6624 chr4 718185 718312 + 47 NA promoter-TSS (FBgn0005558) protein_coding-promoter-TSS (FBgn0005558) -1573 FBgn0026199 FBgn0026199 FBtr0089092 myo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2433 chr2R 9045835 9045909 + 47 NA promoter-TSS (FBgn0020370) protein_coding-promoter-TSS (FBgn0020370) -63 FBgn0020370 FBgn0020370 FBtr0087775 TppII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1844 chr2L 22655532 22655593 + 47 NA Intergenic Intergenic -6481 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1404 chr2L 18974255 18974371 + 47 NA promoter-TSS (FBgn0032730) protein_coding-promoter-TSS (FBgn0032730) 135 FBgn0032729 FBgn0032729 FBtr0081186 CG10639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_916 chr2L 14263043 14263108 + 47 NA promoter-TSS (FBgn0261563) protein_coding-promoter-TSS (FBgn0261563) 48 FBgn0261563 FBgn0261563 FBtr0302735 wb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6338 chr3R 25516195 25516252 + 47 NA Intergenic Intergenic -1190 FBgn0039682 FBgn0039682 FBtr0085463 Obp99c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2391 chr2R 8318590 8318652 + 47 NA promoter-TSS (FBgn0033737) protein_coding-promoter-TSS (FBgn0033737) -21 FBgn0033737 FBgn0033737 FBtr0087952 Nup54 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1358 chr2L 18228983 18229037 + 46 NA intron (FBgn0261804, intron 3 of 14) protein_coding-intron (FBgn0261804, intron 3 of 14) -19773 FBgn0051802 FBgn0051802 FBtr0081058 CG31802 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5210 chr3R 9779307 9779361 + 46 NA Intergenic Intergenic -2474 FBgn0038190 FBgn0038190 FBtr0082877 CG9926 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6165 chr3R 23972430 23972544 + 46 NA promoter-TSS (FBgn0085383) protein_coding-promoter-TSS (FBgn0085383) -115 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2511 chr2R 10257990 10258075 + 46 NA promoter-TSS (FBgn0050073) protein_coding-promoter-TSS (FBgn0050073) 589 FBgn0050067 FBgn0050067 FBtr0087558 Obp50a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1330 chr2L 17955251 17955346 + 46 NA Intergenic Intergenic -8116 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3312 chr2RHet 1965887 1965957 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6606 chr4 527868 527955 + 46 NA intron (FBgn0004607, intron 2 of 12) protein_coding-intron (FBgn0004607, intron 2 of 13) 5475 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2293 chr2R 7022036 7022092 + 46 NA Intergenic Intergenic -1369 FBgn0033578 FBgn0033578 FBtr0088202 BBS4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2876 chr2R 16410428 16410482 + 46 NA Intergenic Intergenic -3377 FBgn0034511 FBgn0034511 FBtr0086214 CG13422 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2257 chr2R 6245254 6245309 + 46 NA promoter-TSS (FBgn0261686) protein_coding-promoter-TSS (FBgn0261686) -976 FBgn0261686 FBgn0261686 FBtr0303086 CG42733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6763 chrU 1233392 1233453 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_873 chr2L 13486932 13486986 + 46 NA intron (FBgn0263354, intron 2 of 6) protein_coding-intron (FBgn0263354, intron 4 of 8) 25185 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6218 chr3R 24399798 24399856 + 46 NA Intergenic Intergenic 11007 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2769 chr2R 14638321 14638393 + 46 NA exon (FBgn0053147, exon 7 of 9) protein_coding-exon (FBgn0053147, exon 7 of 9) -4143 FBgn0034387 FBgn0034387 FBtr0086609 Cyp12b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3244 chr2RHet 1454618 1454763 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6566 chr3RHet 1128795 1128850 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_786 chr2L 12349835 12349889 + 46 NA intron (FBgn0262475, intron 1 of 9) protein_coding-intron (FBgn0262475, intron 1 of 9) 1745 FBgn0262475 FBgn0262475 FBtr0304864 bru-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_994 chr2L 14655581 14655677 + 46 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 33696 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5621 chr3R 15276981 15277035 + 46 NA intron (FBgn0051221, intron 3 of 4) protein_coding-intron (FBgn0051221, intron 3 of 4) 11780 FBgn0038708 FBgn0038708 FBtr0083769 CG6255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6905 chrUextra 4762654 4762708 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4335 chr3L 18020723 18020801 + 46 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -12655 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1235 chr2L 17073694 17073753 + 46 NA Intergenic Intergenic -11927 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5755 chr3R 16768244 16768298 + 46 NA intron (FBgn0051191, intron 1 of 5) protein_coding-intron (FBgn0051191, intron 1 of 5) -6165 FBgn0002921 FBgn0002921 FBtr0089516 Atpalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2704 chr2R 13505403 13505457 + 46 NA intron (FBgn0034253, intron 2 of 8) protein_coding-intron (FBgn0034253, intron 2 of 8) 1169 FBgn0082922 FBgn0082922 FBtr0113512 snoRNA:Or-aca4 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3670 chr3L 6656350 6656419 + 46 NA TTS (FBgn0035709) protein_coding-TTS (FBgn0035709) 2357 FBgn0035709 FBgn0035709 FBtr0076963 eIF4E-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2723 chr2R 13861125 13861179 + 46 NA Intergenic Intergenic -17077 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5396 chr3R 12573505 12573559 + 46 NA intron (FBgn0020556, intron 1 of 2) ncRNA-intron (FBgn0020556, intron 2 of 2) -1424 FBgn0020556 FBgn0020556 FBtr0083344 bxd ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7178 chrX 13037449 13037514 + 46 NA intron (FBgn0052645, intron 1 of 5) protein_coding-intron (FBgn0052645, intron 1 of 5) 4242 FBgn0052645 FBgn0052645 FBtr0073725 CG32645 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_665 chr2L 10038752 10038812 + 46 NA exon (FBgn0027600, exon 6 of 6) protein_coding-exon (FBgn0027600, exon 6 of 6) 6088 FBgn0027600 FBgn0027600 FBtr0079934 obst-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4717 chr3R 2437588 2437655 + 46 NA Intergenic Intergenic -2985 FBgn0250846 FBgn0250846 FBtr0301286 glob2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4730 chr3R 2546707 2546792 + 46 NA intron (FBgn0051481, intron 2 of 7) protein_coding-intron (FBgn0051481, intron 3 of 8) 16945 FBgn0004783 FBgn0004783 FBtr0081691 Ccp84Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2194 chr2R 5239288 5239359 + 46 NA promoter-TSS (FBgn0033403) protein_coding-promoter-TSS (FBgn0033403) -163 FBgn0033403 FBgn0033403 FBtr0088558 CG13739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4942 chr3R 5737516 5737603 + 46 NA intron (FBgn0263097, intron 1 of 6) protein_coding-intron (FBgn0263097, intron 1 of 6) 37156 FBgn0263097 FBgn0263097 FBtr0114583 Glut4EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1015 chr2L 14797370 14797452 + 46 NA promoter-TSS (FBgn0028866) protein_coding-promoter-TSS (FBgn0028866) -874 FBgn0028866 FBgn0028866 FBtr0080687 CG18420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4128 chr3L 15014431 15014494 + 46 NA intron (FBgn0261090, intron 1 of 7) protein_coding-intron (FBgn0261090, intron 2 of 7) -2130 FBgn0047338 FBgn0047338 FBtr0075630 CG32148 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5305 chr3R 11590630 11590684 + 46 NA Intergenic Intergenic 1820 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1359 chr2L 18229994 18230078 + 46 NA intron (FBgn0261804, intron 3 of 14) protein_coding-intron (FBgn0261804, intron 3 of 14) -20799 FBgn0051802 FBgn0051802 FBtr0081058 CG31802 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6790 chrU 1972912 1973016 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1224 chr2L 17010758 17010812 + 46 NA TTS (FBgn0032624) protein_coding-TTS (FBgn0032624) 2269 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_543 chr2L 8645026 8645101 + 46 NA exon (FBgn0011259, exon 6 of 22) protein_coding-exon (FBgn0011259, exon 6 of 22) 25035 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1660 chr2L 21771478 21771621 + 46 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 12516 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_582 chr2L 8825225 8825303 + 46 NA promoter-TSS (FBgn0029123) protein_coding-promoter-TSS (FBgn0029123) -361 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6945 chrUextra 21967469 21967523 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5096 chr3R 8104817 8104871 + 46 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) -2030 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4123 chr3L 14916853 14916934 + 46 NA intron (FBgn0259099, intron 1 of 10) protein_coding-intron (FBgn0259099, intron 1 of 10) 19988 FBgn0259099 FBgn0259099 FBtr0330139 DCX-EMAP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6886 chrUextra 510986 511056 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4443 chr3L 21646056 21646110 + 46 NA intron (FBgn0264711, intron 2 of 7) protein_coding-intron (FBgn0264711, intron 2 of 7) -5239 FBgn0264711 FBgn0264711 FBtr0333974 CG43980 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3344 chr2RHet 2201186 2201316 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2544 chr2R 10740128 10740185 + 46 NA promoter-TSS (FBgn0028434) protein_coding-promoter-TSS (FBgn0028434) -1 FBgn0027783 FBgn0027783 FBtr0087461 SMC2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4486 chr3L 23604374 23604428 + 46 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 55376 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3502 chr3L 2013990 2014055 + 46 NA Intergenic Intergenic 7936 FBgn0259703 FBgn0259703 FBtr0299956 CG42357 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6505 chr3R 27470348 27470479 + 46 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) 22555 FBgn0039862 FBgn0039862 FBtr0330107 kek6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5768 chr3R 16955887 16955941 + 46 NA promoter-TSS (FBgn0038860) protein_coding-promoter-TSS (FBgn0038860) -27 FBgn0038860 FBgn0038860 FBtr0084015 Ice2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2799 chr2R 15165612 15165670 + 46 NA exon (FBgn0003254, exon 2 of 2) protein_coding-exon (FBgn0003254, exon 2 of 2) 2410 FBgn0003254 FBgn0003254 FBtr0330058 rib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6762 chrU 1226357 1226411 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6720 chrU 222789 222843 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6774 chrU 1397030 1397092 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1985 chr2R 1465686 1465775 + 46 NA Intergenic Intergenic 26603 FBgn0039969 FBgn0039969 FBtr0273211 Fis1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3795 chr3L 8735161 8735251 + 46 NA exon (FBgn0003149, exon 4 of 9) protein_coding-exon (FBgn0003149, exon 4 of 9) -3199 FBgn0003149 FBgn0003149 FBtr0306639 Prm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3135 chr2RHet 8827 8883 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2382 chr2R 8132023 8132083 + 46 NA exon (FBgn0262889, exon 1 of 2) protein_coding-exon (FBgn0262889, exon 1 of 2) 114 FBgn0262889 FBgn0262889 FBtr0306303 CG43244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4844 chr3R 4012198 4012268 + 46 NA Intergenic Intergenic -5069 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4559 chr3LHet 926664 926739 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3797 chr3L 8777564 8777622 + 46 NA intron (FBgn0261259, intron 5 of 18) protein_coding-intron (FBgn0261259, intron 3 of 16) 4052 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6280 chr3R 25073970 25074030 + 46 NA exon (FBgn0263236, exon 2 of 7) protein_coding-exon (FBgn0263236, exon 2 of 7) 544 FBgn0263236 FBgn0263236 FBtr0085400 SP1029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6612 chr4 552200 552276 + 46 NA exon (FBgn0004607, exon 9 of 14) protein_coding-exon (FBgn0004607, exon 9 of 14) 26242 FBgn0264618 FBgn0264618 FBtr0333707 CR43958 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3904 chr3L 10973177 10973231 + 46 NA Intergenic Intergenic 7456 FBgn0036112 FBgn0036112 FBtr0076194 CG14147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3531 chr3L 2888467 2888521 + 46 NA intron (FBgn0035379, intron 3 of 5) protein_coding-intron (FBgn0035379, intron 3 of 5) 3672 FBgn0035379 FBgn0035379 FBtr0073011 spz5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4141 chr3L 15254234 15254299 + 46 NA Intergenic Intergenic 25547 FBgn0029114 FBgn0029114 FBtr0075607 Tollo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6048 chr3R 22614124 22614185 + 46 NA Intergenic Intergenic 4094 FBgn0261861 FBgn0261861 FBtr0310470 CG42790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5924 chr3R 21381582 21381636 + 46 NA intron (FBgn0011666, intron 2 of 4) protein_coding-intron (FBgn0011666, intron 2 of 6) -20391 FBgn0011666 FBgn0011666 FBtr0084882 msi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2781 chr2R 14896631 14896710 + 46 NA TTS (FBgn0034412) protein_coding-TTS (FBgn0034412) 14469 FBgn0263473 FBgn0263473 FBtr0309772 snoRNA:abba-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3491 chr3L 1840962 1841053 + 46 NA exon (FBgn0035281, exon 3 of 3) protein_coding-exon (FBgn0035281, exon 3 of 3) 1077 FBgn0035281 FBgn0035281 FBtr0332673 Cpr62Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7244 chrX 18251881 18251960 + 46 NA promoter-TSS (FBgn0030914) protein_coding-promoter-TSS (FBgn0030914) -996 FBgn0030914 FBgn0030914 FBtr0074553 CG6106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4610 chr3R 678398 678487 + 46 NA promoter-TSS (FBgn0003002) protein_coding-promoter-TSS (FBgn0003002) -93 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5507 chr3R 13858072 13858126 + 46 NA Intergenic Intergenic 8670 FBgn0038565 FBgn0038565 FBtr0083540 CG7794 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6797 chrU 2300890 2300946 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3816 chr3L 9059492 9059549 + 46 NA promoter-TSS (FBgn0000116) protein_coding-promoter-TSS (FBgn0000116) 6311 FBgn0035959 FBgn0035959 FBtr0331549 CG4911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6493 chr3R 27297043 27297097 + 46 NA Intergenic Intergenic 8003 FBgn0039850 FBgn0039850 FBtr0085789 CG11333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1988 chr2R 1606309 1606363 + 46 NA intron (FBgn0000099, intron 1 of 7) protein_coding-intron (FBgn0000099, intron 1 of 7) -1782 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3653 chr3L 6238324 6238405 + 46 NA TTS (FBgn0035696) protein_coding-TTS (FBgn0035696) 482 FBgn0004513 FBgn0004513 FBtr0077011 Mdr65 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3973 chr3L 12444346 12444424 + 46 NA Intergenic Intergenic 16736 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1324 chr2L 17896956 17897010 + 46 NA Intergenic Intergenic 3171 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_868 chr2L 13460730 13460787 + 46 NA TTS (FBgn0261992) protein_coding-TTS (FBgn0261992) 985 FBgn0261992 FBgn0261992 FBtr0303821 CG42810 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1252 chr2L 17210235 17210325 + 46 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 28342 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6043 chr3R 22597201 22597269 + 46 NA Intergenic Intergenic 12695 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1796 chr2L 22391704 22391784 + 46 NA Intergenic Intergenic 36581 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4539 chr3L 24243646 24243727 + 46 NA intron (FBgn0011288, intron 5 of 6) protein_coding-intron (FBgn0011288, intron 5 of 7) -74281 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5298 chr3R 11544526 11544580 + 46 NA Intergenic Intergenic -2246 FBgn0051294 FBgn0051294 FBtr0083198 CG31294 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3308 chr2RHet 1953063 1953134 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5251 chr3R 10758575 10758636 + 46 NA Intergenic Intergenic 14203 FBgn0038279 FBgn0038279 FBtr0083004 CG3837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5069 chr3R 7602957 7603020 + 46 NA promoter-TSS (FBgn0086910) protein_coding-promoter-TSS (FBgn0086910) 1083 FBgn0086910 FBgn0086910 FBtr0082533 l(3)neo38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5402 chr3R 12600575 12600652 + 46 NA Intergenic Intergenic -8535 FBgn0085056 FBgn0085056 FBtr0113492 tre-1 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2673 chr2R 12871578 12871635 + 46 NA intron (FBgn0004580, intron 1 of 10) protein_coding-intron (FBgn0004580, intron 1 of 10) 10141 FBgn0004580 FBgn0004580 FBtr0087056 Cbp53E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_783 chr2L 12319778 12319868 + 46 NA Intergenic Intergenic -19025 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4267 chr3L 17173641 17173730 + 46 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 13722 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1104 chr2L 15601846 15601906 + 46 NA Intergenic Intergenic 10093 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1073 chr2L 15385998 15386052 + 46 NA Intergenic Intergenic -24398 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5943 chr3R 21750597 21750651 + 46 NA exon (FBgn0039396, exon 6 of 7) protein_coding-exon (FBgn0039396, exon 6 of 7) -2405 FBgn0039395 FBgn0039395 FBtr0084984 CG14546 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3661 chr3L 6377333 6377389 + 46 NA Intergenic Intergenic -16331 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4358 chr3L 18404386 18404470 + 46 NA Intergenic Intergenic -12893 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6414 chr3R 26503420 26503491 + 46 NA Intergenic Intergenic -12911 FBgn0039795 FBgn0039795 FBtr0085698 Spn100A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6990 chrX 1441675 1441729 + 46 NA intron (FBgn0025390, intron 7 of 7) protein_coding-intron (FBgn0025390, intron 7 of 7) 10731 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1469 chr2L 19728052 19728112 + 46 NA exon (FBgn0000464, exon 14 of 17) protein_coding-exon (FBgn0000464, exon 14 of 17) 7638 FBgn0032815 FBgn0032815 FBtr0331244 CG10462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2895 chr2R 16788024 16788112 + 46 NA intron (FBgn0015524, intron 2 of 7) protein_coding-intron (FBgn0015524, intron 2 of 7) 2832 FBgn0015524 FBgn0015524 FBtr0110772 otp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6262 chr3R 24760963 24761103 + 46 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 12267 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4527 chr3L 24117672 24117752 + 46 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 50383 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4218 chr3L 16477269 16477340 + 46 NA promoter-TSS (FBgn0004569) protein_coding-promoter-TSS (FBgn0004569) -554 FBgn0004569 FBgn0004569 FBtr0075408 aos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2806 chr2R 15412745 15412807 + 46 NA exon (FBgn0003435, exon 11 of 11) protein_coding-exon (FBgn0003435, exon 11 of 11) -11700 FBgn0034458 FBgn0034458 FBtr0086497 Ir56d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4777 chr3R 3003933 3003987 + 46 NA exon (FBgn0002306, exon 4 of 10) protein_coding-exon (FBgn0002306, exon 4 of 10) 8415 FBgn0037482 FBgn0037482 FBtr0081605 CG10055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5732 chr3R 16488134 16488188 + 46 NA Intergenic Intergenic -5599 FBgn0038818 FBgn0038818 FBtr0083937 Nep4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_636 chr2L 9546114 9546169 + 46 NA exon (FBgn0032127, exon 2 of 2) protein_coding-exon (FBgn0032127, exon 2 of 2) 330 FBgn0032127 FBgn0032127 FBtr0273329 CG13114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7021 chrX 2867757 2867812 + 46 NA promoter-TSS (FBgn0003285) protein_coding-promoter-TSS (FBgn0003285) 83 FBgn0003285 FBgn0003285 FBtr0070562 rst protein_coding Nup98-S2-pascual-garcia2017_R1_peak_375 chr2L 5554082 5554195 + 46 NA promoter-TSS (FBgn0004620) protein_coding-promoter-TSS (FBgn0004620) 241 FBgn0031721 FBgn0031721 FBtr0079104 CG14017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6430 chr3R 26741836 26741921 + 46 NA exon (FBgn0020912, exon 2 of 5) protein_coding-exon (FBgn0020912, exon 2 of 5) 3268 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_473 chr2L 7341079 7341151 + 46 NA intron (FBgn0031902, intron 1 of 3) protein_coding-intron (FBgn0031902, intron 1 of 3) 6314 FBgn0031902 FBgn0031902 FBtr0303251 Wnt6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3917 chr3L 11376239 11376293 + 46 NA TTS (FBgn0261813) protein_coding-TTS (FBgn0261813) 1057 FBgn0261813 FBgn0261813 FBtr0303299 CG42755 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7209 chrX 15985529 15985691 + 46 NA promoter-TSS (FBgn0028397) protein_coding-promoter-TSS (FBgn0028397) -4188 FBgn0028397 FBgn0028397 FBtr0310317 Tob protein_coding Nup98-S2-pascual-garcia2017_R1_peak_774 chr2L 12142599 12142677 + 46 NA promoter-TSS (FBgn0051760) protein_coding-promoter-TSS (FBgn0051760) -2411 FBgn0051760 FBgn0051760 FBtr0331997 CG31760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6577 chr3RHet 1779186 1779240 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3489 chr3L 1822605 1822747 + 46 NA TTS (FBgn0027790) protein_coding-TTS (FBgn0027790) 6266 FBgn0035279 FBgn0035279 FBtr0299561 Cpr62Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4691 chr3R 2038866 2038932 + 46 NA exon (FBgn0037410, exon 5 of 5) protein_coding-exon (FBgn0037410, exon 5 of 5) -2661 FBgn0037411 FBgn0037411 FBtr0078594 Osi3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5572 chr3R 14592085 14592139 + 46 NA intron (FBgn0038652, intron 3 of 9) protein_coding-intron (FBgn0038652, intron 4 of 10) -7517 FBgn0038651 FBgn0038651 FBtr0305051 CG14299 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_992 chr2L 14636632 14636688 + 46 NA intron (FBgn0003016, intron 1 of 9) protein_coding-intron (FBgn0003016, intron 2 of 10) 20391 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_575 chr2L 8798172 8798249 + 46 NA Intergenic Intergenic -11190 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1271 chr2L 17349257 17349392 + 46 NA Intergenic Intergenic 5344 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5198 chr3R 9623954 9624016 + 46 NA promoter-TSS (FBgn0051331) tRNA-promoter-TSS (FBgn0051331) 7 FBgn0051331 FBgn0051331 FBtr0082836 tRNA:CR31331 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1274 chr2L 17355675 17355732 + 46 NA Intergenic Intergenic -1035 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3718 chr3L 7158543 7158608 + 46 NA exon (FBgn0263218, exon 16 of 21) protein_coding-exon (FBgn0263218, exon 16 of 21) 7375 FBgn0040837 FBgn0040837 FBtr0273402 CG8620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5519 chr3R 13934329 13934439 + 46 NA promoter-TSS (FBgn0051242) tRNA-promoter-TSS (FBgn0051242) 25 FBgn0051242 FBgn0051242 FBtr0083544 tRNA:CR31242 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7197 chrX 14064859 14064913 + 46 NA TTS (FBgn0030538) protein_coding-TTS (FBgn0030538) 1258 FBgn0030537 FBgn0030537 FBtr0073868 CG12480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1749 chr2L 22084993 22085056 + 46 NA Intergenic Intergenic 5352 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5674 chr3R 15866730 15866806 + 46 NA intron (FBgn0040571, intron 2 of 2) protein_coding-intron (FBgn0040571, intron 2 of 2) -1711 FBgn0064119 FBgn0064119 FBtr0300808 CG33934 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6741 chrU 410197 410257 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1894 chr2L 22981397 22981456 + 46 NA Intergenic Intergenic 19689 FBgn0262887 FBgn0262887 FBtr0306299 CR43242 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_804 chr2L 12628615 12628669 + 46 NA TTS (FBgn0085424) protein_coding-TTS (FBgn0085424) 10294 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6441 chr3R 26806783 26806874 + 46 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) 8900 FBgn0051008 FBgn0051008 FBtr0085748 CG31008 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4377 chr3L 19033406 19033489 + 46 NA intron (FBgn0002945, intron 1 of 3) protein_coding-intron (FBgn0002945, intron 1 of 4) 5102 FBgn0002945 FBgn0002945 FBtr0332650 nkd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1792 chr2L 22348470 22348558 + 46 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -5841 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1162 chr2L 16221540 16221594 + 46 NA Intergenic Intergenic -4523 FBgn0264392 FBgn0264392 FBtr0332359 CR43840 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6393 chr3R 26074329 26074421 + 46 NA promoter-TSS (FBgn0051023) tRNA-promoter-TSS (FBgn0051023) 42 FBgn0051023 FBgn0051023 FBtr0085636 tRNA:CR31023 tRNA Nup98-S2-pascual-garcia2017_R1_peak_939 chr2L 14371035 14371150 + 46 NA Intergenic Intergenic 9023 FBgn0015546 FBgn0015546 FBtr0080630 spel1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3383 chr2RHet 2446960 2447021 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2172 chr2R 4907894 4907957 + 46 NA exon (FBgn0033365, exon 6 of 9) protein_coding-exon (FBgn0033365, exon 6 of 9) 2565 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_153 chr2L 1909865 1909943 + 46 NA exon (FBgn0031374, exon 2 of 19) protein_coding-exon (FBgn0031374, exon 2 of 19) 25282 FBgn0031374 FBgn0031374 FBtr0110882 CG7337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1247 chr2L 17191789 17191866 + 46 NA intron (FBgn0032629, intron 4 of 6) protein_coding-intron (FBgn0032629, intron 4 of 5) 9889 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3235 chr2RHet 1414645 1414699 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6443 chr3R 26810567 26810694 + 46 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) 5098 FBgn0051008 FBgn0051008 FBtr0085748 CG31008 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1927 chr2R 248930 248990 + 46 NA intron (FBgn0260798, intron 11 of 15) protein_coding-intron (FBgn0260798, intron 10 of 14) 109598 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3302 chr2RHet 1934849 1934903 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6232 chr3R 24566174 24566307 + 46 NA exon (FBgn0039595, exon 3 of 4) protein_coding-exon (FBgn0039595, exon 3 of 4) 4245 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1989 chr2R 1613307 1613369 + 46 NA exon (FBgn0000099, exon 1 of 8) protein_coding-exon (FBgn0000099, exon 1 of 8) -8784 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_135 chr2L 1602287 1602353 + 46 NA intron (FBgn0261509, intron 4 of 9) protein_coding-intron (FBgn0261509, intron 4 of 10) 8805 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6227 chr3R 24510374 24510428 + 46 NA intron (FBgn0039594, intron 1 of 10) protein_coding-intron (FBgn0039594, intron 1 of 9) 2338 FBgn0039594 FBgn0039594 FBtr0305087 CG9990 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3158 chr2RHet 238452 238520 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3322 chr2RHet 1991934 1991995 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5981 chr3R 22124745 22124804 + 46 NA Intergenic Intergenic 26223 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_219 chr2L 3331293 3331370 + 46 NA exon (FBgn0031522, exon 2 of 6) protein_coding-exon (FBgn0031522, exon 2 of 6) 401 FBgn0031522 FBgn0031522 FBtr0077586 CG3285 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2824 chr2R 15614992 15615053 + 46 NA promoter-TSS (FBgn0011849) tRNA-promoter-TSS (FBgn0011849) 14 FBgn0011849 FBgn0011849 FBtr0086447 tRNA:E4:56Fb tRNA Nup98-S2-pascual-garcia2017_R1_peak_5446 chr3R 13185004 13185068 + 46 NA intron (FBgn0038498, intron 1 of 6) protein_coding-intron (FBgn0038498, intron 1 of 6) 6803 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5517 chr3R 13915028 13915102 + 46 NA Intergenic Intergenic -1460 FBgn0003499 FBgn0003499 FBtr0301615 sr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3768 chr3L 8320766 8320840 + 46 NA promoter-TSS (FBgn0085491) protein_coding-promoter-TSS (FBgn0085491) -880 FBgn0085491 FBgn0085491 FBtr0112768 CG34462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2826 chr2R 15615722 15615786 + 46 NA promoter-TSS (FBgn0050220) tRNA-promoter-TSS (FBgn0050220) 10 FBgn0050454 FBgn0050454 FBtr0086445 tRNA:CR30454 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4548 chr3LHet 490410 490469 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1634 chr2L 21611897 21612032 + 46 NA Intergenic Intergenic 6810 FBgn0032955 FBgn0032955 FBtr0100511 CG2201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6391 chr3R 25979754 25979817 + 46 NA TTS (FBgn0039748) protein_coding-TTS (FBgn0039748) 2004 FBgn0039748 FBgn0039748 FBtr0085567 CG15529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5810 chr3R 17742511 17742566 + 46 NA Intergenic Intergenic 3067 FBgn0038919 FBgn0038919 FBtr0084150 CG17843 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1509 chr2L 20125390 20125488 + 46 NA Intergenic Intergenic 9484 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6703 chrU 134650 134735 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1493 chr2L 20003170 20003237 + 46 NA intron (FBgn0264443, intron 1 of 5) protein_coding-intron (FBgn0264443, intron 1 of 5) 14079 FBgn0264443 FBgn0264443 FBtr0332566 CG43861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2219 chr2R 5696223 5696281 + 46 NA Intergenic Intergenic -1882 FBgn0027589 FBgn0027589 FBtr0088495 CG1688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7253 chrX 18598092 18598154 + 46 NA Intergenic Intergenic -5775 FBgn0030949 FBgn0030949 FBtr0074604 Cyp308a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5350 chr3R 12107992 12108046 + 46 NA exon (FBgn0250823, exon 2 of 12) protein_coding-exon (FBgn0250823, exon 2 of 12) 9843 FBgn0250823 FBgn0250823 FBtr0100332 gish protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6572 chr3RHet 1576136 1576190 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7115 chrX 8716265 8716332 + 46 NA Intergenic Intergenic -16058 FBgn0030065 FBgn0030065 FBtr0071253 CG12075 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4273 chr3L 17257716 17257783 + 46 NA TTS (FBgn0264462) ncRNA-TTS (FBgn0264462) 233 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5124 chr3R 8593370 8593427 + 46 NA intron (FBgn0038084, intron 1 of 5) protein_coding-intron (FBgn0038084, intron 1 of 5) 10476 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3385 chr2RHet 2589471 2589683 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3683 chr3L 6821981 6822076 + 46 NA Intergenic Intergenic 38770 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5185 chr3R 9428512 9428577 + 46 NA Intergenic Intergenic 4999 FBgn0261818 FBgn0261818 FBtr0303306 CG42760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_944 chr2L 14419096 14419192 + 46 NA Intergenic Intergenic -1826 FBgn0032546 FBgn0032546 FBtr0080634 pburs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2263 chr2R 6271677 6271731 + 46 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) -4090 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1846 chr2L 22675837 22675897 + 46 NA Intergenic Intergenic 15141 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5357 chr3R 12207487 12207554 + 46 NA intron (FBgn0003513, intron 4 of 8) protein_coding-intron (FBgn0003513, intron 4 of 7) -11265 FBgn0038423 FBgn0038423 FBtr0300678 CG10317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_979 chr2L 14599652 14599706 + 46 NA promoter-TSS (FBgn0028910) tRNA-promoter-TSS (FBgn0028910) 5 FBgn0028910 FBgn0028910 FBtr0080647 tRNA:P:35Bc tRNA Nup98-S2-pascual-garcia2017_R1_peak_6230 chr3R 24543011 24543080 + 46 NA intron (FBgn0027655, intron 15 of 28) protein_coding-intron (FBgn0027655, intron 15 of 28) 21081 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_656 chr2L 9879722 9879777 + 46 NA intron (FBgn0032151, intron 1 of 13) protein_coding-intron (FBgn0032151, intron 1 of 13) 6501 FBgn0032151 FBgn0032151 FBtr0331284 nAcRalpha-30D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4647 chr3R 1238250 1238304 + 46 NA promoter-TSS (FBgn0037324) protein_coding-promoter-TSS (FBgn0037324) -149 FBgn0037324 FBgn0037324 FBtr0078794 Orco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7175 chrX 12932151 12932205 + 46 NA intron (FBgn0261388, intron 1 of 14) protein_coding-intron (FBgn0261388, intron 1 of 14) 2156 FBgn0261388 FBgn0261388 FBtr0302270 CG42629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3030 chr2R 19220175 19220231 + 46 NA Intergenic Intergenic -2610 FBgn0050413 FBgn0050413 FBtr0072040 CG30413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5239 chr3R 10369776 10369830 + 46 NA intron (FBgn0038237, intron 2 of 13) protein_coding-intron (FBgn0038237, intron 2 of 13) 13891 FBgn0038237 FBgn0038237 FBtr0330048 Pde6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3714 chr3L 7049952 7050006 + 46 NA Intergenic Intergenic -9435 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_741 chr2L 11550287 11550349 + 46 NA Intergenic Intergenic 14173 FBgn0263386 FBgn0263386 FBtr0309073 CG43438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1142 chr2L 16063327 16063381 + 46 NA intron (FBgn0013433, intron 2 of 7) protein_coding-intron (FBgn0013433, intron 2 of 7) 13359 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6437 chr3R 26763723 26763777 + 46 NA promoter-TSS (FBgn0039811) protein_coding-promoter-TSS (FBgn0039811) -926 FBgn0039811 FBgn0039811 FBtr0085751 CG15550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6233 chr3R 24570144 24570199 + 46 NA promoter-TSS (FBgn0039595) protein_coding-promoter-TSS (FBgn0039595) 314 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6825 chrU 3293533 3293625 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_946 chr2L 14424714 14424798 + 46 NA exon (FBgn0028871, exon 2 of 2) protein_coding-exon (FBgn0028871, exon 2 of 2) 375 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2920 chr2R 17253052 17253243 + 46 NA intron (FBgn0000395, intron 2 of 6) protein_coding-intron (FBgn0000395, intron 2 of 6) 13820 FBgn0000395 FBgn0000395 FBtr0071610 cv-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1910 chr2LHet 245687 245741 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4754 chr3R 2746198 2746256 + 46 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) 12335 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3390 chr2RHet 3012376 3012437 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3156 chr2RHet 154803 154951 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1229 chr2L 17042886 17042941 + 46 NA exon (FBgn0264346, exon 2 of 2) ncRNA-exon (FBgn0264346, exon 2 of 2) 252 FBgn0264346 FBgn0264346 FBtr0332013 CR43802 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5789 chr3R 17313669 17313723 + 46 NA TTS (FBgn0038889) protein_coding-TTS (FBgn0038889) 5649 FBgn0038889 FBgn0038889 FBtr0084109 CG7922 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1799 chr2L 22421073 22421143 + 46 NA Intergenic Intergenic 7217 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6470 chr3R 26997079 26997172 + 46 NA exon (FBgn0013973, exon 17 of 17) protein_coding-exon (FBgn0013973, exon 17 of 17) -2300 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3794 chr3L 8734251 8734311 + 46 NA intron (FBgn0003149, intron 4 of 8) protein_coding-intron (FBgn0003149, intron 4 of 8) -2274 FBgn0003149 FBgn0003149 FBtr0306639 Prm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6725 chrU 237192 237246 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3209 chr2RHet 819605 819660 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_775 chr2L 12162667 12162728 + 46 NA TTS (FBgn0051861) protein_coding-TTS (FBgn0051861) 902 FBgn0051861 FBgn0051861 FBtr0302986 CG31861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3300 chr2RHet 1931882 1931962 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3147 chr2RHet 107181 107235 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5379 chr3R 12366260 12366320 + 46 NA intron (FBgn0259244, intron 2 of 15) protein_coding-intron (FBgn0259244, intron 2 of 16) -30947 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5136 chr3R 8662379 8662442 + 46 NA Intergenic Intergenic 11731 FBgn0038087 FBgn0038087 FBtr0302367 beat-Va protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4503 chr3L 23781524 23781578 + 46 NA Intergenic Intergenic 4220 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6535 chr3R 27834334 27834390 + 46 NA Intergenic Intergenic 21791 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2370 chr2R 7961921 7961998 + 46 NA intron (FBgn0033679, intron 2 of 6) protein_coding-intron (FBgn0033679, intron 2 of 6) 5089 FBgn0033679 FBgn0033679 FBtr0088022 CG8888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1628 chr2L 21394050 21394104 + 46 NA TTS (FBgn0032946) protein_coding-TTS (FBgn0032946) -10038 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5686 chr3R 15962694 15962760 + 46 NA Intergenic Intergenic 2916 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5979 chr3R 22114213 22114267 + 46 NA Intergenic Intergenic 25856 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5042 chr3R 7147087 7147149 + 46 NA Intergenic Intergenic -11782 FBgn0004595 FBgn0004595 FBtr0304607 pros protein_coding Nup98-S2-pascual-garcia2017_R1_peak_437 chr2L 6700345 6700404 + 46 NA exon (FBgn0031850, exon 5 of 11) protein_coding-exon (FBgn0031850, exon 5 of 11) -10981 FBgn0031850 FBgn0031850 FBtr0079314 Tsp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3807 chr3L 8997981 8998128 + 46 NA promoter-TSS (FBgn0035954) protein_coding-promoter-TSS (FBgn0035954) -242 FBgn0035954 FBgn0035954 FBtr0076521 Doc3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1107 chr2L 15619096 15619150 + 46 NA Intergenic Intergenic 2121 FBgn0028947 FBgn0028947 FBtr0080753 CG11865 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1183 chr2L 16486081 16486282 + 46 NA promoter-TSS (FBgn0005677) protein_coding-promoter-TSS (FBgn0005677) -197 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3552 chr3L 3278810 3278877 + 46 NA Intergenic Intergenic -1396 FBgn0035429 FBgn0035429 FBtr0308313 CG12017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_544 chr2L 8645670 8645741 + 46 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) 25677 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5813 chr3R 17919871 17919932 + 46 NA intron (FBgn0038930, intron 1 of 2) protein_coding-intron (FBgn0038930, intron 1 of 2) 7046 FBgn0040582 FBgn0040582 FBtr0084180 CG5791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3285 chr2RHet 1911084 1911151 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4479 chr3L 23526761 23526822 + 46 NA Intergenic Intergenic -22234 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4043 chr3L 13583745 13583834 + 46 NA intron (FBgn0264001, intron 3 of 10) protein_coding-intron (FBgn0264001, intron 5 of 12) -30148 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_882 chr2L 13689391 13689451 + 46 NA exon (FBgn0051814, exon 8 of 13) protein_coding-exon (FBgn0051814, exon 8 of 13) -18794 FBgn0028848 FBgn0028848 FBtr0310273 CG7311 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5074 chr3R 7767472 7767581 + 46 NA intron (FBgn0037963, intron 2 of 15) protein_coding-intron (FBgn0037963, intron 2 of 15) 7325 FBgn0037963 FBgn0037963 FBtr0082513 Cad87A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5099 chr3R 8112740 8112794 + 46 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) 5893 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7097 chrX 7969554 7969646 + 46 NA promoter-TSS (FBgn0029993) protein_coding-promoter-TSS (FBgn0029993) -92 FBgn0029992 FBgn0029992 FBtr0071117 Upf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1517 chr2L 20235994 20236099 + 46 NA Intergenic Intergenic -12177 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5982 chr3R 22128663 22128758 + 46 NA Intergenic Intergenic 22287 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3588 chr3L 4511477 4511537 + 46 NA exon (FBgn0014073, exon 6 of 6) protein_coding-exon (FBgn0014073, exon 6 of 6) -3074 FBgn0261526 FBgn0261526 FBtr0301520 NT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4759 chr3R 2804389 2804451 + 46 NA intron (FBgn0260642, intron 1 of 6) protein_coding-intron (FBgn0260642, intron 1 of 6) -45858 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6705 chrU 152918 152985 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4030 chr3L 13370143 13370211 + 46 NA promoter-TSS (FBgn0036350) protein_coding-promoter-TSS (FBgn0036350) -910 FBgn0036350 FBgn0036350 FBtr0331787 CG14111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5318 chr3R 11749821 11749885 + 46 NA intron (FBgn0038385, intron 1 of 4) protein_coding-intron (FBgn0038385, intron 1 of 4) -1498 FBgn0085305 FBgn0085305 FBtr0112471 CG34276 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6553 chr3RHet 751340 751418 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3111 chr2R 20681012 20681071 + 46 NA promoter-TSS (FBgn0015801) protein_coding-promoter-TSS (FBgn0015801) -112 FBgn0015801 FBgn0015801 FBtr0305671 Reg-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4946 chr3R 5798294 5798363 + 46 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 13454 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_391 chr2L 5788415 5788469 + 46 NA intron (FBgn0031738, intron 2 of 7) protein_coding-intron (FBgn0031738, intron 2 of 7) 4411 FBgn0051913 FBgn0051913 FBtr0079138 CG31913 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3136 chr2RHet 21517 21571 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6175 chr3R 24021918 24021992 + 46 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 49353 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6404 chr3R 26314725 26314779 + 46 NA promoter-TSS (FBgn0039778) protein_coding-promoter-TSS (FBgn0039778) 67 FBgn0039778 FBgn0039778 FBtr0085652 Jon99Fi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6726 chrU 247254 247308 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7033 chrX 3625928 3625982 + 46 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -12290 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2441 chr2R 9178957 9179014 + 46 NA intron (FBgn0052843, intron 1 of 10) protein_coding-intron (FBgn0052843, intron 1 of 10) 4444 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2768 chr2R 14623799 14623915 + 46 NA intron (FBgn0053147, intron 3 of 8) protein_coding-intron (FBgn0053147, intron 3 of 8) -2140 FBgn0053998 FBgn0053998 FBtr0100053 CG33998 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3831 chr3L 9586041 9586122 + 46 NA exon (FBgn0261555, exon 10 of 10) protein_coding-exon (FBgn0261555, exon 10 of 10) -4873 FBgn0036013 FBgn0036013 FBtr0076378 CG14177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2776 chr2R 14789824 14789921 + 46 NA intron (FBgn0034408, intron 2 of 7) protein_coding-intron (FBgn0034408, intron 2 of 7) 2938 FBgn0086022 FBgn0086022 FBtr0114298 snoRNA:Me28S-U1130 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4169 chr3L 15788717 15788776 + 46 NA Intergenic Intergenic -12676 FBgn0036531 FBgn0036531 FBtr0075502 CG6244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4020 chr3L 13110156 13110221 + 46 NA exon (FBgn0010452, exon 2 of 2) protein_coding-exon (FBgn0010452, exon 2 of 2) 2817 FBgn0010452 FBgn0010452 FBtr0330075 trn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7127 chrX 9588083 9588166 + 46 NA promoter-TSS (FBgn0000233) protein_coding-promoter-TSS (FBgn0000233) -97 FBgn0000233 FBgn0000233 FBtr0071379 btd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1459 chr2L 19677211 19677265 + 46 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 23730 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5390 chr3R 12526555 12526651 + 46 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) 33745 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3858 chr3L 10398827 10398898 + 46 NA Intergenic Intergenic 6615 FBgn0264722 FBgn0264722 FBtr0334101 CR43990 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5437 chr3R 12990570 12990636 + 46 NA Intergenic Intergenic -4933 FBgn0038492 FBgn0038492 FBtr0083413 Mur89F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6707 chrU 155640 155722 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_913 chr2L 14154044 14154098 + 46 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 9151 FBgn0263037 FBgn0263037 FBtr0306928 CG43332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1926 chr2R 236191 236245 + 46 NA intron (FBgn0260798, intron 13 of 15) protein_coding-intron (FBgn0260798, intron 12 of 14) -105774 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3833 chr3L 9691364 9691420 + 46 NA promoter-TSS (FBgn0015321) protein_coding-promoter-TSS (FBgn0015321) -44 FBgn0015321 FBgn0015321 FBtr0076395 UbcD4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7232 chrX 17670254 17670308 + 46 NA exon (FBgn0024184, exon 2 of 4) protein_coding-exon (FBgn0024184, exon 2 of 4) 6865 FBgn0024184 FBgn0024184 FBtr0074460 unc-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5494 chr3R 13706915 13706994 + 46 NA exon (FBgn0053547, exon 21 of 27) protein_coding-exon (FBgn0053547, exon 21 of 27) -25232 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2681 chr2R 13095167 13095221 + 46 NA Intergenic Intergenic 2481 FBgn0262882 FBgn0262882 FBtr0306290 CG43237 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2349 chr2R 7679184 7679238 + 46 NA intron (FBgn0033652, intron 1 of 3) protein_coding-intron (FBgn0033652, intron 1 of 3) 1337 FBgn0033652 FBgn0033652 FBtr0088030 ths protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7055 chrX 5244373 5244436 + 46 NA intron (FBgn0029761, intron 2 of 14) protein_coding-intron (FBgn0029761, intron 2 of 10) 10135 FBgn0029761 FBgn0029761 FBtr0301952 SK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3846 chr3L 10049718 10049772 + 46 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 32755 FBgn0036066 FBgn0036066 FBtr0076316 CG14160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1087 chr2L 15478256 15478364 + 46 NA promoter-TSS (FBgn0003448) protein_coding-promoter-TSS (FBgn0003448) -41 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2890 chr2R 16728275 16728329 + 46 NA Intergenic Intergenic -4733 FBgn0011674 FBgn0011674 FBtr0071562 insc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6385 chr3R 25789958 25790012 + 46 NA intron (FBgn0004622, intron 1 of 9) protein_coding-intron (FBgn0004622, intron 1 of 9) 5184 FBgn0004622 FBgn0004622 FBtr0330298 Takr99D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3966 chr3L 12323537 12323606 + 46 NA intron (FBgn0052105, intron 1 of 2) protein_coding-intron (FBgn0052105, intron 1 of 2) 1239 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_15 chr2L 386974 387058 + 46 NA exon (FBgn0000061, exon 5 of 5) protein_coding-exon (FBgn0000061, exon 5 of 5) 8904 FBgn0000061 FBgn0000061 FBtr0078053 al protein_coding Nup98-S2-pascual-garcia2017_R1_peak_118 chr2L 1474604 1474668 + 46 NA Intergenic Intergenic -17659 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3162 chr2RHet 373833 373903 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_248 chr2L 3738066 3738124 + 46 NA intron (FBgn0031568, intron 1 of 12) protein_coding-intron (FBgn0031568, intron 1 of 12) 7629 FBgn0031568 FBgn0031568 FBtr0273188 CG10019 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6329 chr3R 25473317 25473371 + 46 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 12362 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2829 chr2R 15658478 15658532 + 46 NA exon (FBgn0034473, exon 1 of 6) protein_coding-exon (FBgn0034473, exon 1 of 6) 233 FBgn0034473 FBgn0034473 FBtr0086344 Or56a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4419 chr3L 20699183 20699247 + 46 NA Intergenic Intergenic -7985 FBgn0085289 FBgn0085289 FBtr0333482 CG34260 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4204 chr3L 16250647 16250743 + 46 NA promoter-TSS (FBgn0036584) protein_coding-promoter-TSS (FBgn0036584) -404 FBgn0036584 FBgn0036584 FBtr0075481 CG13054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5779 chr3R 17245289 17245346 + 46 NA intron (FBgn0008651, intron 1 of 3) protein_coding-intron (FBgn0008651, intron 1 of 2) 10472 FBgn0051438 FBgn0051438 FBtr0084090 CheB93b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6701 chrU 131104 131170 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1565 chr2L 20618412 20618491 + 46 NA promoter-TSS (FBgn0262425) pre_miRNA-promoter-TSS (FBgn0262425) -54 FBgn0262425 FBgn0262425 FBtr0304384 mir-288 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2758 chr2R 14364265 14364336 + 46 NA exon (FBgn0028496, exon 3 of 19) protein_coding-exon (FBgn0028496, exon 3 of 19) 21196 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6735 chrU 285311 285365 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4203 chr3L 16245731 16245785 + 46 NA promoter-TSS (FBgn0036583) protein_coding-promoter-TSS (FBgn0036583) -303 FBgn0036583 FBgn0036583 FBtr0075482 CG13055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2504 chr2R 10164263 10164317 + 46 NA intron (FBgn0263397, intron 1 of 7) protein_coding-intron (FBgn0263397, intron 1 of 14) 5984 FBgn0261269 FBgn0261269 FBtr0087540 conv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3169 chr2RHet 409269 409377 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5960 chr3R 21862152 21862208 + 46 NA promoter-TSS (FBgn0002633) protein_coding-promoter-TSS (FBgn0002633) -580 FBgn0002633 FBgn0002633 FBtr0084960 HLHm7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3825 chr3L 9313038 9313096 + 46 NA Intergenic Intergenic -15722 FBgn0035975 FBgn0035975 FBtr0076433 PGRP-LA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6614 chr4 555340 555394 + 46 NA exon (FBgn0004607, exon 11 of 14) protein_coding-exon (FBgn0004607, exon 11 of 14) 23113 FBgn0264618 FBgn0264618 FBtr0333707 CR43958 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4371 chr3L 18752444 18752507 + 46 NA intron (FBgn0001078, intron 1 of 7) protein_coding-intron (FBgn0001078, intron 3 of 9) 6369 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3036 chr2R 19319630 19319711 + 46 NA Intergenic Intergenic -6250 FBgn0034861 FBgn0034861 FBtr0072024 CG9815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2968 chr2R 18163582 18163636 + 46 NA intron (FBgn0020307, intron 1 of 4) protein_coding-intron (FBgn0020307, intron 2 of 5) 5184 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5468 chr3R 13416321 13416401 + 46 NA Intergenic Intergenic -3747 FBgn0038523 FBgn0038523 FBtr0083460 CG7587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3163 chr2RHet 373988 374058 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1068 chr2L 15333788 15333889 + 46 NA promoter-TSS (FBgn0001981) protein_coding-promoter-TSS (FBgn0001981) -26 FBgn0001981 FBgn0001981 FBtr0080734 esg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3510 chr3L 2202666 2202756 + 46 NA Intergenic Intergenic 5280 FBgn0035315 FBgn0035315 FBtr0072872 CG8960 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4342 chr3L 18072398 18072481 + 46 NA Intergenic Intergenic -5957 FBgn0085281 FBgn0085281 FBtr0112446 CG34252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6787 chrU 1951303 1951378 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5087 chr3R 7990847 7990910 + 46 NA exon (FBgn0261714, exon 2 of 3) protein_coding-exon (FBgn0261714, exon 2 of 3) 1030 FBgn0261714 FBgn0261714 FBtr0082548 Cpn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3641 chr3L 6080616 6080672 + 46 NA exon (FBgn0035677, exon 3 of 9) protein_coding-exon (FBgn0035677, exon 3 of 9) 4661 FBgn0035677 FBgn0035677 FBtr0332064 CG13293 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_618 chr2L 9033959 9034049 + 46 NA Intergenic Intergenic -8600 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6412 chr3R 26488380 26488439 + 46 NA Intergenic Intergenic 12726 FBgn0085462 FBgn0085462 FBtr0304711 CG34433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4625 chr3R 844220 844286 + 46 NA Intergenic Intergenic -7500 FBgn0037292 FBgn0037292 FBtr0301312 CG2022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_271 chr2L 4175770 4175834 + 46 NA Intergenic Intergenic -9668 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5131 chr3R 8641332 8641407 + 46 NA intron (FBgn0051345, intron 1 of 4) protein_coding-intron (FBgn0051345, intron 1 of 4) 1382 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2366 chr2R 7850394 7850448 + 46 NA exon (FBgn0033668, exon 7 of 9) protein_coding-exon (FBgn0033668, exon 7 of 9) 5932 FBgn0033669 FBgn0033669 FBtr0088053 PI31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_245 chr2L 3684151 3684244 + 46 NA exon (FBgn0085369, exon 6 of 8) protein_coding-exon (FBgn0085369, exon 6 of 8) 8391 FBgn0031558 FBgn0031558 FBtr0077550 CG16704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_691 chr2L 10699046 10699188 + 46 NA TTS (FBgn0023496) protein_coding-TTS (FBgn0023496) -1093 FBgn0032286 FBgn0032286 FBtr0304136 CG7300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1566 chr2L 20626655 20626727 + 46 NA Intergenic Intergenic -7866 FBgn0032868 FBgn0032868 FBtr0081382 CG17472 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1007 chr2L 14744961 14745015 + 46 NA TTS (FBgn0260955) protein_coding-TTS (FBgn0260955) 222 FBgn0260955 FBgn0260955 FBtr0301742 CG42587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2567 chr2R 11124392 11124446 + 46 NA intron (FBgn0259878, intron 2 of 8) protein_coding-intron (FBgn0259878, intron 2 of 8) 4665 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5581 chr3R 14725863 14725940 + 46 NA TTS (FBgn0038655) protein_coding-TTS (FBgn0038655) 756 FBgn0003248 FBgn0003248 FBtr0083697 Rh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6204 chr3R 24247501 24247555 + 46 NA intron (FBgn0039584, intron 1 of 6) protein_coding-intron (FBgn0039584, intron 1 of 6) 3598 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5291 chr3R 11439815 11439869 + 46 NA Intergenic Intergenic -21348 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2023 chr2R 2454561 2454626 + 46 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) -33493 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4829 chr3R 3883255 3883309 + 46 NA Intergenic Intergenic -1724 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1233 chr2L 17063164 17063231 + 46 NA Intergenic Intergenic -14916 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3586 chr3L 4474000 4474138 + 46 NA exon (FBgn0035550, exon 2 of 2) protein_coding-exon (FBgn0035550, exon 2 of 2) 1001 FBgn0035550 FBgn0035550 FBtr0303005 CG11349 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1538 chr2L 20498467 20498527 + 46 NA Intergenic Intergenic 3391 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3829 chr3L 9561792 9561846 + 46 NA intron (FBgn0261555, intron 2 of 9) protein_coding-intron (FBgn0261555, intron 2 of 9) 21499 FBgn0261555 FBgn0261555 FBtr0302710 CG42673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3140 chr2RHet 45358 45412 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7049 chrX 4521348 4521407 + 46 NA TTS (FBgn0025387) protein_coding-TTS (FBgn0025387) 3592 FBgn0025387 FBgn0025387 FBtr0070696 CG12184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6543 chr3RHet 202312 202366 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5040 chr3R 7134364 7134428 + 46 NA Intergenic Intergenic -3066 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6200 chr3R 24229468 24229528 + 46 NA Intergenic Intergenic -14432 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2427 chr2R 8930327 8930381 + 46 NA Intergenic Intergenic 4439 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2576 chr2R 11350350 11350464 + 46 NA intron (FBgn0263980, intron 14 of 17) protein_coding-intron (FBgn0263980, intron 14 of 14) 19931 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6661 chr4 1029250 1029312 + 46 NA TTS (FBgn0019650) protein_coding-TTS (FBgn0019650) 18439 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4111 chr3L 14591619 14591676 + 46 NA exon (FBgn0040318, exon 1 of 4) protein_coding-exon (FBgn0040318, exon 1 of 4) 993 FBgn0040318 FBgn0040318 FBtr0075720 HGTX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1261 chr2L 17264636 17264705 + 46 NA Intergenic Intergenic -3938 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6542 chr3RHet 189466 189532 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2111 chr2R 4091601 4091672 + 46 NA TTS (FBgn0033275) protein_coding-TTS (FBgn0033275) 1575 FBgn0033275 FBgn0033275 FBtr0088804 CG14756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2564 chr2R 11114083 11114141 + 46 NA intron (FBgn0259878, intron 7 of 8) protein_coding-intron (FBgn0259878, intron 7 of 8) -6195 FBgn0001187 FBgn0001187 FBtr0087399 Hex-C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3254 chr2RHet 1723362 1723416 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1556 chr2L 20572242 20572320 + 46 NA Intergenic Intergenic 9857 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7126 chrX 9587869 9587945 + 46 NA promoter-TSS (FBgn0000233) protein_coding-promoter-TSS (FBgn0000233) -314 FBgn0000233 FBgn0000233 FBtr0071379 btd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_547 chr2L 8650610 8650665 + 46 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -22515 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1661 chr2L 21773399 21773474 + 46 NA exon (FBgn0051612, exon 2 of 4) protein_coding-exon (FBgn0051612, exon 2 of 4) 10629 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1888 chr2L 22925583 22925647 + 46 NA Intergenic Intergenic -7055 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5226 chr3R 10134301 10134355 + 46 NA promoter-TSS (FBgn0004855) protein_coding-promoter-TSS (FBgn0004855) -19 FBgn0003567 FBgn0003567 FBtr0082946 su(Hw) protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2535 chr2R 10629655 10629732 + 46 NA exon (FBgn0033958, exon 4 of 5) protein_coding-exon (FBgn0033958, exon 4 of 5) -2946 FBgn0263376 FBgn0263376 FBtr0309057 CR43428 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6630 chr4 784359 784427 + 46 NA exon (FBgn0005666, exon 33 of 41) protein_coding-exon (FBgn0005666, exon 33 of 41) 23869 FBgn0039923 FBgn0039923 FBtr0089254 MED26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3061 chr2R 19660543 19660599 + 46 NA intron (FBgn0034903, intron 4 of 13) protein_coding-intron (FBgn0034903, intron 4 of 13) 18148 FBgn0034904 FBgn0034904 FBtr0072245 CG15800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_304 chr2L 4435922 4435980 + 46 NA TTS (FBgn0085206) protein_coding-TTS (FBgn0085206) -1836 FBgn0262358 FBgn0262358 FBtr0304638 CG43056 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7262 chrX 19919104 19919182 + 46 NA promoter-TSS (FBgn0052826) tRNA-promoter-TSS (FBgn0052826) 11 FBgn0052826 FBgn0052826 FBtr0070001 tRNA:CR32826 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1454 chr2L 19628462 19628516 + 46 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 41866 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6753 chrU 1047506 1047561 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5623 chr3R 15316878 15316933 + 46 NA promoter-TSS (FBgn0038709) protein_coding-promoter-TSS (FBgn0038709) -68 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3699 chr3L 6962124 6962183 + 46 NA promoter-TSS (FBgn0035726) protein_coding-promoter-TSS (FBgn0035726) -5 FBgn0035725 FBgn0035725 FBtr0076936 Mis12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4349 chr3L 18176452 18176515 + 46 NA intron (FBgn0003997, intron 1 of 3) protein_coding-intron (FBgn0003997, intron 1 of 3) 2258 FBgn0003997 FBgn0003997 FBtr0332862 W protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4686 chr3R 1894852 1894906 + 46 NA Intergenic Intergenic 9126 FBgn0037399 FBgn0037399 FBtr0078620 Or83c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2675 chr2R 12882641 12882709 + 46 NA TTS (FBgn0050462) protein_coding-TTS (FBgn0050462) 3424 FBgn0050461 FBgn0050461 FBtr0100252 CG30461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4669 chr3R 1632769 1632893 + 46 NA exon (FBgn0263353, exon 3 of 4) protein_coding-exon (FBgn0263353, exon 3 of 4) 4781 FBgn0263353 FBgn0263353 FBtr0113195 CG11000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1696 chr2L 21948096 21948156 + 46 NA Intergenic Intergenic 31765 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2531 chr2R 10571925 10571984 + 46 NA exon (FBgn0020269, exon 2 of 6) protein_coding-exon (FBgn0020269, exon 2 of 6) -6313 FBgn0050480 FBgn0050480 FBtr0087478 CG30480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5800 chr3R 17550816 17550872 + 46 NA Intergenic Intergenic 4773 FBgn0262542 FBgn0262542 FBtr0304882 CR43096 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2957 chr2R 17925780 17925834 + 46 NA intron (FBgn0085399, intron 1 of 8) protein_coding-intron (FBgn0085399, intron 1 of 8) 1129 FBgn0085399 FBgn0085399 FBtr0332252 CG34370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3500 chr3L 1999156 1999230 + 46 NA Intergenic Intergenic 6458 FBgn0262030 FBgn0262030 FBtr0303925 CG42841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6805 chrU 2420968 2421032 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1923 chr2R 184736 184849 + 46 NA Intergenic Intergenic -54348 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1045 chr2L 15087655 15087734 + 46 NA exon (FBgn0028879, exon 3 of 17) protein_coding-exon (FBgn0028879, exon 3 of 17) 12918 FBgn0028879 FBgn0028879 FBtr0332180 CG15270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2173 chr2R 4909701 4909765 + 46 NA exon (FBgn0033365, exon 3 of 9) protein_coding-exon (FBgn0033365, exon 3 of 9) 4373 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1725 chr2L 22024669 22024740 + 46 NA TTS (FBgn0028979) protein_coding-TTS (FBgn0028979) 4669 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6285 chr3R 25151047 25151189 + 46 NA Intergenic Intergenic -5782 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2144 chr2R 4639695 4639749 + 46 NA intron (FBgn0027585, intron 1 of 7) protein_coding-intron (FBgn0027585, intron 1 of 7) 14847 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3888 chr3L 10712709 10712772 + 46 NA Intergenic Intergenic -22763 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2483 chr2R 9677048 9677104 + 46 NA Intergenic Intergenic -2375 FBgn0264359 FBgn0264359 FBtr0332254 CR43811 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6610 chr4 550351 550437 + 46 NA exon (FBgn0004607, exon 7 of 14) protein_coding-exon (FBgn0004607, exon 7 of 14) 27958 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3337 chr2RHet 2143619 2143674 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_420 chr2L 6315858 6315913 + 46 NA intron (FBgn0053531, intron 15 of 17) protein_coding-intron (FBgn0053531, intron 15 of 17) 7066 FBgn0260452 FBgn0260452 FBtr0079247 CG13984 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5448 chr3R 13199978 13200067 + 46 NA TTS (FBgn0038499) protein_coding-TTS (FBgn0038499) -8183 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7124 chrX 9535281 9535365 + 46 NA promoter-TSS (FBgn0028341) protein_coding-promoter-TSS (FBgn0028341) -666 FBgn0028341 FBgn0028341 FBtr0303559 l(1)G0232 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6949 chrUextra 22966456 22966510 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3051 chr2R 19574957 19575026 + 46 NA promoter-TSS (FBgn0262728) protein_coding-promoter-TSS (FBgn0262728) -693 FBgn0262728 FBgn0262728 FBtr0301509 Pal2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4655 chr3R 1332979 1333038 + 46 NA Intergenic Intergenic -8272 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3251 chr2RHet 1707523 1707578 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6654 chr4 1019770 1019887 + 46 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 9477 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6184 chr3R 24060004 24060062 + 46 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 29311 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5213 chr3R 9825087 9825148 + 46 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 26564 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1030 chr2L 14947053 14947135 + 46 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 22359 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_185 chr2L 2607249 2607309 + 46 NA Intergenic Intergenic -2867 FBgn0031440 FBgn0031440 FBtr0114513 CG15395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4547 chr3LHet 363900 363954 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7128 chrX 9623143 9623229 + 46 NA promoter-TSS (FBgn0020378) protein_coding-promoter-TSS (FBgn0020378) -495 FBgn0020378 FBgn0020378 FBtr0331335 Sp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_811 chr2L 12666156 12666247 + 46 NA intron (FBgn0004394, intron 2 of 4) protein_coding-intron (FBgn0004394, intron 2 of 4) 3513 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2178 chr2R 4954374 4954476 + 46 NA Intergenic Intergenic -2181 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1216 chr2L 16942483 16942538 + 46 NA Intergenic Intergenic 2864 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1993 chr2R 1677319 1677373 + 46 NA Intergenic Intergenic 3126 FBgn0033041 FBgn0033041 FBtr0086052 Or42a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_414 chr2L 6169282 6169346 + 46 NA Intergenic Intergenic 8870 FBgn0031786 FBgn0031786 FBtr0079204 CG13989 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2097 chr2R 3916951 3917054 + 46 NA exon (FBgn0263970, exon 1 of 2) ncRNA-exon (FBgn0263970, exon 1 of 2) 431 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3731 chr3L 7388189 7388279 + 46 NA intron (FBgn0035777, intron 4 of 4) protein_coding-intron (FBgn0035777, intron 4 of 4) -1221 FBgn0052379 FBgn0052379 FBtr0273419 CG32379 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5126 chr3R 8605901 8605955 + 46 NA Intergenic Intergenic -2054 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5566 chr3R 14442907 14442961 + 46 NA exon (FBgn0038631, exon 1 of 2) protein_coding-exon (FBgn0038631, exon 1 of 2) 299 FBgn0038631 FBgn0038631 FBtr0083694 CG7695 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4880 chr3R 4467135 4467201 + 46 NA TTS (FBgn0012028) tRNA-TTS (FBgn0012028) 979 FBgn0012028 FBgn0012028 FBtr0081895 tRNA:Y1:85Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_3806 chr3L 8996673 8996727 + 46 NA Intergenic Intergenic -1596 FBgn0035954 FBgn0035954 FBtr0076521 Doc3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4896 chr3R 4703186 4703240 + 46 NA intron (FBgn0262614, intron 2 of 13) protein_coding-intron (FBgn0262614, intron 2 of 13) 14558 FBgn0053551 FBgn0053551 FBtr0091521 tRNA:R:85Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4582 chr3LHet 2264909 2264963 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_648 chr2L 9800640 9800705 + 46 NA intron (FBgn0032151, intron 10 of 13) protein_coding-intron (FBgn0032151, intron 10 of 13) -7565 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6920 chrUextra 9849072 9849130 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1120 chr2L 15817580 15817637 + 46 NA Intergenic Intergenic -5467 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5431 chr3R 12795298 12795372 + 46 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -5591 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6266 chr3R 24808802 24808856 + 46 NA Intergenic Intergenic -12753 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6605 chr4 527502 527597 + 46 NA intron (FBgn0004607, intron 2 of 12) protein_coding-intron (FBgn0004607, intron 2 of 13) 5113 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4560 chr3LHet 949020 949086 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_58 chr2L 984676 984737 + 46 NA Intergenic Intergenic 42184 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5828 chr3R 18167044 18167100 + 46 NA TTS (FBgn0038945) protein_coding-TTS (FBgn0038945) 864 FBgn0038945 FBgn0038945 FBtr0084240 CG5386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_82 chr2L 1211669 1211789 + 46 NA Intergenic Intergenic 6056 FBgn0262944 FBgn0262944 FBtr0306546 CR43263 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5613 chr3R 15163569 15163623 + 46 NA Intergenic Intergenic 8138 FBgn0262903 FBgn0262903 FBtr0306320 CR43258 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_20 chr2L 595179 595278 + 46 NA promoter-TSS (FBgn0010323) protein_coding-promoter-TSS (FBgn0010323) -418 FBgn0010323 FBgn0010323 FBtr0078072 Gsc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1250 chr2L 17203089 17203163 + 46 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 21188 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1708 chr2L 21968088 21968184 + 46 NA Intergenic Intergenic 24797 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3194 chr2RHet 609756 609812 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6581 chr3RHet 2023447 2023505 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6214 chr3R 24386864 24386918 + 46 NA Intergenic Intergenic -16367 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2365 chr2R 7843131 7843220 + 46 NA exon (FBgn0033668, exon 3 of 9) protein_coding-exon (FBgn0033668, exon 3 of 9) 13178 FBgn0033669 FBgn0033669 FBtr0088053 PI31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3453 chr3L 1102827 1102881 + 46 NA Intergenic Intergenic -1765 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5961 chr3R 21898243 21898321 + 46 NA Intergenic Intergenic -9549 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3922 chr3L 11502149 11502229 + 46 NA promoter-TSS (FBgn0003377) protein_coding-promoter-TSS (FBgn0003377) 305 FBgn0003378 FBgn0003378 FBtr0076160 Sgs8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6595 chr4 103911 103969 + 46 NA intron (FBgn0085432, intron 5 of 11) protein_coding-intron (FBgn0085432, intron 6 of 12) 13653 FBgn0085432 FBgn0085432 FBtr0112657 pan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6766 chrU 1256782 1256856 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4216 chr3L 16458499 16458556 + 46 NA intron (FBgn0053158, intron 3 of 5) protein_coding-intron (FBgn0053158, intron 3 of 5) -13469 FBgn0261799 FBgn0261799 FBtr0075409 dsx-c73A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5254 chr3R 10797435 10797489 + 46 NA Intergenic Intergenic -43030 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4252 chr3L 17063440 17063507 + 46 NA exon (FBgn0260943, exon 8 of 12) protein_coding-exon (FBgn0260943, exon 8 of 12) 14760 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3386 chr2RHet 2595725 2595779 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3378 chr2RHet 2371165 2371243 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5760 chr3R 16831602 16831706 + 46 NA exon (FBgn0038845, exon 1 of 2) protein_coding-exon (FBgn0038845, exon 1 of 2) 1055 FBgn0038845 FBgn0038845 FBtr0084048 CG10827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5474 chr3R 13445862 13445977 + 46 NA promoter-TSS (FBgn0011840) tRNA-promoter-TSS (FBgn0011840) 19 FBgn0011840 FBgn0011840 FBtr0083499 tRNA:A:90C tRNA Nup98-S2-pascual-garcia2017_R1_peak_1896 chr2LHet 41317 41371 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3199 chr2RHet 704338 704426 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6045 chr3R 22600573 22600654 + 46 NA Intergenic Intergenic 9317 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4493 chr3L 23696576 23696642 + 46 NA Intergenic Intergenic -11782 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5557 chr3R 14359986 14360058 + 46 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 11286 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6600 chr4 190123 190177 + 46 NA exon (FBgn0053978, exon 4 of 4) protein_coding-exon (FBgn0053978, exon 4 of 4) 5616 FBgn0053978 FBgn0053978 FBtr0310436 CG33978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1368 chr2L 18345694 18345755 + 46 NA intron (FBgn0000636, intron 1 of 6) protein_coding-intron (FBgn0000636, intron 1 of 7) 13302 FBgn0011559 FBgn0011559 FBtr0081054 Acp36DE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1523 chr2L 20290938 20291003 + 46 NA Intergenic Intergenic -3737 FBgn0040996 FBgn0040996 FBtr0081351 CG12617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1327 chr2L 17941098 17941167 + 46 NA Intergenic Intergenic -22001 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2043 chr2R 2958238 2958407 + 46 NA promoter-TSS (FBgn0050299) tRNA-promoter-TSS (FBgn0050299) 16 FBgn0050299 FBgn0050299 FBtr0089058 tRNA:CR30299 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5614 chr3R 15192380 15192440 + 46 NA Intergenic Intergenic 8061 FBgn0038697 FBgn0038697 FBtr0083775 CG3581 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2090 chr2R 3894855 3894993 + 46 NA TTS (FBgn0013307) protein_coding-TTS (FBgn0013307) 155 FBgn0013308 FBgn0013308 FBtr0088864 Odc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1306 chr2L 17784767 17784849 + 46 NA Intergenic Intergenic -7604 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_623 chr2L 9091984 9092038 + 46 NA Intergenic Intergenic -5616 FBgn0051609 FBgn0051609 FBtr0299873 CG31609 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1331 chr2L 17956700 17956754 + 46 NA Intergenic Intergenic -6687 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3813 chr3L 9034262 9034333 + 46 NA promoter-TSS (FBgn0028789) protein_coding-promoter-TSS (FBgn0028789) -632 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4524 chr3L 24071429 24071536 + 46 NA intron (FBgn0011288, intron 1 of 6) protein_coding-intron (FBgn0011288, intron 1 of 7) 4153 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2473 chr2R 9560524 9560578 + 46 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 5310 FBgn0033864 FBgn0033864 FBtr0087627 CG18368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3292 chr2RHet 1920503 1920573 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1223 chr2L 17002366 17002431 + 46 NA Intergenic Intergenic 10656 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7071 chrX 5885710 5885772 + 46 NA exon (FBgn0029831, exon 3 of 3) protein_coding-exon (FBgn0029831, exon 3 of 3) 2896 FBgn0029831 FBgn0029831 FBtr0070866 CG5966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1270 chr2L 17347580 17347644 + 46 NA Intergenic Intergenic 7056 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5790 chr3R 17325600 17325663 + 46 NA promoter-TSS (FBgn0004863) protein_coding-promoter-TSS (FBgn0004863) -346 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_305 chr2L 4437515 4437589 + 46 NA promoter-TSS (FBgn0262358) protein_coding-promoter-TSS (FBgn0262358) -235 FBgn0262358 FBgn0262358 FBtr0304638 CG43056 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5373 chr3R 12327639 12327709 + 46 NA promoter-TSS (FBgn0028381) protein_coding-promoter-TSS (FBgn0028381) -280 FBgn0028381 FBgn0028381 FBtr0083304 decay protein_coding Nup98-S2-pascual-garcia2017_R1_peak_990 chr2L 14635065 14635122 + 46 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 18824 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2112 chr2R 4194690 4194775 + 46 NA Intergenic Intergenic 9112 FBgn0262440 FBgn0262440 FBtr0304435 mir-280 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3812 chr3L 9024017 9024096 + 46 NA Intergenic Intergenic -10873 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3184 chr2RHet 556321 556377 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2802 chr2R 15237030 15237108 + 46 NA exon (FBgn0050127, exon 2 of 8) protein_coding-exon (FBgn0050127, exon 2 of 8) 6961 FBgn0050127 FBgn0050127 FBtr0332919 CG30127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2797 chr2R 15149483 15149560 + 46 NA exon (FBgn0034423, exon 2 of 2) protein_coding-exon (FBgn0034423, exon 2 of 2) 2107 FBgn0034423 FBgn0034423 FBtr0086511 CG7229 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1339 chr2L 18036674 18036738 + 46 NA intron (FBgn0243486, intron 3 of 14) protein_coding-intron (FBgn0243486, intron 3 of 14) 24299 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1464 chr2L 19695187 19695261 + 46 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 5744 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4790 chr3R 3135451 3135558 + 46 NA promoter-TSS (FBgn0259172) protein_coding-promoter-TSS (FBgn0259172) -385 FBgn0259172 FBgn0259172 FBtr0299637 rn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1027 chr2L 14937748 14937802 + 46 NA intron (FBgn0259213, intron 4 of 19) protein_coding-intron (FBgn0259213, intron 4 of 19) 13040 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6263 chr3R 24764595 24764649 + 46 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 15856 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5234 chr3R 10324612 10324690 + 46 NA Intergenic Intergenic 12783 FBgn0038233 FBgn0038233 FBtr0082987 HtrA2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1717 chr2L 21999429 21999522 + 46 NA Intergenic Intergenic -6542 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4118 chr3L 14835740 14835796 + 46 NA intron (FBgn0036454, intron 3 of 7) protein_coding-intron (FBgn0036454, intron 3 of 18) 37416 FBgn0036454 FBgn0036454 FBtr0110825 CG17839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5804 chr3R 17626464 17626518 + 46 NA intron (FBgn0013759, intron 8 of 17) protein_coding-intron (FBgn0013759, intron 8 of 17) -2213 FBgn0263521 FBgn0263521 FBtr0309593 mir-4969 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2727 chr2R 13908469 13908541 + 46 NA exon (FBgn0034289, exon 3 of 3) protein_coding-exon (FBgn0034289, exon 3 of 3) 751 FBgn0034289 FBgn0034289 FBtr0089630 CG10910 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2729 chr2R 13935472 13935532 + 46 NA promoter-TSS (FBgn0034292) protein_coding-promoter-TSS (FBgn0034292) -115 FBgn0054005 FBgn0054005 FBtr0300216 CG34005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5650 chr3R 15584092 15584146 + 46 NA intron (FBgn0024963, intron 4 of 12) protein_coding-intron (FBgn0024963, intron 4 of 11) -13920 FBgn0263499 FBgn0263499 FBtr0309521 CR43488 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4965 chr3R 6075368 6075434 + 46 NA exon (FBgn0261928, exon 10 of 10) protein_coding-exon (FBgn0261928, exon 10 of 10) -1840 FBgn0037801 FBgn0037801 FBtr0082225 CG3999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2684 chr2R 13143080 13143134 + 46 NA promoter-TSS (FBgn0263708) ncRNA-promoter-TSS (FBgn0263708) 361 FBgn0262961 FBgn0262961 FBtr0306715 CG43272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_639 chr2L 9563648 9563711 + 46 NA intron (FBgn0032129, intron 1 of 8) protein_coding-intron (FBgn0032129, intron 1 of 8) -3253 FBgn0032129 FBgn0032129 FBtr0113030 jp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4809 chr3R 3450636 3450695 + 46 NA intron (FBgn0083963, intron 1 of 12) protein_coding-intron (FBgn0083963, intron 1 of 12) 14491 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3144 chr2RHet 80989 81058 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_717 chr2L 11219133 11219189 + 46 NA intron (FBgn0264442, intron 1 of 6) protein_coding-intron (FBgn0264442, intron 2 of 8) -13069 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1426 chr2L 19254694 19254752 + 46 NA Intergenic Intergenic 8170 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1478 chr2L 19810189 19810245 + 46 NA promoter-TSS (FBgn0003931) snRNA-promoter-TSS (FBgn0003931) -517 FBgn0003931 FBgn0003931 FBtr0081292 snRNA:U4:38AB snRNA Nup98-S2-pascual-garcia2017_R1_peak_3862 chr3L 10586640 10586719 + 46 NA TTS (FBgn0052062) protein_coding-TTS (FBgn0052062) 29997 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3898 chr3L 10831394 10831480 + 45 NA Intergenic Intergenic -20067 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3370 chr2RHet 2316395 2316467 + 45 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1502 chr2L 20066304 20066372 + 45 NA promoter-TSS (FBgn0045064) protein_coding-promoter-TSS (FBgn0045064) -32 FBgn0045064 FBgn0045064 FBtr0331184 bwa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2400 chr2R 8620077 8620147 + 45 NA intron (FBgn0261545, intron 2 of 8) protein_coding-intron (FBgn0261545, intron 2 of 7) 20329 FBgn0033773 FBgn0033773 FBtr0087865 mos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1745 chr2L 22078766 22078820 + 45 NA promoter-TSS (FBgn0032971) protein_coding-promoter-TSS (FBgn0032971) -879 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1595 chr2L 21051955 21052032 + 45 NA promoter-TSS (FBgn0250867) protein_coding-promoter-TSS (FBgn0250867) -1040 FBgn0010395 FBgn0010395 FBtr0081461 betaInt-nu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1712 chr2L 21980117 21980180 + 45 NA Intergenic Intergenic 12785 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4725 chr3R 2521721 2521778 + 45 NA exon (FBgn0004781, exon 2 of 2) protein_coding-exon (FBgn0004781, exon 2 of 2) 244 FBgn0004781 FBgn0004781 FBtr0081693 Ccp84Ac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2949 chr2R 17735950 17736016 + 45 NA promoter-TSS (FBgn0050406) tRNA-promoter-TSS (FBgn0050406) 0 FBgn0050406 FBgn0050406 FBtr0071736 tRNA:CR30406 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1443 chr2L 19453572 19453628 + 45 NA promoter-TSS (FBgn0032785) protein_coding-promoter-TSS (FBgn0032785) -110 FBgn0003732 FBgn0003732 FBtr0081287 Top2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2080 chr2R 3739970 3740057 + 45 NA intron (FBgn0085390, intron 5 of 19) protein_coding-intron (FBgn0085390, intron 7 of 20) 20142 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_107 chr2L 1391421 1391491 + 45 NA exon (FBgn0002543, exon 8 of 14) protein_coding-exon (FBgn0002543, exon 8 of 14) 23367 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1266 chr2L 17320604 17320663 + 45 NA Intergenic Intergenic -8813 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4134 chr3L 15101206 15101284 + 45 NA exon (FBgn0264702, exon 2 of 2) ncRNA-exon (FBgn0264702, exon 2 of 2) 790 FBgn0264702 FBgn0264702 FBtr0333936 CR43971 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2211 chr2R 5545119 5545173 + 45 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) -3584 FBgn0011921 FBgn0011921 FBtr0088465 tRNA:M3:46A tRNA Nup98-S2-pascual-garcia2017_R1_peak_6668 chr4 1234432 1234497 + 45 NA promoter-TSS (FBgn0027101) protein_coding-promoter-TSS (FBgn0027101) -25 FBgn0027101 FBgn0027101 FBtr0100404 Dyrk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2579 chr2R 11373119 11373186 + 44 NA TTS (FBgn0034022) protein_coding-TTS (FBgn0034022) -2814 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4060 chr3L 13820085 13820194 + 44 NA Intergenic Intergenic -10763 FBgn0262813 FBgn0262813 FBtr0306058 CG43184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3034 chr2R 19273319 19273373 + 44 NA promoter-TSS (FBgn0034858) protein_coding-promoter-TSS (FBgn0034858) -368 FBgn0050414 FBgn0050414 FBtr0302316 CG30414 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5261 chr3R 10998401 10998477 + 44 NA TTS (FBgn0038294) protein_coding-TTS (FBgn0038294) 7553 FBgn0038294 FBgn0038294 FBtr0306642 Mf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_696 chr2L 10774260 10774362 + 44 NA exon (FBgn0051869, exon 7 of 7) protein_coding-exon (FBgn0051869, exon 7 of 7) 3443 FBgn0032299 FBgn0032299 FBtr0080136 CG17127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5766 chr3R 16927882 16927936 + 44 NA promoter-TSS (FBgn0038855) protein_coding-promoter-TSS (FBgn0038855) -12 FBgn0038855 FBgn0038855 FBtr0084008 CG5745 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4235 chr3L 16746926 16746983 + 44 NA Intergenic Intergenic -1635 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1935 chr2R 543415 543584 + 44 NA Intergenic Intergenic -15863 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3443 chr3L 774714 774780 + 44 NA Intergenic Intergenic 4384 FBgn0052481 FBgn0052481 FBtr0072580 tRNA:CR32481 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3216 chr2RHet 984279 984397 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4970 chr3R 6267701 6267795 + 44 NA Intergenic Intergenic 7237 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5186 chr3R 9431941 9432027 + 44 NA Intergenic Intergenic 1559 FBgn0261818 FBgn0261818 FBtr0303306 CG42760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_830 chr2L 12815060 12815133 + 44 NA Intergenic Intergenic -6756 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_56 chr2L 959969 960041 + 44 NA Intergenic Intergenic 37212 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1066 chr2L 15319142 15319248 + 44 NA promoter-TSS (FBgn0041103) protein_coding-promoter-TSS (FBgn0041103) -294 FBgn0041103 FBgn0041103 FBtr0300021 nht protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2720 chr2R 13812534 13812594 + 44 NA exon (FBgn0011589, exon 17 of 17) protein_coding-exon (FBgn0011589, exon 17 of 17) 29981 FBgn0034284 FBgn0034284 FBtr0086803 CG14491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6658 chr4 1024849 1024991 + 44 NA exon (FBgn0019650, exon 6 of 9) protein_coding-exon (FBgn0019650, exon 6 of 9) 14569 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4136 chr3L 15140675 15140749 + 44 NA intron (FBgn0036485, intron 1 of 4) protein_coding-intron (FBgn0036485, intron 1 of 4) -2894 FBgn0036485 FBgn0036485 FBtr0331831 FucTA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3264 chr2RHet 1866088 1866154 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1650 chr2L 21729684 21729743 + 44 NA TTS (FBgn0051619) protein_coding-TTS (FBgn0051619) 27753 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3330 chr2RHet 2132626 2132682 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_828 chr2L 12805048 12805173 + 44 NA Intergenic Intergenic 3230 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1126 chr2L 15892617 15892785 + 44 NA exon (FBgn0041183, exon 2 of 9) protein_coding-exon (FBgn0041183, exon 2 of 9) 1110 FBgn0041183 FBgn0041183 FBtr0080811 TepI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2692 chr2R 13279997 13280134 + 44 NA promoter-TSS (FBgn0050232) tRNA-promoter-TSS (FBgn0050232) 345 FBgn0011879 FBgn0011879 FBtr0086908 tRNA:H:56E tRNA Nup98-S2-pascual-garcia2017_R1_peak_4612 chr3R 686379 686437 + 44 NA intron (FBgn0003002, intron 1 of 2) protein_coding-intron (FBgn0003002, intron 1 of 2) 7873 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5934 chr3R 21690459 21690518 + 44 NA Intergenic Intergenic -2334 FBgn0039380 FBgn0039380 FBtr0301147 CG5890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4227 chr3L 16603505 16603559 + 44 NA promoter-TSS (FBgn0002284) protein_coding-promoter-TSS (FBgn0002284) -14 FBgn0002284 FBgn0002284 FBtr0075360 Pros26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6817 chrU 2656664 2656728 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4650 chr3R 1259326 1259404 + 44 NA intron (FBgn0037326, intron 2 of 7) protein_coding-intron (FBgn0037326, intron 2 of 7) -6386 FBgn0037325 FBgn0037325 FBtr0078793 CG12147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1062 chr2L 15245356 15245410 + 44 NA intron (FBgn0028516, intron 3 of 8) protein_coding-intron (FBgn0028516, intron 3 of 8) 535 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5311 chr3R 11636209 11636338 + 44 NA intron (FBgn0026616, intron 1 of 4) protein_coding-intron (FBgn0026616, intron 1 of 4) 6299 FBgn0026616 FBgn0026616 FBtr0083179 alpha-Man-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5216 chr3R 9913759 9913905 + 44 NA TTS (FBgn0038197) protein_coding-TTS (FBgn0038197) -2664 FBgn0038198 FBgn0038198 FBtr0082889 Npc2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3118 chr2R 20751099 20751171 + 44 NA Intergenic Intergenic -6455 FBgn0050420 FBgn0050420 FBtr0072382 Atf-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_957 chr2L 14472766 14472820 + 44 NA Intergenic Intergenic -18069 FBgn0005771 FBgn0005771 FBtr0080643 noc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1492 chr2L 19995626 19995738 + 44 NA intron (FBgn0264443, intron 2 of 5) protein_coding-intron (FBgn0264443, intron 2 of 5) 16853 FBgn0263611 FBgn0263611 FBtr0309974 CR43620 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3010 chr2R 18886315 18886481 + 44 NA promoter-TSS (FBgn0034808) protein_coding-promoter-TSS (FBgn0034808) 8 FBgn0034808 FBgn0034808 FBtr0071988 CG9896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6815 chrU 2647994 2648128 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6653 chr4 1017158 1017300 + 44 NA exon (FBgn0019650, exon 3 of 9) protein_coding-exon (FBgn0019650, exon 3 of 9) 6878 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5678 chr3R 15898606 15898812 + 44 NA Intergenic Intergenic 9463 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3109 chr2R 20604386 20604448 + 44 NA intron (FBgn0053988, intron 2 of 5) protein_coding-intron (FBgn0053988, intron 2 of 5) 19763 FBgn0053988 FBgn0053988 FBtr0100033 CG33988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_386 chr2L 5712778 5712861 + 44 NA exon (FBgn0031730, exon 4 of 5) protein_coding-exon (FBgn0031730, exon 4 of 5) 860 FBgn0031730 FBgn0031730 FBtr0302950 CG7236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1770 chr2L 22222636 22222794 + 44 NA Intergenic Intergenic -3436 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2076 chr2R 3595420 3595497 + 44 NA intron (FBgn0003733, intron 5 of 14) protein_coding-intron (FBgn0003733, intron 4 of 13) 1584 FBgn0003733 FBgn0003733 FBtr0088938 tor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1727 chr2L 22030869 22031015 + 44 NA Intergenic Intergenic -6918 FBgn0084001 FBgn0084001 FBtr0332199 CG41434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2084 chr2R 3803998 3804060 + 44 NA promoter-TSS (FBgn0015509) protein_coding-promoter-TSS (FBgn0015509) -61 FBgn0033232 FBgn0033232 FBtr0088888 CG12159 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1607 chr2L 21207485 21207557 + 44 NA exon (FBgn0026255, exon 5 of 12) protein_coding-exon (FBgn0026255, exon 5 of 12) 1001 FBgn0026255 FBgn0026255 FBtr0081476 clumsy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3913 chr3L 11356510 11356573 + 44 NA exon (FBgn0036155, exon 2 of 3) protein_coding-exon (FBgn0036155, exon 2 of 3) 1444 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_869 chr2L 13461453 13461555 + 44 NA promoter-TSS (FBgn0263354) protein_coding-promoter-TSS (FBgn0263354) -270 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6401 chr3R 26260231 26260312 + 44 NA TTS (FBgn0039770) protein_coding-TTS (FBgn0039770) 2485 FBgn0039769 FBgn0039769 FBtr0085644 CG15534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3915 chr3L 11359741 11359840 + 44 NA Intergenic Intergenic -1805 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5662 chr3R 15719585 15719721 + 44 NA exon (FBgn0038744, exon 2 of 9) protein_coding-exon (FBgn0038744, exon 2 of 9) 3083 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3921 chr3L 11464231 11464312 + 44 NA Intergenic Intergenic -2120 FBgn0028667 FBgn0028667 FBtr0076090 Vha16-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3440 chr3L 712171 712250 + 44 NA promoter-TSS (FBgn0035159) protein_coding-promoter-TSS (FBgn0035159) -360 FBgn0035159 FBgn0035159 FBtr0072602 CG13896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3748 chr3L 7747887 7747957 + 44 NA exon (FBgn0035817, exon 1 of 1) protein_coding-exon (FBgn0035817, exon 1 of 1) 413 FBgn0035817 FBgn0035817 FBtr0076810 CG7409 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_542 chr2L 8640182 8640236 + 44 NA intron (FBgn0011259, intron 4 of 20) protein_coding-intron (FBgn0011259, intron 4 of 21) 20181 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_574 chr2L 8795657 8795778 + 44 NA Intergenic Intergenic -13223 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4509 chr3L 23868223 23868293 + 44 NA intron (FBgn0058470, intron 9 of 12) protein_coding-intron (FBgn0058470, intron 9 of 12) 7984 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5712 chr3R 16193384 16193438 + 44 NA Intergenic Intergenic 7381 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3343 chr2RHet 2200953 2201092 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3678 chr3L 6745461 6745516 + 44 NA promoter-TSS (FBgn0035714) protein_coding-promoter-TSS (FBgn0035714) -102 FBgn0035713 FBgn0035713 FBtr0076951 CG10107 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4703 chr3R 2161989 2162055 + 44 NA exon (FBgn0037429, exon 3 of 4) protein_coding-exon (FBgn0037429, exon 3 of 4) 936 FBgn0037429 FBgn0037429 FBtr0301493 Osi19 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3070 chr2R 19890591 19890647 + 44 NA exon (FBgn0053519, exon 18 of 35) protein_coding-exon (FBgn0053519, exon 18 of 35) -8046 FBgn0034951 FBgn0034951 FBtr0072201 CG3860 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4138 chr3L 15189522 15189579 + 44 NA Intergenic Intergenic -11394 FBgn0036490 FBgn0036490 FBtr0075644 CG6888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6494 chr3R 27299058 27299132 + 44 NA Intergenic Intergenic 10028 FBgn0039850 FBgn0039850 FBtr0085789 CG11333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1790 chr2L 22344293 22344359 + 44 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) 3704 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4289 chr3L 17468144 17468200 + 44 NA promoter-TSS (FBgn0036728) protein_coding-promoter-TSS (FBgn0036728) 23 FBgn0036728 FBgn0036728 FBtr0333691 CG7580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1839 chr2L 22627837 22627891 + 44 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 16663 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_586 chr2L 8837284 8837353 + 44 NA Intergenic Intergenic 11693 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_615 chr2L 8979846 8979952 + 44 NA promoter-TSS (FBgn0040963) protein_coding-promoter-TSS (FBgn0040963) -760 FBgn0040963 FBgn0040963 FBtr0079760 CG18662 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1692 chr2L 21887734 21887844 + 44 NA Intergenic Intergenic -6438 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1012 chr2L 14766766 14766840 + 44 NA exon (FBgn0028868, exon 1 of 1) protein_coding-exon (FBgn0028868, exon 1 of 1) 895 FBgn0028868 FBgn0028868 FBtr0080672 CG4701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_98 chr2L 1348958 1349030 + 44 NA Intergenic Intergenic 3875 FBgn0031332 FBgn0031332 FBtr0077948 CG5556 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6697 chrU 104300 104363 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3126 chr2R 20964270 20964379 + 44 NA promoter-TSS (FBgn0050199) tRNA-promoter-TSS (FBgn0050199) 36 FBgn0050199 FBgn0050199 FBtr0072446 tRNA:CR30199 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4543 chr3LHet 13012 13071 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4657 chr3R 1353354 1353408 + 44 NA promoter-TSS (FBgn0010051) protein_coding-promoter-TSS (FBgn0010051) 80 FBgn0010051 FBgn0010051 FBtr0078687 Itp-r83A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1980 chr2R 1351797 1351851 + 44 NA Intergenic Intergenic 31517 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4353 chr3L 18231961 18232041 + 44 NA Intergenic Intergenic -13187 FBgn0036783 FBgn0036783 FBtr0075129 CheA75a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4029 chr3L 13276806 13276860 + 44 NA TTS (FBgn0262622) protein_coding-TTS (FBgn0262622) 763 FBgn0264514 FBgn0264514 FBtr0333132 CR43913 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_777 chr2L 12182300 12182366 + 44 NA intron (FBgn0000114, intron 1 of 8) protein_coding-intron (FBgn0000114, intron 1 of 8) -4581 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2024 chr2R 2478700 2478780 + 44 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) 9743 FBgn0033076 FBgn0033076 FBtr0305958 CG15233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3227 chr2RHet 1300701 1300866 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5287 chr3R 11400692 11400753 + 44 NA Intergenic Intergenic -22228 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4485 chr3L 23590147 23590201 + 44 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 41149 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6719 chrU 218123 218197 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3203 chr2RHet 728957 729011 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3187 chr2RHet 578627 578706 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1765 chr2L 22207390 22207528 + 44 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 6806 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4394 chr3L 19635891 19635974 + 44 NA promoter-TSS (FBgn0036897) protein_coding-promoter-TSS (FBgn0036897) -16 FBgn0036897 FBgn0036897 FBtr0306354 CG8786 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4187 chr3L 16016304 16016384 + 44 NA promoter-TSS (FBgn0044028) protein_coding-promoter-TSS (FBgn0044028) -236 FBgn0044028 FBgn0044028 FBtr0075435 Notum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6185 chr3R 24061048 24061113 + 44 NA exon (FBgn0085383, exon 6 of 9) protein_coding-exon (FBgn0085383, exon 6 of 9) 28264 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6696 chrU 86870 87006 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4102 chr3L 14450151 14450299 + 44 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) 46499 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6890 chrUextra 601552 601632 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2682 chr2R 13101588 13101668 + 44 NA Intergenic Intergenic 8915 FBgn0262882 FBgn0262882 FBtr0306290 CG43237 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3293 chr2RHet 1922718 1922880 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4954 chr3R 5894968 5895043 + 44 NA TTS (FBgn0053784) protein_coding-TTS (FBgn0053784) 1378 FBgn0053784 FBgn0053784 FBtr0091785 CG33784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_241 chr2L 3657981 3658098 + 44 NA Intergenic Intergenic -4706 FBgn0085369 FBgn0085369 FBtr0302391 CG34340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6908 chrUextra 6346667 6346722 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6525 chr3R 27678238 27678299 + 44 NA intron (FBgn0011224, intron 15 of 16) protein_coding-intron (FBgn0011224, intron 12 of 13) 26702 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4500 chr3L 23761020 23761096 + 44 NA Intergenic Intergenic -16273 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7092 chrX 7201736 7201844 + 44 NA promoter-TSS (FBgn0024250) protein_coding-promoter-TSS (FBgn0024250) -184 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2991 chr2R 18565947 18566080 + 44 NA Intergenic Intergenic 7756 FBgn0034763 FBgn0034763 FBtr0071868 RYBP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6611 chr4 551584 551654 + 44 NA exon (FBgn0004607, exon 7 of 14) protein_coding-exon (FBgn0004607, exon 7 of 14) 26861 FBgn0264618 FBgn0264618 FBtr0333707 CR43958 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_561 chr2L 8757632 8757693 + 44 NA Intergenic Intergenic 5357 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3485 chr3L 1709300 1709354 + 44 NA intron (FBgn0035260, intron 2 of 3) protein_coding-intron (FBgn0035260, intron 2 of 3) -6920 FBgn0035258 FBgn0035258 FBtr0072802 CG13931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3335 chr2RHet 2142253 2142359 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4473 chr3L 23391659 23391716 + 44 NA Intergenic Intergenic 59261 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3544 chr3L 3096323 3096455 + 44 NA promoter-TSS (FBgn0052287) tRNA-promoter-TSS (FBgn0052287) 20 FBgn0052287 FBgn0052287 FBtr0073020 tRNA:CR32287 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4680 chr3R 1865514 1865589 + 44 NA Intergenic Intergenic 12062 FBgn0037397 FBgn0037397 FBtr0307114 CR1075 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2668 chr2R 12727381 12727435 + 44 NA Intergenic Intergenic 5135 FBgn0026754 FBgn0026754 FBtr0087076 Ugt37c1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3084 chr2R 20209557 20209613 + 44 NA Intergenic Intergenic 12244 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4922 chr3R 5148578 5148640 + 44 NA TTS (FBgn0037675) protein_coding-TTS (FBgn0037675) 1117 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6637 chr4 938250 938308 + 44 NA exon (FBgn0023213, exon 11 of 16) protein_coding-exon (FBgn0023213, exon 11 of 16) 10463 FBgn0263093 FBgn0263093 FBtr0307112 CR43361 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1804 chr2L 22483844 22483898 + 44 NA Intergenic Intergenic 11389 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_980 chr2L 14601420 14601487 + 44 NA exon (FBgn0003016, exon 10 of 11) protein_coding-exon (FBgn0003016, exon 10 of 11) 1779 FBgn0028910 FBgn0028910 FBtr0080647 tRNA:P:35Bc tRNA Nup98-S2-pascual-garcia2017_R1_peak_1335 chr2L 17996808 17996889 + 44 NA Intergenic Intergenic 6430 FBgn0051742 FBgn0051742 FBtr0081025 CG31742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1051 chr2L 15178147 15178242 + 44 NA exon (FBgn0028888, exon 2 of 6) protein_coding-exon (FBgn0028888, exon 2 of 6) 22215 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2348 chr2R 7673730 7673794 + 44 NA intron (FBgn0033652, intron 1 of 3) protein_coding-intron (FBgn0033652, intron 1 of 3) 3236 FBgn0033651 FBgn0033651 FBtr0088065 Tango3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_343 chr2L 5043180 5043241 + 43 NA promoter-TSS (FBgn0031674) protein_coding-promoter-TSS (FBgn0031674) -52 FBgn0031673 FBgn0031673 FBtr0333539 CG31650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2908 chr2R 16985600 16985674 + 43 NA promoter-TSS (FBgn0011824) protein_coding-promoter-TSS (FBgn0011824) 20 FBgn0085425 FBgn0085425 FBtr0112645 CG34396 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4243 chr3L 16847917 16848001 + 43 NA intron (FBgn0003410, intron 1 of 1) protein_coding-intron (FBgn0003410, intron 1 of 1) -1060 FBgn0003410 FBgn0003410 FBtr0075333 sina protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6988 chrX 1398301 1398468 + 43 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 1 of 10) 3458 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2192 chr2R 5226547 5226650 + 43 NA intron (FBgn0033403, intron 2 of 3) protein_coding-intron (FBgn0033403, intron 2 of 3) -6256 FBgn0033404 FBgn0033404 FBtr0088503 Or45a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1949 chr2R 820971 821025 + 43 NA Intergenic Intergenic -16174 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5167 chr3R 9134999 9135068 + 43 NA promoter-TSS (FBgn0052473) protein_coding-promoter-TSS (FBgn0052473) 110 FBgn0052473 FBgn0052473 FBtr0082744 CG32473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5530 chr3R 14068390 14068464 + 43 NA promoter-TSS (FBgn0020238) protein_coding-promoter-TSS (FBgn0020238) 174 FBgn0020238 FBgn0020238 FBtr0083567 14-3-3epsilon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4529 chr3L 24118463 24118520 + 43 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 51162 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2563 chr2R 11103669 11103723 + 43 NA promoter-TSS (FBgn0034000) protein_coding-promoter-TSS (FBgn0034000) -20 FBgn0034000 FBgn0034000 FBtr0087366 CG11808 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_115 chr2L 1455862 1455916 + 43 NA Intergenic Intergenic 13163 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1199 chr2L 16719880 16719936 + 43 NA promoter-TSS (FBgn0000409) protein_coding-promoter-TSS (FBgn0000409) 34 FBgn0000409 FBgn0000409 FBtr0080889 Cyt-c-p protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5963 chr3R 21910289 21910352 + 43 NA intron (FBgn0039411, intron 4 of 10) protein_coding-intron (FBgn0039411, intron 4 of 10) 14113 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6010 chr3R 22392622 22392774 + 43 NA exon (FBgn0263289, exon 7 of 23) protein_coding-exon (FBgn0263289, exon 7 of 23) 30626 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_707 chr2L 11030772 11030833 + 43 NA exon (FBgn0032330, exon 4 of 7) protein_coding-exon (FBgn0032330, exon 4 of 7) -4047 FBgn0040967 FBgn0040967 FBtr0080160 CG18666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6952 chrUextra 24282187 24282244 + 43 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_334 chr2L 4818222 4818276 + 43 NA promoter-TSS (FBgn0031631) protein_coding-promoter-TSS (FBgn0031631) -4 FBgn0031631 FBgn0031631 FBtr0077416 CG3225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2676 chr2R 12883926 12884054 + 43 NA TTS (FBgn0004580) protein_coding-TTS (FBgn0004580) 2109 FBgn0050461 FBgn0050461 FBtr0100252 CG30461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_134 chr2L 1601188 1601242 + 43 NA exon (FBgn0261509, exon 4 of 11) protein_coding-exon (FBgn0261509, exon 4 of 11) 9910 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6973 chrUextra 28734924 28734981 + 43 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6381 chr3R 25739289 25739343 + 43 NA TTS (FBgn0051036) protein_coding-TTS (FBgn0051036) 752 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3006 chr2R 18812252 18812310 + 43 NA promoter-TSS (FBgn0010660) protein_coding-promoter-TSS (FBgn0010660) -26 FBgn0010660 FBgn0010660 FBtr0071996 Nup214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3765 chr3L 8180022 8180114 + 43 NA promoter-TSS (FBgn0035850) protein_coding-promoter-TSS (FBgn0035850) -27 FBgn0035850 FBgn0035850 FBtr0321321 Atg18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2272 chr2R 6451709 6451794 + 42 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 6358 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2606 chr2R 11810062 11810116 + 42 NA promoter-TSS (FBgn0264089) protein_coding-promoter-TSS (FBgn0264089) -466 FBgn0264089 FBgn0264089 FBtr0330733 sli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6829 chrU 3535658 3535712 + 42 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2907 chr2R 16971837 16971891 + 42 NA promoter-TSS (FBgn0003748) protein_coding-promoter-TSS (FBgn0003748) 6643 FBgn0034585 FBgn0034585 FBtr0071640 CG4030 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3999 chr3L 12743158 12743243 + 42 NA promoter-TSS (FBgn0036305) protein_coding-promoter-TSS (FBgn0036305) -131 FBgn0036305 FBgn0036305 FBtr0075921 CG10984 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3419 chr3L 614633 614693 + 42 NA TTS (FBgn0261636) protein_coding-TTS (FBgn0261636) 1983 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6345 chr3R 25524839 25524955 + 42 NA Intergenic Intergenic 6584 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6864 chrUextra 196461 196542 + 42 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5637 chr3R 15458489 15458543 + 42 NA promoter-TSS (FBgn0038720) protein_coding-promoter-TSS (FBgn0038720) -2155 FBgn0083974 FBgn0083974 FBtr0110954 CG34138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2863 chr2R 16123938 16124013 + 42 NA exon (FBgn0034485, exon 1 of 5) protein_coding-exon (FBgn0034485, exon 1 of 5) 235 FBgn0034485 FBgn0034485 FBtr0086315 CG11099 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5919 chr3R 21044115 21044174 + 42 NA promoter-TSS (FBgn0051103) protein_coding-promoter-TSS (FBgn0051103) -925 FBgn0051103 FBgn0051103 FBtr0113389 CG31103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3015 chr2R 18933721 18933806 + 42 NA promoter-TSS (FBgn0003900) protein_coding-promoter-TSS (FBgn0003900) -86 FBgn0003900 FBgn0003900 FBtr0100130 twi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6191 chr3R 24173780 24173844 + 42 NA Intergenic Intergenic -4152 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6830 chrU 3535782 3535860 + 42 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5975 chr3R 22096500 22096570 + 42 NA intron (FBgn0039420, intron 7 of 7) protein_coding-intron (FBgn0039420, intron 7 of 7) 8151 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6361 chr3R 25558224 25558278 + 42 NA exon (FBgn0039688, exon 9 of 9) protein_coding-exon (FBgn0039688, exon 9 of 9) 4291 FBgn0027583 FBgn0027583 FBtr0085544 CG7601 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4300 chr3L 17583545 17583652 + 42 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -24336 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1865 chr2L 22714129 22714199 + 42 NA Intergenic Intergenic 22133 FBgn0262947 FBgn0262947 FBtr0306552 CG43266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2913 chr2R 17159898 17159974 + 42 NA intron (FBgn0085426, intron 4 of 8) protein_coding-intron (FBgn0085426, intron 4 of 8) -4852 FBgn0050393 FBgn0050393 FBtr0071620 CG30393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7048 chrX 4448225 4448303 + 42 NA promoter-TSS (FBgn0029715) protein_coding-promoter-TSS (FBgn0029715) -38 FBgn0029715 FBgn0029715 FBtr0070698 CG11444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1054 chr2L 15200136 15200190 + 42 NA exon (FBgn0028888, exon 1 of 6) protein_coding-exon (FBgn0028888, exon 1 of 6) 246 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5285 chr3R 11394079 11394149 + 42 NA Intergenic Intergenic -15620 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4654 chr3R 1319137 1319199 + 42 NA exon (FBgn0051547, exon 3 of 10) protein_coding-exon (FBgn0051547, exon 3 of 10) 5568 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_583 chr2L 8825349 8825409 + 42 NA promoter-TSS (FBgn0029123) protein_coding-promoter-TSS (FBgn0029123) -246 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1759 chr2L 22192586 22192644 + 42 NA intron (FBgn0259683, intron 5 of 6) protein_coding-intron (FBgn0259683, intron 5 of 6) 17200 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3175 chr2RHet 493667 493723 + 42 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6247 chr3R 24602104 24602182 + 42 NA Intergenic Intergenic -13196 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3882 chr3L 10700441 10700504 + 42 NA Intergenic Intergenic -10495 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4285 chr3L 17346043 17346133 + 42 NA promoter-TSS (FBgn0036714) protein_coding-promoter-TSS (FBgn0036714) 569 FBgn0036714 FBgn0036714 FBtr0075215 CG7692 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4176 chr3L 15987959 15988026 + 42 NA exon (FBgn0036556, exon 6 of 6) protein_coding-exon (FBgn0036556, exon 6 of 6) 6656 FBgn0259824 FBgn0259824 FBtr0330161 Hip14 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4421 chr3L 20791694 20791769 + 42 NA promoter-TSS (FBgn0037024) protein_coding-promoter-TSS (FBgn0037024) -51 FBgn0037024 FBgn0037024 FBtr0078253 CG4365 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6663 chr4 1068087 1068141 + 42 NA exon (FBgn0264607, exon 8 of 14) protein_coding-exon (FBgn0264607, exon 8 of 14) 6215 FBgn0264607 FBgn0264607 FBtr0300379 CaMKII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1937 chr2R 544628 544717 + 42 NA Intergenic Intergenic -14690 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2912 chr2R 17141023 17141093 + 42 NA Intergenic Intergenic -2261 FBgn0085426 FBgn0085426 FBtr0305983 Rgk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6727 chrU 251316 251379 + 42 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_738 chr2L 11516753 11516817 + 42 NA promoter-TSS (FBgn0032364) protein_coding-promoter-TSS (FBgn0032364) 250 FBgn0032363 FBgn0032363 FBtr0080247 CG6509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6068 chr3R 23051910 23051986 + 42 NA Intergenic Intergenic 2296 FBgn0261995 FBgn0261995 FBtr0303825 CG42813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12 chr2L 285753 285812 + 42 NA promoter-TSS (FBgn0031245) protein_coding-promoter-TSS (FBgn0031245) -2501 FBgn0031244 FBgn0031244 FBtr0078137 CG11601 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6884 chrUextra 477459 477561 + 42 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_35 chr2L 759352 759441 + 42 NA exon (FBgn0031275, exon 9 of 10) protein_coding-exon (FBgn0031275, exon 9 of 10) 8787 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_339 chr2L 4912114 4912182 + 42 NA intron (FBgn0041150, intron 2 of 9) protein_coding-intron (FBgn0041150, intron 3 of 10) 3348 FBgn0041150 FBgn0041150 FBtr0310622 hoe1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4596 chr3R 279188 279250 + 42 NA promoter-TSS (FBgn0051522) protein_coding-promoter-TSS (FBgn0051522) 559 FBgn0263620 FBgn0263620 FBtr0309986 CR43629 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1987 chr2R 1598998 1599072 + 42 NA intron (FBgn0000099, intron 1 of 4) protein_coding-intron (FBgn0000099, intron 4 of 7) 5519 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1758 chr2L 22188156 22188210 + 42 NA Intergenic Intergenic 12768 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1433 chr2L 19314459 19314551 + 42 NA Intergenic Intergenic 14199 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1778 chr2L 22276290 22276348 + 42 NA Intergenic Intergenic 26441 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7265 chrX 20406418 20406514 + 42 NA intron (FBgn0259162, intron 1 of 5) protein_coding-intron (FBgn0259162, intron 1 of 5) -3058 FBgn0259162 FBgn0259162 FBtr0332385 RunxB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4894 chr3R 4688601 4688743 + 42 NA promoter-TSS (FBgn0053551) tRNA-promoter-TSS (FBgn0053551) 17 FBgn0053551 FBgn0053551 FBtr0091521 tRNA:R:85Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4570 chr3LHet 1270632 1270686 + 42 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1111 chr2L 15631289 15631381 + 42 NA exon (FBgn0028518, exon 3 of 4) protein_coding-exon (FBgn0028518, exon 3 of 4) 1251 FBgn0028518 FBgn0028518 FBtr0080755 CG18480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3912 chr3L 11337082 11337165 + 42 NA Intergenic Intergenic 20862 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_859 chr2L 13309807 13309874 + 42 NA exon (FBgn0264308, exon 2 of 6) protein_coding-exon (FBgn0264308, exon 2 of 6) -3085 FBgn0264301 FBgn0264301 FBtr0331506 CG43779 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2187 chr2R 5182305 5182368 + 42 NA promoter-TSS (FBgn0028408) protein_coding-promoter-TSS (FBgn0028408) 1222 FBgn0028408 FBgn0028408 FBtr0112930 Drep-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1475 chr2L 19762114 19762185 + 41 NA exon (FBgn0032820, exon 3 of 3) protein_coding-exon (FBgn0032820, exon 3 of 3) 1985 FBgn0032820 FBgn0032820 FBtr0081322 fbp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7076 chrX 6182012 6182100 + 41 NA promoter-TSS (FBgn0029857) protein_coding-promoter-TSS (FBgn0029857) -29 FBgn0026015 FBgn0026015 FBtr0070930 Top3beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2385 chr2R 8222480 8222595 + 41 NA promoter-TSS (FBgn0033715) protein_coding-promoter-TSS (FBgn0033715) 34 FBgn0050251 FBgn0050251 FBtr0087961 tRNA:CR30251 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7067 chrX 5793994 5794101 + 41 NA promoter-TSS (FBgn0000042) protein_coding-promoter-TSS (FBgn0000042) -847 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3412 chr3L 608144 608240 + 41 NA Intergenic Intergenic -1623 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5874 chr3R 19603690 19603914 + 41 NA exon (FBgn0039120, exon 3 of 9) protein_coding-exon (FBgn0039120, exon 3 of 9) 3329 FBgn0039120 FBgn0039120 FBtr0304567 Nup98-96 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2603 chr2R 11792726 11792784 + 41 NA intron (FBgn0264089, intron 1 of 20) protein_coding-intron (FBgn0264089, intron 1 of 19) -8823 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5329 chr3R 11896847 11896954 + 41 NA exon (FBgn0026059, exon 15 of 18) protein_coding-exon (FBgn0026059, exon 15 of 18) -3666 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5531 chr3R 14084059 14084126 + 41 NA TTS (FBgn0261019) protein_coding-TTS (FBgn0261019) 2840 FBgn0261019 FBgn0261019 FBtr0299938 moi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5956 chr3R 21834283 21834338 + 41 NA Intergenic Intergenic -2305 FBgn0002732 FBgn0002732 FBtr0084956 malpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3080 chr2R 20178815 20178869 + 41 NA TTS (FBgn0005636) protein_coding-TTS (FBgn0005636) -2976 FBgn0263546 FBgn0263546 FBtr0309662 mir-4985 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6758 chrU 1091649 1091716 + 41 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5885 chr3R 19748740 19748820 + 41 NA promoter-TSS (FBgn0051141) protein_coding-promoter-TSS (FBgn0051141) -85 FBgn0016754 FBgn0016754 FBtr0330380 sba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7064 chrX 5792699 5792824 + 41 NA Intergenic Intergenic -2133 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_537 chr2L 8624506 8624594 + 41 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 4522 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2765 chr2R 14527227 14527314 + 41 NA promoter-TSS (FBgn0011868) tRNA-promoter-TSS (FBgn0011868) 31 FBgn0011868 FBgn0011868 FBtr0086659 tRNA:G3:55E tRNA Nup98-S2-pascual-garcia2017_R1_peak_160 chr2L 2009521 2009575 + 41 NA promoter-TSS (FBgn0051944) tRNA-promoter-TSS (FBgn0051944) 10 FBgn0051944 FBgn0051944 FBtr0077819 tRNA:CR31944 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6759 chrU 1092290 1092405 + 41 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1278 chr2L 17389244 17389343 + 41 NA promoter-TSS (FBgn0020503) protein_coding-promoter-TSS (FBgn0020503) 4278 FBgn0020503 FBgn0020503 FBtr0332452 CLIP-190 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6996 chrX 1512246 1512308 + 41 NA promoter-TSS (FBgn0025390) protein_coding-promoter-TSS (FBgn0025390) -89 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2105 chr2R 3955429 3955492 + 41 NA promoter-TSS (FBgn0020279) protein_coding-promoter-TSS (FBgn0020279) 0 FBgn0020279 FBgn0020279 FBtr0100575 lig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_877 chr2L 13541266 13541328 + 41 NA promoter-TSS (FBgn0028941) protein_coding-promoter-TSS (FBgn0028941) 546 FBgn0028942 FBgn0028942 FBtr0080507 CG16852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_247 chr2L 3720968 3721042 + 41 NA promoter-TSS (FBgn0003386) protein_coding-promoter-TSS (FBgn0003386) 2820 FBgn0003386 FBgn0003386 FBtr0289989 Shaw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1752 chr2L 22093748 22093802 + 40 NA Intergenic Intergenic 10626 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1699 chr2L 21955027 21955098 + 40 NA Intergenic Intergenic 37871 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2239 chr2R 6047353 6047413 + 40 NA promoter-TSS (FBgn0033495) protein_coding-promoter-TSS (FBgn0033495) -1294 FBgn0033495 FBgn0033495 FBtr0088370 CG12214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6845 chrU 6110522 6110576 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5260 chr3R 10973325 10973427 + 40 NA promoter-TSS (FBgn0038293) protein_coding-promoter-TSS (FBgn0038293) -547 FBgn0038293 FBgn0038293 FBtr0083037 CG6904 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6866 chrUextra 197483 197748 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3359 chr2RHet 2262567 2262744 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_485 chr2L 7856544 7856598 + 40 NA promoter-TSS (FBgn0040099) protein_coding-promoter-TSS (FBgn0040099) -506 FBgn0040099 FBgn0040099 FBtr0308065 lectin-28C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2665 chr2R 12618955 12619036 + 40 NA promoter-TSS (FBgn0050463) protein_coding-promoter-TSS (FBgn0050463) 6360 FBgn0262564 FBgn0262564 FBtr0304892 CG43104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6491 chr3R 27279647 27279701 + 40 NA exon (FBgn0261988, exon 6 of 13) protein_coding-exon (FBgn0261988, exon 6 of 13) 5917 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3404 chr3L 328045 328141 + 40 NA promoter-TSS (FBgn0052343) protein_coding-promoter-TSS (FBgn0052343) -4 FBgn0261985 FBgn0261985 FBtr0306559 Ptpmeg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_159 chr2L 2009118 2009186 + 40 NA promoter-TSS (FBgn0051943) tRNA-promoter-TSS (FBgn0051943) -3 FBgn0051943 FBgn0051943 FBtr0077818 tRNA:CR31943 tRNA Nup98-S2-pascual-garcia2017_R1_peak_941 chr2L 14386474 14386580 + 40 NA Intergenic Intergenic -5357 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6555 chr3RHet 788630 788738 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6376 chr3R 25669392 25669459 + 40 NA intron (FBgn0039709, intron 2 of 11) protein_coding-intron (FBgn0039709, intron 2 of 11) 2046 FBgn0039709 FBgn0039709 FBtr0085488 Cad99C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2763 chr2R 14423997 14424091 + 40 NA promoter-TSS (FBgn0003067) protein_coding-promoter-TSS (FBgn0003067) -228 FBgn0003067 FBgn0003067 FBtr0086701 Pepck protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7010 chrX 1930569 1930634 + 40 NA promoter-TSS (FBgn0000667) protein_coding-promoter-TSS (FBgn0000667) -102 FBgn0000667 FBgn0000667 FBtr0333802 Actn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4002 chr3L 12808122 12808220 + 40 NA intron (FBgn0260965, intron 1 of 10) protein_coding-intron (FBgn0260965, intron 1 of 9) 817 FBgn0260965 FBgn0260965 FBtr0304053 CG42588 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1641 chr2L 21670972 21671026 + 40 NA promoter-TSS (FBgn0032957) protein_coding-promoter-TSS (FBgn0032957) 6531 FBgn0032957 FBgn0032957 FBtr0085917 CG2225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1394 chr2L 18769354 18769416 + 40 NA intron (FBgn0045852, intron 4 of 6) protein_coding-intron (FBgn0045852, intron 5 of 7) 4452 FBgn0264348 FBgn0264348 FBtr0332018 CR43804 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_157 chr2L 1970652 1970771 + 40 NA promoter-TSS (FBgn0031375) protein_coding-promoter-TSS (FBgn0031375) -3415 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3331 chr2RHet 2133009 2133196 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2268 chr2R 6325414 6325476 + 40 NA promoter-TSS (FBgn0001122) protein_coding-promoter-TSS (FBgn0001122) -552 FBgn0033523 FBgn0033523 FBtr0088314 CG12895 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_108 chr2L 1394946 1395014 + 40 NA intron (FBgn0002543, intron 3 of 13) protein_coding-intron (FBgn0002543, intron 3 of 13) 25469 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5369 chr3R 12279530 12279589 + 40 NA promoter-TSS (FBgn0044826) protein_coding-promoter-TSS (FBgn0044826) -9 FBgn0044826 FBgn0044826 FBtr0083312 Pak3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6773 chrU 1394301 1394355 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4304 chr3L 17587897 17587969 + 40 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) 24492 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6641 chr4 956338 956476 + 40 NA Intergenic Intergenic -1038 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1841 chr2L 22638186 22638256 + 40 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 6306 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5639 chr3R 15483662 15483734 + 40 NA promoter-TSS (FBgn0038725) protein_coding-promoter-TSS (FBgn0038725) -110 FBgn0038725 FBgn0038725 FBtr0083802 CG6184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6957 chrUextra 26243692 26243751 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3081 chr2R 20182785 20182848 + 40 NA promoter-TSS (FBgn0034999) protein_coding-promoter-TSS (FBgn0034999) -225 FBgn0034999 FBgn0034999 FBtr0072269 CG3394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2693 chr2R 13323954 13324108 + 40 NA intron (FBgn0027506, intron 1 of 5) protein_coding-intron (FBgn0027506, intron 1 of 5) -4078 FBgn0034218 FBgn0034218 FBtr0086918 CG18467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3125 chr2R 20963506 20963611 + 40 NA promoter-TSS (FBgn0050198) tRNA-promoter-TSS (FBgn0050198) 30 FBgn0050198 FBgn0050198 FBtr0072445 tRNA:CR30198 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5116 chr3R 8426753 8426823 + 40 NA Intergenic Intergenic 26648 FBgn0005671 FBgn0005671 FBtr0301661 Vha55 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1753 chr2L 22099576 22099650 + 40 NA Intergenic Intergenic 4788 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5104 chr3R 8186075 8186129 + 40 NA exon (FBgn0038017, exon 2 of 3) protein_coding-exon (FBgn0038017, exon 2 of 3) 369 FBgn0038017 FBgn0038017 FBtr0082568 CG4115 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6828 chrU 3535183 3535250 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_770 chr2L 12089485 12089552 + 40 NA Intergenic Intergenic -4140 FBgn0003145 FBgn0003145 FBtr0080299 prd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4927 chr3R 5208284 5208344 + 40 NA intron (FBgn0000723, intron 3 of 13) protein_coding-intron (FBgn0000723, intron 3 of 12) 11954 FBgn0000723 FBgn0000723 FBtr0082054 Fps85D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6517 chr3R 27590436 27590490 + 40 NA promoter-TSS (FBgn0003065) protein_coding-promoter-TSS (FBgn0003065) 25 FBgn0003065 FBgn0003065 FBtr0085859 CG2150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5279 chr3R 11343844 11343923 + 40 NA Intergenic Intergenic -9323 FBgn0038346 FBgn0038346 FBtr0083157 CG14872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4603 chr3R 627894 627948 + 40 NA promoter-TSS (FBgn0260794) protein_coding-promoter-TSS (FBgn0260794) 9862 FBgn0260794 FBgn0260794 FBtr0303915 ctrip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3363 chr2RHet 2273824 2273949 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5149 chr3R 8797416 8797479 + 40 NA intron (FBgn0038098, intron 1 of 9) protein_coding-intron (FBgn0038098, intron 2 of 10) 402 FBgn0038098 FBgn0038098 FBtr0331429 CG7381 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5794 chr3R 17477243 17477300 + 40 NA intron (FBgn0011766, intron 1 of 7) protein_coding-intron (FBgn0011766, intron 1 of 7) 11409 FBgn0038893 FBgn0038893 FBtr0084116 CG6353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2070 chr2R 3361606 3361665 + 40 NA promoter-TSS (FBgn0010548) protein_coding-promoter-TSS (FBgn0010548) 527 FBgn0010548 FBgn0010548 FBtr0310676 Aldh-III protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1442 chr2L 19406578 19406645 + 40 NA intron (FBgn0041789, intron 7 of 8) protein_coding-intron (FBgn0041789, intron 6 of 7) -3043 FBgn0065096 FBgn0065096 FBtr0091700 snmRNA:359 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3341 chr2RHet 2160932 2160997 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2981 chr2R 18260993 18261066 + 39 NA promoter-TSS (FBgn0034720) protein_coding-promoter-TSS (FBgn0034720) -419 FBgn0034720 FBgn0034720 FBtr0113107 Liprin-gamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5904 chr3R 20545332 20545386 + 39 NA promoter-TSS (FBgn0004885) protein_coding-promoter-TSS (FBgn0004885) -275 FBgn0039219 FBgn0039219 FBtr0084745 CG13630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5675 chr3R 15878052 15878106 + 39 NA intron (FBgn0040571, intron 1 of 2) protein_coding-intron (FBgn0040571, intron 1 of 2) 3736 FBgn0040571 FBgn0040571 FBtr0300810 CG17193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5633 chr3R 15434645 15434714 + 39 NA exon (FBgn0038717, exon 5 of 6) protein_coding-exon (FBgn0038717, exon 5 of 6) -1268 FBgn0038718 FBgn0038718 FBtr0083779 CG17752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3303 chr2RHet 1940071 1940183 + 39 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4639 chr3R 1183889 1183944 + 39 NA promoter-TSS (FBgn0250746) protein_coding-promoter-TSS (FBgn0250746) -21 FBgn0250746 FBgn0250746 FBtr0078806 Prosbeta7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5746 chr3R 16655640 16655704 + 39 NA intron (FBgn0027493, intron 1 of 5) protein_coding-intron (FBgn0027493, intron 1 of 4) 665 FBgn0027493 FBgn0027493 FBtr0310504 CG17273 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7133 chrX 9976537 9976593 + 39 NA promoter-TSS (FBgn0030177) protein_coding-promoter-TSS (FBgn0030177) -42 FBgn0052685 FBgn0052685 FBtr0308584 ZAP3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5808 chr3R 17711556 17711628 + 39 NA promoter-TSS (FBgn0038915) protein_coding-promoter-TSS (FBgn0038915) -320 FBgn0038915 FBgn0038915 FBtr0084152 CG17819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1672 chr2L 21828729 21828816 + 39 NA exon (FBgn0003866, exon 1 of 3) protein_coding-exon (FBgn0003866, exon 1 of 3) 179 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4158 chr3L 15502638 15502700 + 39 NA TTS (FBgn0004052) protein_coding-TTS (FBgn0004052) 124 FBgn0028377 FBgn0028377 FBtr0091756 gdl-ORF39 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5676 chr3R 15884846 15884903 + 39 NA exon (FBgn0038772, exon 3 of 3) protein_coding-exon (FBgn0038772, exon 3 of 3) 1402 FBgn0038772 FBgn0038772 FBtr0083835 CG4973 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4659 chr3R 1394598 1394660 + 39 NA promoter-TSS (FBgn0041191) protein_coding-promoter-TSS (FBgn0041191) -52 FBgn0041191 FBgn0041191 FBtr0078694 Rheb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2223 chr2R 5710452 5710521 + 39 NA promoter-TSS (FBgn0050001) protein_coding-promoter-TSS (FBgn0050001) 53 FBgn0050001 FBgn0050001 FBtr0088492 CG30001 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4026 chr3L 13221790 13221997 + 39 NA exon (FBgn0023095, exon 1 of 5) protein_coding-exon (FBgn0023095, exon 1 of 5) 101 FBgn0023095 FBgn0023095 FBtr0305480 caps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_390 chr2L 5771365 5771419 + 39 NA exon (FBgn0051912, exon 2 of 2) ncRNA-exon (FBgn0051912, exon 2 of 2) 1640 FBgn0051912 FBgn0051912 FBtr0332036 CR31912 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1653 chr2L 21757467 21757528 + 39 NA promoter-TSS (FBgn0032961) protein_coding-promoter-TSS (FBgn0032961) -31 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5727 chr3R 16358877 16358948 + 39 NA Intergenic Intergenic 1514 FBgn0262146 FBgn0262146 FBtr0304129 MtnE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1476 chr2L 19792131 19792187 + 39 NA promoter-TSS (FBgn0032822) protein_coding-promoter-TSS (FBgn0032822) -277 FBgn0032821 FBgn0032821 FBtr0300967 CdGAPr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5840 chr3R 18552100 18552161 + 39 NA promoter-TSS (FBgn0039013) protein_coding-promoter-TSS (FBgn0039013) -26 FBgn0039013 FBgn0039013 FBtr0084326 CG4813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6189 chr3R 24165495 24165599 + 39 NA promoter-TSS (FBgn0039581) protein_coding-promoter-TSS (FBgn0039581) -57 FBgn0039580 FBgn0039580 FBtr0085297 Gfat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2834 chr2R 15714092 15714146 + 38 NA promoter-TSS (FBgn0034476) protein_coding-promoter-TSS (FBgn0034476) -291 FBgn0034476 FBgn0034476 FBtr0086336 Toll-7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7034 chrX 3638618 3638691 + 38 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -24989 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4225 chr3L 16581271 16581386 + 38 NA promoter-TSS (FBgn0002283) protein_coding-promoter-TSS (FBgn0002283) -329 FBgn0002283 FBgn0002283 FBtr0307336 l(3)73Ah protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4664 chr3R 1584682 1584736 + 38 NA promoter-TSS (FBgn0262603) protein_coding-promoter-TSS (FBgn0262603) -10 FBgn0262603 FBgn0262603 FBtr0078677 sec8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2980 chr2R 18260820 18260901 + 38 NA promoter-TSS (FBgn0034720) protein_coding-promoter-TSS (FBgn0034720) -250 FBgn0034720 FBgn0034720 FBtr0113107 Liprin-gamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2435 chr2R 9109834 9109917 + 38 NA promoter-TSS (FBgn0011763) protein_coding-promoter-TSS (FBgn0011763) -32 FBgn0043010 FBgn0043010 FBtr0087763 Fsn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2162 chr2R 4828117 4828185 + 38 NA promoter-TSS (FBgn0033354) protein_coding-promoter-TSS (FBgn0033354) 231 FBgn0033355 FBgn0033355 FBtr0088656 CG13748 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2608 chr2R 11904615 11904672 + 38 NA promoter-TSS (FBgn0034067) protein_coding-promoter-TSS (FBgn0034067) 16 FBgn0034066 FBgn0034066 FBtr0087261 CG8397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2549 chr2R 10850748 10850830 + 38 NA promoter-TSS (FBgn0033987) protein_coding-promoter-TSS (FBgn0033987) -2396 FBgn0033987 FBgn0033987 FBtr0087411 ckn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7273 chrX 21216330 21216384 + 38 NA promoter-TSS (FBgn0015379) protein_coding-promoter-TSS (FBgn0015379) -18 FBgn0015379 FBgn0015379 FBtr0077193 dod protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4704 chr3R 2179108 2179162 + 38 NA promoter-TSS (FBgn0014001) protein_coding-promoter-TSS (FBgn0014001) 2507 FBgn0014001 FBgn0014001 FBtr0081716 Pak protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1440 chr2L 19363215 19363293 + 38 NA promoter-TSS (FBgn0024245) protein_coding-promoter-TSS (FBgn0024245) -30 FBgn0024245 FBgn0024245 FBtr0081224 dnt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7240 chrX 18186309 18186363 + 38 NA Intergenic Intergenic 15070 FBgn0053542 FBgn0053542 FBtr0113465 upd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5642 chr3R 15527410 15527464 + 38 NA Intergenic Intergenic 14212 FBgn0085315 FBgn0085315 FBtr0112482 CG34286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3074 chr2R 20075068 20075137 + 38 NA promoter-TSS (FBgn0034987) protein_coding-promoter-TSS (FBgn0034987) 876 FBgn0034987 FBgn0034987 FBtr0072260 CG3363 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4936 chr3R 5636057 5636196 + 38 NA Intergenic Intergenic -1041 FBgn0037760 FBgn0037760 FBtr0082155 FBX011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2135 chr2R 4520081 4520157 + 38 NA promoter-TSS (FBgn0033317) protein_coding-promoter-TSS (FBgn0033317) -652 FBgn0033317 FBgn0033317 FBtr0088727 CG8635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2465 chr2R 9423542 9423651 + 38 NA promoter-TSS (FBgn0011896) tRNA-promoter-TSS (FBgn0011896) 26 FBgn0011896 FBgn0011896 FBtr0087688 tRNA:K2:50C tRNA Nup98-S2-pascual-garcia2017_R1_peak_5923 chr3R 21341375 21341429 + 38 NA promoter-TSS (FBgn0011666) protein_coding-promoter-TSS (FBgn0011666) 9405 FBgn0039343 FBgn0039343 FBtr0084880 CG5111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7159 chrX 12646005 12646068 + 38 NA Intergenic Intergenic 5686 FBgn0030418 FBgn0030418 FBtr0333722 CG4004 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7012 chrX 2190587 2190657 + 38 NA intron (FBgn0003079, intron 2 of 5) protein_coding-intron (FBgn0003079, intron 2 of 5) 705 FBgn0003079 FBgn0003079 FBtr0111025 phl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3411 chr3L 607869 607936 + 37 NA Intergenic Intergenic -1333 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_759 chr2L 11813763 11813817 + 37 NA promoter-TSS (FBgn0032378) protein_coding-promoter-TSS (FBgn0032378) -10 FBgn0032378 FBgn0032378 FBtr0080259 CycY protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2089 chr2R 3888795 3888849 + 37 NA exon (FBgn0033249, exon 2 of 2) protein_coding-exon (FBgn0033249, exon 2 of 2) 803 FBgn0033249 FBgn0033249 FBtr0088868 CG11191 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2269 chr2R 6430933 6431023 + 37 NA promoter-TSS (FBgn0005630) protein_coding-promoter-TSS (FBgn0005630) -6203 FBgn0263483 FBgn0263483 FBtr0309782 snoRNA:lola-d snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2573 chr2R 11268908 11268962 + 37 NA promoter-TSS (FBgn0026370) protein_coding-promoter-TSS (FBgn0026370) -470 FBgn0000996 FBgn0000996 FBtr0087387 dup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5957 chr3R 21858405 21858482 + 37 NA promoter-TSS (FBgn0002632) protein_coding-promoter-TSS (FBgn0002632) -190 FBgn0002632 FBgn0002632 FBtr0084959 m6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2042 chr2R 2899663 2899761 + 37 NA promoter-TSS (FBgn0029506) protein_coding-promoter-TSS (FBgn0029506) -49 FBgn0029506 FBgn0029506 FBtr0086180 Tsp42Ee protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7125 chrX 9578924 9578985 + 37 NA intron (FBgn0261617, intron 1 of 13) protein_coding-intron (FBgn0261617, intron 1 of 13) 1737 FBgn0261617 FBgn0261617 FBtr0302722 nej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_708 chr2L 11045318 11045391 + 37 NA intron (FBgn0032330, intron 2 of 6) protein_coding-intron (FBgn0032330, intron 2 of 6) 10505 FBgn0040967 FBgn0040967 FBtr0080160 CG18666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13 chr2L 305907 305969 + 37 NA promoter-TSS (FBgn0004611) protein_coding-promoter-TSS (FBgn0004611) 3410 FBgn0263872 FBgn0263872 FBtr0329830 CR43719 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3791 chr3L 8666041 8666108 + 37 NA Intergenic Intergenic -2785 FBgn0001168 FBgn0001168 FBtr0076569 h protein_coding Nup98-S2-pascual-garcia2017_R1_peak_409 chr2L 6088585 6088702 + 37 NA intron (FBgn0028420, intron 1 of 3) protein_coding-intron (FBgn0028420, intron 1 of 3) -2926 FBgn0028420 FBgn0028420 FBtr0290297 Kr-h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4795 chr3R 3160389 3160443 + 36 NA Intergenic Intergenic -10375 FBgn0051496 FBgn0051496 FBtr0081582 CG31496 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_273 chr2L 4208746 4208806 + 36 NA exon (FBgn0001075, exon 6 of 9) protein_coding-exon (FBgn0001075, exon 6 of 9) -11399 FBgn0031589 FBgn0031589 FBtr0113020 CG3714 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1719 chr2L 22009020 22009074 + 36 NA Intergenic Intergenic -6184 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1496 chr2L 20033950 20034005 + 36 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 6062 FBgn0032840 FBgn0032840 FBtr0081327 sNPF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5399 chr3R 12577989 12578046 + 36 NA promoter-TSS (FBgn0020556) ncRNA-promoter-TSS (FBgn0020556) -961 FBgn0063261 FBgn0063261 FBtr0083345 CG31275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1981 chr2R 1353804 1353858 + 36 NA Intergenic Intergenic 29510 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4431 chr3L 21226822 21226876 + 36 NA intron (FBgn0004865, intron 4 of 6) protein_coding-intron (FBgn0004865, intron 3 of 5) 7140 FBgn0004865 FBgn0004865 FBtr0078307 Eip78C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7242 chrX 18218180 18218249 + 36 NA TTS (FBgn0030913) protein_coding-TTS (FBgn0030913) -8032 FBgn0030912 FBgn0030912 FBtr0074580 CG6023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4210 chr3L 16333609 16333687 + 36 NA exon (FBgn0036612, exon 2 of 4) protein_coding-exon (FBgn0036612, exon 2 of 4) 1545 FBgn0036612 FBgn0036612 FBtr0110866 CG4998 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2578 chr2R 11371042 11371119 + 36 NA promoter-TSS (FBgn0034021) protein_coding-promoter-TSS (FBgn0034021) -742 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1346 chr2L 18091159 18091240 + 36 NA exon (FBgn0032663, exon 2 of 2) protein_coding-exon (FBgn0032663, exon 2 of 2) 1039 FBgn0032663 FBgn0032663 FBtr0081045 CG15153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3247 chr2RHet 1551720 1551823 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5999 chr3R 22219281 22219344 + 36 NA Intergenic Intergenic 10066 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2810 chr2R 15490793 15490847 + 36 NA intron (FBgn0003435, intron 2 of 10) protein_coding-intron (FBgn0003435, intron 2 of 9) 9525 FBgn0034459 FBgn0034459 FBtr0300829 CG16716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5573 chr3R 14604086 14604140 + 36 NA intron (FBgn0038652, intron 2 of 10) protein_coding-intron (FBgn0038652, intron 2 of 10) 13957 FBgn0038652 FBgn0038652 FBtr0083679 CG7720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_617 chr2L 9019563 9019690 + 36 NA Intergenic Intergenic -5556 FBgn0032089 FBgn0032089 FBtr0079779 Rcd-1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2505 chr2R 10191354 10191418 + 36 NA Intergenic Intergenic -1528 FBgn0033921 FBgn0033921 FBtr0087562 tej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_742 chr2L 11561327 11561435 + 36 NA Intergenic Intergenic 25236 FBgn0263386 FBgn0263386 FBtr0309073 CG43438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2784 chr2R 14924500 14924555 + 36 NA promoter-TSS (FBgn0034413) protein_coding-promoter-TSS (FBgn0034413) -635 FBgn0034413 FBgn0034413 FBtr0086597 CG15115 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6686 chrU 68196 68254 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1500 chr2L 20054199 20054254 + 36 NA intron (FBgn0032840, intron 2 of 4) protein_coding-intron (FBgn0032840, intron 2 of 4) 6749 FBgn0014127 FBgn0014127 FBtr0081349 barr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4110 chr3L 14577082 14577136 + 36 NA exon (FBgn0040318, exon 4 of 4) protein_coding-exon (FBgn0040318, exon 4 of 4) 15531 FBgn0040318 FBgn0040318 FBtr0075720 HGTX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3689 chr3L 6899972 6900026 + 36 NA Intergenic Intergenic 7065 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1202 chr2L 16807727 16807781 + 36 NA exon (FBgn0086673, exon 1 of 3) protein_coding-exon (FBgn0086673, exon 1 of 3) 2870 FBgn0086673 FBgn0086673 FBtr0080914 CG13272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4453 chr3L 22227600 22227683 + 36 NA intron (FBgn0037153, intron 9 of 10) protein_coding-intron (FBgn0037153, intron 9 of 10) 28354 FBgn0028500 FBgn0028500 FBtr0078512 Rich protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4792 chr3R 3146965 3147019 + 36 NA Intergenic Intergenic -4063 FBgn0037498 FBgn0037498 FBtr0081591 CG10029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3150 chr2RHet 122709 122773 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3021 chr2R 18973668 18973751 + 36 NA promoter-TSS (FBgn0034819) protein_coding-promoter-TSS (FBgn0034819) 75 FBgn0034819 FBgn0034819 FBtr0071980 CG9877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3381 chr2RHet 2434631 2434703 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6788 chrU 1968583 1968643 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_294 chr2L 4416460 4416514 + 36 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) 2561 FBgn0051963 FBgn0051963 FBtr0077458 tRNA:CR31963 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1165 chr2L 16239469 16239523 + 36 NA exon (FBgn0261999, exon 10 of 11) protein_coding-exon (FBgn0261999, exon 10 of 11) -2443 FBgn0262000 FBgn0262000 FBtr0303798 CG42818 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2476 chr2R 9585045 9585099 + 36 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) -4198 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4964 chr3R 6064726 6064783 + 36 NA intron (FBgn0261928, intron 1 of 9) protein_coding-intron (FBgn0261928, intron 2 of 9) -12487 FBgn0037801 FBgn0037801 FBtr0082225 CG3999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4576 chr3LHet 1440560 1440638 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3309 chr2RHet 1956482 1956536 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6126 chr3R 23612532 23612631 + 36 NA intron (FBgn0085382, intron 8 of 11) protein_coding-intron (FBgn0085382, intron 8 of 11) 50319 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3387 chr2RHet 2914805 2914872 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1210 chr2L 16919312 16919389 + 36 NA Intergenic Intergenic -9041 FBgn0026150 FBgn0026150 FBtr0304931 ApepP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2229 chr2R 5823947 5824001 + 36 NA intron (FBgn0011656, intron 1 of 9) protein_coding-intron (FBgn0011656, intron 2 of 9) 22376 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7234 chrX 17826035 17826089 + 36 NA intron (FBgn0003380, intron 10 of 12) protein_coding-intron (FBgn0003380, intron 10 of 12) 20566 FBgn0030884 FBgn0030884 FBtr0074505 CG6847 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2054 chr2R 3219473 3219556 + 36 NA exon (FBgn0033159, exon 11 of 24) protein_coding-exon (FBgn0033159, exon 11 of 24) 20601 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_989 chr2L 14630136 14630190 + 36 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 13894 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_585 chr2L 8829014 8829068 + 36 NA exon (FBgn0029123, exon 1 of 1) protein_coding-exon (FBgn0029123, exon 1 of 1) 3416 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1457 chr2L 19637003 19637071 + 36 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 50414 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_275 chr2L 4239526 4239603 + 36 NA Intergenic Intergenic 11922 FBgn0003941 FBgn0003941 FBtr0077470 RpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5355 chr3R 12194870 12194959 + 36 NA promoter-TSS (FBgn0038422) protein_coding-promoter-TSS (FBgn0038422) -888 FBgn0038422 FBgn0038422 FBtr0083321 CG14880 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3334 chr2RHet 2141239 2141320 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4598 chr3R 421639 421693 + 36 NA Intergenic Intergenic -17300 FBgn0052945 FBgn0052945 FBtr0078896 CG32945 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_972 chr2L 14570327 14570384 + 36 NA Intergenic Intergenic -6629 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_40 chr2L 794870 794939 + 36 NA Intergenic Intergenic -4106 FBgn0000442 FBgn0000442 FBtr0078042 Pkg21D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3886 chr3L 10711288 10711432 + 36 NA Intergenic Intergenic -21383 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7198 chrX 14560020 14560112 + 36 NA Intergenic Intergenic -12202 FBgn0015773 FBgn0015773 FBtr0308337 NetA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3186 chr2RHet 558697 558798 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1401 chr2L 18917359 18917417 + 36 NA exon (FBgn0032723, exon 10 of 11) protein_coding-exon (FBgn0032723, exon 10 of 11) 26560 FBgn0032723 FBgn0032723 FBtr0081193 ssp3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1421 chr2L 19207875 19207936 + 36 NA exon (FBgn0015380, exon 4 of 4) protein_coding-exon (FBgn0015380, exon 4 of 4) 17559 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2440 chr2R 9178341 9178398 + 36 NA intron (FBgn0052843, intron 1 of 10) protein_coding-intron (FBgn0052843, intron 1 of 10) 5060 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4145 chr3L 15333726 15333780 + 36 NA exon (FBgn0036494, exon 1 of 1) protein_coding-exon (FBgn0036494, exon 1 of 1) 3961 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5274 chr3R 11260396 11260450 + 36 NA promoter-TSS (FBgn0038339) protein_coding-promoter-TSS (FBgn0038339) -517 FBgn0038339 FBgn0038339 FBtr0113239 CG6118 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5189 chr3R 9447093 9447159 + 36 NA Intergenic Intergenic 5400 FBgn0038161 FBgn0038161 FBtr0082794 CG9269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6492 chr3R 27293730 27293787 + 36 NA Intergenic Intergenic 4691 FBgn0039850 FBgn0039850 FBtr0085789 CG11333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3875 chr3L 10614253 10614323 + 36 NA Intergenic Intergenic 2388 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5513 chr3R 13892929 13893019 + 36 NA Intergenic Intergenic -13869 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6853 chrU 7026683 7026738 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6809 chrU 2434429 2434524 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2771 chr2R 14653668 14653740 + 36 NA promoter-TSS (FBgn0034389) protein_coding-promoter-TSS (FBgn0034389) -877 FBgn0034389 FBgn0034389 FBtr0110971 Mctp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4079 chr3L 14124355 14124567 + 36 NA promoter-TSS (FBgn0042630) protein_coding-promoter-TSS (FBgn0042630) -64 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6096 chr3R 23313325 23313407 + 36 NA promoter-TSS (FBgn0039520) protein_coding-promoter-TSS (FBgn0039520) -283 FBgn0039520 FBgn0039520 FBtr0085184 Gr98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1652 chr2L 21741677 21741731 + 36 NA exon (FBgn0086779, exon 9 of 9) protein_coding-exon (FBgn0086779, exon 9 of 9) 15762 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3707 chr3L 6990353 6990514 + 36 NA Intergenic Intergenic -1510 FBgn0260660 FBgn0260660 FBtr0308094 mp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3558 chr3L 3506354 3506444 + 36 NA exon (FBgn0259224, exon 5 of 6) protein_coding-exon (FBgn0259224, exon 5 of 6) 6282 FBgn0001254 FBgn0001254 FBtr0073141 ImpE2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7084 chrX 7088837 7088944 + 36 NA intron (FBgn0029939, intron 2 of 5) protein_coding-intron (FBgn0029939, intron 2 of 5) -1172 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6170 chr3R 23978974 23979028 + 36 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 6399 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7137 chrX 10562202 10562276 + 36 NA intron (FBgn0052677, intron 2 of 12) protein_coding-intron (FBgn0052677, intron 2 of 14) 5260 FBgn0030224 FBgn0030224 FBtr0071504 CG12637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2215 chr2R 5651918 5651978 + 36 NA exon (FBgn0005614, exon 13 of 14) protein_coding-exon (FBgn0005614, exon 13 of 14) -6375 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6215 chr3R 24389667 24389721 + 36 NA Intergenic Intergenic -19170 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3725 chr3L 7305592 7305651 + 36 NA intron (FBgn0035756, intron 1 of 12) protein_coding-intron (FBgn0035756, intron 1 of 12) 375 FBgn0035756 FBgn0035756 FBtr0290001 unc-13-4A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7177 chrX 12969761 12969815 + 36 NA exon (FBgn0261388, exon 15 of 15) protein_coding-exon (FBgn0261388, exon 15 of 15) 13624 FBgn0262222 FBgn0262222 FBtr0304282 mir-971 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_439 chr2L 6775285 6775339 + 36 NA promoter-TSS (FBgn0031858) protein_coding-promoter-TSS (FBgn0031858) -400 FBgn0031858 FBgn0031858 FBtr0332335 CG17378 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3148 chr2RHet 108904 108969 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5915 chr3R 20966725 20966779 + 36 NA Intergenic Intergenic 2953 FBgn0039283 FBgn0039283 FBtr0084780 danr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2839 chr2R 15851043 15851114 + 36 NA Intergenic Intergenic 12140 FBgn0034478 FBgn0034478 FBtr0086339 CG10822 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2539 chr2R 10678185 10678272 + 36 NA intron (FBgn0001319, intron 3 of 10) protein_coding-intron (FBgn0001319, intron 3 of 10) 6304 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3715 chr3L 7054047 7054101 + 36 NA exon (FBgn0035733, exon 4 of 5) protein_coding-exon (FBgn0035733, exon 4 of 5) -5340 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2193 chr2R 5233075 5233129 + 36 NA exon (FBgn0033404, exon 1 of 2) protein_coding-exon (FBgn0033404, exon 1 of 2) 248 FBgn0033404 FBgn0033404 FBtr0088503 Or45a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3658 chr3L 6305923 6305988 + 36 NA Intergenic Intergenic -7756 FBgn0041625 FBgn0041625 FBtr0077004 Or65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6390 chr3R 25979037 25979187 + 36 NA TTS (FBgn0039748) protein_coding-TTS (FBgn0039748) 1331 FBgn0039748 FBgn0039748 FBtr0085567 CG15529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6198 chr3R 24226061 24226115 + 36 NA Intergenic Intergenic -17842 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_361 chr2L 5407185 5407254 + 36 NA exon (FBgn0016660, exon 2 of 6) protein_coding-exon (FBgn0016660, exon 2 of 6) 2877 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3905 chr3L 11002316 11002395 + 36 NA promoter-TSS (FBgn0013469) protein_coding-promoter-TSS (FBgn0013469) -422 FBgn0013469 FBgn0013469 FBtr0330080 klu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5811 chr3R 17787567 17787630 + 36 NA intron (FBgn0264490, intron 3 of 6) protein_coding-intron (FBgn0264490, intron 3 of 6) -13750 FBgn0264490 FBgn0264490 FBtr0330384 Eip93F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6804 chrU 2420163 2420258 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4710 chr3R 2305119 2305216 + 36 NA intron (FBgn0037448, intron 2 of 8) protein_coding-intron (FBgn0037448, intron 2 of 8) -7544 FBgn0037448 FBgn0037448 FBtr0308036 CG15186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6042 chr3R 22595096 22595150 + 36 NA Intergenic Intergenic 14807 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_120 chr2L 1477302 1477360 + 36 NA Intergenic Intergenic -14964 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5433 chr3R 12795789 12795878 + 36 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -5093 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1422 chr2L 19209163 19209225 + 36 NA TTS (FBgn0015380) protein_coding-TTS (FBgn0015380) 18848 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6147 chr3R 23826367 23826430 + 36 NA Intergenic Intergenic -9925 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3113 chr2R 20737435 20737502 + 36 NA TTS (FBgn0035070) protein_coding-TTS (FBgn0035070) 969 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2821 chr2R 15613393 15613484 + 36 NA promoter-TSS (FBgn0050218) tRNA-promoter-TSS (FBgn0050218) 28 FBgn0050218 FBgn0050218 FBtr0086331 tRNA:CR30218 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4831 chr3R 3891100 3891182 + 36 NA intron (FBgn0037546, intron 1 of 3) protein_coding-intron (FBgn0037546, intron 1 of 3) 6135 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5103 chr3R 8155378 8155519 + 36 NA Intergenic Intergenic 6203 FBgn0038012 FBgn0038012 FBtr0082567 CG10013 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2167 chr2R 4883037 4883117 + 36 NA exon (FBgn0085379, exon 5 of 9) protein_coding-exon (FBgn0085379, exon 5 of 9) -10014 FBgn0033359 FBgn0033359 FBtr0273385 CG8213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5401 chr3R 12596400 12596463 + 36 NA intron (FBgn0020556, intron 1 of 2) ncRNA-intron (FBgn0020556, intron 1 of 2) -4353 FBgn0085056 FBgn0085056 FBtr0113492 tre-1 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5694 chr3R 16016127 16016181 + 36 NA Intergenic Intergenic -14377 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3679 chr3L 6767457 6767516 + 36 NA Intergenic Intergenic -13272 FBgn0052392 FBgn0052392 FBtr0076948 CG32392 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6698 chrU 123978 124032 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3229 chr2RHet 1303776 1303879 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4746 chr3R 2677136 2677211 + 36 NA Intergenic Intergenic -1470 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_216 chr2L 3259816 3259872 + 36 NA Intergenic Intergenic -9593 FBgn0031513 FBgn0031513 FBtr0301033 CG3347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4951 chr3R 5886041 5886100 + 36 NA promoter-TSS (FBgn0037783) protein_coding-promoter-TSS (FBgn0037783) 51 FBgn0037783 FBgn0037783 FBtr0082176 Npc2c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_23 chr2L 671283 671337 + 36 NA intron (FBgn0000497, intron 2 of 11) protein_coding-intron (FBgn0000497, intron 2 of 11) 43658 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4209 chr3L 16325519 16325573 + 36 NA promoter-TSS (FBgn0040794) protein_coding-promoter-TSS (FBgn0040794) 513 FBgn0040074 FBgn0040074 FBtr0075375 retinin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1356 chr2L 18195658 18195712 + 36 NA intron (FBgn0261804, intron 10 of 14) protein_coding-intron (FBgn0261804, intron 10 of 14) -4651 FBgn0263332 FBgn0263332 FBtr0308755 CR43413 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3954 chr3L 12152535 12152608 + 36 NA exon (FBgn0036259, exon 2 of 3) protein_coding-exon (FBgn0036259, exon 2 of 3) 4264 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5123 chr3R 8582943 8582997 + 36 NA intron (FBgn0038084, intron 1 of 5) protein_coding-intron (FBgn0038084, intron 1 of 5) -13568 FBgn0038083 FBgn0038083 FBtr0302379 CG5999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1695 chr2L 21945023 21945092 + 36 NA Intergenic Intergenic 28696 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2891 chr2R 16745460 16745536 + 36 NA Intergenic Intergenic -5872 FBgn0034553 FBgn0034553 FBtr0071560 CG9993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1914 chr2LHet 285557 285620 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6130 chr3R 23634621 23634697 + 36 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -36152 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_765 chr2L 11896357 11896454 + 36 NA exon (FBgn0259225, exon 1 of 8) protein_coding-exon (FBgn0259225, exon 1 of 8) -38100 FBgn0026392 FBgn0026392 FBtr0080278 Or33a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1221 chr2L 16992888 16992958 + 36 NA exon (FBgn0053179, exon 7 of 7) protein_coding-exon (FBgn0053179, exon 7 of 7) 7945 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4564 chr3LHet 1146368 1146422 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_626 chr2L 9284230 9284300 + 36 NA intron (FBgn0263984, intron 2 of 2) protein_coding-intron (FBgn0028433, intron 3 of 3) 20742 FBgn0262033 FBgn0262033 FBtr0303929 CG42844 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_960 chr2L 14512742 14512838 + 36 NA Intergenic Intergenic -5301 FBgn0011862 FBgn0011862 FBtr0089613 tRNA:G3:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_1811 chr2L 22527728 22527800 + 36 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 55282 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3722 chr3L 7254442 7254501 + 36 NA intron (FBgn0035755, intron 2 of 5) protein_coding-intron (FBgn0035755, intron 2 of 4) 2549 FBgn0035755 FBgn0035755 FBtr0309299 CG14830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5393 chr3R 12551632 12551704 + 36 NA intron (FBgn0003944, intron 1 of 3) protein_coding-intron (FBgn0003944, intron 1 of 3) 8680 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3741 chr3L 7612272 7612326 + 36 NA intron (FBgn0035802, intron 5 of 16) protein_coding-intron (FBgn0035802, intron 3 of 14) -20518 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3654 chr3L 6255784 6255844 + 36 NA promoter-TSS (FBgn0001258) protein_coding-promoter-TSS (FBgn0001258) -1554 FBgn0001258 FBgn0001258 FBtr0332066 ImpL3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2649 chr2R 12437055 12437112 + 36 NA Intergenic Intergenic -2682 FBgn0034135 FBgn0034135 FBtr0087097 Syn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2177 chr2R 4951755 4951832 + 36 NA Intergenic Intergenic -2364 FBgn0033369 FBgn0033369 FBtr0088661 CG8197 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1245 chr2L 17162147 17162254 + 36 NA intron (FBgn0032627, intron 3 of 5) protein_coding-intron (FBgn0032627, intron 3 of 5) -9212 FBgn0083942 FBgn0083942 FBtr0110785 CG34106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1132 chr2L 15986610 15986732 + 36 NA Intergenic Intergenic -3085 FBgn0263331 FBgn0263331 FBtr0308754 CR43412 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3761 chr3L 8064964 8065029 + 36 NA exon (FBgn0262579, exon 2 of 12) protein_coding-exon (FBgn0262579, exon 2 of 12) 944 FBgn0262579 FBgn0262579 FBtr0304994 Ect4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6084 chr3R 23193840 23193894 + 36 NA TTS (FBgn0263453) ncRNA-TTS (FBgn0263453) 1720 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3630 chr3L 5958080 5958159 + 36 NA Intergenic Intergenic 10988 FBgn0035656 FBgn0035656 FBtr0332041 CG10479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1845 chr2L 22656577 22656693 + 36 NA Intergenic Intergenic -7554 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1172 chr2L 16386599 16386655 + 36 NA Intergenic Intergenic 20708 FBgn0028841 FBgn0028841 FBtr0080859 jhamt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4495 chr3L 23717675 23717810 + 36 NA Intergenic Intergenic -2187 FBgn0058298 FBgn0058298 FBtr0111169 CG40298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6444 chr3R 26817853 26818006 + 36 NA exon (FBgn0051007, exon 1 of 1) protein_coding-exon (FBgn0051007, exon 1 of 1) 250 FBgn0051007 FBgn0051007 FBtr0085747 CG31007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3297 chr2RHet 1928849 1928935 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6182 chr3R 24058579 24058640 + 36 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 30735 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_756 chr2L 11790666 11790720 + 36 NA TTS (FBgn0032376) protein_coding-TTS (FBgn0032376) 1089 FBgn0032375 FBgn0032375 FBtr0300384 CG14932 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3650 chr3L 6149880 6149955 + 36 NA exon (FBgn0035685, exon 2 of 2) protein_coding-exon (FBgn0035685, exon 2 of 2) 560 FBgn0035685 FBgn0035685 FBtr0077020 CG13297 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1357 chr2L 18203670 18203748 + 36 NA exon (FBgn0261804, exon 7 of 15) protein_coding-exon (FBgn0261804, exon 7 of 15) 3373 FBgn0263332 FBgn0263332 FBtr0308755 CR43413 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2528 chr2R 10560433 10560493 + 36 NA exon (FBgn0020269, exon 5 of 6) protein_coding-exon (FBgn0020269, exon 5 of 6) 4510 FBgn0033955 FBgn0033955 FBtr0300765 CG12866 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4242 chr3L 16835557 16835614 + 36 NA exon (FBgn0036666, exon 1 of 7) protein_coding-exon (FBgn0036666, exon 1 of 7) 191 FBgn0036666 FBgn0036666 FBtr0075329 TSG101 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1056 chr2L 15208417 15208506 + 36 NA Intergenic Intergenic 6202 FBgn0263089 FBgn0263089 FBtr0307107 CR43357 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_763 chr2L 11856614 11856668 + 36 NA intron (FBgn0259225, intron 3 of 9) protein_coding-intron (FBgn0259225, intron 3 of 9) 3211 FBgn0261805 FBgn0261805 FBtr0303281 CG42751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1121 chr2L 15856174 15856262 + 36 NA exon (FBgn0028902, exon 3 of 3) protein_coding-exon (FBgn0028902, exon 3 of 3) 2092 FBgn0028902 FBgn0028902 FBtr0080788 Tektin-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1292 chr2L 17616939 17617001 + 36 NA Intergenic Intergenic 9376 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3595 chr3L 4741212 4741267 + 36 NA intron (FBgn0035574, intron 3 of 9) protein_coding-intron (FBgn0035574, intron 3 of 10) 5393 FBgn0264474 FBgn0264474 FBtr0332743 CR43882 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2142 chr2R 4631700 4631776 + 36 NA intron (FBgn0027585, intron 1 of 7) protein_coding-intron (FBgn0027585, intron 1 of 7) 6863 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5791 chr3R 17328009 17328122 + 36 NA exon (FBgn0004863, exon 2 of 4) protein_coding-exon (FBgn0004863, exon 2 of 4) 2088 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5627 chr3R 15367371 15367425 + 36 NA intron (FBgn0260003, intron 2 of 14) protein_coding-intron (FBgn0260003, intron 22 of 34) -44520 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5037 chr3R 7092545 7092620 + 36 NA Intergenic Intergenic -10737 FBgn0262972 FBgn0262972 FBtr0306728 CR43283 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_841 chr2L 12931723 12931782 + 36 NA Intergenic Intergenic 6141 FBgn0040506 FBgn0040506 FBtr0310556 ACXE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2226 chr2R 5791578 5791653 + 36 NA promoter-TSS (FBgn0033464) protein_coding-promoter-TSS (FBgn0033464) -827 FBgn0033464 FBgn0033464 FBtr0088449 CG1441 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2264 chr2R 6273930 6274012 + 36 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) -6357 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6711 chrU 174327 174381 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6877 chrUextra 272245 272318 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5492 chr3R 13684995 13685049 + 36 NA intron (FBgn0261649, intron 6 of 9) protein_coding-intron (FBgn0261649, intron 6 of 9) -47164 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_392 chr2L 5799643 5799705 + 36 NA TTS (FBgn0031739) protein_coding-TTS (FBgn0031739) 2301 FBgn0031739 FBgn0031739 FBtr0332037 CG14005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3269 chr2RHet 1884872 1884927 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5183 chr3R 9418136 9418260 + 36 NA exon (FBgn0038159, exon 1 of 1) protein_coding-exon (FBgn0038159, exon 1 of 1) 138 FBgn0038159 FBgn0038159 FBtr0082789 CG14369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5757 chr3R 16803583 16803696 + 36 NA promoter-TSS (FBgn0013995) protein_coding-promoter-TSS (FBgn0013995) -366 FBgn0013995 FBgn0013995 FBtr0309202 Calx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4340 chr3L 18059672 18059726 + 36 NA Intergenic Intergenic -1903 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1315 chr2L 17818719 17818798 + 36 NA intron (FBgn0262018, intron 3 of 14) protein_coding-intron (FBgn0262018, intron 2 of 13) -6086 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3160 chr2RHet 311670 311724 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4386 chr3L 19163762 19163845 + 36 NA promoter-TSS (FBgn0016797) protein_coding-promoter-TSS (FBgn0016797) -55 FBgn0016797 FBgn0016797 FBtr0075029 fz2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_870 chr2L 13471377 13471431 + 36 NA intron (FBgn0263354, intron 1 of 6) protein_coding-intron (FBgn0263354, intron 3 of 8) 9630 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_382 chr2L 5656805 5656875 + 36 NA intron (FBgn0051646, intron 1 of 12) protein_coding-intron (FBgn0051646, intron 1 of 12) 1713 FBgn0051646 FBgn0051646 FBtr0079114 CG31646 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_277 chr2L 4245573 4245649 + 36 NA Intergenic Intergenic -11961 FBgn0031591 FBgn0031591 FBtr0077471 CG15425 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5092 chr3R 8088033 8088087 + 36 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) 8151 FBgn0038008 FBgn0038008 FBtr0082561 CG3942 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2536 chr2R 10629962 10630070 + 36 NA exon (FBgn0033958, exon 4 of 5) protein_coding-exon (FBgn0033958, exon 4 of 5) 2818 FBgn0033958 FBgn0033958 FBtr0087476 CG12858 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6978 chrX 426604 426665 + 36 NA intron (FBgn0000108, intron 2 of 10) protein_coding-intron (FBgn0000108, intron 2 of 11) 2131 FBgn0000108 FBgn0000108 FBtr0307291 Appl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5145 chr3R 8772041 8772104 + 36 NA Intergenic Intergenic -15402 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4940 chr3R 5688668 5688742 + 36 NA intron (FBgn0037766, intron 2 of 2) protein_coding-intron (FBgn0037766, intron 2 of 2) 5137 FBgn0037766 FBgn0037766 FBtr0330082 Teh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2782 chr2R 14900094 14900148 + 36 NA Intergenic Intergenic -17393 FBgn0263083 FBgn0263083 FBtr0307099 CG43351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4901 chr3R 4799761 4799870 + 36 NA Intergenic Intergenic -6769 FBgn0037646 FBgn0037646 FBtr0081958 CAHbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3610 chr3L 5379927 5379981 + 36 NA Intergenic Intergenic -4033 FBgn0035604 FBgn0035604 FBtr0077153 Ir64a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4694 chr3R 2049048 2049102 + 36 NA Intergenic Intergenic -1572 FBgn0037412 FBgn0037412 FBtr0078615 Osi4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3972 chr3L 12436750 12436804 + 36 NA Intergenic Intergenic -11009 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3397 chr2RHet 3238932 3239023 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3975 chr3L 12460586 12460670 + 36 NA exon (FBgn0000625, exon 1 of 5) protein_coding-exon (FBgn0000625, exon 1 of 5) 493 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4055 chr3L 13743209 13743263 + 36 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 53264 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2251 chr2R 6229249 6229324 + 36 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 10380 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2975 chr2R 18223197 18223251 + 36 NA exon (FBgn0034720, exon 12 of 14) protein_coding-exon (FBgn0034720, exon 12 of 14) 2593 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_100 chr2L 1358330 1358436 + 36 NA TTS (FBgn0051659) protein_coding-TTS (FBgn0051659) 1407 FBgn0051659 FBgn0051659 FBtr0301010 CG31659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2334 chr2R 7506546 7506607 + 36 NA promoter-TSS (FBgn0086712) protein_coding-promoter-TSS (FBgn0086712) -48 FBgn0086712 FBgn0086712 FBtr0088090 Egm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_863 chr2L 13358956 13359036 + 36 NA TTS (FBgn0032507) protein_coding-TTS (FBgn0032507) 2531 FBgn0032507 FBgn0032507 FBtr0080474 CG9377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4601 chr3R 546041 546114 + 36 NA exon (FBgn0027570, exon 8 of 9) protein_coding-exon (FBgn0027570, exon 8 of 9) -6159 FBgn0037270 FBgn0037270 FBtr0078892 CG9769 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1255 chr2L 17214395 17214460 + 36 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -24932 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1548 chr2L 20537499 20537553 + 36 NA Intergenic Intergenic -24898 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4299 chr3L 17581855 17581909 + 36 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -22620 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5917 chr3R 21007724 21007794 + 36 NA intron (FBgn0083946, intron 2 of 8) protein_coding-intron (FBgn0083946, intron 2 of 8) -2346 FBgn0039286 FBgn0039286 FBtr0330288 dan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4753 chr3R 2738534 2738664 + 36 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) -8195 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3573 chr3L 4050146 4050200 + 36 NA intron (FBgn0035490, intron 1 of 3) protein_coding-intron (FBgn0035490, intron 1 of 3) -2438 FBgn0035491 FBgn0035491 FBtr0073281 Dpy-30L2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4807 chr3R 3422816 3422870 + 36 NA exon (FBgn0083963, exon 4 of 13) protein_coding-exon (FBgn0083963, exon 4 of 13) 42313 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5731 chr3R 16477106 16477161 + 36 NA exon (FBgn0028422, exon 4 of 14) protein_coding-exon (FBgn0028422, exon 4 of 14) 1039 FBgn0028422 FBgn0028422 FBtr0083938 KaiRIA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5833 chr3R 18302111 18302165 + 36 NA intron (FBgn0038975, intron 8 of 13) protein_coding-intron (FBgn0038975, intron 8 of 13) -4472 FBgn0263554 FBgn0263554 FBtr0309683 mir-4952 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2875 chr2R 16409496 16409550 + 36 NA Intergenic Intergenic -4309 FBgn0034511 FBgn0034511 FBtr0086214 CG13422 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1337 chr2L 18014673 18014727 + 36 NA intron (FBgn0243486, intron 1 of 14) protein_coding-intron (FBgn0243486, intron 1 of 14) 2293 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2819 chr2R 15600021 15600075 + 36 NA promoter-TSS (FBgn0043533) protein_coding-promoter-TSS (FBgn0043533) 198 FBgn0034471 FBgn0034471 FBtr0086327 Obp56e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4341 chr3L 18061447 18061518 + 36 NA Intergenic Intergenic -3686 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_482 chr2L 7767315 7767369 + 36 NA promoter-TSS (FBgn0031945) protein_coding-promoter-TSS (FBgn0031945) -307 FBgn0031945 FBgn0031945 FBtr0079485 CG7191 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3221 chr2RHet 1286137 1286191 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6806 chrU 2427850 2427905 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1160 chr2L 16211876 16211930 + 36 NA exon (FBgn0028893, exon 1 of 3) protein_coding-exon (FBgn0028893, exon 1 of 3) 444 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6319 chr3R 25393126 25393210 + 36 NA Intergenic Intergenic 11059 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1248 chr2L 17196879 17196960 + 36 NA exon (FBgn0032629, exon 3 of 6) protein_coding-exon (FBgn0032629, exon 3 of 6) 14981 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5838 chr3R 18395775 18395830 + 36 NA promoter-TSS (FBgn0053110) protein_coding-promoter-TSS (FBgn0053110) -109 FBgn0053110 FBgn0053110 FBtr0084264 CG33110 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_163 chr2L 2024802 2024860 + 36 NA intron (FBgn0031384, intron 1 of 8) protein_coding-intron (FBgn0031384, intron 1 of 8) -6861 FBgn0011860 FBgn0011860 FBtr0077821 tRNA:G3:22BCb tRNA Nup98-S2-pascual-garcia2017_R1_peak_6083 chr3R 23189267 23189321 + 36 NA exon (FBgn0260487, exon 4 of 7) protein_coding-exon (FBgn0260487, exon 4 of 7) 4182 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3275 chr2RHet 1900026 1900140 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2841 chr2R 15885104 15885162 + 36 NA Intergenic Intergenic 2740 FBgn0050212 FBgn0050212 FBtr0086326 tRNA:CR30212 tRNA Nup98-S2-pascual-garcia2017_R1_peak_14 chr2L 359189 359286 + 36 NA Intergenic Intergenic -1363 FBgn0031250 FBgn0031250 FBtr0330651 Ent1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1341 chr2L 18070369 18070423 + 36 NA TTS (FBgn0243486) protein_coding-TTS (FBgn0243486) -7873 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_166 chr2L 2090789 2090854 + 36 NA intron (FBgn0053516, intron 2 of 7) protein_coding-intron (FBgn0053516, intron 2 of 7) 10844 FBgn0031388 FBgn0031388 FBtr0077827 CG12674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4857 chr3R 4195575 4195629 + 36 NA intron (FBgn0263416, intron 15 of 15) protein_coding-intron (FBgn0263416, intron 15 of 15) 7054 FBgn0037584 FBgn0037584 FBtr0301759 CG7963 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_299 chr2L 4429204 4429314 + 36 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -4649 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6782 chrU 1912472 1912527 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_604 chr2L 8897167 8897221 + 36 NA Intergenic Intergenic -1610 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_780 chr2L 12271600 12271674 + 36 NA exon (FBgn0000114, exon 3 of 12) protein_coding-exon (FBgn0000114, exon 3 of 12) 63928 FBgn0051759 FBgn0051759 FBtr0290239 CG31759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3492 chr3L 1847571 1847648 + 36 NA Intergenic Intergenic -5525 FBgn0035281 FBgn0035281 FBtr0332673 Cpr62Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1499 chr2L 20052725 20052853 + 36 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 8186 FBgn0014127 FBgn0014127 FBtr0081349 barr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5835 chr3R 18331126 18331180 + 36 NA intron (FBgn0038980, intron 1 of 7) protein_coding-intron (FBgn0038980, intron 1 of 7) 8216 FBgn0038980 FBgn0038980 FBtr0301484 oa2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4099 chr3L 14394458 14394531 + 36 NA exon (FBgn0036422, exon 2 of 3) protein_coding-exon (FBgn0036422, exon 2 of 3) 1331 FBgn0036422 FBgn0036422 FBtr0075729 CG3868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3680 chr3L 6783100 6783194 + 36 NA promoter-TSS (FBgn0086680) protein_coding-promoter-TSS (FBgn0086680) -111 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3546 chr3L 3107369 3107423 + 36 NA promoter-TSS (FBgn0035398) protein_coding-promoter-TSS (FBgn0035398) -438 FBgn0035398 FBgn0035398 FBtr0073124 Cht7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5797 chr3R 17512219 17512298 + 36 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) -14786 FBgn0259113 FBgn0259113 FBtr0084115 DNApol-alpha180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5692 chr3R 16012137 16012288 + 36 NA Intergenic Intergenic 17054 FBgn0038774 FBgn0038774 FBtr0083866 CG5023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1163 chr2L 16229634 16229688 + 36 NA Intergenic Intergenic -1814 FBgn0261999 FBgn0261999 FBtr0303797 CG42817 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1344 chr2L 18075460 18075514 + 36 NA Intergenic Intergenic -2782 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5552 chr3R 14341621 14341675 + 36 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 29660 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_303 chr2L 4435494 4435570 + 36 NA TTS (FBgn0085206) protein_coding-TTS (FBgn0085206) 1624 FBgn0085207 FBgn0085207 FBtr0112370 CG34178 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7117 chrX 8819002 8819056 + 36 NA promoter-TSS (FBgn0261549) protein_coding-promoter-TSS (FBgn0261549) -188 FBgn0261549 FBgn0261549 FBtr0302662 rdgA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6060 chr3R 22912463 22912532 + 36 NA promoter-TSS (FBgn0039480) protein_coding-promoter-TSS (FBgn0039480) 1003 FBgn0039480 FBgn0039480 FBtr0085136 Cpr97Ea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4475 chr3L 23420418 23420575 + 36 NA Intergenic Intergenic 88070 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_959 chr2L 14506812 14506885 + 36 NA Intergenic Intergenic 10970 FBgn0028882 FBgn0028882 FBtr0080644 tRNA:P:35Bd tRNA Nup98-S2-pascual-garcia2017_R1_peak_6082 chr3R 23183396 23183450 + 36 NA intron (FBgn0260487, intron 1 of 6) protein_coding-intron (FBgn0260487, intron 1 of 6) -1689 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4269 chr3L 17222433 17222493 + 36 NA intron (FBgn0260943, intron 2 of 14) protein_coding-intron (FBgn0260943, intron 2 of 14) 8849 FBgn0260943 FBgn0260943 FBtr0113427 Rbp6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3103 chr2R 20509804 20509858 + 36 NA intron (FBgn0035041, intron 5 of 7) protein_coding-intron (FBgn0035041, intron 5 of 7) 6436 FBgn0086030 FBgn0086030 FBtr0114306 snoRNA:Me18S-G393 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1794 chr2L 22357313 22357483 + 36 NA intron (FBgn0039972, intron 3 of 8) protein_coding-intron (FBgn0039972, intron 1 of 6) 3043 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1934 chr2R 542903 542979 + 36 NA Intergenic Intergenic -16421 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_823 chr2L 12763691 12763745 + 36 NA Intergenic Intergenic -1878 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1169 chr2L 16380238 16380292 + 36 NA Intergenic Intergenic 14346 FBgn0028841 FBgn0028841 FBtr0080859 jhamt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6628 chr4 732196 732305 + 36 NA intron (FBgn0005558, intron 3 of 8) protein_coding-intron (FBgn0005558, intron 2 of 7) 6547 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1957 chr2R 835869 835961 + 36 NA Intergenic Intergenic -1257 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3710 chr3L 7007966 7008020 + 36 NA exon (FBgn0260660, exon 1 of 17) protein_coding-exon (FBgn0260660, exon 1 of 17) 11901 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4735 chr3R 2588340 2588411 + 36 NA promoter-TSS (FBgn0000071) protein_coding-promoter-TSS (FBgn0000071) -753 FBgn0000071 FBgn0000071 FBtr0081620 Ama protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2788 chr2R 14977797 14977851 + 36 NA exon (FBgn0004168, exon 2 of 11) protein_coding-exon (FBgn0004168, exon 2 of 11) 5855 FBgn0050125 FBgn0050125 FBtr0086595 Ir56a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1675 chr2L 21839586 21839716 + 36 NA Intergenic Intergenic 11058 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_412 chr2L 6148267 6148321 + 36 NA Intergenic Intergenic -3677 FBgn0040950 FBgn0040950 FBtr0079203 Muc26B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5310 chr3R 11635209 11635268 + 36 NA intron (FBgn0026616, intron 1 of 4) protein_coding-intron (FBgn0026616, intron 1 of 4) 5264 FBgn0026616 FBgn0026616 FBtr0083179 alpha-Man-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_94 chr2L 1323990 1324055 + 36 NA Intergenic Intergenic -5139 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6324 chr3R 25436268 25436322 + 36 NA intron (FBgn0086361, intron 6 of 6) protein_coding-intron (FBgn0086361, intron 6 of 6) 2096 FBgn0262873 FBgn0262873 FBtr0306279 Diedel2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6181 chr3R 24057985 24058044 + 36 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 31330 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2214 chr2R 5640884 5640938 + 36 NA promoter-TSS (FBgn0005614) protein_coding-promoter-TSS (FBgn0005614) -291 FBgn0005614 FBgn0005614 FBtr0088473 trpl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4016 chr3L 13075451 13075540 + 36 NA exon (FBgn0263661, exon 1 of 1) ncRNA-exon (FBgn0263661, exon 1 of 1) 257 FBgn0263661 FBgn0263661 FBtr0310106 CR43652 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6195 chr3R 24206604 24206664 + 36 NA Intergenic Intergenic 28670 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4481 chr3L 23549813 23549897 + 36 NA intron (FBgn0250816, intron 1 of 6) protein_coding-intron (FBgn0250816, intron 1 of 7) 830 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1824 chr2L 22591864 22591977 + 36 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 52607 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3167 chr2RHet 401340 401394 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_810 chr2L 12657506 12657625 + 36 NA promoter-TSS (FBgn0004394) protein_coding-promoter-TSS (FBgn0004394) -11209 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4428 chr3L 21048413 21048493 + 36 NA intron (FBgn0026179, intron 1 of 5) protein_coding-intron (FBgn0026179, intron 1 of 5) 7127 FBgn0026179 FBgn0026179 FBtr0111038 siz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1959 chr2R 836509 836582 + 36 NA promoter-TSS (FBgn0040849) protein_coding-promoter-TSS (FBgn0040849) -627 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2498 chr2R 10000764 10000828 + 36 NA intron (FBgn0040752, intron 2 of 11) protein_coding-intron (FBgn0040752, intron 2 of 11) 22260 FBgn0259184 FBgn0259184 FBtr0307217 CG42288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2217 chr2R 5671178 5671232 + 36 NA intron (FBgn0027589, intron 2 of 8) protein_coding-intron (FBgn0027589, intron 2 of 8) -9643 FBgn0033443 FBgn0033443 FBtr0088474 CG1698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1350 chr2L 18124704 18124761 + 36 NA exon (FBgn0051785, exon 2 of 3) protein_coding-exon (FBgn0051785, exon 2 of 3) 703 FBgn0051785 FBgn0051785 FBtr0300025 CG31785 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6781 chrU 1880176 1880230 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6791 chrU 1973442 1973520 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4643 chr3R 1213810 1213864 + 36 NA promoter-TSS (FBgn0011965) tRNA-promoter-TSS (FBgn0011965) -113 FBgn0011965 FBgn0011965 FBtr0078790 tRNA:R:83AB tRNA Nup98-S2-pascual-garcia2017_R1_peak_838 chr2L 12915978 12916050 + 36 NA promoter-TSS (FBgn0040509) protein_coding-promoter-TSS (FBgn0040509) -800 FBgn0040509 FBgn0040509 FBtr0080414 ACXB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5868 chr3R 19339615 19339669 + 36 NA TTS (FBgn0039081) protein_coding-TTS (FBgn0039081) 4393 FBgn0039081 FBgn0039081 FBtr0301859 Irk2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5425 chr3R 12770431 12770487 + 36 NA promoter-TSS (FBgn0000015) protein_coding-promoter-TSS (FBgn0000015) -13124 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1053 chr2L 15190423 15190477 + 36 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 9959 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2095 chr2R 3915588 3915642 + 36 NA TTS (FBgn0263970) ncRNA-TTS (FBgn0263970) 1818 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1102 chr2L 15598309 15598385 + 36 NA Intergenic Intergenic 13622 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1674 chr2L 21838130 21838265 + 36 NA Intergenic Intergenic 9604 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_762 chr2L 11836409 11836463 + 36 NA promoter-TSS (FBgn0261056) protein_coding-promoter-TSS (FBgn0261056) -807 FBgn0261056 FBgn0261056 FBtr0301936 Sfp33A4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3644 chr3L 6101513 6101579 + 36 NA intron (FBgn0005658, intron 4 of 9) protein_coding-intron (FBgn0005658, intron 4 of 9) -3021 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1587 chr2L 20852355 20852412 + 36 NA promoter-TSS (FBgn0032895) protein_coding-promoter-TSS (FBgn0032895) -198 FBgn0032895 FBgn0032895 FBtr0081426 CG9335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1473 chr2L 19746918 19746973 + 36 NA exon (FBgn0032817, exon 7 of 8) protein_coding-exon (FBgn0032817, exon 7 of 8) 9922 FBgn0032817 FBgn0032817 FBtr0081324 CG10631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4812 chr3R 3547546 3547606 + 36 NA promoter-TSS (FBgn0037512) protein_coding-promoter-TSS (FBgn0037512) -563 FBgn0037512 FBgn0037512 FBtr0081738 CG2616 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4462 chr3L 22851318 22851377 + 36 NA Intergenic Intergenic -2188 FBgn0052459 FBgn0052459 FBtr0078578 CG32459 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5257 chr3R 10883145 10883199 + 36 NA exon (FBgn0038282, exon 8 of 8) protein_coding-exon (FBgn0038282, exon 8 of 8) 19755 FBgn0038282 FBgn0038282 FBtr0089376 dpr9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2156 chr2R 4702693 4702747 + 36 NA intron (FBgn0024189, intron 2 of 21) protein_coding-intron (FBgn0024189, intron 2 of 20) -11176 FBgn0050350 FBgn0050350 FBtr0088636 CG30350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5127 chr3R 8608891 8608945 + 36 NA Intergenic Intergenic -5044 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6244 chr3R 24600547 24600623 + 36 NA Intergenic Intergenic -14754 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3662 chr3L 6377735 6377827 + 36 NA Intergenic Intergenic -15911 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3516 chr3L 2318015 2318069 + 36 NA Intergenic Intergenic -4651 FBgn0035331 FBgn0035331 FBtr0330187 DmsR-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6097 chr3R 23315756 23315810 + 36 NA TTS (FBgn0039520) protein_coding-TTS (FBgn0039520) 2134 FBgn0039520 FBgn0039520 FBtr0085184 Gr98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1779 chr2L 22291892 22291946 + 36 NA Intergenic Intergenic 42041 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1643 chr2L 21716633 21716699 + 36 NA exon (FBgn0051619, exon 13 of 19) protein_coding-exon (FBgn0051619, exon 13 of 19) 32484 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6302 chr3R 25255223 25255277 + 36 NA intron (FBgn0004369, intron 7 of 18) protein_coding-intron (FBgn0004369, intron 7 of 18) -50170 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_971 chr2L 14562555 14562625 + 36 NA TTS (FBgn0028913) protein_coding-TTS (FBgn0028913) 1136 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6012 chr3R 22423459 22423513 + 36 NA exon (FBgn0263289, exon 24 of 26) protein_coding-exon (FBgn0263289, exon 24 of 26) -21359 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3860 chr3L 10534177 10534231 + 36 NA intron (FBgn0052062, intron 2 of 13) protein_coding-intron (FBgn0052062, intron 2 of 14) 17978 FBgn0036085 FBgn0036085 FBtr0076291 CG6527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1635 chr2L 21641747 21641824 + 36 NA intron (FBgn0023416, intron 16 of 18) protein_coding-intron (FBgn0023416, intron 16 of 18) 9198 FBgn0023416 FBgn0023416 FBtr0100324 Ac3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3832 chr3L 9592508 9592562 + 36 NA exon (FBgn0036014, exon 1 of 1) protein_coding-exon (FBgn0036014, exon 1 of 1) 447 FBgn0036014 FBgn0036014 FBtr0076379 CG3222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5711 chr3R 16181995 16182071 + 36 NA Intergenic Intergenic -3997 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4097 chr3L 14385940 14385994 + 36 NA Intergenic Intergenic 9858 FBgn0036422 FBgn0036422 FBtr0075729 CG3868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_356 chr2L 5385817 5385935 + 36 NA Intergenic Intergenic -4802 FBgn0262097 FBgn0262097 FBtr0310549 CG42850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4221 chr3L 16526806 16526900 + 36 NA intron (FBgn0263131, intron 2 of 28) protein_coding-intron (FBgn0263131, intron 2 of 30) 9465 FBgn0263131 FBgn0263131 FBtr0307368 CG43373 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5100 chr3R 8120105 8120161 + 36 NA exon (FBgn0003651, exon 3 of 5) protein_coding-exon (FBgn0003651, exon 3 of 5) 13259 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4452 chr3L 22145519 22145577 + 36 NA intron (FBgn0037153, intron 1 of 10) protein_coding-intron (FBgn0037153, intron 1 of 10) 16358 FBgn0037153 FBgn0037153 FBtr0301492 olf413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_188 chr2L 2679203 2679260 + 36 NA intron (FBgn0051690, intron 1 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) 1498 FBgn0051690 FBgn0051690 FBtr0301682 CG31690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5306 chr3R 11593711 11593782 + 36 NA promoter-TSS (FBgn0038357) protein_coding-promoter-TSS (FBgn0038357) -586 FBgn0038357 FBgn0038357 FBtr0083197 CG5623 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_689 chr2L 10675310 10675364 + 36 NA Intergenic Intergenic -2033 FBgn0040496 FBgn0040496 FBtr0080105 CG17104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2409 chr2R 8722183 8722237 + 36 NA Intergenic Intergenic 7853 FBgn0033775 FBgn0033775 FBtr0087820 Cyp9h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5275 chr3R 11260722 11260802 + 36 NA promoter-TSS (FBgn0038339) protein_coding-promoter-TSS (FBgn0038339) -856 FBgn0038339 FBgn0038339 FBtr0113239 CG6118 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2327 chr2R 7437643 7437697 + 36 NA Intergenic Intergenic -22282 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4502 chr3L 23763261 23763318 + 36 NA Intergenic Intergenic -14042 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1899 chr2LHet 156127 156252 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1807 chr2L 22491934 22491997 + 36 NA Intergenic Intergenic 19483 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2525 chr2R 10544629 10544683 + 36 NA exon (FBgn0033952, exon 2 of 2) protein_coding-exon (FBgn0033952, exon 2 of 2) 1604 FBgn0033952 FBgn0033952 FBtr0087482 Adgf-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5020 chr3R 6840131 6840207 + 36 NA intron (FBgn0083950, intron 5 of 13) protein_coding-intron (FBgn0083950, intron 5 of 15) 20964 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6278 chr3R 25020847 25020907 + 36 NA promoter-TSS (FBgn0039647) protein_coding-promoter-TSS (FBgn0039647) -162 FBgn0039647 FBgn0039647 FBtr0113304 CG14509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7001 chrX 1598911 1598965 + 36 NA Intergenic Intergenic 5258 FBgn0025378 FBgn0025378 FBtr0070278 CG3795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3459 chr3L 1177327 1177391 + 36 NA promoter-TSS (FBgn0025525) protein_coding-promoter-TSS (FBgn0025525) -83 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_688 chr2L 10672882 10672936 + 36 NA Intergenic Intergenic -4461 FBgn0040496 FBgn0040496 FBtr0080105 CG17104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3256 chr2RHet 1755814 1755901 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5277 chr3R 11326176 11326237 + 36 NA Intergenic Intergenic 5882 FBgn0038345 FBgn0038345 FBtr0083148 CG5213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_474 chr2L 7357018 7357072 + 36 NA Intergenic Intergenic -7775 FBgn0031903 FBgn0031903 FBtr0303207 Wnt10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5378 chr3R 12350323 12350377 + 36 NA intron (FBgn0259244, intron 2 of 15) protein_coding-intron (FBgn0259244, intron 2 of 16) 21827 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1173 chr2L 16406431 16406524 + 36 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) 11407 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2339 chr2R 7542591 7542657 + 36 NA exon (FBgn0033640, exon 2 of 3) protein_coding-exon (FBgn0033640, exon 2 of 3) 221 FBgn0033640 FBgn0033640 FBtr0088072 CG13198 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7085 chrX 7090252 7090330 + 36 NA exon (FBgn0029939, exon 1 of 4) protein_coding-exon (FBgn0029939, exon 1 of 4) 229 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2624 chr2R 12134232 12134315 + 36 NA exon (FBgn0261612, exon 4 of 7) protein_coding-exon (FBgn0261612, exon 4 of 7) -4834 FBgn0034099 FBgn0034099 FBtr0087188 CG15708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4911 chr3R 5123781 5123835 + 36 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -23684 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2546 chr2R 10830436 10830490 + 36 NA exon (FBgn0033985, exon 1 of 4) protein_coding-exon (FBgn0033985, exon 1 of 4) 347 FBgn0033985 FBgn0033985 FBtr0087408 CG10257 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5753 chr3R 16729807 16729889 + 36 NA TTS (FBgn0044810) protein_coding-TTS (FBgn0044810) 1392 FBgn0044810 FBgn0044810 FBtr0083985 TotX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6114 chr3R 23542337 23542421 + 36 NA Intergenic Intergenic 9555 FBgn0039544 FBgn0039544 FBtr0300766 CG12877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4247 chr3L 16923724 16923862 + 36 NA TTS (FBgn0036678) protein_coding-TTS (FBgn0036678) -3259 FBgn0036677 FBgn0036677 FBtr0075307 CG13023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5013 chr3R 6735907 6735977 + 36 NA Intergenic Intergenic -16690 FBgn0037855 FBgn0037855 FBtr0302935 CG6621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1723 chr2L 22023566 22023622 + 36 NA exon (FBgn0028979, exon 3 of 3) protein_coding-exon (FBgn0028979, exon 3 of 3) 3559 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6650 chr4 1010194 1010315 + 36 NA promoter-TSS (FBgn0019650) protein_coding-promoter-TSS (FBgn0019650) -97 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1920 chr2R 139256 139351 + 36 NA Intergenic Intergenic -8859 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_240 chr2L 3657616 3657670 + 36 NA promoter-TSS (FBgn0000721) protein_coding-promoter-TSS (FBgn0000721) -5102 FBgn0085369 FBgn0085369 FBtr0302391 CG34340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4494 chr3L 23716263 23716339 + 36 NA Intergenic Intergenic -3628 FBgn0058298 FBgn0058298 FBtr0111169 CG40298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1291 chr2L 17615428 17615501 + 36 NA Intergenic Intergenic 10882 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6608 chr4 543569 543640 + 36 NA exon (FBgn0004607, exon 4 of 14) protein_coding-exon (FBgn0004607, exon 4 of 14) 21168 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2430 chr2R 8993214 8993273 + 36 NA Intergenic Intergenic -10567 FBgn0033792 FBgn0033792 FBtr0087722 CG13325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6564 chr3RHet 1102773 1102827 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3177 chr2RHet 505561 505643 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5045 chr3R 7170807 7170861 + 36 NA intron (FBgn0004595, intron 2 of 7) protein_coding-intron (FBgn0004595, intron 2 of 7) 8019 FBgn0026064 FBgn0026064 FBtr0301426 KP78a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_50 chr2L 922752 922889 + 36 NA promoter-TSS (FBgn0028481) protein_coding-promoter-TSS (FBgn0028481) 27 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6580 chr3RHet 1975526 1975656 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4644 chr3R 1227354 1227409 + 36 NA exon (FBgn0037323, exon 2 of 3) protein_coding-exon (FBgn0037323, exon 2 of 3) -2463 FBgn0037322 FBgn0037322 FBtr0078797 Or83a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1663 chr2L 21776183 21776238 + 36 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) 7855 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2640 chr2R 12335816 12335893 + 36 NA TTS (FBgn0034129) protein_coding-TTS (FBgn0034129) 2363 FBgn0034129 FBgn0034129 FBtr0087159 CG15925 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2534 chr2R 10620711 10620766 + 36 NA Intergenic Intergenic 6009 FBgn0263376 FBgn0263376 FBtr0309057 CR43428 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1129 chr2L 15940647 15940701 + 36 NA promoter-TSS (FBgn0028857) protein_coding-promoter-TSS (FBgn0028857) -767 FBgn0028857 FBgn0028857 FBtr0300613 CG12448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3445 chr3L 917130 917195 + 36 NA intron (FBgn0264574, intron 2 of 14) protein_coding-intron (FBgn0264574, intron 2 of 12) 8050 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1648 chr2L 21725034 21725104 + 36 NA exon (FBgn0051619, exon 16 of 19) protein_coding-exon (FBgn0051619, exon 16 of 19) 32397 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6502 chr3R 27385478 27385539 + 36 NA intron (FBgn0039852, intron 4 of 8) protein_coding-intron (FBgn0039852, intron 4 of 8) -12357 FBgn0028968 FBgn0028968 FBtr0330096 gammaCop protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2757 chr2R 14364081 14364141 + 36 NA exon (FBgn0028496, exon 3 of 19) protein_coding-exon (FBgn0028496, exon 3 of 19) 21385 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3086 chr2R 20225908 20225964 + 36 NA Intergenic Intergenic -4107 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1893 chr2L 22974117 22974173 + 36 NA Intergenic Intergenic 12408 FBgn0262887 FBgn0262887 FBtr0306299 CR43242 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3472 chr3L 1436722 1436790 + 36 NA exon (FBgn0043865, exon 4 of 6) protein_coding-exon (FBgn0043865, exon 4 of 6) 1116 FBgn0043865 FBgn0043865 FBtr0301788 SA-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2064 chr2R 3308261 3308315 + 36 NA intron (FBgn0003460, intron 1 of 6) protein_coding-intron (FBgn0003460, intron 1 of 6) 1751 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7173 chrX 12878817 12878871 + 36 NA exon (FBgn0052643, exon 1 of 1) protein_coding-exon (FBgn0052643, exon 1 of 1) 254 FBgn0052643 FBgn0052643 FBtr0073716 CG32643 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2540 chr2R 10685965 10686019 + 36 NA exon (FBgn0001319, exon 1 of 11) protein_coding-exon (FBgn0001319, exon 1 of 11) -1460 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5278 chr3R 11327735 11327789 + 36 NA Intergenic Intergenic 6798 FBgn0038346 FBgn0038346 FBtr0083157 CG14872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3874 chr3L 10612838 10612892 + 36 NA Intergenic Intergenic 3811 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6548 chr3RHet 556433 556576 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4318 chr3L 17698796 17698850 + 36 NA intron (FBgn0052183, intron 1 of 9) protein_coding-intron (FBgn0052183, intron 1 of 9) 14131 FBgn0261294 FBgn0261294 FBtr0091928 CheB74a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5249 chr3R 10692170 10692224 + 36 NA Intergenic Intergenic -6637 FBgn0038267 FBgn0038267 FBtr0083012 CG17304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6619 chr4 621671 621725 + 36 NA exon (FBgn0028996, exon 4 of 4) protein_coding-exon (FBgn0028996, exon 4 of 4) 6653 FBgn0028996 FBgn0028996 FBtr0089104 onecut protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2032 chr2R 2720220 2720308 + 36 NA promoter-TSS (FBgn0085244) protein_coding-promoter-TSS (FBgn0085244) -968 FBgn0085244 FBgn0085244 FBtr0112408 CG34215 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5559 chr3R 14371581 14371641 + 36 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) -303 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_725 chr2L 11328647 11328775 + 36 NA Intergenic Intergenic 14552 FBgn0032360 FBgn0032360 FBtr0080251 CG14926 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3474 chr3L 1474925 1474979 + 36 NA TTS (FBgn0020248) protein_coding-TTS (FBgn0020248) 297 FBgn0003138 FBgn0003138 FBtr0072718 Ptp61F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1966 chr2R 857255 857317 + 36 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 20114 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4089 chr3L 14194290 14194344 + 36 NA intron (FBgn0013718, intron 4 of 10) protein_coding-intron (FBgn0013718, intron 4 of 9) -2106 FBgn0052141 FBgn0052141 FBtr0075735 CG32141 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_209 chr2L 3099343 3099397 + 36 NA intron (FBgn0015600, intron 2 of 8) protein_coding-intron (FBgn0015600, intron 4 of 10) 8772 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3200 chr2RHet 705466 705522 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4056 chr3L 13751317 13751430 + 36 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 45127 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3026 chr2R 19168847 19168901 + 36 NA Intergenic Intergenic 2762 FBgn0034840 FBgn0034840 FBtr0072046 CG3124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6532 chr3R 27820179 27820236 + 36 NA Intergenic Intergenic 7636 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1572 chr2L 20713169 20713228 + 36 NA exon (FBgn0014859, exon 1 of 5) protein_coding-exon (FBgn0014859, exon 1 of 5) 1218 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4889 chr3R 4529001 4529068 + 36 NA intron (FBgn0037612, intron 1 of 3) protein_coding-intron (FBgn0037612, intron 1 of 3) -8712 FBgn0001180 FBgn0001180 FBtr0081951 hb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1117 chr2L 15805689 15805743 + 36 NA Intergenic Intergenic 6425 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4737 chr3R 2615279 2615333 + 36 NA Intergenic Intergenic -2252 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5026 chr3R 6932711 6932812 + 36 NA Intergenic Intergenic 8667 FBgn0037860 FBgn0037860 FBtr0082380 CG6629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1626 chr2L 21381279 21381375 + 36 NA promoter-TSS (FBgn0032946) protein_coding-promoter-TSS (FBgn0032946) 1327 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2306 chr2R 7287343 7287414 + 36 NA promoter-TSS (FBgn0050506) tRNA-promoter-TSS (FBgn0050506) -32 FBgn0050506 FBgn0050506 FBtr0088145 tRNA:CR30506 tRNA Nup98-S2-pascual-garcia2017_R1_peak_834 chr2L 12875961 12876015 + 36 NA Intergenic Intergenic -36542 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3016 chr2R 18935118 18935172 + 36 NA exon (FBgn0003900, exon 1 of 2) protein_coding-exon (FBgn0003900, exon 1 of 2) 1296 FBgn0003900 FBgn0003900 FBtr0100130 twi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3357 chr2RHet 2249583 2249637 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4898 chr3R 4790389 4790443 + 36 NA Intergenic Intergenic -1733 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6592 chr3RHet 2493364 2493422 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_338 chr2L 4887808 4887920 + 36 NA Intergenic Intergenic -2131 FBgn0031644 FBgn0031644 FBtr0077390 CG15625 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7042 chrX 4178264 4178319 + 36 NA Intergenic Intergenic -6297 FBgn0040905 FBgn0040905 FBtr0070659 CG15578 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2110 chr2R 4088701 4088755 + 36 NA intron (FBgn0053087, intron 2 of 22) protein_coding-intron (FBgn0053087, intron 2 of 22) 4483 FBgn0033275 FBgn0033275 FBtr0088804 CG14756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6878 chrUextra 275919 276036 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3380 chr2RHet 2382666 2382753 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5719 chr3R 16266184 16266284 + 36 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 1 of 19) 32247 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_30 chr2L 742589 742664 + 36 NA promoter-TSS (FBgn0026438) protein_coding-promoter-TSS (FBgn0026438) 1769 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3985 chr3L 12590758 12590812 + 36 NA Intergenic Intergenic -11946 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1584 chr2L 20843673 20843783 + 36 NA intron (FBgn0051676, intron 1 of 2) protein_coding-intron (FBgn0051676, intron 1 of 2) 2928 FBgn0051676 FBgn0051676 FBtr0081424 CG31676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5201 chr3R 9699327 9699382 + 36 NA exon (FBgn0008646, exon 2 of 4) protein_coding-exon (FBgn0008646, exon 2 of 4) 1284 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2296 chr2R 7116209 7116264 + 36 NA intron (FBgn0050021, intron 4 of 7) protein_coding-intron (FBgn0050021, intron 5 of 8) 3820 FBgn0050021 FBgn0050021 FBtr0114570 metro protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5985 chr3R 22137274 22137380 + 36 NA Intergenic Intergenic 13670 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7009 chrX 1887964 1888024 + 36 NA exon (FBgn0264562, exon 7 of 12) protein_coding-exon (FBgn0264562, exon 7 of 12) 15403 FBgn0023545 FBgn0023545 FBtr0070347 CG4406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3881 chr3L 10698804 10698858 + 36 NA Intergenic Intergenic -8854 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3324 chr2RHet 2069311 2069389 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2381 chr2R 8131094 8131151 + 36 NA TTS (FBgn0262889) protein_coding-TTS (FBgn0262889) 1045 FBgn0262889 FBgn0262889 FBtr0306303 CG43244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5438 chr3R 13059024 13059083 + 36 NA exon (FBgn0038494, exon 5 of 6) protein_coding-exon (FBgn0038494, exon 5 of 6) -13447 FBgn0051262 FBgn0051262 FBtr0302853 CG31262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5147 chr3R 8772738 8772802 + 36 NA Intergenic Intergenic -14704 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_292 chr2L 4359462 4359520 + 36 NA Intergenic Intergenic 6516 FBgn0031596 FBgn0031596 FBtr0077428 CG15429 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6579 chr3RHet 1918772 1918838 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5441 chr3R 13122463 13122541 + 36 NA Intergenic Intergenic 8992 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1055 chr2L 15204601 15204655 + 36 NA TTS (FBgn0263089) ncRNA-TTS (FBgn0263089) 2369 FBgn0263089 FBgn0263089 FBtr0307107 CR43357 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3239 chr2RHet 1448677 1448761 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1374 chr2L 18391121 18391216 + 36 NA exon (FBgn0000636, exon 6 of 8) protein_coding-exon (FBgn0000636, exon 6 of 8) 12542 FBgn0085200 FBgn0085200 FBtr0305066 CG34171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2418 chr2R 8858147 8858201 + 36 NA intron (FBgn0005624, intron 3 of 4) protein_coding-intron (FBgn0005624, intron 3 of 4) 10320 FBgn0005624 FBgn0005624 FBtr0087798 Psc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4832 chr3R 3892820 3892899 + 36 NA intron (FBgn0037546, intron 1 of 3) protein_coding-intron (FBgn0037546, intron 1 of 3) 7853 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6842 chrU 5633609 5633663 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6260 chr3R 24751633 24751688 + 36 NA TTS (FBgn0039616) protein_coding-TTS (FBgn0039616) 2894 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2555 chr2R 10970481 10970535 + 36 NA Intergenic Intergenic -26762 FBgn0053467 FBgn0053467 FBtr0089861 CG33467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3673 chr3L 6681341 6681395 + 36 NA Intergenic Intergenic 4386 FBgn0035710 FBgn0035710 FBtr0076960 SP1173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1481 chr2L 19852173 19852227 + 36 NA intron (FBgn0263873, intron 1 of 14) protein_coding-intron (FBgn0263873, intron 2 of 15) -3901 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6964 chrUextra 28031571 28031627 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6795 chrU 2072019 2072075 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7112 chrX 8700045 8700115 + 36 NA promoter-TSS (FBgn0026411) protein_coding-promoter-TSS (FBgn0026411) -20694 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5143 chr3R 8768023 8768077 + 36 NA Intergenic Intergenic -19424 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3141 chr2RHet 58023 58077 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2494 chr2R 9841586 9841681 + 36 NA promoter-TSS (FBgn0262739) protein_coding-promoter-TSS (FBgn0262739) -67 FBgn0050481 FBgn0050481 FBtr0100285 mRpL53 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4319 chr3L 17714989 17715049 + 36 NA intron (FBgn0052183, intron 5 of 9) protein_coding-intron (FBgn0052183, intron 5 of 9) -2065 FBgn0261294 FBgn0261294 FBtr0091928 CheB74a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2779 chr2R 14844859 14844923 + 36 NA exon (FBgn0034408, exon 6 of 8) protein_coding-exon (FBgn0034408, exon 6 of 8) 13765 FBgn0014269 FBgn0014269 FBtr0086601 prod protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4550 chr3LHet 553451 553505 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5523 chr3R 13979578 13979633 + 36 NA TTS (FBgn0038567) protein_coding-TTS (FBgn0038567) 1763 FBgn0038567 FBgn0038567 FBtr0083546 CG14316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5142 chr3R 8764040 8764124 + 36 NA Intergenic Intergenic 22238 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_886 chr2L 13740703 13740776 + 36 NA Intergenic Intergenic 4599 FBgn0051813 FBgn0051813 FBtr0080531 CG31813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6277 chr3R 25017987 25018048 + 36 NA intron (FBgn0039647, intron 1 of 7) protein_coding-intron (FBgn0039647, intron 1 of 6) 2698 FBgn0039647 FBgn0039647 FBtr0113304 CG14509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5950 chr3R 21787021 21787110 + 36 NA promoter-TSS (FBgn0000206) protein_coding-promoter-TSS (FBgn0000206) -651 FBgn0000206 FBgn0000206 FBtr0084949 boss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6998 chrX 1541398 1541452 + 36 NA exon (FBgn0000210, exon 8 of 8) protein_coding-exon (FBgn0000210, exon 8 of 8) -4929 FBgn0029584 FBgn0029584 FBtr0305287 CG11509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3998 chr3L 12722554 12722711 + 36 NA Intergenic Intergenic 5079 FBgn0261933 FBgn0261933 FBtr0075952 SmD1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3284 chr2RHet 1909980 1910080 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5300 chr3R 11576200 11576346 + 36 NA Intergenic Intergenic 5897 FBgn0038355 FBgn0038355 FBtr0083167 CG4520 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3456 chr3L 1115246 1115310 + 36 NA Intergenic Intergenic -14189 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4 chr2L 18894 18955 + 36 NA promoter-TSS (FBgn0002121) protein_coding-promoter-TSS (FBgn0002121) 2452 FBgn0002121 FBgn0002121 FBtr0078171 l(2)gl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3108 chr2R 20582184 20582250 + 36 NA promoter-TSS (FBgn0035050) protein_coding-promoter-TSS (FBgn0035050) -308 FBgn0035050 FBgn0035050 FBtr0072442 ST6Gal protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1915 chr2LHet 286639 286749 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1960 chr2R 841793 842009 + 36 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 4729 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5159 chr3R 8974394 8974482 + 36 NA intron (FBgn0260793, intron 2 of 3) protein_coding-intron (FBgn0038118, intron 11 of 17) 6948 FBgn0260793 FBgn0260793 FBtr0330143 2mit protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2082 chr2R 3776627 3776690 + 36 NA promoter-TSS (FBgn0050377) protein_coding-promoter-TSS (FBgn0050377) -922 FBgn0050377 FBgn0050377 FBtr0088844 CG30377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5280 chr3R 11351118 11351176 + 36 NA Intergenic Intergenic 6048 FBgn0051296 FBgn0051296 FBtr0083155 CG31296 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1243 chr2L 17127570 17127624 + 36 NA Intergenic Intergenic -1636 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2761 chr2R 14397876 14397942 + 36 NA Intergenic Intergenic -4220 FBgn0262476 FBgn0262476 FBtr0304867 CG43066 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4208 chr3L 16311355 16311417 + 36 NA TTS (FBgn0036605) protein_coding-TTS (FBgn0036605) 262 FBgn0042201 FBgn0042201 FBtr0075369 Nplp3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_191 chr2L 2698059 2698113 + 36 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) -1649 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5025 chr3R 6929624 6929692 + 36 NA Intergenic Intergenic 11770 FBgn0037860 FBgn0037860 FBtr0082380 CG6629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5751 chr3R 16717374 16717457 + 36 NA promoter-TSS (FBgn0051333) tRNA-promoter-TSS (FBgn0051333) 35 FBgn0051333 FBgn0051333 FBtr0083977 tRNA:CR31333 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1546 chr2L 20525743 20525817 + 36 NA Intergenic Intergenic 30674 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_268 chr2L 4158422 4158554 + 36 NA Intergenic Intergenic 7646 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4447 chr3L 21751514 21751585 + 36 NA TTS (FBgn0037131) protein_coding-TTS (FBgn0037131) 1292 FBgn0037131 FBgn0037131 FBtr0078435 CG14564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_953 chr2L 14458782 14458836 + 36 NA Intergenic Intergenic -7887 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1003 chr2L 14732938 14733002 + 36 NA Intergenic Intergenic -2873 FBgn0051835 FBgn0051835 FBtr0080667 CG31835 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3484 chr3L 1695329 1695456 + 36 NA exon (FBgn0035257, exon 2 of 2) protein_coding-exon (FBgn0035257, exon 2 of 2) 775 FBgn0035257 FBgn0035257 FBtr0072764 CG12011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4784 chr3R 3100821 3100881 + 36 NA exon (FBgn0259172, exon 2 of 3) protein_coding-exon (FBgn0259172, exon 2 of 3) 3537 FBgn0037493 FBgn0037493 FBtr0081579 CG10032 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5914 chr3R 20930388 20930450 + 36 NA exon (FBgn0054027, exon 12 of 15) protein_coding-exon (FBgn0054027, exon 12 of 15) 4335 FBgn0054027 FBgn0054027 FBtr0100082 CG34027 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4984 chr3R 6416925 6416979 + 36 NA intron (FBgn0001235, intron 4 of 12) protein_coding-intron (FBgn0001235, intron 4 of 11) 14440 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6454 chr3R 26915437 26915491 + 36 NA TTS (FBgn0039816) protein_coding-TTS (FBgn0039816) 7576 FBgn0039816 FBgn0039816 FBtr0085741 CG11317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6865 chrUextra 196943 197022 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_602 chr2L 8879518 8879615 + 36 NA Intergenic Intergenic -11923 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3520 chr3L 2523418 2523474 + 36 NA intron (FBgn0010905, intron 4 of 16) protein_coding-intron (FBgn0010905, intron 4 of 15) 3527 FBgn0260480 FBgn0260480 FBtr0072962 CG32295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5135 chr3R 8651251 8651309 + 36 NA Intergenic Intergenic -8529 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5366 chr3R 12242100 12242181 + 36 NA Intergenic Intergenic 8642 FBgn0051497 FBgn0051497 FBtr0083317 tRNA:CR31497 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1503 chr2L 20082838 20082920 + 36 NA exon (FBgn0263773, exon 2 of 2) protein_coding-exon (FBgn0263773, exon 2 of 2) -2683 FBgn0263773 FBgn0263773 FBtr0310558 fok protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2661 chr2R 12586761 12586817 + 36 NA exon (FBgn0050463, exon 4 of 12) protein_coding-exon (FBgn0050463, exon 4 of 12) 7586 FBgn0013763 FBgn0013763 FBtr0087111 CG5210 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1831 chr2L 22602234 22602288 + 36 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 42266 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6331 chr3R 25476066 25476121 + 36 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 9613 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6604 chr4 523761 523820 + 36 NA intron (FBgn0004607, intron 1 of 12) protein_coding-intron (FBgn0004607, intron 1 of 13) 1354 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5339 chr3R 11951720 11951774 + 36 NA Intergenic Intergenic -2704 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3304 chr2RHet 1942048 1942110 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6021 chr3R 22481616 22481670 + 36 NA promoter-TSS (FBgn0243586) protein_coding-promoter-TSS (FBgn0243586) -525 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4907 chr3R 5109821 5109944 + 36 NA Intergenic Intergenic 17128 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5430 chr3R 12791837 12791900 + 36 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -9058 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2812 chr2R 15515327 15515381 + 36 NA intron (FBgn0003435, intron 2 of 10) protein_coding-intron (FBgn0003435, intron 2 of 9) -7430 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1530 chr2L 20399278 20399375 + 36 NA promoter-TSS (FBgn0032857) protein_coding-promoter-TSS (FBgn0032857) 68 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3530 chr3L 2879559 2879613 + 36 NA promoter-TSS (FBgn0263392) protein_coding-promoter-TSS (FBgn0263392) -428 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6162 chr3R 23949628 23949682 + 36 NA Intergenic Intergenic -22947 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4542 chr3L 24501149 24501213 + 36 NA Intergenic Intergenic -26008 FBgn0040045 FBgn0040045 FBtr0307117 CR12460 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6680 chrU 36542 36634 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1816 chr2L 22551702 22551786 + 36 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 79262 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3000 chr2R 18758771 18758839 + 36 NA promoter-TSS (FBgn0034788) protein_coding-promoter-TSS (FBgn0034788) -13 FBgn0034788 FBgn0034788 FBtr0071899 CG13532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6028 chr3R 22508076 22508130 + 36 NA promoter-TSS (FBgn0250908) protein_coding-promoter-TSS (FBgn0250908) -415 FBgn0250908 FBgn0250908 FBtr0290328 beat-VII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6820 chrU 2994135 2994189 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1542 chr2L 20511246 20511385 + 36 NA Intergenic Intergenic 16209 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1064 chr2L 15286934 15287014 + 36 NA Intergenic Intergenic 1962 FBgn0028853 FBgn0028853 FBtr0080729 CG15263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1122 chr2L 15860823 15860884 + 36 NA Intergenic Intergenic -2409 FBgn0261924 FBgn0261924 FBtr0303588 CG42791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3763 chr3L 8153334 8153388 + 36 NA promoter-TSS (FBgn0264478) protein_coding-promoter-TSS (FBgn0264478) -487 FBgn0264478 FBgn0264478 FBtr0332759 CG43886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7166 chrX 12746356 12746410 + 36 NA intron (FBgn0259171, intron 2 of 9) protein_coding-intron (FBgn0259171, intron 2 of 9) 5372 FBgn0030429 FBgn0030429 FBtr0073699 CG4661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2989 chr2R 18515343 18515397 + 36 NA exon (FBgn0053143, exon 4 of 8) protein_coding-exon (FBgn0053143, exon 4 of 8) 311 FBgn0053143 FBgn0053143 FBtr0071859 CG33143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1225 chr2L 17022317 17022387 + 36 NA Intergenic Intergenic -9298 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2874 chr2R 16405474 16405533 + 36 NA Intergenic Intergenic -4829 FBgn0034510 FBgn0034510 FBtr0086295 CG13426 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_349 chr2L 5216140 5216194 + 36 NA exon (FBgn0250847, exon 3 of 5) protein_coding-exon (FBgn0250847, exon 3 of 5) 366 FBgn0250847 FBgn0250847 FBtr0110802 CG14034 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2721 chr2R 13822980 13823050 + 36 NA Intergenic Intergenic 21060 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6420 chr3R 26684054 26684115 + 36 NA Intergenic Intergenic 6047 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3317 chr2RHet 1987374 1987434 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6699 chrU 127649 127705 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6117 chr3R 23560400 23560509 + 36 NA Intergenic Intergenic -1808 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6396 chr3R 26174649 26174766 + 36 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) 38634 FBgn0015222 FBgn0015222 FBtr0332170 Fer1HCH protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1686 chr2L 21872093 21872151 + 36 NA Intergenic Intergenic -22105 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4510 chr3L 23869684 23869738 + 36 NA intron (FBgn0058470, intron 9 of 12) protein_coding-intron (FBgn0058470, intron 9 of 12) 6531 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3215 chr2RHet 948961 949055 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2969 chr2R 18168677 18168731 + 36 NA exon (FBgn0020307, exon 4 of 6) protein_coding-exon (FBgn0020307, exon 4 of 6) 10279 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1864 chr2L 22713574 22713852 + 36 NA Intergenic Intergenic 22584 FBgn0262947 FBgn0262947 FBtr0306552 CG43266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_664 chr2L 10036842 10036930 + 36 NA exon (FBgn0027600, exon 3 of 6) protein_coding-exon (FBgn0027600, exon 3 of 6) 4192 FBgn0027600 FBgn0027600 FBtr0079934 obst-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3569 chr3L 3985298 3985415 + 36 NA exon (FBgn0004880, exon 1 of 2) protein_coding-exon (FBgn0004880, exon 1 of 2) 1460 FBgn0004880 FBgn0004880 FBtr0073165 scrt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4446 chr3L 21701410 21701464 + 36 NA Intergenic Intergenic -1972 FBgn0052447 FBgn0052447 FBtr0078461 CG32447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_812 chr2L 12666668 12666722 + 36 NA TTS (FBgn0032442) protein_coding-TTS (FBgn0032442) 3019 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4761 chr3R 2826389 2826495 + 36 NA Intergenic Intergenic -51615 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5370 chr3R 12315134 12315229 + 36 NA exon (FBgn0038439, exon 6 of 12) protein_coding-exon (FBgn0038439, exon 6 of 12) -5056 FBgn0038438 FBgn0038438 FBtr0083307 Der-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2446 chr2R 9210515 9210569 + 36 NA Intergenic Intergenic 6404 FBgn0262391 FBgn0262391 FBtr0304273 mir-184 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1983 chr2R 1403169 1403229 + 36 NA intron (FBgn0050438, intron 1 of 6) protein_coding-intron (FBgn0050438, intron 1 of 5) -7828 FBgn0033027 FBgn0033027 FBtr0302019 TpnC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_836 chr2L 12880977 12881039 + 36 NA Intergenic Intergenic -31522 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2118 chr2R 4219411 4219465 + 36 NA intron (FBgn0261588, intron 1 of 10) protein_coding-intron (FBgn0261588, intron 1 of 10) 4433 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_866 chr2L 13429912 13430041 + 36 NA intron (FBgn0263354, intron 2 of 8) protein_coding-intron (FBgn0263354, intron 2 of 8) -5646 FBgn0026760 FBgn0026760 FBtr0080502 Tehao protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2415 chr2R 8797601 8797655 + 36 NA Intergenic Intergenic -5874 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_701 chr2L 10831383 10831437 + 36 NA exon (FBgn0011676, exon 2 of 19) protein_coding-exon (FBgn0011676, exon 2 of 19) 6101 FBgn0011676 FBgn0011676 FBtr0100487 Nos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6752 chrU 1046062 1046178 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6683 chrU 42462 42519 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3564 chr3L 3882068 3882122 + 36 NA Intergenic Intergenic 2706 FBgn0264518 FBgn0264518 FBtr0333143 CR43917 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4985 chr3R 6426524 6426584 + 36 NA intron (FBgn0001235, intron 2 of 12) protein_coding-intron (FBgn0001235, intron 2 of 11) 4838 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1393 chr2L 18760904 18760968 + 36 NA Intergenic Intergenic 12901 FBgn0264348 FBgn0264348 FBtr0332018 CR43804 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2623 chr2R 12132847 12132909 + 36 NA intron (FBgn0261612, intron 6 of 8) protein_coding-intron (FBgn0261612, intron 4 of 6) -3439 FBgn0034099 FBgn0034099 FBtr0087188 CG15708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3119 chr2R 20777502 20777556 + 36 NA exon (FBgn0035076, exon 1 of 4) protein_coding-exon (FBgn0035076, exon 1 of 4) 1016 FBgn0035076 FBgn0035076 FBtr0072420 Ance-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2750 chr2R 14267303 14267368 + 36 NA Intergenic Intergenic 2014 FBgn0262838 FBgn0262838 FBtr0306078 CG43202 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7014 chrX 2418664 2418718 + 36 NA intron (FBgn0261451, intron 2 of 31) protein_coding-intron (FBgn0261451, intron 2 of 45) 20127 FBgn0263531 FBgn0263531 FBtr0309618 mir-4955 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_432 chr2L 6576907 6576975 + 36 NA exon (FBgn0031835, exon 8 of 16) protein_coding-exon (FBgn0031835, exon 8 of 16) -10354 FBgn0031834 FBgn0031834 FBtr0079330 CG13766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_444 chr2L 6821799 6821861 + 36 NA promoter-TSS (FBgn0051632) protein_coding-promoter-TSS (FBgn0051632) -487 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6201 chr3R 24229661 24229732 + 36 NA Intergenic Intergenic -14234 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3283 chr2RHet 1909451 1909548 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_569 chr2L 8781133 8781187 + 36 NA promoter-TSS (FBgn0032069) protein_coding-promoter-TSS (FBgn0032069) 91 FBgn0032069 FBgn0032069 FBtr0079741 CG9468 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2924 chr2R 17336448 17336510 + 36 NA intron (FBgn0010415, intron 2 of 6) protein_coding-intron (FBgn0010415, intron 2 of 5) -31910 FBgn0010415 FBgn0010415 FBtr0301557 Sdc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1690 chr2L 21883652 21883736 + 36 NA Intergenic Intergenic -10533 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5129 chr3R 8627587 8627677 + 36 NA Intergenic Intergenic 15119 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4521 chr3L 24031919 24031973 + 36 NA Intergenic Intergenic 10331 FBgn0058045 FBgn0058045 FBtr0331586 CG40045 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6075 chr3R 23140187 23140243 + 36 NA exon (FBgn0039510, exon 12 of 32) protein_coding-exon (FBgn0039510, exon 12 of 32) 7832 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_908 chr2L 14128434 14128489 + 36 NA Intergenic Intergenic -6030 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_413 chr2L 6154706 6154845 + 36 NA exon (FBgn0051639, exon 2 of 3) protein_coding-exon (FBgn0051639, exon 2 of 3) 313 FBgn0051639 FBgn0051639 FBtr0079208 CG31639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5713 chr3R 16201118 16201186 + 36 NA Intergenic Intergenic 15122 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3906 chr3L 11024881 11024938 + 36 NA Intergenic Intergenic 4230 FBgn0052081 FBgn0052081 FBtr0076198 CG32081 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6660 chr4 1026706 1026824 + 36 NA exon (FBgn0019650, exon 9 of 9) protein_coding-exon (FBgn0019650, exon 9 of 9) 16414 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1532 chr2L 20404289 20404345 + 36 NA Intergenic Intergenic -4923 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6784 chrU 1922733 1922787 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2619 chr2R 12106856 12106910 + 36 NA promoter-TSS (FBgn0050239) tRNA-promoter-TSS (FBgn0050239) 67 FBgn0050238 FBgn0050238 FBtr0087197 tRNA:CR30238 tRNA Nup98-S2-pascual-garcia2017_R1_peak_331 chr2L 4807286 4807340 + 36 NA Intergenic Intergenic -5390 FBgn0031629 FBgn0031629 FBtr0332595 Clect27 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5120 chr3R 8485235 8485298 + 36 NA exon (FBgn0038072, exon 6 of 8) protein_coding-exon (FBgn0038072, exon 6 of 8) -3287 FBgn0038073 FBgn0038073 FBtr0300770 CG14395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3085 chr2R 20225131 20225235 + 36 NA Intergenic Intergenic -3354 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7139 chrX 10629944 10629999 + 36 NA intron (FBgn0052676, intron 1 of 3) protein_coding-intron (FBgn0052676, intron 1 of 3) -8564 FBgn0003204 FBgn0003204 FBtr0071496 ras protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3195 chr2RHet 662876 662941 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1103 chr2L 15600746 15600818 + 36 NA Intergenic Intergenic 11187 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1262 chr2L 17266949 17267016 + 36 NA Intergenic Intergenic -6250 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6058 chr3R 22880548 22880612 + 36 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) 5638 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1707 chr2L 21966391 21966456 + 36 NA Intergenic Intergenic 26510 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5371 chr3R 12317617 12317684 + 36 NA exon (FBgn0038439, exon 3 of 12) protein_coding-exon (FBgn0038439, exon 3 of 12) 3491 FBgn0038439 FBgn0038439 FBtr0301702 Cad89D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5153 chr3R 8889870 8889953 + 36 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 6430 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_84 chr2L 1233695 1233749 + 36 NA Intergenic Intergenic -6316 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2591 chr2R 11545548 11545614 + 36 NA TTS (FBgn0262403) pre_miRNA-TTS (FBgn0262403) 954 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7038 chrX 3989318 3989375 + 36 NA Intergenic Intergenic 5722 FBgn0029693 FBgn0029693 FBtr0070671 CG6379 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_985 chr2L 14624999 14625053 + 36 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 8757 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1456 chr2L 19634604 19634727 + 36 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 48042 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5208 chr3R 9761015 9761096 + 36 NA Intergenic Intergenic 8069 FBgn0038188 FBgn0038188 FBtr0082879 Art9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6478 chr3R 27126894 27126948 + 36 NA Intergenic Intergenic 4041 FBgn0039840 FBgn0039840 FBtr0085766 CG11340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5553 chr3R 14343688 14343753 + 36 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 27588 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3252 chr2RHet 1713888 1713945 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4793 chr3R 3152505 3152559 + 36 NA Intergenic Intergenic -9603 FBgn0037498 FBgn0037498 FBtr0081591 CG10029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_187 chr2L 2654631 2654691 + 36 NA promoter-TSS (FBgn0031443) protein_coding-promoter-TSS (FBgn0031443) 612 FBgn0026395 FBgn0026395 FBtr0077698 Or23a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6295 chr3R 25195943 25196020 + 36 NA Intergenic Intergenic -50645 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1299 chr2L 17701077 17701131 + 36 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -3577 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1150 chr2L 16099687 16099763 + 36 NA Intergenic Intergenic 4716 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5721 chr3R 16304592 16304663 + 36 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 2 of 17) 5646 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6432 chr3R 26745357 26745454 + 36 NA intron (FBgn0020912, intron 2 of 4) protein_coding-intron (FBgn0020912, intron 2 of 4) 6795 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2780 chr2R 14893877 14893938 + 36 NA exon (FBgn0034412, exon 9 of 13) protein_coding-exon (FBgn0034412, exon 9 of 13) 11706 FBgn0263473 FBgn0263473 FBtr0309772 snoRNA:abba-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1586 chr2L 20851168 20851241 + 36 NA TTS (FBgn0032894) protein_coding-TTS (FBgn0032894) -1377 FBgn0032895 FBgn0032895 FBtr0081426 CG9335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7141 chrX 10806847 10806901 + 36 NA exon (FBgn0264502, exon 2 of 8) protein_coding-exon (FBgn0264502, exon 2 of 8) 7074 FBgn0264502 FBgn0264502 FBtr0332933 CG43901 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5516 chr3R 13910589 13910643 + 36 NA Intergenic Intergenic 3773 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2633 chr2R 12283336 12283390 + 36 NA intron (FBgn0264273, intron 1 of 15) protein_coding-intron (FBgn0264273, intron 1 of 15) 9334 FBgn0264273 FBgn0264273 FBtr0100001 Sema-2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_469 chr2L 7301676 7301731 + 36 NA Intergenic Intergenic -5458 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6540 chr3RHet 68000 68079 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3077 chr2R 20104142 20104196 + 36 NA intron (FBgn0050419, intron 1 of 1) protein_coding-intron (FBgn0050419, intron 1 of 1) -9723 FBgn0034990 FBgn0034990 FBtr0072276 CG11406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1780 chr2L 22293482 22293567 + 36 NA Intergenic Intergenic 43646 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_545 chr2L 8646742 8646797 + 36 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -26383 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2181 chr2R 4958872 4958929 + 36 NA intron (FBgn0011746, intron 1 of 4) protein_coding-intron (FBgn0011746, intron 1 of 4) 2294 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4476 chr3L 23423823 23423878 + 36 NA Intergenic Intergenic 91424 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4583 chr3LHet 2418331 2418385 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7008 chrX 1858126 1858181 + 36 NA intron (FBgn0264562, intron 3 of 11) protein_coding-intron (FBgn0264562, intron 3 of 11) 22180 FBgn0264562 FBgn0264562 FBtr0333339 Hr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_843 chr2L 12942976 12943089 + 36 NA Intergenic Intergenic 17421 FBgn0040506 FBgn0040506 FBtr0310556 ACXE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2738 chr2R 14103186 14103316 + 36 NA Intergenic Intergenic 7991 FBgn0050114 FBgn0050114 FBtr0086753 CG30114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2868 chr2R 16240956 16241015 + 36 NA TTS (FBgn0034507) protein_coding-TTS (FBgn0034507) 1573 FBgn0034507 FBgn0034507 FBtr0290122 CG11192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1820 chr2L 22557074 22557145 + 36 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 84627 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1590 chr2L 20936068 20936172 + 36 NA Intergenic Intergenic -2007 FBgn0032908 FBgn0032908 FBtr0306031 CG9270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_787 chr2L 12350047 12350144 + 36 NA intron (FBgn0262475, intron 1 of 9) protein_coding-intron (FBgn0262475, intron 1 of 9) 1978 FBgn0262475 FBgn0262475 FBtr0304864 bru-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1900 chr2LHet 188186 188241 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4508 chr3L 23848289 23848439 + 36 NA intron (FBgn0058470, intron 12 of 12) protein_coding-intron (FBgn0058470, intron 12 of 12) 27878 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6005 chr3R 22319322 22319411 + 36 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 27571 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6411 chr3R 26459812 26459866 + 36 NA Intergenic Intergenic -5089 FBgn0039792 FBgn0039792 FBtr0085672 CG2267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4805 chr3R 3406564 3406630 + 36 NA exon (FBgn0083963, exon 5 of 13) protein_coding-exon (FBgn0083963, exon 5 of 13) -31753 FBgn0015568 FBgn0015568 FBtr0081544 alpha-Est1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6439 chr3R 26776670 26776756 + 36 NA Intergenic Intergenic -8816 FBgn0039812 FBgn0039812 FBtr0085731 CG15548 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4081 chr3L 14126205 14126309 + 36 NA Intergenic Intergenic -1860 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4976 chr3R 6344423 6344484 + 36 NA intron (FBgn0001235, intron 10 of 12) protein_coding-intron (FBgn0001235, intron 9 of 11) -5675 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6098 chr3R 23321072 23321130 + 36 NA Intergenic Intergenic 6646 FBgn0262613 FBgn0262613 FBtr0305290 CG43139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5579 chr3R 14697377 14697433 + 36 NA Intergenic Intergenic -4025 FBgn0038654 FBgn0038654 FBtr0083695 CG14298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_385 chr2L 5712539 5712621 + 36 NA exon (FBgn0031730, exon 4 of 5) protein_coding-exon (FBgn0031730, exon 4 of 5) 621 FBgn0031730 FBgn0031730 FBtr0302950 CG7236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5049 chr3R 7198480 7198534 + 36 NA promoter-TSS (FBgn0004595) protein_coding-promoter-TSS (FBgn0004595) -19654 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4456 chr3L 22375463 22375532 + 36 NA intron (FBgn0004449, intron 1 of 11) protein_coding-intron (FBgn0004449, intron 1 of 8) 25466 FBgn0004449 FBgn0004449 FBtr0330159 Ten-m protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2159 chr2R 4756366 4756430 + 36 NA exon (FBgn0011286, exon 8 of 27) protein_coding-exon (FBgn0011286, exon 8 of 27) 8529 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_515 chr2L 8497978 8498060 + 36 NA intron (FBgn0032048, intron 2 of 3) protein_coding-intron (FBgn0032048, intron 2 of 4) -1712 FBgn0032049 FBgn0032049 FBtr0079701 Bace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3539 chr3L 3030778 3030832 + 36 NA Intergenic Intergenic -4373 FBgn0004372 FBgn0004372 FBtr0332086 aly protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5343 chr3R 11955524 11955614 + 36 NA intron (FBgn0003319, intron 1 of 10) protein_coding-intron (FBgn0003319, intron 1 of 10) 1118 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3603 chr3L 5326527 5326685 + 36 NA Intergenic Intergenic -8578 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_3991 chr3L 12678021 12678081 + 36 NA Intergenic Intergenic -8688 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1918 chr2LHet 344546 344619 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4000 chr3L 12755236 12755290 + 36 NA exon (FBgn0052113, exon 13 of 19) protein_coding-exon (FBgn0052113, exon 13 of 19) 7114 FBgn0052113 FBgn0052113 FBtr0273390 CG32113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4638 chr3R 1156007 1156071 + 36 NA intron (FBgn0013576, intron 1 of 14) protein_coding-intron (FBgn0013576, intron 1 of 14) 24430 FBgn0037312 FBgn0037312 FBtr0078807 CG11999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_325 chr2L 4726184 4726238 + 36 NA Intergenic Intergenic 8247 FBgn0031626 FBgn0031626 FBtr0077419 CG15631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4869 chr3R 4358490 4358544 + 36 NA Intergenic Intergenic -3918 FBgn0040531 FBgn0040531 FBtr0112769 CG11741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7227 chrX 17115200 17115254 + 36 NA promoter-TSS (FBgn0030830) protein_coding-promoter-TSS (FBgn0030830) -248 FBgn0030830 FBgn0030830 FBtr0114540 CG5172 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6296 chr3R 25203104 25203162 + 36 NA exon (FBgn0004369, exon 1 of 19) protein_coding-exon (FBgn0004369, exon 1 of 19) -57797 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5947 chr3R 21764274 21764343 + 36 NA intron (FBgn0039396, intron 2 of 6) protein_coding-intron (FBgn0039396, intron 2 of 6) 7185 FBgn0054024 FBgn0054024 FBtr0308933 CR34024 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2909 chr2R 16987848 16987905 + 36 NA exon (FBgn0085425, exon 4 of 4) protein_coding-exon (FBgn0085425, exon 4 of 4) -1559 FBgn0015721 FBgn0015721 FBtr0089599 king-tubby protein_coding Nup98-S2-pascual-garcia2017_R1_peak_541 chr2L 8629769 8629823 + 36 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 9768 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3737 chr3L 7549114 7549185 + 36 NA exon (FBgn0035797, exon 3 of 3) protein_coding-exon (FBgn0035797, exon 3 of 3) 3988 FBgn0035797 FBgn0035797 FBtr0290223 CG14837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_832 chr2L 12850640 12850704 + 36 NA Intergenic Intergenic -27885 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3320 chr2RHet 1991193 1991247 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3598 chr3L 4870114 4870236 + 36 NA exon (FBgn0035581, exon 16 of 52) protein_coding-exon (FBgn0035581, exon 16 of 52) 8871 FBgn0035581 FBgn0035581 FBtr0289983 CG17150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1462 chr2L 19691755 19691838 + 36 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 9172 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1479 chr2L 19823828 19823904 + 36 NA intron (FBgn0263873, intron 2 of 15) protein_coding-intron (FBgn0263873, intron 2 of 15) 7452 FBgn0043021 FBgn0043021 FBtr0081294 snRNA:U5:38ABb snRNA Nup98-S2-pascual-garcia2017_R1_peak_816 chr2L 12680778 12680832 + 36 NA exon (FBgn0004394, exon 4 of 5) protein_coding-exon (FBgn0004394, exon 4 of 5) 2199 FBgn0004394 FBgn0004394 FBtr0080393 pdm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4306 chr3L 17589631 17589685 + 36 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) 22767 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_449 chr2L 6887971 6888073 + 36 NA intron (FBgn0031866, intron 1 of 12) protein_coding-intron (FBgn0031866, intron 1 of 12) 13122 FBgn0031866 FBgn0031866 FBtr0079344 neuroligin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7023 chrX 2949786 2949840 + 36 NA intron (FBgn0028369, intron 6 of 10) protein_coding-intron (FBgn0028369, intron 6 of 12) 11702 FBgn0029649 FBgn0029649 FBtr0332494 CG4116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3367 chr2RHet 2310709 2310787 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5594 chr3R 14837304 14837358 + 36 NA exon (FBgn0026239, exon 3 of 5) protein_coding-exon (FBgn0026239, exon 3 of 5) 12413 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6861 chrUextra 160131 160202 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_965 chr2L 14536950 14537004 + 36 NA Intergenic Intergenic -6053 FBgn0011866 FBgn0011866 FBtr0080663 tRNA:G3:35Be tRNA Nup98-S2-pascual-garcia2017_R1_peak_2852 chr2R 16016625 16016679 + 36 NA Intergenic Intergenic -16986 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4676 chr3R 1703144 1703198 + 36 NA exon (FBgn0083949, exon 13 of 17) protein_coding-exon (FBgn0083949, exon 13 of 17) -16152 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6015 chr3R 22440644 22440700 + 36 NA Intergenic Intergenic -4173 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_678 chr2L 10559417 10559484 + 36 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -7840 FBgn0032268 FBgn0032268 FBtr0080098 CG6138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2607 chr2R 11853568 11853622 + 36 NA exon (FBgn0013988, exon 7 of 15) protein_coding-exon (FBgn0013988, exon 7 of 15) 11048 FBgn0034054 FBgn0034054 FBtr0087201 CG8366 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5948 chr3R 21779282 21779386 + 36 NA intron (FBgn0039396, intron 1 of 6) protein_coding-intron (FBgn0039396, intron 1 of 6) 2658 FBgn0039396 FBgn0039396 FBtr0304043 CcapR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4802 chr3R 3242507 3242589 + 36 NA Intergenic Intergenic -2172 FBgn0051544 FBgn0051544 FBtr0081532 CG31544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5488 chr3R 13605296 13605350 + 36 NA exon (FBgn0262562, exon 4 of 17) protein_coding-exon (FBgn0262562, exon 4 of 17) 14973 FBgn0262562 FBgn0262562 FBtr0305013 CG43102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4164 chr3L 15739408 15739570 + 36 NA Intergenic Intergenic -17959 FBgn0010105 FBgn0010105 FBtr0075579 comm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2314 chr2R 7362805 7362880 + 36 NA promoter-TSS (FBgn0001269) protein_coding-promoter-TSS (FBgn0001269) -368 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7002 chrX 1646758 1646812 + 36 NA intron (FBgn0025391, intron 1 of 5) protein_coding-intron (FBgn0025391, intron 1 of 5) -1731 FBgn0025391 FBgn0025391 FBtr0302028 Scgdelta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5655 chr3R 15635592 15635655 + 36 NA intron (FBgn0014135, intron 2 of 4) protein_coding-intron (FBgn0014135, intron 2 of 4) 7211 FBgn0051471 FBgn0051471 FBtr0083794 tRNA:CR31471 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2899 chr2R 16848544 16848598 + 36 NA promoter-TSS (FBgn0008636) protein_coding-promoter-TSS (FBgn0008636) -157 FBgn0008636 FBgn0008636 FBtr0071556 hbn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_371 chr2L 5477028 5477138 + 36 NA Intergenic Intergenic 15442 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6046 chr3R 22608574 22608667 + 36 NA TTS (FBgn0261860) protein_coding-TTS (FBgn0261860) 1310 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_347 chr2L 5160559 5160639 + 36 NA exon (FBgn0261836, exon 6 of 6) protein_coding-exon (FBgn0261836, exon 6 of 6) 8850 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1214 chr2L 16937835 16937898 + 36 NA Intergenic Intergenic 7508 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5160 chr3R 9012795 9012984 + 36 NA promoter-TSS (FBgn0038123) protein_coding-promoter-TSS (FBgn0038123) -657 FBgn0038123 FBgn0038123 FBtr0082783 CG8508 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6300 chr3R 25247575 25247636 + 36 NA intron (FBgn0004369, intron 5 of 18) protein_coding-intron (FBgn0004369, intron 5 of 18) -57815 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3550 chr3L 3264382 3264441 + 36 NA intron (FBgn0035427, intron 2 of 5) protein_coding-intron (FBgn0035427, intron 1 of 4) -4084 FBgn0085294 FBgn0085294 FBtr0331459 CG34265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4167 chr3L 15787032 15787120 + 36 NA Intergenic Intergenic -14346 FBgn0036531 FBgn0036531 FBtr0075502 CG6244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_963 chr2L 14527494 14527548 + 36 NA Intergenic Intergenic 2595 FBgn0053648 FBgn0053648 FBtr0091625 CG33648 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6074 chr3R 23139625 23139679 + 36 NA exon (FBgn0039510, exon 13 of 32) protein_coding-exon (FBgn0039510, exon 13 of 32) 8395 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6655 chr4 1021088 1021142 + 36 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 10764 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5233 chr3R 10314477 10314540 + 36 NA Intergenic Intergenic -7098 FBgn0086901 FBgn0086901 FBtr0112631 cv-c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5861 chr3R 19093846 19093958 + 36 NA promoter-TSS (FBgn0004882) protein_coding-promoter-TSS (FBgn0004882) 2130 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3327 chr2RHet 2074232 2074297 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3576 chr3L 4221509 4221563 + 36 NA TTS (FBgn0052252) ncRNA-TTS (FBgn0052252) 1198 FBgn0052252 FBgn0052252 FBtr0307363 CR32252 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4344 chr3L 18081292 18081391 + 36 NA promoter-TSS (FBgn0085282) protein_coding-promoter-TSS (FBgn0085282) -921 FBgn0085282 FBgn0085282 FBtr0112447 CG34253 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2580 chr2R 11376064 11376118 + 36 NA exon (FBgn0034022, exon 3 of 4) protein_coding-exon (FBgn0034022, exon 3 of 4) -5753 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2413 chr2R 8789367 8789421 + 36 NA Intergenic Intergenic -14108 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2384 chr2R 8167142 8167196 + 36 NA promoter-TSS (FBgn0261611) protein_coding-promoter-TSS (FBgn0261611) -11125 FBgn0261611 FBgn0261611 FBtr0332924 CG42700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3734 chr3L 7455352 7455425 + 36 NA Intergenic Intergenic -3221 FBgn0261537 FBgn0261537 FBtr0302559 CG42661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_280 chr2L 4297739 4297793 + 36 NA intron (FBgn0010473, intron 3 of 12) protein_coding-intron (FBgn0010473, intron 3 of 6) 14618 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_404 chr2L 5925060 5925163 + 36 NA promoter-TSS (FBgn0015381) protein_coding-promoter-TSS (FBgn0015381) -826 FBgn0015381 FBgn0015381 FBtr0079145 dsf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2585 chr2R 11488787 11488844 + 36 NA Intergenic Intergenic -12792 FBgn0260429 FBgn0260429 FBtr0304712 CG42524 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4621 chr3R 788504 788577 + 36 NA Intergenic Intergenic -1481 FBgn0250839 FBgn0250839 FBtr0305964 CG2016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6843 chrU 5859695 5859749 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3265 chr2RHet 1872645 1872703 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4471 chr3L 23344214 23344268 + 36 NA Intergenic Intergenic 11815 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5514 chr3R 13899561 13899615 + 36 NA Intergenic Intergenic -7255 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6158 chr3R 23909167 23909295 + 36 NA exon (FBgn0085391, exon 8 of 10) protein_coding-exon (FBgn0085391, exon 8 of 10) 56897 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7108 chrX 8556236 8556290 + 36 NA Intergenic Intergenic -11549 FBgn0004102 FBgn0004102 FBtr0331305 oc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3259 chr2RHet 1851553 1851612 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4150 chr3L 15397095 15397149 + 36 NA Intergenic Intergenic -3810 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5196 chr3R 9585980 9586097 + 36 NA exon (FBgn0085412, exon 12 of 13) protein_coding-exon (FBgn0085412, exon 12 of 13) -5459 FBgn0038179 FBgn0038179 FBtr0082825 CG9312 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5003 chr3R 6581036 6581090 + 36 NA TTS (FBgn0051272) protein_coding-TTS (FBgn0051272) 293 FBgn0037829 FBgn0037829 FBtr0082314 CG14691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3709 chr3L 7006205 7006267 + 36 NA promoter-TSS (FBgn0260660) protein_coding-promoter-TSS (FBgn0260660) 13658 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5922 chr3R 21254027 21254081 + 36 NA intron (FBgn0004509, intron 1 of 9) protein_coding-intron (FBgn0004509, intron 2 of 11) -27687 FBgn0051439 FBgn0051439 FBtr0084845 Muc96D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1606 chr2L 21206496 21206551 + 36 NA promoter-TSS (FBgn0026255) protein_coding-promoter-TSS (FBgn0026255) 3 FBgn0026255 FBgn0026255 FBtr0081476 clumsy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2335 chr2R 7513450 7513508 + 36 NA intron (FBgn0033638, intron 2 of 7) protein_coding-intron (FBgn0033638, intron 2 of 7) -6951 FBgn0086712 FBgn0086712 FBtr0088090 Egm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4121 chr3L 14863807 14863866 + 36 NA exon (FBgn0036454, exon 11 of 19) protein_coding-exon (FBgn0036454, exon 11 of 19) 23680 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6765 chrU 1256360 1256414 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6739 chrU 374585 374639 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_748 chr2L 11680793 11680851 + 36 NA Intergenic Intergenic -14034 FBgn0032372 FBgn0032372 FBtr0080254 CG4988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5386 chr3R 12449433 12449488 + 36 NA exon (FBgn0038452, exon 3 of 5) protein_coding-exon (FBgn0038452, exon 3 of 5) 979 FBgn0038452 FBgn0038452 FBtr0083357 CG14905 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3226 chr2RHet 1299704 1299781 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4498 chr3L 23748083 23748195 + 36 NA Intergenic Intergenic 17079 FBgn0040056 FBgn0040056 FBtr0333914 CG17698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5762 chr3R 16868839 16868903 + 36 NA promoter-TSS (FBgn0038847) protein_coding-promoter-TSS (FBgn0038847) -730 FBgn0013812 FBgn0013812 FBtr0273236 Dhc93AB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4236 chr3L 16764241 16764295 + 36 NA intron (FBgn0004108, intron 1 of 2) protein_coding-intron (FBgn0004108, intron 1 of 2) 5096 FBgn0004108 FBgn0004108 FBtr0075323 Nrt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_964 chr2L 14530857 14530916 + 36 NA promoter-TSS (FBgn0011866) tRNA-promoter-TSS (FBgn0011866) 38 FBgn0011866 FBgn0011866 FBtr0080663 tRNA:G3:35Be tRNA Nup98-S2-pascual-garcia2017_R1_peak_3018 chr2R 18940839 18940906 + 36 NA Intergenic Intergenic -4934 FBgn0050194 FBgn0050194 FBtr0300176 CG30194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1314 chr2L 17817034 17817162 + 36 NA intron (FBgn0262018, intron 3 of 14) protein_coding-intron (FBgn0262018, intron 2 of 13) -4426 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_730 chr2L 11402337 11402391 + 36 NA Intergenic Intergenic -10066 FBgn0263764 FBgn0263764 FBtr0333747 CG43681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5966 chr3R 21985240 21985301 + 36 NA Intergenic Intergenic -11301 FBgn0051323 FBgn0051323 FBtr0307339 CG31323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1114 chr2L 15651875 15651948 + 36 NA exon (FBgn0028863, exon 3 of 13) protein_coding-exon (FBgn0028863, exon 3 of 13) -9130 FBgn0028864 FBgn0028864 FBtr0080756 CG18477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_827 chr2L 12802956 12803047 + 36 NA Intergenic Intergenic 5339 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1161 chr2L 16216460 16216563 + 36 NA exon (FBgn0264392, exon 2 of 2) ncRNA-exon (FBgn0264392, exon 2 of 2) 533 FBgn0264392 FBgn0264392 FBtr0332359 CR43840 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7255 chrX 18922738 18922825 + 36 NA TTS (FBgn0264090) protein_coding-TTS (FBgn0264090) -21725 FBgn0085358 FBgn0085358 FBtr0112531 Diedel3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5484 chr3R 13568222 13568284 + 36 NA intron (FBgn0038541, intron 4 of 5) protein_coding-intron (FBgn0038541, intron 3 of 4) 5920 FBgn0038541 FBgn0038541 FBtr0083512 TyrRII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6822 chrU 3230742 3230808 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_719 chr2L 11250628 11250682 + 36 NA intron (FBgn0264442, intron 5 of 6) protein_coding-intron (FBgn0264442, intron 7 of 8) 15804 FBgn0264442 FBgn0264442 FBtr0332559 ab protein_coding Nup98-S2-pascual-garcia2017_R1_peak_138 chr2L 1623248 1623395 + 36 NA Intergenic Intergenic -9139 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4248 chr3L 16932637 16932724 + 36 NA promoter-TSS (FBgn0036679) protein_coding-promoter-TSS (FBgn0036679) -628 FBgn0036679 FBgn0036679 FBtr0273313 CG13022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3755 chr3L 8007265 8007328 + 36 NA intron (FBgn0011817, intron 3 of 8) protein_coding-intron (FBgn0011817, intron 3 of 9) 14422 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2012 chr2R 2076652 2076706 + 36 NA TTS (FBgn0011935) tRNA-TTS (FBgn0011935) 1028 FBgn0011935 FBgn0011935 FBtr0086004 tRNA:N5:42Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_4618 chr3R 762992 763047 + 36 NA exon (FBgn0085335, exon 2 of 2) protein_coding-exon (FBgn0085335, exon 2 of 2) 10376 FBgn0085335 FBgn0085335 FBtr0112502 CG34306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6722 chrU 232853 232935 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1773 chr2L 22227396 22227522 + 36 NA TTS (FBgn0042701) pseudogene-TTS (FBgn0042701) 1308 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6621 chr4 640510 640635 + 36 NA exon (FBgn0025936, exon 12 of 13) protein_coding-exon (FBgn0025936, exon 12 of 13) 6085 FBgn0039914 FBgn0039914 FBtr0089103 mav protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5190 chr3R 9455977 9456045 + 36 NA Intergenic Intergenic -1653 FBgn0038163 FBgn0038163 FBtr0309093 CG10841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3525 chr3L 2732497 2732551 + 36 NA intron (FBgn0052296, intron 1 of 4) protein_coding-intron (FBgn0052296, intron 1 of 4) 2156 FBgn0052296 FBgn0052296 FBtr0306332 Mrtf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2006 chr2R 2052376 2052480 + 36 NA promoter-TSS (FBgn0011888) tRNA-promoter-TSS (FBgn0011888) 25 FBgn0011888 FBgn0011888 FBtr0086013 tRNA:K2:42Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_3349 chr2RHet 2237219 2237273 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5606 chr3R 15071519 15071573 + 36 NA exon (FBgn0038693, exon 2 of 28) protein_coding-exon (FBgn0038693, exon 2 of 28) 305 FBgn0038693 FBgn0038693 FBtr0301694 unc79 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1898 chr2LHet 155141 155223 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3146 chr2RHet 101620 101706 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4742 chr3R 2627008 2627062 + 36 NA exon (FBgn0000439, exon 4 of 5) protein_coding-exon (FBgn0000439, exon 4 of 5) 8221 FBgn0262424 FBgn0262424 FBtr0304381 mir-10 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1715 chr2L 21993713 21993767 + 36 NA promoter-TSS (FBgn0032969) protein_coding-promoter-TSS (FBgn0032969) -807 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_532 chr2L 8605608 8605797 + 36 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -11213 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2683 chr2R 13129295 13129361 + 36 NA intron (FBgn0261642, intron 2 of 9) protein_coding-intron (FBgn0261642, intron 2 of 9) 4454 FBgn0034206 FBgn0034206 FBtr0086996 CG18469 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6731 chrU 254568 254677 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_88 chr2L 1252116 1252170 + 36 NA Intergenic Intergenic -4283 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_181 chr2L 2533983 2534037 + 36 NA Intergenic Intergenic -15973 FBgn0031430 FBgn0031430 FBtr0077781 CG3528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_76 chr2L 1108328 1108405 + 36 NA promoter-TSS (FBgn0031301) protein_coding-promoter-TSS (FBgn0031301) 7 FBgn0261938 FBgn0261938 FBtr0077989 mtRNApol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2036 chr2R 2798646 2798719 + 36 NA intron (FBgn0050158, intron 5 of 7) protein_coding-intron (FBgn0050158, intron 5 of 7) -12269 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2035 chr2R 2797474 2797529 + 36 NA exon (FBgn0050158, exon 4 of 8) protein_coding-exon (FBgn0050158, exon 4 of 8) -13450 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_418 chr2L 6284634 6284688 + 36 NA intron (FBgn0053531, intron 3 of 7) protein_coding-intron (FBgn0053531, intron 3 of 17) 13637 FBgn0261699 FBgn0261699 FBtr0333241 CR42735 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1633 chr2L 21588999 21589102 + 36 NA TTS (FBgn0260719) pseudogene-TTS (FBgn0260719) 305 FBgn0016919 FBgn0016919 FBtr0301173 nompB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5501 chr3R 13741609 13741663 + 36 NA intron (FBgn0053547, intron 1 of 24) protein_coding-intron (FBgn0053547, intron 1 of 26) 664 FBgn0053547 FBgn0053547 FBtr0305019 Rim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4119 chr3L 14845672 14845776 + 36 NA intron (FBgn0036454, intron 3 of 7) protein_coding-intron (FBgn0036454, intron 3 of 18) 41792 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2470 chr2R 9508895 9508949 + 36 NA Intergenic Intergenic -1671 FBgn0000633 FBgn0000633 FBtr0087625 fas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1151 chr2L 16105035 16105110 + 36 NA Intergenic Intergenic 10063 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_434 chr2L 6601138 6601228 + 36 NA promoter-TSS (FBgn0031835) protein_coding-promoter-TSS (FBgn0031835) -117 FBgn0031835 FBgn0031835 FBtr0089641 CG11319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1488 chr2L 19903604 19903672 + 36 NA intron (FBgn0263873, intron 2 of 13) protein_coding-intron (FBgn0263873, intron 4 of 15) 8173 FBgn0262543 FBgn0262543 FBtr0332244 CR43097 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3388 chr2RHet 2990251 2990319 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3851 chr3L 10137398 10137452 + 36 NA Intergenic Intergenic 7401 FBgn0086076 FBgn0086076 FBtr0114352 snoRNA:MeU2-A31 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5111 chr3R 8360186 8360240 + 36 NA intron (FBgn0250910, intron 2 of 7) protein_coding-intron (FBgn0250910, intron 2 of 9) 8303 FBgn0028374 FBgn0028374 FBtr0082639 hug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2979 chr2R 18233599 18233653 + 36 NA promoter-TSS (FBgn0034720) protein_coding-promoter-TSS (FBgn0034720) -2186 FBgn0034721 FBgn0034721 FBtr0071819 CG11298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3123 chr2R 20929175 20929229 + 36 NA exon (FBgn0001147, exon 4 of 5) protein_coding-exon (FBgn0001147, exon 4 of 5) 9299 FBgn0035092 FBgn0035092 FBtr0110861 Nplp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6187 chr3R 24121773 24121856 + 36 NA Intergenic Intergenic 1988 FBgn0039576 FBgn0039576 FBtr0085279 CG17856 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5128 chr3R 8623069 8623133 + 36 NA Intergenic Intergenic -19227 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1193 chr2L 16582897 16582986 + 36 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -23004 FBgn0051815 FBgn0051815 FBtr0080870 CG31815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6093 chr3R 23290125 23290202 + 36 NA exon (FBgn0039518, exon 1 of 2) protein_coding-exon (FBgn0039518, exon 1 of 2) 252 FBgn0039518 FBgn0039518 FBtr0085182 CG13978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2432 chr2R 9011552 9011606 + 36 NA exon (FBgn0033792, exon 6 of 11) protein_coding-exon (FBgn0033792, exon 6 of 11) 4980 FBgn0033793 FBgn0033793 FBtr0087780 CG3955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3579 chr3L 4310291 4310347 + 36 NA Intergenic Intergenic -3164 FBgn0052251 FBgn0052251 FBtr0073286 CG32251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5812 chr3R 17884959 17885032 + 36 NA intron (FBgn0264491, intron 2 of 8) protein_coding-intron (FBgn0264491, intron 2 of 8) 17081 FBgn0264491 FBgn0264491 FBtr0084178 how protein_coding Nup98-S2-pascual-garcia2017_R1_peak_170 chr2L 2280854 2280917 + 36 NA Intergenic Intergenic -1171 FBgn0264084 FBgn0264084 FBtr0330688 CR43753 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1627 chr2L 21386975 21387053 + 36 NA intron (FBgn0032946, intron 4 of 7) protein_coding-intron (FBgn0032946, intron 4 of 7) 7014 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2021 chr2R 2394873 2394945 + 36 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 2) 26191 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3623 chr3L 5838726 5838780 + 36 NA promoter-TSS (FBgn0003984) protein_coding-promoter-TSS (FBgn0003984) 11 FBgn0003984 FBgn0003984 FBtr0077082 vn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_96 chr2L 1331190 1331244 + 36 NA Intergenic Intergenic 2056 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3336 chr2RHet 2143521 2143575 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2886 chr2R 16635304 16635365 + 36 NA intron (FBgn0040726, intron 7 of 7) protein_coding-intron (FBgn0040726, intron 7 of 7) -3118 FBgn0085230 FBgn0085230 FBtr0112394 CG34201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6847 chrU 6290941 6291003 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5590 chr3R 14798088 14798142 + 36 NA exon (FBgn0261262, exon 15 of 19) protein_coding-exon (FBgn0261262, exon 15 of 19) 6416 FBgn0038665 FBgn0038665 FBtr0304691 CG12269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6685 chrU 65936 65994 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_52 chr2L 933651 933705 + 36 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 10885 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4544 chr3LHet 15908 15962 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5867 chr3R 19279346 19279400 + 36 NA intron (FBgn0039078, intron 1 of 3) protein_coding-intron (FBgn0039078, intron 1 of 3) -22177 FBgn0039078 FBgn0039078 FBtr0310575 CG4374 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_102 chr2L 1363223 1363305 + 36 NA Intergenic Intergenic -1532 FBgn0053126 FBgn0053126 FBtr0329947 NLaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2612 chr2R 11959714 11959770 + 36 NA Intergenic Intergenic 6582 FBgn0263334 FBgn0263334 FBtr0308762 CR43415 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1917 chr2LHet 299390 299485 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2179 chr2R 4955976 4956051 + 36 NA promoter-TSS (FBgn0011746) protein_coding-promoter-TSS (FBgn0011746) -593 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1540 chr2L 20502319 20502389 + 36 NA Intergenic Intergenic 7248 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2448 chr2R 9252648 9252702 + 36 NA Intergenic Intergenic -10702 FBgn0033828 FBgn0033828 FBtr0087721 CG17048 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6948 chrUextra 22840284 22840338 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3551 chr3L 3270986 3271048 + 36 NA promoter-TSS (FBgn0035428) protein_coding-promoter-TSS (FBgn0035428) -19 FBgn0035428 FBgn0035428 FBtr0073051 CG14960 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2195 chr2R 5261855 5261947 + 36 NA exon (FBgn0033405, exon 2 of 8) protein_coding-exon (FBgn0033405, exon 2 of 8) -11490 FBgn0040775 FBgn0040775 FBtr0088557 CG12158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2671 chr2R 12779377 12779434 + 36 NA intron (FBgn0025833, intron 2 of 5) protein_coding-intron (FBgn0025833, intron 2 of 5) 3395 FBgn0262307 FBgn0262307 FBtr0304461 mir-990 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_842 chr2L 12933477 12933555 + 36 NA Intergenic Intergenic 7905 FBgn0040506 FBgn0040506 FBtr0310556 ACXE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1343 chr2L 18074707 18074804 + 36 NA Intergenic Intergenic -3514 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4667 chr3R 1629965 1630029 + 36 NA intron (FBgn0263353, intron 1 of 3) protein_coding-intron (FBgn0263353, intron 1 of 3) 1947 FBgn0263353 FBgn0263353 FBtr0113195 CG11000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1866 chr2L 22714454 22714556 + 36 NA Intergenic Intergenic 21792 FBgn0262947 FBgn0262947 FBtr0306552 CG43266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1140 chr2L 16049120 16049174 + 36 NA promoter-TSS (FBgn0013433) protein_coding-promoter-TSS (FBgn0013433) -848 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6041 chr3R 22593200 22593278 + 36 NA Intergenic Intergenic 16691 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1975 chr2R 1333356 1333410 + 36 NA intron (FBgn0259247, intron 6 of 7) protein_coding-intron (FBgn0259247, intron 6 of 7) 29526 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5725 chr3R 16334305 16334374 + 36 NA exon (FBgn0038799, exon 4 of 6) protein_coding-exon (FBgn0038799, exon 4 of 6) 1730 FBgn0038799 FBgn0038799 FBtr0083889 CG4288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1246 chr2L 17167361 17167422 + 36 NA intron (FBgn0032627, intron 3 of 5) protein_coding-intron (FBgn0032627, intron 3 of 5) -4021 FBgn0083942 FBgn0083942 FBtr0110785 CG34106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1363 chr2L 18284347 18284401 + 36 NA TTS (FBgn0051787) protein_coding-TTS (FBgn0051787) 1310 FBgn0051787 FBgn0051787 FBtr0081055 CG31787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3784 chr3L 8580800 8580882 + 36 NA exon (FBgn0262508, exon 3 of 6) protein_coding-exon (FBgn0262508, exon 3 of 6) 8999 FBgn0262508 FBgn0262508 FBtr0304812 CG43078 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5816 chr3R 17962538 17962665 + 36 NA intron (FBgn0051163, intron 1 of 18) protein_coding-intron (FBgn0051163, intron 1 of 18) 3044 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2308 chr2R 7292703 7292820 + 36 NA promoter-TSS (FBgn0033633) protein_coding-promoter-TSS (FBgn0033633) -455 FBgn0033633 FBgn0033633 FBtr0088134 CG7759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_634 chr2L 9489120 9489181 + 36 NA Intergenic Intergenic 5646 FBgn0004868 FBgn0004868 FBtr0079862 Gdi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2593 chr2R 11554367 11554489 + 36 NA intron (FBgn0023441, intron 3 of 12) protein_coding-intron (FBgn0023441, intron 3 of 9) -1829 FBgn0023441 FBgn0023441 FBtr0087347 fus protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5267 chr3R 11212975 11213122 + 36 NA exon (FBgn0262483, exon 7 of 14) protein_coding-exon (FBgn0262483, exon 7 of 14) -4375 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1037 chr2L 14995889 14995943 + 36 NA intron (FBgn0086711, intron 1 of 5) protein_coding-intron (FBgn0086711, intron 1 of 7) 1643 FBgn0086711 FBgn0086711 FBtr0332521 mol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5953 chr3R 21804059 21804148 + 36 NA exon (FBgn0259146, exon 3 of 3) protein_coding-exon (FBgn0259146, exon 3 of 3) -4632 FBgn0015269 FBgn0015269 FBtr0084952 Nf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2151 chr2R 4678490 4678561 + 36 NA Intergenic Intergenic -1613 FBgn0033330 FBgn0033330 FBtr0088714 CG8746 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1236 chr2L 17081270 17081339 + 36 NA Intergenic Intergenic -4346 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5395 chr3R 12567945 12568006 + 36 NA exon (FBgn0020556, exon 3 of 3) ncRNA-exon (FBgn0020556, exon 3 of 3) 4133 FBgn0020556 FBgn0020556 FBtr0083344 bxd ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5235 chr3R 10328757 10328827 + 36 NA Intergenic Intergenic 8642 FBgn0038233 FBgn0038233 FBtr0082987 HtrA2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3730 chr3L 7387157 7387211 + 36 NA exon (FBgn0035777, exon 2 of 5) protein_coding-exon (FBgn0035777, exon 2 of 5) -2271 FBgn0052379 FBgn0052379 FBtr0273419 CG32379 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_330 chr2L 4805643 4805701 + 36 NA Intergenic Intergenic -3749 FBgn0031629 FBgn0031629 FBtr0332595 Clect27 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1890 chr2L 22931441 22931495 + 36 NA Intergenic Intergenic -12908 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7047 chrX 4320933 4321003 + 36 NA promoter-TSS (FBgn0000179) protein_coding-promoter-TSS (FBgn0000179) 14079 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4788 chr3R 3121406 3121461 + 36 NA exon (FBgn0259172, exon 3 of 8) protein_coding-exon (FBgn0259172, exon 3 of 8) -8881 FBgn0260713 FBgn0260713 FBtr0301214 CG42544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6597 chr4 132418 132474 + 36 NA exon (FBgn0085432, exon 12 of 12) protein_coding-exon (FBgn0085432, exon 12 of 12) 17632 FBgn0011747 FBgn0011747 FBtr0089173 Ank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3942 chr3L 11893005 11893061 + 36 NA exon (FBgn0263615, exon 2 of 2) ncRNA-exon (FBgn0263615, exon 2 of 2) 1328 FBgn0263615 FBgn0263615 FBtr0309979 CR43624 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3850 chr3L 10134889 10134945 + 36 NA Intergenic Intergenic 9909 FBgn0086076 FBgn0086076 FBtr0114352 snoRNA:MeU2-A31 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2575 chr2R 11304211 11304274 + 36 NA exon (FBgn0263980, exon 3 of 15) protein_coding-exon (FBgn0263980, exon 3 of 15) 7370 FBgn0050472 FBgn0050472 FBtr0332396 CG30472 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1777 chr2L 22264780 22264860 + 36 NA Intergenic Intergenic 14942 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3091 chr2R 20310637 20310691 + 36 NA TTS (FBgn0259729) protein_coding-TTS (FBgn0259729) 1961 FBgn0259729 FBgn0259729 FBtr0299995 CG42383 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1298 chr2L 17698121 17698188 + 36 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -6527 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3279 chr2RHet 1904169 1904263 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5063 chr3R 7515771 7515831 + 36 NA promoter-TSS (FBgn0037936) protein_coding-promoter-TSS (FBgn0037936) -56 FBgn0037936 FBgn0037936 FBtr0082437 CG6908 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1797 chr2L 22394218 22394397 + 36 NA Intergenic Intergenic 34018 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5184 chr3R 9422647 9422703 + 36 NA Intergenic Intergenic -4339 FBgn0038159 FBgn0038159 FBtr0082789 CG14369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6688 chrU 72801 72879 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3864 chr3L 10588502 10588571 + 36 NA Intergenic Intergenic 28140 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4021 chr3L 13111630 13111687 + 36 NA TTS (FBgn0010452) protein_coding-TTS (FBgn0010452) 4287 FBgn0010452 FBgn0010452 FBtr0330075 trn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_961 chr2L 14514153 14514207 + 36 NA Intergenic Intergenic -3911 FBgn0011862 FBgn0011862 FBtr0089613 tRNA:G3:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_446 chr2L 6841275 6841332 + 36 NA Intergenic Intergenic -11021 FBgn0017551 FBgn0017551 FBtr0079342 Rca1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4126 chr3L 14951838 14951901 + 36 NA Intergenic Intergenic -10575 FBgn0026320 FBgn0026320 FBtr0075620 Tom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5416 chr3R 12717995 12718107 + 36 NA promoter-TSS (FBgn0263595) ncRNA-promoter-TSS (FBgn0263595) -81 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_380 chr2L 5603082 5603233 + 36 NA exon (FBgn0031725, exon 12 of 12) protein_coding-exon (FBgn0031725, exon 12 of 12) 6324 FBgn0031724 FBgn0031724 FBtr0079109 CG18266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4584 chr3LHet 2447049 2447144 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4100 chr3L 14409839 14409893 + 36 NA exon (FBgn0087007, exon 5 of 9) protein_coding-exon (FBgn0087007, exon 5 of 9) 6140 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6153 chr3R 23851776 23851894 + 36 NA promoter-TSS (FBgn0085391) protein_coding-promoter-TSS (FBgn0085391) -499 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4845 chr3R 4014845 4014906 + 36 NA Intergenic Intergenic -7711 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6794 chrU 1977218 1977273 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2918 chr2R 17243390 17243444 + 36 NA exon (FBgn0000395, exon 7 of 7) protein_coding-exon (FBgn0000395, exon 7 of 7) -5068 FBgn0034624 FBgn0034624 FBtr0071611 CG17974 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5316 chr3R 11745379 11745441 + 36 NA Intergenic Intergenic -1210 FBgn0038385 FBgn0038385 FBtr0083201 CG4221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5929 chr3R 21627087 21627146 + 36 NA Intergenic Intergenic -3616 FBgn0264429 FBgn0264429 FBtr0332549 CR43847 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_244 chr2L 3672607 3672679 + 36 NA intron (FBgn0085369, intron 1 of 7) protein_coding-intron (FBgn0085369, intron 1 of 7) -2062 FBgn0261054 FBgn0261054 FBtr0301934 Sfp24Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5737 chr3R 16549806 16549860 + 36 NA Intergenic Intergenic -7520 FBgn0051205 FBgn0051205 FBtr0300451 CG31205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1319 chr2L 17853488 17853548 + 36 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 2 of 14) 21729 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3079 chr2R 20118301 20118356 + 36 NA Intergenic Intergenic -1017 FBgn0050419 FBgn0050419 FBtr0072275 CG30419 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1301 chr2L 17709454 17709542 + 36 NA exon (FBgn0015609, exon 10 of 22) protein_coding-exon (FBgn0015609, exon 10 of 22) 4817 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_924 chr2L 14296871 14296972 + 36 NA intron (FBgn0261563, intron 4 of 12) protein_coding-intron (FBgn0261563, intron 4 of 15) -1527 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2858 chr2R 16101735 16101789 + 36 NA Intergenic Intergenic -1638 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1180 chr2L 16437831 16437928 + 36 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -7401 FBgn0020416 FBgn0020416 FBtr0080860 Idgf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_155 chr2L 1952389 1952457 + 36 NA exon (FBgn0031375, exon 2 of 2) protein_coding-exon (FBgn0031375, exon 2 of 2) 2096 FBgn0031375 FBgn0031375 FBtr0330202 erm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5276 chr3R 11264867 11264936 + 36 NA promoter-TSS (FBgn0000047) protein_coding-promoter-TSS (FBgn0000047) -809 FBgn0000047 FBgn0000047 FBtr0083143 Act88F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_162 chr2L 2023844 2023947 + 36 NA promoter-TSS (FBgn0031384) protein_coding-promoter-TSS (FBgn0031384) -7797 FBgn0011860 FBgn0011860 FBtr0077821 tRNA:G3:22BCb tRNA Nup98-S2-pascual-garcia2017_R1_peak_1494 chr2L 20011297 20011351 + 36 NA intron (FBgn0264443, intron 1 of 5) protein_coding-intron (FBgn0264443, intron 1 of 5) 5958 FBgn0264443 FBgn0264443 FBtr0332566 CG43861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3643 chr3L 6099931 6099985 + 36 NA intron (FBgn0005658, intron 4 of 9) protein_coding-intron (FBgn0005658, intron 4 of 9) -4609 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6706 chrU 154170 154246 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5388 chr3R 12511914 12512007 + 36 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -30471 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1001 chr2L 14729875 14729929 + 36 NA promoter-TSS (FBgn0261571) protein_coding-promoter-TSS (FBgn0261571) 99 FBgn0261571 FBgn0261571 FBtr0302857 CG42685 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2634 chr2R 12285527 12285581 + 36 NA promoter-TSS (FBgn0264273) protein_coding-promoter-TSS (FBgn0264273) 11525 FBgn0264273 FBgn0264273 FBtr0100001 Sema-2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4474 chr3L 23392226 23392280 + 36 NA Intergenic Intergenic 59827 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2724 chr2R 13878847 13878917 + 36 NA intron (FBgn0034286, intron 1 of 6) protein_coding-intron (FBgn0034286, intron 1 of 6) 16488 FBgn0034286 FBgn0034286 FBtr0300215 dpr13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4624 chr3R 824578 824674 + 36 NA intron (FBgn0037292, intron 1 of 3) protein_coding-intron (FBgn0037292, intron 1 of 3) 12127 FBgn0037292 FBgn0037292 FBtr0301312 CG2022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4519 chr3L 23965764 23965819 + 36 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 13719 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7016 chrX 2480368 2480459 + 36 NA promoter-TSS (FBgn0040375) protein_coding-promoter-TSS (FBgn0040375) 403 FBgn0040066 FBgn0040066 FBtr0070438 wds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6212 chr3R 24378185 24378239 + 36 NA Intergenic Intergenic -7688 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1091 chr2L 15515452 15515506 + 36 NA Intergenic Intergenic -6959 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_358 chr2L 5398658 5398712 + 36 NA Intergenic Intergenic -5657 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3352 chr2RHet 2238800 2238854 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5165 chr3R 9117416 9117470 + 36 NA TTS (FBgn0038134) protein_coding-TTS (FBgn0038134) 1005 FBgn0038133 FBgn0038133 FBtr0082738 Osi22 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6124 chr3R 23607064 23607120 + 36 NA intron (FBgn0085382, intron 9 of 11) protein_coding-intron (FBgn0085382, intron 9 of 11) 44830 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1697 chr2L 21950145 21950237 + 36 NA Intergenic Intergenic 33830 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1417 chr2L 19103440 19103511 + 36 NA TTS (FBgn0032755) protein_coding-TTS (FBgn0032755) 1431 FBgn0032755 FBgn0032755 FBtr0081152 CG17344 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1325 chr2L 17903456 17903513 + 36 NA Intergenic Intergenic 9672 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1593 chr2L 20997251 20997305 + 36 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -28311 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2822 chr2R 15613691 15613745 + 36 NA promoter-TSS (FBgn0011850) tRNA-promoter-TSS (FBgn0011850) 0 FBgn0011850 FBgn0011850 FBtr0086448 tRNA:E4:56Fc tRNA Nup98-S2-pascual-garcia2017_R1_peak_2892 chr2R 16749174 16749265 + 36 NA Intergenic Intergenic -4387 FBgn0034554 FBgn0034554 FBtr0071514 CG15227 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_220 chr2L 3336007 3336061 + 36 NA exon (FBgn0020445, exon 8 of 9) protein_coding-exon (FBgn0020445, exon 8 of 9) 3220 FBgn0031523 FBgn0031523 FBtr0304701 CG15408 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6463 chr3R 26970283 26970341 + 36 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 10198 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6504 chr3R 27452792 27452891 + 36 NA intron (FBgn0039862, intron 1 of 3) protein_coding-intron (FBgn0039862, intron 1 of 3) 4983 FBgn0039862 FBgn0039862 FBtr0330107 kek6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1018 chr2L 14826341 14826423 + 36 NA Intergenic Intergenic 15594 FBgn0053309 FBgn0053309 FBtr0080674 CG33309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6750 chrU 1045032 1045104 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6507 chr3R 27476742 27476796 + 36 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) -18418 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1651 chr2L 21738121 21738177 + 36 NA Intergenic Intergenic 19317 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_397 chr2L 5823935 5823989 + 36 NA promoter-TSS (FBgn0085410) protein_coding-promoter-TSS (FBgn0085410) -832 FBgn0085410 FBgn0085410 FBtr0330222 TrissinR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2255 chr2R 6235365 6235421 + 36 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 4273 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4094 chr3L 14335598 14335652 + 36 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) 13179 FBgn0036419 FBgn0036419 FBtr0075744 CG13482 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_172 chr2L 2352101 2352155 + 36 NA intron (FBgn0031414, intron 7 of 13) protein_coding-intron (FBgn0031413, intron 1 of 5) 5228 FBgn0031413 FBgn0031413 FBtr0077799 CG9967 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_37 chr2L 775916 775970 + 36 NA promoter-TSS (FBgn0040725) protein_coding-promoter-TSS (FBgn0040725) -593 FBgn0040725 FBgn0040725 FBtr0078004 CG13946 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2743 chr2R 14143605 14143659 + 36 NA Intergenic Intergenic 21066 FBgn0003022 FBgn0003022 FBtr0086768 Ote protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2508 chr2R 10217698 10217789 + 36 NA intron (FBgn0085408, intron 7 of 9) protein_coding-intron (FBgn0085408, intron 7 of 9) -2157 FBgn0085408 FBgn0085408 FBtr0112616 Shroom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4743 chr3R 2655618 2655672 + 36 NA intron (FBgn0003339, intron 2 of 2) protein_coding-intron (FBgn0003339, intron 2 of 2) -6888 FBgn0011904 FBgn0011904 FBtr0081660 tRNA:K5:84ABa tRNA Nup98-S2-pascual-garcia2017_R1_peak_284 chr2L 4311014 4311068 + 36 NA intron (FBgn0010473, intron 9 of 12) protein_coding-intron (FBgn0010473, intron 9 of 9) -13532 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2291 chr2R 6888483 6888575 + 36 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -59323 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_970 chr2L 14559139 14559274 + 36 NA Intergenic Intergenic 4520 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6526 chr3R 27708679 27708733 + 36 NA intron (FBgn0011224, intron 5 of 14) protein_coding-intron (FBgn0011224, intron 4 of 13) 57140 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5723 chr3R 16323706 16323790 + 36 NA Intergenic Intergenic 3900 FBgn0038797 FBgn0038797 FBtr0083892 Dic2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4430 chr3L 21225267 21225325 + 36 NA intron (FBgn0004865, intron 4 of 6) protein_coding-intron (FBgn0004865, intron 3 of 5) 5587 FBgn0004865 FBgn0004865 FBtr0078307 Eip78C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_225 chr2L 3431007 3431126 + 36 NA Intergenic Intergenic -4424 FBgn0031530 FBgn0031530 FBtr0077592 pgant2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_64 chr2L 1021449 1021544 + 36 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) 5394 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3157 chr2RHet 173617 173671 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1869 chr2L 22853397 22853488 + 36 NA Intergenic Intergenic -10234 FBgn0058005 FBgn0058005 FBtr0308291 CG40005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6125 chr3R 23607222 23607276 + 36 NA exon (FBgn0085382, exon 9 of 12) protein_coding-exon (FBgn0085382, exon 9 of 12) 44987 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2209 chr2R 5506595 5506649 + 36 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) 2166 FBgn0262385 FBgn0262385 FBtr0304246 mir-307a pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3342 chr2RHet 2200286 2200355 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7025 chrX 3130523 3130577 + 36 NA exon (FBgn0040393, exon 1 of 1) protein_coding-exon (FBgn0040393, exon 1 of 1) 169 FBgn0040393 FBgn0040393 FBtr0070541 CG14265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6761 chrU 1209029 1209083 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2491 chr2R 9741844 9741917 + 36 NA promoter-TSS (FBgn0033879) protein_coding-promoter-TSS (FBgn0033879) -44 FBgn0033879 FBgn0033879 FBtr0087644 CG6543 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5176 chr3R 9269769 9269823 + 36 NA Intergenic Intergenic -4865 FBgn0261814 FBgn0261814 FBtr0303300 CR42756 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2652 chr2R 12445487 12445565 + 36 NA TTS (FBgn0034136) protein_coding-TTS (FBgn0034136) 5761 FBgn0034135 FBgn0034135 FBtr0087097 Syn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_558 chr2L 8745452 8745521 + 36 NA Intergenic Intergenic -4826 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4234 chr3L 16742295 16742349 + 36 NA Intergenic Intergenic -6267 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5580 chr3R 14720131 14720185 + 36 NA Intergenic Intergenic -3685 FBgn0038655 FBgn0038655 FBtr0083696 CG14297 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6736 chrU 295041 295095 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3613 chr3L 5666252 5666306 + 36 NA exon (FBgn0085447, exon 7 of 35) protein_coding-exon (FBgn0085447, exon 7 of 35) -10932 FBgn0035627 FBgn0035627 FBtr0077125 Sse protein_coding Nup98-S2-pascual-garcia2017_R1_peak_231 chr2L 3540187 3540266 + 36 NA intron (FBgn0024244, intron 1 of 2) protein_coding-intron (FBgn0024244, intron 1 of 2) 491 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3760 chr3L 8064453 8064520 + 36 NA exon (FBgn0262579, exon 2 of 12) protein_coding-exon (FBgn0262579, exon 2 of 12) 434 FBgn0262579 FBgn0262579 FBtr0304994 Ect4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6100 chr3R 23324746 23324863 + 36 NA Intergenic Intergenic 2943 FBgn0262613 FBgn0262613 FBtr0305290 CG43139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3406 chr3L 377411 377467 + 36 NA promoter-TSS (FBgn0262139) protein_coding-promoter-TSS (FBgn0262139) -123 FBgn0262139 FBgn0262139 FBtr0333902 trh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1629 chr2L 21394680 21394734 + 36 NA Intergenic Intergenic -9408 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3528 chr3L 2846706 2846809 + 36 NA intron (FBgn0263392, intron 5 of 10) protein_coding-intron (FBgn0263392, intron 4 of 9) 32401 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4287 chr3L 17437736 17437840 + 36 NA intron (FBgn0036725, intron 1 of 1) protein_coding-intron (FBgn0036725, intron 1 of 1) -1861 FBgn0036725 FBgn0036725 FBtr0333689 CG18265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6386 chr3R 25804996 25805056 + 36 NA Intergenic Intergenic -4148 FBgn0039728 FBgn0039728 FBtr0085545 CG7896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5156 chr3R 8897757 8897811 + 36 NA promoter-TSS (FBgn0004666) protein_coding-promoter-TSS (FBgn0004666) -14162 FBgn0262365 FBgn0262365 FBtr0304647 CG43063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5105 chr3R 8187162 8187222 + 36 NA intron (FBgn0038017, intron 2 of 2) protein_coding-intron (FBgn0038017, intron 2 of 2) -1446 FBgn0065094 FBgn0065094 FBtr0091921 snmRNA:419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2818 chr2R 15575206 15575272 + 36 NA exon (FBgn0034467, exon 1 of 7) protein_coding-exon (FBgn0034467, exon 1 of 7) 344 FBgn0034467 FBgn0034467 FBtr0086481 CG15128 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1355 chr2L 18164919 18165132 + 36 NA exon (FBgn0261804, exon 13 of 15) protein_coding-exon (FBgn0261804, exon 13 of 15) -6339 FBgn0032671 FBgn0032671 FBtr0081062 CG7200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3538 chr3L 3020623 3020680 + 36 NA Intergenic Intergenic -3395 FBgn0052487 FBgn0052487 FBtr0073007 CG32487 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5931 chr3R 21656495 21656636 + 36 NA promoter-TSS (FBgn0011669) protein_coding-promoter-TSS (FBgn0011669) 71 FBgn0011669 FBgn0011669 FBtr0084915 Mst57Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6684 chrU 43670 43724 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1969 chr2R 897069 897125 + 36 NA intron (FBgn0040849, intron 2 of 4) protein_coding-intron (FBgn0040849, intron 2 of 4) 59925 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6716 chrU 209002 209056 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4614 chr3R 708667 708806 + 36 NA Intergenic Intergenic -4481 FBgn0020280 FBgn0020280 FBtr0078852 laf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3720 chr3L 7204032 7204090 + 36 NA Intergenic Intergenic -21044 FBgn0263218 FBgn0263218 FBtr0299546 Dscam2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_726 chr2L 11351994 11352063 + 36 NA Intergenic Intergenic -6845 FBgn0000287 FBgn0000287 FBtr0080236 salr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_929 chr2L 14314242 14314310 + 36 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -14153 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_301 chr2L 4431661 4431727 + 36 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -2214 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5497 chr3R 13727251 13727311 + 36 NA intron (FBgn0053547, intron 7 of 26) protein_coding-intron (FBgn0053547, intron 7 of 26) -4905 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5550 chr3R 14333994 14334057 + 36 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 37283 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_179 chr2L 2530300 2530363 + 36 NA Intergenic Intergenic -12294 FBgn0031430 FBgn0031430 FBtr0077781 CG3528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_472 chr2L 7315028 7315092 + 36 NA exon (FBgn0004009, exon 5 of 5) protein_coding-exon (FBgn0004009, exon 5 of 5) 7899 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5341 chr3R 11954181 11954235 + 36 NA promoter-TSS (FBgn0003319) protein_coding-promoter-TSS (FBgn0003319) -243 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6131 chr3R 23635364 23635433 + 36 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -35413 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5588 chr3R 14797572 14797626 + 36 NA exon (FBgn0261262, exon 14 of 19) protein_coding-exon (FBgn0261262, exon 14 of 19) 6932 FBgn0038665 FBgn0038665 FBtr0304691 CG12269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1602 chr2L 21129016 21129104 + 36 NA exon (FBgn0040297, exon 19 of 20) protein_coding-exon (FBgn0040297, exon 19 of 20) 13287 FBgn0023388 FBgn0023388 FBtr0301276 Dap160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6121 chr3R 23583443 23583498 + 36 NA Intergenic Intergenic 21208 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6066 chr3R 23029987 23030042 + 36 NA Intergenic Intergenic -10298 FBgn0004197 FBgn0004197 FBtr0085128 Ser protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5534 chr3R 14133980 14134082 + 36 NA intron (FBgn0038603, intron 2 of 7) protein_coding-intron (FBgn0038603, intron 2 of 7) 2597 FBgn0038603 FBgn0038603 FBtr0083592 PKD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2848 chr2R 15921287 15921355 + 36 NA Intergenic Intergenic -28829 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3854 chr3L 10315204 10315295 + 36 NA Intergenic Intergenic 2303 FBgn0262381 FBgn0262381 FBtr0304227 mir-276b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2103 chr2R 3926841 3926914 + 36 NA intron (FBgn0025360, intron 3 of 3) protein_coding-intron (FBgn0025360, intron 3 of 3) 8088 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4687 chr3R 1961042 1961122 + 36 NA Intergenic Intergenic -7405 FBgn0263498 FBgn0263498 FBtr0309514 CR43487 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2040 chr2R 2834307 2834403 + 36 NA promoter-TSS (FBgn0011892) tRNA-promoter-TSS (FBgn0011892) 30 FBgn0011892 FBgn0011892 FBtr0086190 tRNA:K2:42Ea tRNA Nup98-S2-pascual-garcia2017_R1_peak_1025 chr2L 14930404 14930513 + 36 NA exon (FBgn0028887, exon 3 of 3) protein_coding-exon (FBgn0028887, exon 3 of 3) 5723 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4032 chr3L 13415908 13415966 + 36 NA promoter-TSS (FBgn0052121) protein_coding-promoter-TSS (FBgn0052121) -501 FBgn0052121 FBgn0052121 FBtr0113424 CG32121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5532 chr3R 14093580 14093634 + 36 NA promoter-TSS (FBgn0038592) protein_coding-promoter-TSS (FBgn0038592) 97 FBgn0038592 FBgn0038592 FBtr0083571 CG18599 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6749 chrU 1042666 1042740 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6203 chr3R 24242870 24242924 + 36 NA Intergenic Intergenic -1033 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6465 chr3R 26978367 26978426 + 36 NA intron (FBgn0013973, intron 8 of 16) protein_coding-intron (FBgn0013973, intron 8 of 16) 16429 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4731 chr3R 2547890 2547945 + 36 NA intron (FBgn0051481, intron 2 of 7) protein_coding-intron (FBgn0051481, intron 3 of 8) 18113 FBgn0004783 FBgn0004783 FBtr0081691 Ccp84Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3647 chr3L 6110142 6110203 + 36 NA intron (FBgn0005658, intron 4 of 6) protein_coding-intron (FBgn0005658, intron 7 of 9) 5605 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5085 chr3R 7978075 7978136 + 36 NA intron (FBgn0037993, intron 2 of 6) protein_coding-intron (FBgn0037993, intron 2 of 6) 6212 FBgn0037993 FBgn0037993 FBtr0082549 dpr15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6681 chrU 37854 37991 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6833 chrU 3896631 3896715 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6778 chrU 1591677 1591736 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4538 chr3L 24201774 24201859 + 36 NA intron (FBgn0011288, intron 4 of 7) protein_coding-intron (FBgn0011288, intron 4 of 7) -116151 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2882 chr2R 16580944 16581025 + 36 NA exon (FBgn0034545, exon 2 of 2) protein_coding-exon (FBgn0034545, exon 2 of 2) 609 FBgn0034545 FBgn0034545 FBtr0086237 CG13438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2753 chr2R 14350108 14350162 + 36 NA exon (FBgn0028496, exon 15 of 19) protein_coding-exon (FBgn0028496, exon 15 of 19) -8168 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4530 chr3L 24119241 24119320 + 36 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 51951 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4561 chr3LHet 1018937 1018999 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4634 chr3R 996780 996834 + 36 NA TTS (FBgn0037295) protein_coding-TTS (FBgn0037295) 5778 FBgn0037295 FBgn0037295 FBtr0110950 dpr16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2086 chr2R 3884765 3884819 + 36 NA exon (FBgn0027788, exon 2 of 3) protein_coding-exon (FBgn0027788, exon 2 of 3) 1286 FBgn0027788 FBgn0027788 FBtr0088869 Hey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7151 chrX 12468979 12469035 + 36 NA intron (FBgn0030400, intron 1 of 3) protein_coding-intron (FBgn0030400, intron 1 of 3) 8219 FBgn0030400 FBgn0030400 FBtr0273245 CG11138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_48 chr2L 910371 910428 + 36 NA Intergenic Intergenic -3687 FBgn0046113 FBgn0046113 FBtr0273244 GluRIIC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_991 chr2L 14635396 14635450 + 36 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 19154 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4952 chr3R 5886412 5886466 + 36 NA promoter-TSS (FBgn0053629) pseudogene-promoter-TSS (FBgn0053629) 420 FBgn0037783 FBgn0037783 FBtr0082176 Npc2c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5821 chr3R 18111247 18111301 + 36 NA exon (FBgn0051163, exon 11 of 19) protein_coding-exon (FBgn0051163, exon 11 of 19) -7374 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2206 chr2R 5465511 5465600 + 36 NA promoter-TSS (FBgn0085436) protein_coding-promoter-TSS (FBgn0085436) 957 FBgn0085436 FBgn0085436 FBtr0302122 Not1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1720 chr2L 22010635 22010704 + 36 NA Intergenic Intergenic -4562 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_476 chr2L 7409766 7409826 + 36 NA promoter-TSS (FBgn0031909) protein_coding-promoter-TSS (FBgn0031909) 13 FBgn0031909 FBgn0031909 FBtr0079467 CG5181 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4554 chr3LHet 812172 812226 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1789 chr2L 22343202 22343288 + 36 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) 2623 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4022 chr3L 13118432 13118486 + 36 NA Intergenic Intergenic -10910 FBgn0053262 FBgn0053262 FBtr0302393 CG33262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4078 chr3L 14115284 14115365 + 36 NA intron (FBgn0042630, intron 3 of 6) protein_coding-intron (FBgn0042630, intron 3 of 6) 9073 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1665 chr2L 21782732 21782857 + 36 NA exon (FBgn0032964, exon 1 of 1) protein_coding-exon (FBgn0032964, exon 1 of 1) 1271 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3786 chr3L 8604357 8604463 + 36 NA intron (FBgn0035914, intron 2 of 5) protein_coding-intron (FBgn0035914, intron 2 of 5) -5925 FBgn0035915 FBgn0035915 FBtr0076638 S-Lap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4077 chr3L 14112957 14113028 + 36 NA intron (FBgn0042630, intron 3 of 6) protein_coding-intron (FBgn0042630, intron 3 of 6) 11405 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4014 chr3L 13071358 13071438 + 36 NA Intergenic Intergenic 4354 FBgn0263661 FBgn0263661 FBtr0310106 CR43652 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2705 chr2R 13536612 13536666 + 36 NA exon (FBgn0050106, exon 6 of 8) protein_coding-exon (FBgn0050106, exon 6 of 8) 5162 FBgn0050106 FBgn0050106 FBtr0086893 CCHa1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_132 chr2L 1577699 1577753 + 36 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 9429 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3766 chr3L 8213914 8213968 + 36 NA Intergenic Intergenic -1300 FBgn0035859 FBgn0035859 FBtr0076700 CG13678 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1793 chr2L 22351164 22351380 + 36 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -3083 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2248 chr2R 6213785 6213895 + 36 NA intron (FBgn0261698, intron 22 of 25) protein_coding-intron (FBgn0261698, intron 25 of 28) -5835 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1115 chr2L 15652753 15652815 + 36 NA exon (FBgn0028863, exon 2 of 13) protein_coding-exon (FBgn0028863, exon 2 of 13) -8257 FBgn0028864 FBgn0028864 FBtr0080756 CG18477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2190 chr2R 5205691 5205745 + 36 NA exon (FBgn0033403, exon 3 of 4) protein_coding-exon (FBgn0033403, exon 3 of 4) -5111 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1870 chr2L 22856492 22856569 + 36 NA Intergenic Intergenic -13322 FBgn0058005 FBgn0058005 FBtr0308291 CG40005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5520 chr3R 13947435 13947516 + 36 NA promoter-TSS (FBgn0003499) protein_coding-promoter-TSS (FBgn0003499) 12760 FBgn0051518 FBgn0051518 FBtr0083545 tRNA:CR31518 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5524 chr3R 13983615 13983682 + 36 NA promoter-TSS (FBgn0038568) protein_coding-promoter-TSS (FBgn0038568) -775 FBgn0038568 FBgn0038568 FBtr0083547 CG14315 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5567 chr3R 14445837 14445891 + 36 NA intron (FBgn0038629, intron 2 of 7) protein_coding-intron (FBgn0038629, intron 2 of 8) 1173 FBgn0038629 FBgn0038629 FBtr0114497 CG14304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3651 chr3L 6155532 6155619 + 36 NA promoter-TSS (FBgn0035687) protein_coding-promoter-TSS (FBgn0035687) -682 FBgn0035687 FBgn0035687 FBtr0076997 CG13296 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3796 chr3L 8742115 8742172 + 36 NA TTS (FBgn0040828) protein_coding-TTS (FBgn0040828) 683 FBgn0040828 FBgn0040828 FBtr0076592 CG13306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3821 chr3L 9151108 9151162 + 36 NA exon (FBgn0004244, exon 6 of 9) protein_coding-exon (FBgn0004244, exon 6 of 9) 13381 FBgn0263556 FBgn0263556 FBtr0309689 mir-4940 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1549 chr2L 20539585 20539650 + 36 NA Intergenic Intergenic -22807 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1527 chr2L 20387316 20387407 + 36 NA exon (FBgn0032857, exon 2 of 2) protein_coding-exon (FBgn0032857, exon 2 of 2) -5006 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3046 chr2R 19538998 19539055 + 36 NA exon (FBgn0004795, exon 8 of 12) protein_coding-exon (FBgn0004795, exon 8 of 12) -6068 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3916 chr3L 11362196 11362265 + 36 NA Intergenic Intergenic -4245 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1326 chr2L 17918892 17918951 + 36 NA exon (FBgn0262963, exon 2 of 2) ncRNA-exon (FBgn0262963, exon 2 of 2) 210 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4729 chr3R 2534703 2534818 + 36 NA intron (FBgn0051481, intron 7 of 7) protein_coding-intron (FBgn0051481, intron 8 of 8) 4956 FBgn0004783 FBgn0004783 FBtr0081691 Ccp84Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_871 chr2L 13476388 13476468 + 36 NA exon (FBgn0263354, exon 4 of 9) protein_coding-exon (FBgn0263354, exon 4 of 9) 14654 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_954 chr2L 14463543 14463597 + 36 NA Intergenic Intergenic -12648 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_357 chr2L 5391729 5391789 + 36 NA Intergenic Intergenic -10685 FBgn0262097 FBgn0262097 FBtr0310549 CG42850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3325 chr2RHet 2070800 2070867 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4523 chr3L 24052692 24052747 + 36 NA Intergenic Intergenic -14610 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_505 chr2L 8333804 8333863 + 36 NA TTS (FBgn0032022) protein_coding-TTS (FBgn0032022) -4454 FBgn0032023 FBgn0032023 FBtr0079604 CG14274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5827 chr3R 18165851 18165936 + 36 NA exon (FBgn0038944, exon 1 of 2) protein_coding-exon (FBgn0038944, exon 1 of 2) 136 FBgn0038944 FBgn0038944 FBtr0084241 CG5388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5214 chr3R 9826298 9826363 + 36 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 25351 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2276 chr2R 6566935 6567006 + 36 NA intron (FBgn0024836, intron 1 of 5) protein_coding-intron (FBgn0024836, intron 1 of 5) 6120 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_560 chr2L 8751375 8751430 + 36 NA promoter-TSS (FBgn0032065) protein_coding-promoter-TSS (FBgn0032065) -903 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3262 chr2RHet 1861641 1861742 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4105 chr3L 14476871 14476925 + 36 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) -34027 FBgn0036426 FBgn0036426 FBtr0290282 CG9592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3524 chr3L 2731448 2731502 + 36 NA intron (FBgn0052296, intron 1 of 4) protein_coding-intron (FBgn0052296, intron 1 of 4) 3205 FBgn0052296 FBgn0052296 FBtr0306332 Mrtf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4160 chr3L 15619344 15619432 + 36 NA intron (FBgn0259236, intron 1 of 1) protein_coding-intron (FBgn0259236, intron 1 of 1) 6292 FBgn0259236 FBgn0259236 FBtr0299851 comm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_73 chr2L 1092206 1092279 + 36 NA intron (FBgn0031299, intron 1 of 7) protein_coding-intron (FBgn0031299, intron 2 of 8) 10262 FBgn0031299 FBgn0031299 FBtr0332571 CG4629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5491 chr3R 13682428 13682493 + 36 NA intron (FBgn0261649, intron 5 of 9) protein_coding-intron (FBgn0261649, intron 5 of 9) 45194 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6785 chrU 1923488 1923542 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_781 chr2L 12277774 12277902 + 36 NA intron (FBgn0000114, intron 2 of 8) protein_coding-intron (FBgn0000114, intron 3 of 11) -61010 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4670 chr3R 1634699 1634753 + 36 NA TTS (FBgn0263353) protein_coding-TTS (FBgn0263353) -4818 FBgn0261561 FBgn0261561 FBtr0302726 CG42675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2405 chr2R 8688324 8688456 + 35 NA exon (FBgn0003326, exon 4 of 4) protein_coding-exon (FBgn0003326, exon 4 of 4) -5792 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2791 chr2R 15015311 15015391 + 35 NA promoter-TSS (FBgn0034417) protein_coding-promoter-TSS (FBgn0034417) -627 FBgn0034417 FBgn0034417 FBtr0100129 CG15117 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4882 chr3R 4470225 4470279 + 35 NA exon (FBgn0037601, exon 4 of 7) protein_coding-exon (FBgn0037601, exon 4 of 7) 927 FBgn0037601 FBgn0037601 FBtr0081893 Cyp313b1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2524 chr2R 10512204 10512259 + 35 NA TTS (FBgn0082930) snoRNA-TTS (FBgn0082930) 473 FBgn0082919 FBgn0082919 FBtr0113511 snoRNA:Or-CD4 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5666 chr3R 15757882 15757977 + 35 NA exon (FBgn0021776, exon 1 of 1) protein_coding-exon (FBgn0021776, exon 1 of 1) 2913 FBgn0021776 FBgn0021776 FBtr0083848 mira protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3002 chr2R 18764842 18764896 + 35 NA exon (FBgn0034789, exon 9 of 14) protein_coding-exon (FBgn0034789, exon 9 of 14) 2575 FBgn0034789 FBgn0034789 FBtr0304923 PIP5K59B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5344 chr3R 11965073 11965127 + 35 NA intron (FBgn0003319, intron 2 of 10) protein_coding-intron (FBgn0003319, intron 2 of 10) 7477 FBgn0038400 FBgn0038400 FBtr0083281 CG5903 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5541 chr3R 14223098 14223176 + 35 NA promoter-TSS (FBgn0028670) protein_coding-promoter-TSS (FBgn0028670) -487 FBgn0028670 FBgn0028670 FBtr0083657 Vha100-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1078 chr2L 15424632 15424744 + 35 NA exon (FBgn0001983, exon 2 of 2) protein_coding-exon (FBgn0001983, exon 2 of 2) 897 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1415 chr2L 19089197 19089251 + 35 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -10196 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1742 chr2L 22075312 22075443 + 35 NA Intergenic Intergenic 4224 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_591 chr2L 8856573 8856627 + 35 NA Intergenic Intergenic -6176 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5736 chr3R 16546438 16546492 + 35 NA Intergenic Intergenic -6202 FBgn0024944 FBgn0024944 FBtr0330712 Oamb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1148 chr2L 16090020 16090114 + 35 NA Intergenic Intergenic -4942 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_676 chr2L 10346187 10346241 + 35 NA exon (FBgn0032225, exon 5 of 8) protein_coding-exon (FBgn0032225, exon 5 of 8) 1772 FBgn0032225 FBgn0032225 FBtr0079999 CG5022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_274 chr2L 4233182 4233236 + 35 NA Intergenic Intergenic 5567 FBgn0003941 FBgn0003941 FBtr0077470 RpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3512 chr3L 2241789 2241843 + 35 NA exon (FBgn0040507, exon 8 of 12) protein_coding-exon (FBgn0040507, exon 8 of 12) -2662 FBgn0052301 FBgn0052301 FBtr0332663 CG32301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5258 chr3R 10903785 10903866 + 35 NA promoter-TSS (FBgn0038282) protein_coding-promoter-TSS (FBgn0038282) -898 FBgn0038282 FBgn0038282 FBtr0089376 dpr9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5508 chr3R 13873252 13873306 + 35 NA exon (FBgn0010389, exon 2 of 2) protein_coding-exon (FBgn0010389, exon 2 of 2) 1804 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3100 chr2R 20481876 20481949 + 35 NA intron (FBgn0020521, intron 5 of 7) protein_coding-intron (FBgn0020521, intron 6 of 8) -3606 FBgn0035031 FBgn0035031 FBtr0072314 CG13587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6375 chr3R 25664792 25664851 + 35 NA Intergenic Intergenic -2558 FBgn0039709 FBgn0039709 FBtr0085488 Cad99C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2301 chr2R 7180671 7180729 + 35 NA promoter-TSS (FBgn0015582) protein_coding-promoter-TSS (FBgn0015582) -24 FBgn0015582 FBgn0015582 FBtr0088176 dare protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2399 chr2R 8584705 8584781 + 35 NA Intergenic Intergenic -2843 FBgn0033770 FBgn0033770 FBtr0113076 wuc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_250 chr2L 3813458 3813512 + 35 NA promoter-TSS (FBgn0031573) protein_coding-promoter-TSS (FBgn0031573) -78 FBgn0031573 FBgn0031573 FBtr0077515 CG3407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4246 chr3L 16918750 16918812 + 35 NA exon (FBgn0036677, exon 2 of 3) protein_coding-exon (FBgn0036677, exon 2 of 3) 1753 FBgn0036677 FBgn0036677 FBtr0075307 CG13023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5745 chr3R 16649930 16650016 + 35 NA promoter-TSS (FBgn0038830) protein_coding-promoter-TSS (FBgn0038830) -22 FBgn0038830 FBgn0038830 FBtr0083992 CG17272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3857 chr3L 10377999 10378084 + 35 NA Intergenic Intergenic 19660 FBgn0262439 FBgn0262439 FBtr0304433 mir-276a pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6057 chr3R 22856306 22856360 + 35 NA intron (FBgn0004842, intron 3 of 7) protein_coding-intron (FBgn0004842, intron 3 of 7) -4502 FBgn0039476 FBgn0039476 FBtr0085149 CG6271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2702 chr2R 13492227 13492319 + 35 NA promoter-TSS (FBgn0050231) tRNA-promoter-TSS (FBgn0050231) -3 FBgn0050231 FBgn0050231 FBtr0086835 tRNA:CR30231 tRNA Nup98-S2-pascual-garcia2017_R1_peak_695 chr2L 10774082 10774140 + 35 NA exon (FBgn0051869, exon 7 of 7) protein_coding-exon (FBgn0051869, exon 7 of 7) 3243 FBgn0032299 FBgn0032299 FBtr0080136 CG17127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_455 chr2L 7065840 7065894 + 35 NA promoter-TSS (FBgn0031886) protein_coding-promoter-TSS (FBgn0031886) -30 FBgn0031886 FBgn0031886 FBtr0079424 Nuf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5323 chr3R 11810494 11810553 + 35 NA Intergenic Intergenic -1400 FBgn0003507 FBgn0003507 FBtr0083216 srp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2169 chr2R 4896279 4896333 + 35 NA exon (FBgn0033362, exon 3 of 6) protein_coding-exon (FBgn0033362, exon 3 of 6) -2214 FBgn0085379 FBgn0085379 FBtr0112560 CG34350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2728 chr2R 13932162 13932241 + 35 NA promoter-TSS (FBgn0034290) protein_coding-promoter-TSS (FBgn0034290) 364 FBgn0034291 FBgn0034291 FBtr0086812 CG5770 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2288 chr2R 6849395 6849449 + 35 NA Intergenic Intergenic -20216 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1897 chr2LHet 154341 154419 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5625 chr3R 15352820 15352877 + 35 NA exon (FBgn0260003, exon 2 of 15) protein_coding-exon (FBgn0260003, exon 2 of 15) -36011 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6851 chrU 6559510 6559588 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5759 chr3R 16819112 16819283 + 35 NA exon (FBgn0013995, exon 2 of 9) protein_coding-exon (FBgn0013995, exon 2 of 9) -5539 FBgn0263400 FBgn0263400 FBtr0309177 CG43446 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3756 chr3L 8021682 8021744 + 35 NA promoter-TSS (FBgn0052370) tRNA-promoter-TSS (FBgn0052370) 5 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5799 chr3R 17544202 17544323 + 35 NA exon (FBgn0051176, exon 1 of 3) protein_coding-exon (FBgn0051176, exon 1 of 3) 1118 FBgn0051176 FBgn0051176 FBtr0084114 CG31176 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5381 chr3R 12390877 12390933 + 35 NA exon (FBgn0259244, exon 10 of 17) protein_coding-exon (FBgn0259244, exon 10 of 17) -6332 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9 chr2L 230835 230889 + 35 NA exon (FBgn0086902, exon 7 of 18) protein_coding-exon (FBgn0086902, exon 7 of 18) 1391 FBgn0263465 FBgn0263465 FBtr0309764 snoRNA:kis-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6514 chr3R 27571697 27571755 + 35 NA promoter-TSS (FBgn0022349) protein_coding-promoter-TSS (FBgn0022349) -20 FBgn0000150 FBgn0000150 FBtr0085864 awd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1463 chr2L 19693145 19693199 + 34 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 7796 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5332 chr3R 11904902 11904980 + 34 NA exon (FBgn0052855, exon 1 of 1) protein_coding-exon (FBgn0052855, exon 1 of 1) 1779 FBgn0052855 FBgn0052855 FBtr0083234 CG32855 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6423 chr3R 26698825 26698879 + 34 NA promoter-TSS (FBgn0039806) protein_coding-promoter-TSS (FBgn0039806) -850 FBgn0039806 FBgn0039806 FBtr0085719 CG15545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7144 chrX 11348367 11348470 + 34 NA promoter-TSS (FBgn0030301) protein_coding-promoter-TSS (FBgn0030301) -47 FBgn0262740 FBgn0262740 FBtr0300732 CG11727 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4425 chr3L 20991569 20991623 + 34 NA exon (FBgn0003415, exon 10 of 13) protein_coding-exon (FBgn0003415, exon 10 of 13) 6823 FBgn0037042 FBgn0037042 FBtr0078286 CG12984 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_553 chr2L 8666033 8666124 + 34 NA exon (FBgn0011259, exon 22 of 22) protein_coding-exon (FBgn0011259, exon 22 of 22) -7074 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5669 chr3R 15786775 15786855 + 34 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) -12420 FBgn0051213 FBgn0051213 FBtr0083824 CG31213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5628 chr3R 15407136 15407196 + 34 NA intron (FBgn0260003, intron 1 of 10) protein_coding-intron (FBgn0260003, intron 26 of 34) -4752 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1010 chr2L 14754078 14754174 + 34 NA Intergenic Intergenic -6641 FBgn0028870 FBgn0028870 FBtr0080670 CG4691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4646 chr3R 1236538 1236614 + 34 NA promoter-TSS (FBgn0037324) protein_coding-promoter-TSS (FBgn0037324) 1552 FBgn0037324 FBgn0037324 FBtr0078794 Orco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2596 chr2R 11620835 11621026 + 34 NA intron (FBgn0050089, intron 2 of 6) protein_coding-intron (FBgn0050089, intron 2 of 6) 6027 FBgn0050089 FBgn0050089 FBtr0087285 CG30089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_533 chr2L 8607586 8607666 + 34 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -12402 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3855 chr3L 10318291 10318452 + 34 NA Intergenic Intergenic 5425 FBgn0262381 FBgn0262381 FBtr0304227 mir-276b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4180 chr3L 16010731 16010785 + 34 NA exon (FBgn0264601, exon 1 of 1) protein_coding-exon (FBgn0264601, exon 1 of 1) 659 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1721 chr2L 22011257 22011371 + 34 NA Intergenic Intergenic -3917 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1450 chr2L 19513943 19513997 + 34 NA TTS (FBgn0032797) protein_coding-TTS (FBgn0032797) 3231 FBgn0032797 FBgn0032797 FBtr0299519 CG10186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_661 chr2L 10003787 10003841 + 34 NA promoter-TSS (FBgn0043456) protein_coding-promoter-TSS (FBgn0043456) -11 FBgn0043456 FBgn0043456 FBtr0303902 CG4747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6869 chrUextra 198693 198771 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6970 chrUextra 28583670 28583724 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7130 chrX 9756623 9756681 + 34 NA Intergenic Intergenic -2599 FBgn0019929 FBgn0019929 FBtr0071387 Ser7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7212 chrX 16043160 16043313 + 34 NA promoter-TSS (FBgn0042650) protein_coding-promoter-TSS (FBgn0042650) -24871 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_525 chr2L 8564771 8564841 + 34 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -6082 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6490 chr3R 27275568 27275622 + 34 NA intron (FBgn0261988, intron 3 of 12) protein_coding-intron (FBgn0261988, intron 3 of 12) 9996 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7093 chrX 7498800 7498922 + 34 NA Intergenic Intergenic -4320 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1205 chr2L 16867404 16867471 + 34 NA Intergenic Intergenic -2050 FBgn0051781 FBgn0051781 FBtr0308928 CR31781 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5542 chr3R 14225365 14225449 + 34 NA promoter-TSS (FBgn0028670) protein_coding-promoter-TSS (FBgn0028670) -48 FBgn0051232 FBgn0051232 FBtr0083629 koko protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4194 chr3L 16070315 16070395 + 34 NA exon (FBgn0005536, exon 5 of 7) protein_coding-exon (FBgn0005536, exon 5 of 7) -5296 FBgn0053258 FBgn0053258 FBtr0301030 CG33258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_874 chr2L 13498238 13498296 + 34 NA exon (FBgn0263354, exon 5 of 5) protein_coding-exon (FBgn0263354, exon 5 of 5) -29574 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1599 chr2L 21078058 21078150 + 34 NA exon (FBgn0032911, exon 4 of 9) protein_coding-exon (FBgn0032911, exon 4 of 9) 2699 FBgn0032911 FBgn0032911 FBtr0329988 tadr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6764 chrU 1251209 1251295 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1952 chr2R 828007 828091 + 34 NA Intergenic Intergenic -9123 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1913 chr2LHet 279395 279449 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_926 chr2L 14308653 14308736 + 34 NA exon (FBgn0261563, exon 2 of 14) protein_coding-exon (FBgn0261563, exon 2 of 14) -13300 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1882 chr2L 22907853 22907907 + 34 NA exon (FBgn0250907, exon 4 of 9) protein_coding-exon (FBgn0250907, exon 4 of 9) 10680 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2817 chr2R 15568535 15568589 + 34 NA exon (FBgn0040730, exon 1 of 1) protein_coding-exon (FBgn0040730, exon 1 of 1) 316 FBgn0040730 FBgn0040730 FBtr0086482 CG15127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5702 chr3R 16161369 16161423 + 34 NA Intergenic Intergenic -3593 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6868 chrUextra 198240 198321 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6459 chr3R 26945683 26945741 + 34 NA Intergenic Intergenic 3527 FBgn0261395 FBgn0261395 FBtr0085738 Prosalpha3T protein_coding Nup98-S2-pascual-garcia2017_R1_peak_776 chr2L 12176881 12176946 + 34 NA exon (FBgn0032422, exon 2 of 3) protein_coding-exon (FBgn0032422, exon 2 of 3) 839 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3332 chr2RHet 2139087 2139175 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3815 chr3L 9059113 9059167 + 34 NA promoter-TSS (FBgn0000116) protein_coding-promoter-TSS (FBgn0000116) 6691 FBgn0035959 FBgn0035959 FBtr0331549 CG4911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_750 chr2L 11726147 11726335 + 34 NA Intergenic Intergenic -12711 FBgn0032373 FBgn0032373 FBtr0080255 Vha100-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6602 chr4 190612 190682 + 34 NA exon (FBgn0053978, exon 4 of 4) protein_coding-exon (FBgn0053978, exon 4 of 4) 5119 FBgn0053978 FBgn0053978 FBtr0310436 CG33978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3360 chr2RHet 2263960 2264014 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3273 chr2RHet 1892234 1892376 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3205 chr2RHet 753978 754032 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5661 chr3R 15716399 15716472 + 34 NA promoter-TSS (FBgn0038744) protein_coding-promoter-TSS (FBgn0038744) -135 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_18 chr2L 531712 531794 + 34 NA intron (FBgn0003963, intron 3 of 8) protein_coding-intron (FBgn0003963, intron 2 of 7) 10827 FBgn0010602 FBgn0010602 FBtr0310029 lwr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3065 chr2R 19760485 19760539 + 34 NA intron (FBgn0011236, intron 1 of 2) protein_coding-intron (FBgn0011236, intron 1 of 2) 2716 FBgn0011236 FBgn0011236 FBtr0072129 ken protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4983 chr3R 6398103 6398166 + 34 NA intron (FBgn0001235, intron 5 of 12) protein_coding-intron (FBgn0001235, intron 5 of 11) 33258 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4966 chr3R 6092946 6093011 + 34 NA intron (FBgn0262617, intron 1 of 13) protein_coding-intron (FBgn0262617, intron 1 of 11) 5144 FBgn0040078 FBgn0040078 FBtr0082226 pont protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5328 chr3R 11892698 11892752 + 34 NA exon (FBgn0038397, exon 2 of 12) protein_coding-exon (FBgn0038397, exon 2 of 12) 509 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1702 chr2L 21958682 21958748 + 34 NA Intergenic Intergenic 34218 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3640 chr3L 6068599 6068653 + 34 NA promoter-TSS (FBgn0035675) protein_coding-promoter-TSS (FBgn0035675) -10 FBgn0035675 FBgn0035675 FBtr0332059 CG6610 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2383 chr2R 8163012 8163109 + 34 NA TTS (FBgn0000253) protein_coding-TTS (FBgn0000253) 10995 FBgn0000253 FBgn0000253 FBtr0088002 Cam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1186 chr2L 16501326 16501394 + 34 NA promoter-TSS (FBgn0032586) protein_coding-promoter-TSS (FBgn0032586) 9820 FBgn0032586 FBgn0032586 FBtr0333486 Tpr2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1948 chr2R 820253 820354 + 34 NA Intergenic Intergenic -16869 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_931 chr2L 14319914 14320066 + 34 NA exon (FBgn0261563, exon 5 of 16) protein_coding-exon (FBgn0261563, exon 5 of 16) -8439 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6850 chrU 6555963 6556049 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1843 chr2L 22653743 22653800 + 34 NA Intergenic Intergenic -4690 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1460 chr2L 19683423 19683492 + 34 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 17511 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1168 chr2L 16340259 16340313 + 34 NA promoter-TSS (FBgn0259151) protein_coding-promoter-TSS (FBgn0259151) 2038 FBgn0259151 FBgn0259151 FBtr0299599 CG42266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3777 chr3L 8388978 8389035 + 34 NA promoter-TSS (FBgn0035888) protein_coding-promoter-TSS (FBgn0035888) -94 FBgn0035888 FBgn0035888 FBtr0307378 CG7120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_595 chr2L 8863768 8863941 + 34 NA promoter-TSS (FBgn0052987) protein_coding-promoter-TSS (FBgn0052987) 43 FBgn0052987 FBgn0052987 FBtr0079735 CG32987 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_642 chr2L 9634072 9634126 + 34 NA promoter-TSS (FBgn0032136) protein_coding-promoter-TSS (FBgn0032136) -102 FBgn0032136 FBgn0032136 FBtr0303874 CG15828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6623 chr4 671285 671406 + 34 NA exon (FBgn0051992, exon 10 of 10) protein_coding-exon (FBgn0051992, exon 10 of 10) -4163 FBgn0039916 FBgn0039916 FBtr0110907 CG9935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2512 chr2R 10313820 10313899 + 34 NA TTS (FBgn0013725) protein_coding-TTS (FBgn0013725) 5981 FBgn0013725 FBgn0013725 FBtr0087516 phyl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6757 chrU 1091074 1091130 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5860 chr3R 19089679 19089737 + 34 NA TTS (FBgn0004882) protein_coding-TTS (FBgn0004882) 5106 FBgn0039068 FBgn0039068 FBtr0307596 CG13827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3793 chr3L 8732301 8732370 + 34 NA promoter-TSS (FBgn0003149) protein_coding-promoter-TSS (FBgn0003149) -328 FBgn0003149 FBgn0003149 FBtr0306639 Prm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4101 chr3L 14420435 14420511 + 34 NA promoter-TSS (FBgn0087007) protein_coding-promoter-TSS (FBgn0087007) 16747 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4597 chr3R 418511 418712 + 34 NA Intergenic Intergenic -14245 FBgn0052945 FBgn0052945 FBtr0078896 CG32945 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2948 chr2R 17713493 17713554 + 34 NA exon (FBgn0034662, exon 4 of 6) protein_coding-exon (FBgn0034662, exon 4 of 6) 5330 FBgn0034662 FBgn0034662 FBtr0302446 CG13492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_806 chr2L 12651242 12651296 + 34 NA Intergenic Intergenic -4913 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4039 chr3L 13534923 13534977 + 33 NA exon (FBgn0264001, exon 8 of 13) protein_coding-exon (FBgn0264001, exon 8 of 13) -22245 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_947 chr2L 14441960 14442062 + 33 NA Intergenic Intergenic 8911 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3428 chr3L 622679 622780 + 33 NA promoter-TSS (FBgn0263042) protein_coding-promoter-TSS (FBgn0263042) -413 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3606 chr3L 5339471 5339534 + 33 NA exon (FBgn0016031, exon 3 of 5) protein_coding-exon (FBgn0016031, exon 3 of 5) 4318 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_5000 chr3R 6526854 6526921 + 33 NA exon (FBgn0020385, exon 5 of 6) protein_coding-exon (FBgn0020385, exon 5 of 6) 3910 FBgn0051391 FBgn0051391 FBtr0082321 CG31391 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2638 chr2R 12315336 12315416 + 33 NA exon (FBgn0264273, exon 11 of 14) protein_coding-exon (FBgn0264273, exon 11 of 14) -4373 FBgn0034126 FBgn0034126 FBtr0087157 CG4398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1731 chr2L 22053269 22053346 + 33 NA TTS (FBgn0085202) protein_coding-TTS (FBgn0085202) 938 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2790 chr2R 15005775 15005829 + 33 NA exon (FBgn0004168, exon 9 of 11) protein_coding-exon (FBgn0004168, exon 9 of 11) 8922 FBgn0034417 FBgn0034417 FBtr0100129 CG15117 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_653 chr2L 9861919 9861977 + 33 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 13659 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6489 chr3R 27272467 27272521 + 33 NA intron (FBgn0261988, intron 3 of 12) protein_coding-intron (FBgn0261988, intron 3 of 12) 13097 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3192 chr2RHet 606021 606075 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1756 chr2L 22158572 22158664 + 33 NA exon (FBgn0261802, exon 8 of 8) protein_coding-exon (FBgn0261802, exon 8 of 8) 6864 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1867 chr2L 22744838 22744898 + 33 NA exon (FBgn0041004, exon 6 of 6) protein_coding-exon (FBgn0041004, exon 6 of 6) 7916 FBgn0041004 FBgn0041004 FBtr0306550 CG17715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3396 chr2RHet 3238493 3238594 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3368 chr2RHet 2313980 2314034 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3691 chr3L 6936575 6936646 + 33 NA intron (FBgn0035719, intron 1 of 6) protein_coding-intron (FBgn0035719, intron 1 of 6) 654 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1022 chr2L 14912116 14912178 + 33 NA exon (FBgn0259213, exon 19 of 20) protein_coding-exon (FBgn0259213, exon 19 of 20) -12588 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6473 chr3R 27039070 27039147 + 33 NA promoter-TSS (FBgn0039828) protein_coding-promoter-TSS (FBgn0039828) -36 FBgn0061476 FBgn0061476 FBtr0085777 zwilch protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3274 chr2RHet 1894112 1894190 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1743 chr2L 22075925 22076013 + 33 NA Intergenic Intergenic -3703 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5634 chr3R 15439716 15439776 + 33 NA exon (FBgn0038719, exon 2 of 5) protein_coding-exon (FBgn0038719, exon 2 of 5) 643 FBgn0038719 FBgn0038719 FBtr0083780 CG16727 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6527 chr3R 27709397 27709451 + 33 NA intron (FBgn0011224, intron 5 of 14) protein_coding-intron (FBgn0011224, intron 4 of 13) 57858 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_579 chr2L 8813633 8813705 + 33 NA Intergenic Intergenic 4269 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4196 chr3L 16122664 16122726 + 33 NA promoter-TSS (FBgn0011016) protein_coding-promoter-TSS (FBgn0011016) -22 FBgn0011016 FBgn0011016 FBtr0075453 SsRbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3361 chr2RHet 2264286 2264348 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6647 chr4 997547 997635 + 33 NA exon (FBgn0083990, exon 2 of 2) ncRNA-exon (FBgn0083990, exon 2 of 2) 1797 FBgn0083990 FBgn0083990 FBtr0111046 sphinx ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2569 chr2R 11172433 11172492 + 33 NA exon (FBgn0083959, exon 2 of 25) protein_coding-exon (FBgn0083959, exon 2 of 25) 7924 FBgn0083959 FBgn0083959 FBtr0110831 trpm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5806 chr3R 17654985 17655068 + 33 NA Intergenic Intergenic -3199 FBgn0041229 FBgn0041229 FBtr0084133 Gr93a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6008 chr3R 22324799 22324898 + 33 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 33053 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4908 chr3R 5116664 5116754 + 33 NA Intergenic Intergenic 23955 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6677 chrU 28446 28551 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6416 chr3R 26591385 26591532 + 33 NA promoter-TSS (FBgn0004606) protein_coding-promoter-TSS (FBgn0004606) -190 FBgn0004606 FBgn0004606 FBtr0085702 zfh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4303 chr3L 17585630 17585693 + 33 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -26399 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6251 chr3R 24606151 24606214 + 33 NA Intergenic Intergenic -9157 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2083 chr2R 3793067 3793121 + 33 NA exon (FBgn0050377, exon 4 of 5) protein_coding-exon (FBgn0050377, exon 4 of 5) 10874 FBgn0033232 FBgn0033232 FBtr0088888 CG12159 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6344 chr3R 25523779 25523878 + 33 NA Intergenic Intergenic 5515 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1775 chr2L 22261842 22261948 + 33 NA Intergenic Intergenic 12017 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2122 chr2R 4256843 4256897 + 33 NA exon (FBgn0033286, exon 1 of 1) protein_coding-exon (FBgn0033286, exon 1 of 1) 611 FBgn0033286 FBgn0033286 FBtr0088766 CG2127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6950 chrUextra 23503161 23503216 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6340 chr3R 25518210 25518287 + 33 NA promoter-TSS (FBgn0039683) protein_coding-promoter-TSS (FBgn0039683) -65 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1684 chr2L 21866553 21866657 + 33 NA Intergenic Intergenic -27622 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6239 chr3R 24581960 24582020 + 33 NA TTS (FBgn0039598) protein_coding-TTS (FBgn0039598) 711 FBgn0039597 FBgn0039597 FBtr0085314 CG9997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3848 chr3L 10087572 10087669 + 33 NA exon (FBgn0052054, exon 1 of 3) protein_coding-exon (FBgn0052054, exon 1 of 3) 218 FBgn0052054 FBgn0052054 FBtr0076314 CG32054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6891 chrUextra 814465 814586 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6237 chr3R 24579658 24579793 + 33 NA Intergenic Intergenic -2412 FBgn0039596 FBgn0039596 FBtr0085315 CG10000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1805 chr2L 22484270 22484486 + 33 NA Intergenic Intergenic 11896 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1728 chr2L 22035581 22035723 + 33 NA Intergenic Intergenic -2208 FBgn0084001 FBgn0084001 FBtr0332199 CG41434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4369 chr3L 18741754 18741814 + 33 NA promoter-TSS (FBgn0036813) protein_coding-promoter-TSS (FBgn0036813) -3 FBgn0036813 FBgn0036813 FBtr0075055 Aut1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6380 chr3R 25737576 25737656 + 33 NA exon (FBgn0051036, exon 7 of 9) protein_coding-exon (FBgn0051036, exon 7 of 9) 2452 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7236 chrX 18133474 18133551 + 33 NA Intergenic Intergenic 3805 FBgn0030904 FBgn0030904 FBtr0300182 upd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6379 chr3R 25728065 25728120 + 33 NA TTS (FBgn0039718) protein_coding-TTS (FBgn0039718) 1431 FBgn0039718 FBgn0039718 FBtr0085515 CG15517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5172 chr3R 9232507 9232570 + 33 NA exon (FBgn0038151, exon 2 of 3) protein_coding-exon (FBgn0038151, exon 2 of 3) 151 FBgn0038151 FBgn0038151 FBtr0302576 yellow-e2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1006 chr2L 14743530 14743594 + 33 NA promoter-TSS (FBgn0261567) protein_coding-promoter-TSS (FBgn0261567) 309 FBgn0085195 FBgn0085195 FBtr0301737 CG34166 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6831 chrU 3550196 3550250 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1809 chr2L 22525654 22525711 + 33 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 53200 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1668 chr2L 21816552 21816625 + 33 NA Intergenic Intergenic -12005 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7099 chrX 8035858 8035939 + 33 NA TTS (FBgn0030006) protein_coding-TTS (FBgn0030006) 403 FBgn0025800 FBgn0025800 FBtr0071192 Smox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2930 chr2R 17446916 17446970 + 33 NA TTS (FBgn0003731) protein_coding-TTS (FBgn0003731) 11869 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5170 chr3R 9196936 9196990 + 33 NA TTS (FBgn0038142) protein_coding-TTS (FBgn0038142) 663 FBgn0023495 FBgn0023495 FBtr0082771 Lip3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_154 chr2L 1949091 1949204 + 33 NA Intergenic Intergenic -2419 FBgn0053673 FBgn0053673 FBtr0307516 CG33673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5635 chr3R 15443231 15443292 + 33 NA exon (FBgn0038720, exon 6 of 7) protein_coding-exon (FBgn0038720, exon 6 of 7) 3599 FBgn0038720 FBgn0038720 FBtr0083810 CG6231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1164 chr2L 16232189 16232265 + 33 NA exon (FBgn0261999, exon 1 of 11) protein_coding-exon (FBgn0261999, exon 1 of 11) 752 FBgn0261999 FBgn0261999 FBtr0303797 CG42817 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3625 chr3L 5913994 5914150 + 33 NA intron (FBgn0035649, intron 1 of 5) protein_coding-intron (FBgn0035649, intron 1 of 5) 344 FBgn0035649 FBgn0035649 FBtr0077077 CG10483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1670 chr2L 21828125 21828179 + 33 NA promoter-TSS (FBgn0003866) protein_coding-promoter-TSS (FBgn0003866) -441 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6846 chrU 6110941 6110996 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6951 chrUextra 23632647 23632705 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_608 chr2L 8915713 8915819 + 33 NA exon (FBgn0085427, exon 2 of 11) protein_coding-exon (FBgn0085427, exon 2 of 11) 16962 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6190 chr3R 24171157 24171231 + 32 NA TTS (FBgn0039581) protein_coding-TTS (FBgn0039581) 5134 FBgn0039581 FBgn0039581 FBtr0300346 Moca-cyp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_479 chr2L 7576507 7576572 + 32 NA promoter-TSS (FBgn0085403) protein_coding-promoter-TSS (FBgn0085403) 2020 FBgn0031923 FBgn0031923 FBtr0079521 CG13791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5506 chr3R 13852656 13852786 + 32 NA Intergenic Intergenic 3292 FBgn0038565 FBgn0038565 FBtr0083540 CG7794 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6267 chr3R 24819519 24819585 + 32 NA exon (FBgn0039620, exon 8 of 10) protein_coding-exon (FBgn0039620, exon 8 of 10) 15002 FBgn0263579 FBgn0263579 FBtr0309743 mir-4947 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2926 chr2R 17409748 17409810 + 32 NA promoter-TSS (FBgn0003731) protein_coding-promoter-TSS (FBgn0003731) -426 FBgn0050289 FBgn0050289 FBtr0071697 CG30289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3477 chr3L 1524666 1524720 + 32 NA exon (FBgn0035227, exon 17 of 22) protein_coding-exon (FBgn0035227, exon 17 of 22) 6566 FBgn0053971 FBgn0053971 FBtr0100014 Ir62a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_610 chr2L 8921929 8922035 + 32 NA intron (FBgn0085427, intron 2 of 10) protein_coding-intron (FBgn0085427, intron 2 of 10) -12081 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2299 chr2R 7176913 7176975 + 32 NA TTS (FBgn0033610) protein_coding-TTS (FBgn0033610) 309 FBgn0033609 FBgn0033609 FBtr0088178 fbl6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5841 chr3R 18571294 18571354 + 32 NA promoter-TSS (FBgn0039019) protein_coding-promoter-TSS (FBgn0039019) -26 FBgn0039019 FBgn0039019 FBtr0084309 HP1c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6257 chr3R 24615228 24615296 + 32 NA promoter-TSS (FBgn0039599) protein_coding-promoter-TSS (FBgn0039599) -77 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2104 chr2R 3943368 3943444 + 32 NA exon (FBgn0033252, exon 3 of 5) protein_coding-exon (FBgn0033252, exon 3 of 5) 2650 FBgn0033252 FBgn0033252 FBtr0088828 CG12769 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3133 chr2R 21140534 21140599 + 32 NA promoter-TSS (FBgn0050428) protein_coding-promoter-TSS (FBgn0050428) -271 FBgn0050428 FBgn0050428 FBtr0072451 CG30428 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6236 chr3R 24576736 24576796 + 32 NA exon (FBgn0039596, exon 3 of 7) protein_coding-exon (FBgn0039596, exon 3 of 7) 547 FBgn0039596 FBgn0039596 FBtr0085315 CG10000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5259 chr3R 10946842 10946896 + 32 NA intron (FBgn0261859, intron 1 of 9) protein_coding-intron (FBgn0261859, intron 1 of 9) 9645 FBgn0262315 FBgn0262315 FBtr0304477 mir-2493 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2545 chr2R 10753019 10753073 + 32 NA exon (FBgn0022063, exon 7 of 12) protein_coding-exon (FBgn0022063, exon 7 of 12) -4796 FBgn0053505 FBgn0053505 FBtr0091445 U3-55K protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3096 chr2R 20466843 20466897 + 32 NA exon (FBgn0069913, exon 1 of 2) protein_coding-exon (FBgn0069913, exon 1 of 2) 434 FBgn0069913 FBgn0069913 FBtr0301624 CG4681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_935 chr2L 14334097 14334151 + 32 NA promoter-TSS (FBgn0028916) protein_coding-promoter-TSS (FBgn0028916) -36 FBgn0028916 FBgn0028916 FBtr0080624 CG33090 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5664 chr3R 15752446 15752500 + 32 NA exon (FBgn0038753, exon 4 of 4) protein_coding-exon (FBgn0038753, exon 4 of 4) -1380 FBgn0038752 FBgn0038752 FBtr0083850 CG4462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2377 chr2R 8061809 8061863 + 32 NA promoter-TSS (FBgn0010621) protein_coding-promoter-TSS (FBgn0010621) -765 FBgn0010621 FBgn0010621 FBtr0087988 Cct5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4186 chr3L 16015173 16015389 + 32 NA promoter-TSS (FBgn0264600) protein_coding-promoter-TSS (FBgn0264600) -675 FBgn0264600 FBgn0264600 FBtr0333620 CG43949 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2954 chr2R 17857228 17857288 + 32 NA intron (FBgn0085398, intron 7 of 9) protein_coding-intron (FBgn0085398, intron 7 of 9) 1527 FBgn0054029 FBgn0054029 FBtr0100084 CG34029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5222 chr3R 9934305 9934383 + 32 NA promoter-TSS (FBgn0038203) protein_coding-promoter-TSS (FBgn0038203) -301 FBgn0038202 FBgn0038202 FBtr0330081 CG12402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2995 chr2R 18621133 18621196 + 32 NA exon (FBgn0028371, exon 2 of 16) protein_coding-exon (FBgn0028371, exon 2 of 16) 6800 FBgn0028371 FBgn0028371 FBtr0302117 jbug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4250 chr3L 17003253 17003351 + 32 NA intron (FBgn0036684, intron 1 of 6) protein_coding-intron (FBgn0036684, intron 1 of 6) 5849 FBgn0036685 FBgn0036685 FBtr0332121 CG6664 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1875 chr2L 22892897 22892981 + 32 NA exon (FBgn0250907, exon 9 of 9) protein_coding-exon (FBgn0250907, exon 9 of 9) 18405 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11 chr2L 277271 277336 + 32 NA promoter-TSS (FBgn0003444) protein_coding-promoter-TSS (FBgn0003444) 68 FBgn0086855 FBgn0086855 FBtr0330649 CG17078 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2003 chr2R 2039402 2039474 + 32 NA TTS (FBgn0011938) tRNA-TTS (FBgn0011938) 743 FBgn0011938 FBgn0011938 FBtr0086016 tRNA:N5:42Ah tRNA Nup98-S2-pascual-garcia2017_R1_peak_2688 chr2R 13232413 13232470 + 32 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -37634 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_580 chr2L 8815505 8815626 + 31 NA Intergenic Intergenic 6165 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7123 chrX 9479650 9479725 + 31 NA promoter-TSS (FBgn0001186) protein_coding-promoter-TSS (FBgn0001186) -236 FBgn0001186 FBgn0001186 FBtr0071362 Hex-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_657 chr2L 9888057 9888114 + 31 NA promoter-TSS (FBgn0029174) protein_coding-promoter-TSS (FBgn0029174) -13 FBgn0029174 FBgn0029174 FBtr0079872 FKBP59 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_942 chr2L 14387867 14387939 + 31 NA Intergenic Intergenic -6733 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7061 chrX 5639687 5639761 + 31 NA intron (FBgn0261383, intron 1 of 2) protein_coding-intron (FBgn0261383, intron 1 of 1) 1563 FBgn0261383 FBgn0261383 FBtr0070842 IntS6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2471 chr2R 9510569 9510624 + 31 NA promoter-TSS (FBgn0000633) protein_coding-promoter-TSS (FBgn0000633) 3 FBgn0000633 FBgn0000633 FBtr0087625 fas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3083 chr2R 20201711 20201776 + 31 NA Intergenic Intergenic 8338 FBgn0003888 FBgn0003888 FBtr0072270 betaTub60D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3033 chr2R 19270918 19270972 + 31 NA promoter-TSS (FBgn0040660) protein_coding-promoter-TSS (FBgn0040660) -93 FBgn0040660 FBgn0040660 FBtr0072035 CG13551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1847 chr2L 22685790 22685861 + 31 NA Intergenic Intergenic 5183 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5526 chr3R 14000318 14000383 + 31 NA exon (FBgn0042693, exon 3 of 8) protein_coding-exon (FBgn0042693, exon 3 of 8) 6187 FBgn0042693 FBgn0042693 FBtr0083555 PP2A-B' protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3442 chr3L 769512 769595 + 31 NA promoter-TSS (FBgn0052480) tRNA-promoter-TSS (FBgn0052480) 50 FBgn0052480 FBgn0052480 FBtr0072579 tRNA:CR32480 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2227 chr2R 5796781 5796858 + 31 NA exon (FBgn0000715, exon 2 of 2) protein_coding-exon (FBgn0000715, exon 2 of 2) -1579 FBgn0033465 FBgn0033465 FBtr0308338 CG12140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_920 chr2L 14290210 14290294 + 31 NA promoter-TSS (FBgn0263648) ncRNA-promoter-TSS (FBgn0263648) -949 FBgn0263648 FBgn0263648 FBtr0310012 CR43639 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5347 chr3R 12006700 12006785 + 31 NA promoter-TSS (FBgn0038405) protein_coding-promoter-TSS (FBgn0038405) -2 FBgn0038405 FBgn0038405 FBtr0100110 CG8927 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6283 chr3R 25113232 25113335 + 31 NA Intergenic Intergenic 9668 FBgn0039659 FBgn0039659 FBtr0085439 CG14506 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4721 chr3R 2483558 2483612 + 31 NA promoter-TSS (FBgn0262801) protein_coding-promoter-TSS (FBgn0262801) -19 FBgn0262801 FBgn0262801 FBtr0081687 twr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6245 chr3R 24601402 24601480 + 31 NA Intergenic Intergenic -13898 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3780 chr3L 8442923 8442986 + 30 NA promoter-TSS (FBgn0010825) protein_coding-promoter-TSS (FBgn0010825) -68 FBgn0010825 FBgn0010825 FBtr0076618 Gug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6235 chr3R 24571530 24571584 + 30 NA Intergenic Intergenic -1072 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6511 chr3R 27539189 27539244 + 30 NA promoter-TSS (FBgn0003870) protein_coding-promoter-TSS (FBgn0003870) 4219 FBgn0054046 FBgn0054046 FBtr0308935 CR34046 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3414 chr3L 611565 611651 + 30 NA Intergenic Intergenic 5038 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2336 chr2R 7518599 7518653 + 30 NA intron (FBgn0033638, intron 1 of 7) protein_coding-intron (FBgn0033638, intron 1 of 7) 9792 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2932 chr2R 17451916 17451985 + 30 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 11590 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5583 chr3R 14754806 14754864 + 30 NA promoter-TSS (FBgn0038662) protein_coding-promoter-TSS (FBgn0038662) -83 FBgn0261262 FBgn0261262 FBtr0304686 CG42613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5368 chr3R 12257548 12257752 + 30 NA promoter-TSS (FBgn0051282) tRNA-promoter-TSS (FBgn0051282) -12 FBgn0051282 FBgn0051282 FBtr0083285 tRNA:CR31282 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7222 chrX 16677955 16678034 + 30 NA promoter-TSS (FBgn0030786) protein_coding-promoter-TSS (FBgn0030786) 7 FBgn0030786 FBgn0030786 FBtr0074330 mRpL22 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_549 chr2L 8656447 8656501 + 30 NA exon (FBgn0011259, exon 12 of 22) protein_coding-exon (FBgn0011259, exon 12 of 22) -16678 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_119 chr2L 1476628 1476703 + 30 NA Intergenic Intergenic -15630 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_354 chr2L 5331051 5331113 + 30 NA TTS (FBgn0031701) protein_coding-TTS (FBgn0031701) 1225 FBgn0031701 FBgn0031701 FBtr0307036 TotM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4591 chr3R 46677 46739 + 30 NA promoter-TSS (FBgn0037218) protein_coding-promoter-TSS (FBgn0037218) -11 FBgn0037218 FBgn0037218 FBtr0078966 aux protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2735 chr2R 14072762 14072888 + 30 NA exon (FBgn0053958, exon 12 of 13) protein_coding-exon (FBgn0053958, exon 12 of 13) -1230 FBgn0034315 FBgn0034315 FBtr0086771 CG5721 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_520 chr2L 8541729 8541807 + 30 NA promoter-TSS (FBgn0051603) tRNA-promoter-TSS (FBgn0051603) 7 FBgn0051603 FBgn0051603 FBtr0079690 tRNA:CR31603 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1448 chr2L 19509626 19509721 + 30 NA promoter-TSS (FBgn0032796) protein_coding-promoter-TSS (FBgn0032796) -913 FBgn0032796 FBgn0032796 FBtr0329963 CG10188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2358 chr2R 7747226 7747308 + 30 NA exon (FBgn0013756, exon 3 of 5) protein_coding-exon (FBgn0013756, exon 3 of 5) -1548 FBgn0085259 FBgn0085259 FBtr0112423 CG34230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3762 chr3L 8097386 8097440 + 30 NA exon (FBgn0262579, exon 5 of 10) protein_coding-exon (FBgn0262579, exon 5 of 10) -4819 FBgn0028379 FBgn0028379 FBtr0076683 fan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2929 chr2R 17435198 17435276 + 30 NA exon (FBgn0003731, exon 1 of 5) protein_coding-exon (FBgn0003731, exon 1 of 5) 163 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5229 chr3R 10172881 10173031 + 29 NA intron (FBgn0024321, intron 1 of 3) protein_coding-intron (FBgn0024321, intron 1 of 3) 14505 FBgn0051320 FBgn0051320 FBtr0082943 CG31320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2519 chr2R 10372510 10372575 + 29 NA intron (FBgn0001332, intron 1 of 3) protein_coding-intron (FBgn0001332, intron 1 of 3) 3826 FBgn0001332 FBgn0001332 FBtr0087492 L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3702 chr3L 6978835 6978897 + 29 NA Intergenic Intergenic -1180 FBgn0250849 FBgn0250849 FBtr0076933 CG32388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6341 chr3R 25518542 25518675 + 29 NA exon (FBgn0039683, exon 1 of 4) protein_coding-exon (FBgn0039683, exon 1 of 4) 295 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6351 chr3R 25533187 25533266 + 29 NA Intergenic Intergenic -7035 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3366 chr2RHet 2275338 2275440 + 29 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2396 chr2R 8548038 8548092 + 29 NA exon (FBgn0261673, exon 5 of 6) protein_coding-exon (FBgn0261673, exon 5 of 6) 4604 FBgn0033763 FBgn0033763 FBtr0301237 CG8646 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6979 chrX 1282492 1282546 + 29 NA promoter-TSS (FBgn0052813) protein_coding-promoter-TSS (FBgn0052813) -84 FBgn0052813 FBgn0052813 FBtr0330320 CG32813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3101 chr2R 20487370 20487428 + 29 NA promoter-TSS (FBgn0035033) protein_coding-promoter-TSS (FBgn0035033) -90 FBgn0035033 FBgn0035033 FBtr0072315 CG3548 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3562 chr3L 3811237 3811291 + 29 NA promoter-TSS (FBgn0035464) protein_coding-promoter-TSS (FBgn0035464) 1 FBgn0035464 FBgn0035464 FBtr0073150 CG12006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2667 chr2R 12716363 12716479 + 29 NA promoter-TSS (FBgn0263659) ncRNA-promoter-TSS (FBgn0263659) -1774 FBgn0263659 FBgn0263659 FBtr0310103 CR43650 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4189 chr3L 16023479 16023570 + 29 NA promoter-TSS (FBgn0263570) pre_miRNA-promoter-TSS (FBgn0263570) -824 FBgn0263570 FBgn0263570 FBtr0309724 mir-4941 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2804 chr2R 15302758 15302814 + 29 NA promoter-TSS (FBgn0050326) tRNA-promoter-TSS (FBgn0050326) 10 FBgn0050326 FBgn0050326 FBtr0086528 tRNA:CR30326 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6691 chrU 80116 80184 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6983 chrX 1377369 1377448 + 28 NA promoter-TSS (FBgn0003517) protein_coding-promoter-TSS (FBgn0003517) -355 FBgn0003517 FBgn0003517 FBtr0070291 sta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2972 chr2R 18205619 18205674 + 28 NA intron (FBgn0013272, intron 1 of 4) protein_coding-intron (FBgn0013272, intron 2 of 5) -4762 FBgn0013272 FBgn0013272 FBtr0071816 Gp150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3418 chr3L 613956 614039 + 28 NA Intergenic Intergenic 2649 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6253 chr3R 24610116 24610189 + 28 NA Intergenic Intergenic -5187 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2658 chr2R 12517526 12517580 + 28 NA exon (FBgn0040505, exon 9 of 9) protein_coding-exon (FBgn0040505, exon 9 of 9) 9963 FBgn0040505 FBgn0040505 FBtr0087118 Alk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_633 chr2L 9449761 9449851 + 28 NA promoter-TSS (FBgn0002973) protein_coding-promoter-TSS (FBgn0002973) -24 FBgn0002973 FBgn0002973 FBtr0079822 numb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6977 chrUextra 28981912 28981966 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_403 chr2L 5918485 5918564 + 28 NA exon (FBgn0043362, exon 10 of 18) protein_coding-exon (FBgn0043362, exon 10 of 18) 5129 FBgn0031751 FBgn0031751 FBtr0079152 CG9016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5829 chr3R 18182329 18182408 + 28 NA promoter-TSS (FBgn0038947) protein_coding-promoter-TSS (FBgn0038947) -39 FBgn0038947 FBgn0038947 FBtr0084209 sar1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5597 chr3R 14876609 14876673 + 28 NA intron (FBgn0004876, intron 3 of 8) protein_coding-intron (FBgn0004876, intron 3 of 7) 17385 FBgn0038676 FBgn0038676 FBtr0273301 CG6026 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4779 chr3R 3036902 3037021 + 27 NA Intergenic Intergenic -2824 FBgn0250845 FBgn0250845 FBtr0081604 CG1288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4514 chr3L 23930646 23930794 + 27 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 28501 FBgn0264570 FBgn0264570 FBtr0333470 CR43942 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3499 chr3L 1953502 1953556 + 27 NA exon (FBgn0262110, exon 14 of 18) protein_coding-exon (FBgn0262110, exon 14 of 18) 5774 FBgn0035295 FBgn0035295 FBtr0333430 Cnb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3379 chr2RHet 2373831 2373901 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5130 chr3R 8635691 8635769 + 27 NA Intergenic Intergenic 7021 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5848 chr3R 18838500 18838555 + 27 NA exon (FBgn0039038, exon 2 of 4) protein_coding-exon (FBgn0039038, exon 2 of 4) 393 FBgn0039038 FBgn0039038 FBtr0084343 CG6688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4404 chr3L 20103336 20103390 + 27 NA exon (FBgn0036937, exon 3 of 5) protein_coding-exon (FBgn0036937, exon 3 of 5) 1271 FBgn0036937 FBgn0036937 FBtr0074869 Ir76b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_654 chr2L 9862811 9862929 + 27 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 14581 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4875 chr3R 4419207 4419261 + 27 NA intron (FBgn0261929, intron 2 of 6) protein_coding-intron (FBgn0261929, intron 2 of 6) 15307 FBgn0261929 FBgn0261929 FBtr0330144 CG42796 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1528 chr2L 20388763 20388817 + 27 NA intron (FBgn0032857, intron 1 of 1) protein_coding-intron (FBgn0032857, intron 1 of 1) -6435 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4165 chr3L 15744581 15744635 + 27 NA Intergenic Intergenic -23078 FBgn0010105 FBgn0010105 FBtr0075579 comm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1919 chr2R 119020 119077 + 27 NA Intergenic Intergenic 11396 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4033 chr3L 13416699 13416753 + 27 NA TTS (FBgn0260459) protein_coding-TTS (FBgn0260459) 542 FBgn0053263 FBgn0053263 FBtr0075859 CG33263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2292 chr2R 6923215 6923269 + 27 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -49849 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1110 chr2L 15627917 15627971 + 27 NA promoter-TSS (FBgn0028945) protein_coding-promoter-TSS (FBgn0028945) -740 FBgn0028945 FBgn0028945 FBtr0080754 CG7631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4305 chr3L 17588998 17589052 + 27 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) 23400 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1379 chr2L 18512527 18512585 + 27 NA exon (FBgn0032684, exon 4 of 4) protein_coding-exon (FBgn0032684, exon 4 of 4) 2984 FBgn0032684 FBgn0032684 FBtr0081068 CG10178 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1153 chr2L 16129145 16129199 + 27 NA Intergenic Intergenic -4336 FBgn0028884 FBgn0028884 FBtr0080816 CG4892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6019 chr3R 22469644 22469746 + 27 NA Intergenic Intergenic 3947 FBgn0039444 FBgn0039444 FBtr0085035 TwdlD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5419 chr3R 12739469 12739553 + 27 NA intron (FBgn0263610, intron 1 of 7) ncRNA-intron (FBgn0263610, intron 1 of 7) 9444 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2081 chr2R 3768102 3768167 + 27 NA intron (FBgn0085390, intron 2 of 19) protein_coding-intron (FBgn0085390, intron 2 of 20) 5353 FBgn0085390 FBgn0085390 FBtr0308590 Dgk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1679 chr2L 21846132 21846240 + 27 NA Intergenic Intergenic 17593 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6803 chrU 2417278 2417518 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2622 chr2R 12125281 12125335 + 27 NA TTS (FBgn0034097) protein_coding-TTS (FBgn0034097) 1031 FBgn0034097 FBgn0034097 FBtr0087132 CG3687 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5071 chr3R 7664929 7665066 + 27 NA intron (FBgn0037956, intron 1 of 2) protein_coding-intron (FBgn0037956, intron 1 of 2) -17042 FBgn0037955 FBgn0037955 FBtr0082521 CG6950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5478 chr3R 13461961 13462015 + 27 NA Intergenic Intergenic 4587 FBgn0051573 FBgn0051573 FBtr0083472 tRNA:CR31573 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6099 chr3R 23322202 23322256 + 27 NA Intergenic Intergenic 5518 FBgn0262613 FBgn0262613 FBtr0305290 CG43139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2756 chr2R 14360077 14360134 + 27 NA intron (FBgn0028496, intron 7 of 18) protein_coding-intron (FBgn0028496, intron 7 of 18) -18138 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3353 chr2RHet 2244134 2244188 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6149 chr3R 23830252 23830315 + 27 NA Intergenic Intergenic -13810 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5429 chr3R 12781368 12781451 + 27 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -19517 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3787 chr3L 8620114 8620180 + 27 NA exon (FBgn0035917, exon 2 of 9) protein_coding-exon (FBgn0035917, exon 2 of 9) 2676 FBgn0035917 FBgn0035917 FBtr0089564 Zasp66 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4616 chr3R 712285 712363 + 27 NA Intergenic Intergenic -8069 FBgn0020280 FBgn0020280 FBtr0078852 laf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3509 chr3L 2202234 2202333 + 27 NA Intergenic Intergenic 4852 FBgn0035315 FBgn0035315 FBtr0072872 CG8960 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_692 chr2L 10700765 10700819 + 27 NA exon (FBgn0023496, exon 2 of 5) protein_coding-exon (FBgn0023496, exon 2 of 5) 666 FBgn0023496 FBgn0023496 FBtr0080124 Lip1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2120 chr2R 4235168 4235226 + 27 NA exon (FBgn0261588, exon 2 of 11) protein_coding-exon (FBgn0261588, exon 2 of 11) -10846 FBgn0033283 FBgn0033283 FBtr0088739 CG11635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5451 chr3R 13262182 13262328 + 27 NA intron (FBgn0038511, intron 2 of 9) protein_coding-intron (FBgn0038511, intron 2 of 9) 4195 FBgn0038510 FBgn0038510 FBtr0113244 CG14331 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1636 chr2L 21644010 21644125 + 27 NA exon (FBgn0023416, exon 18 of 19) protein_coding-exon (FBgn0023416, exon 18 of 19) 11480 FBgn0023416 FBgn0023416 FBtr0100324 Ac3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4858 chr3R 4218945 4219069 + 27 NA intron (FBgn0263416, intron 11 of 15) protein_coding-intron (FBgn0263416, intron 11 of 15) -5083 FBgn0051462 FBgn0051462 FBtr0081851 CG31462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_815 chr2L 12674530 12674584 + 27 NA intron (FBgn0004394, intron 3 of 4) protein_coding-intron (FBgn0004394, intron 3 of 4) -4049 FBgn0004394 FBgn0004394 FBtr0080393 pdm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3896 chr3L 10751181 10751238 + 27 NA Intergenic Intergenic -13883 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_856 chr2L 13248887 13248941 + 27 NA intron (FBgn0032495, intron 1 of 3) protein_coding-intron (FBgn0032495, intron 1 of 3) -2595 FBgn0051728 FBgn0051728 FBtr0305556 CG31728 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3217 chr2RHet 1084227 1084285 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_445 chr2L 6833888 6833949 + 27 NA intron (FBgn0051632, intron 4 of 4) protein_coding-intron (FBgn0051632, intron 4 of 4) 11601 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3514 chr3L 2248201 2248274 + 27 NA promoter-TSS (FBgn0052305) protein_coding-promoter-TSS (FBgn0052305) -398 FBgn0052305 FBgn0052305 FBtr0301322 CG32305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6013 chr3R 22426363 22426418 + 27 NA intron (FBgn0263289, intron 26 of 26) protein_coding-intron (FBgn0263289, intron 24 of 24) -18455 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2128 chr2R 4365612 4365684 + 27 NA intron (FBgn0050361, intron 17 of 18) protein_coding-intron (FBgn0050361, intron 11 of 12) 6160 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_430 chr2L 6549936 6549990 + 27 NA Intergenic Intergenic 7396 FBgn0031829 FBgn0031829 FBtr0079333 osm-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_933 chr2L 14323391 14323472 + 27 NA exon (FBgn0261563, exon 8 of 16) protein_coding-exon (FBgn0261563, exon 8 of 16) -4998 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2121 chr2R 4250344 4250398 + 27 NA promoter-TSS (FBgn0050364) protein_coding-promoter-TSS (FBgn0050364) 352 FBgn0250827 FBgn0250827 FBtr0112411 whip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1678 chr2L 21842603 21842657 + 27 NA Intergenic Intergenic 14037 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5802 chr3R 17585360 17585414 + 27 NA exon (FBgn0259237, exon 2 of 7) protein_coding-exon (FBgn0259237, exon 2 of 7) 891 FBgn0259237 FBgn0259237 FBtr0301691 CG42335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_526 chr2L 8565321 8565375 + 27 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -5540 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_224 chr2L 3403389 3403443 + 27 NA Intergenic Intergenic 5393 FBgn0085204 FBgn0085204 FBtr0112366 CG34175 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2747 chr2R 14191338 14191392 + 27 NA exon (FBgn0034327, exon 1 of 2) protein_coding-exon (FBgn0034327, exon 1 of 2) 117 FBgn0034327 FBgn0034327 FBtr0307186 CG14505 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4315 chr3L 17679577 17679631 + 27 NA Intergenic Intergenic -3511 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4463 chr3L 22922390 22922444 + 27 NA Intergenic Intergenic -16678 FBgn0037207 FBgn0037207 FBtr0078563 Mes2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3885 chr3L 10709867 10709995 + 27 NA Intergenic Intergenic -19954 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5586 chr3R 14762409 14762463 + 27 NA intron (FBgn0261262, intron 2 of 17) protein_coding-intron (FBgn0261262, intron 2 of 18) 7518 FBgn0261262 FBgn0261262 FBtr0304686 CG42613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1253 chr2L 17211397 17211451 + 27 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -27935 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6991 chrX 1465572 1465626 + 27 NA intron (FBgn0025390, intron 3 of 7) protein_coding-intron (FBgn0025390, intron 3 of 7) -13166 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5556 chr3R 14357268 14357336 + 27 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 14006 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6118 chr3R 23563676 23563738 + 27 NA intron (FBgn0005659, intron 1 of 4) protein_coding-intron (FBgn0005659, intron 1 of 4) 1445 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4268 chr3L 17181896 17181959 + 27 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 21964 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5773 chr3R 17118318 17118372 + 27 NA intron (FBgn0038880, intron 1 of 5) protein_coding-intron (FBgn0038880, intron 1 of 5) 1375 FBgn0038880 FBgn0038880 FBtr0084099 SIFR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5993 chr3R 22189496 22189550 + 27 NA Intergenic Intergenic 8313 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5134 chr3R 8649142 8649196 + 27 NA Intergenic Intergenic -6418 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6578 chr3RHet 1837786 1837840 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3685 chr3L 6836761 6836830 + 27 NA Intergenic Intergenic 53537 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1746 chr2L 22080389 22080515 + 27 NA exon (FBgn0032971, exon 1 of 1) protein_coding-exon (FBgn0032971, exon 1 of 1) 780 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_256 chr2L 3917242 3917296 + 27 NA exon (FBgn0051774, exon 7 of 9) protein_coding-exon (FBgn0051774, exon 7 of 9) -2981 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1002 chr2L 14731271 14731363 + 27 NA Intergenic Intergenic -1316 FBgn0261571 FBgn0261571 FBtr0302857 CG42685 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2015 chr2R 2084106 2084160 + 27 NA promoter-TSS (FBgn0262867) protein_coding-promoter-TSS (FBgn0262867) -266 FBgn0262867 FBgn0262867 FBtr0086003 Ptr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2428 chr2R 8942594 8942713 + 27 NA Intergenic Intergenic -5530 FBgn0033789 FBgn0033789 FBtr0087796 CG13324 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1032 chr2L 14962937 14962991 + 27 NA exon (FBgn0259213, exon 2 of 20) protein_coding-exon (FBgn0259213, exon 2 of 20) 9336 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4958 chr3R 5947799 5947873 + 27 NA promoter-TSS (FBgn0037789) protein_coding-promoter-TSS (FBgn0037789) 341 FBgn0051477 FBgn0051477 FBtr0082180 CG31477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6584 chr3RHet 2095991 2096106 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4088 chr3L 14190056 14190110 + 27 NA intron (FBgn0013718, intron 1 of 10) protein_coding-intron (FBgn0013718, intron 1 of 9) -6340 FBgn0052141 FBgn0052141 FBtr0075735 CG32141 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4338 chr3L 18028231 18028322 + 27 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -5141 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4424 chr3L 20866819 20866889 + 27 NA intron (FBgn0052432, intron 2 of 18) protein_coding-intron (FBgn0052432, intron 2 of 19) 11434 FBgn0052432 FBgn0052432 FBtr0333372 CG32432 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1557 chr2L 20576133 20576192 + 27 NA Intergenic Intergenic 13738 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6814 chrU 2647837 2647891 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4455 chr3L 22336020 22336074 + 27 NA intron (FBgn0004449, intron 1 of 11) protein_coding-intron (FBgn0004449, intron 1 of 8) 13169 FBgn0052450 FBgn0052450 FBtr0078501 CG32450 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2836 chr2R 15774205 15774272 + 27 NA Intergenic Intergenic -5813 FBgn0034477 FBgn0034477 FBtr0086341 CG13872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2463 chr2R 9405899 9405953 + 27 NA TTS (FBgn0033848) protein_coding-TTS (FBgn0033848) 3162 FBgn0033848 FBgn0033848 FBtr0087671 CG13330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_747 chr2L 11665574 11665663 + 27 NA Intergenic Intergenic 8158 FBgn0262786 FBgn0262786 FBtr0305896 CG43167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5548 chr3R 14332657 14332715 + 27 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) 38622 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6708 chrU 156860 156914 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6451 chr3R 26887178 26887280 + 27 NA promoter-TSS (FBgn0002413) protein_coding-promoter-TSS (FBgn0002413) -626 FBgn0002413 FBgn0002413 FBtr0085744 dco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_687 chr2L 10668167 10668247 + 27 NA exon (FBgn0051871, exon 2 of 5) protein_coding-exon (FBgn0051871, exon 2 of 5) 6120 FBgn0051871 FBgn0051871 FBtr0080104 CG31871 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_127 chr2L 1545606 1545714 + 27 NA Intergenic Intergenic -9470 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5562 chr3R 14417591 14417662 + 27 NA TTS (FBgn0038629) protein_coding-TTS (FBgn0038629) 877 FBgn0263974 FBgn0263974 FBtr0329922 qin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6715 chrU 204818 204878 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_768 chr2L 11948621 11948709 + 27 NA TTS (FBgn0032385) protein_coding-TTS (FBgn0032385) 700 FBgn0032385 FBgn0032385 FBtr0080282 CG16964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3663 chr3L 6388970 6389024 + 27 NA Intergenic Intergenic -4695 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1543 chr2L 20517315 20517395 + 27 NA Intergenic Intergenic 22249 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5705 chr3R 16163008 16163062 + 27 NA Intergenic Intergenic -1954 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4277 chr3L 17264840 17264894 + 27 NA Intergenic Intergenic 7351 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2970 chr2R 18180285 18180352 + 27 NA promoter-TSS (FBgn0034717) protein_coding-promoter-TSS (FBgn0034717) -604 FBgn0034717 FBgn0034717 FBtr0071812 CG5819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4606 chr3R 655902 655956 + 27 NA TTS (FBgn0037284) protein_coding-TTS (FBgn0037284) 306 FBgn0037283 FBgn0037283 FBtr0078874 CG14658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3939 chr3L 11845695 11845749 + 27 NA intron (FBgn0085449, intron 2 of 2) protein_coding-intron (FBgn0085449, intron 2 of 2) -4819 FBgn0040816 FBgn0040816 FBtr0076074 CG12521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6500 chr3R 27376076 27376130 + 27 NA intron (FBgn0039852, intron 2 of 8) protein_coding-intron (FBgn0039852, intron 2 of 8) 7218 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5801 chr3R 17578818 17578881 + 27 NA exon (FBgn0051233, exon 4 of 4) protein_coding-exon (FBgn0051233, exon 4 of 4) -1197 FBgn0051198 FBgn0051198 FBtr0084128 CG31198 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6985 chrX 1390215 1390289 + 27 NA promoter-TSS (FBgn0053513) protein_coding-promoter-TSS (FBgn0053513) 11590 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1112 chr2L 15639246 15639300 + 27 NA Intergenic Intergenic 9189 FBgn0028518 FBgn0028518 FBtr0080755 CG18480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5971 chr3R 22025962 22026076 + 27 NA Intergenic Intergenic -9092 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1902 chr2LHet 191794 191859 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_99 chr2L 1349310 1349364 + 27 NA Intergenic Intergenic 3532 FBgn0031332 FBgn0031332 FBtr0077948 CG5556 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6693 chrU 80597 80697 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2657 chr2R 12493875 12493929 + 27 NA Intergenic Intergenic -1186 FBgn0034143 FBgn0034143 FBtr0273388 CG8303 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1082 chr2L 15435934 15435992 + 27 NA TTS (FBgn0028892) protein_coding-TTS (FBgn0028892) 2601 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6547 chr3RHet 546029 546083 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_214 chr2L 3183271 3183351 + 27 NA intron (FBgn0085422, intron 12 of 12) protein_coding-intron (FBgn0085422, intron 12 of 12) 9322 FBgn0031512 FBgn0031512 FBtr0077578 CG15404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4406 chr3L 20163768 20163822 + 27 NA intron (FBgn0261556, intron 3 of 14) protein_coding-intron (FBgn0261556, intron 2 of 14) 14690 FBgn0261556 FBgn0261556 FBtr0332699 CG42674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3764 chr3L 8156872 8156926 + 27 NA intron (FBgn0035845, intron 2 of 3) protein_coding-intron (FBgn0035845, intron 1 of 2) 1719 FBgn0035845 FBgn0035845 FBtr0300119 CG13675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1879 chr2L 22902735 22902789 + 27 NA intron (FBgn0250907, intron 5 of 8) protein_coding-intron (FBgn0250907, intron 5 of 8) 15798 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6770 chrU 1343386 1343440 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4233 chr3L 16741866 16741922 + 27 NA Intergenic Intergenic -6695 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4651 chr3R 1265518 1265572 + 27 NA intron (FBgn0037326, intron 3 of 7) protein_coding-intron (FBgn0037326, intron 3 of 7) -12566 FBgn0037325 FBgn0037325 FBtr0078793 CG12147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4200 chr3L 16234785 16234839 + 27 NA Intergenic Intergenic 3989 FBgn0263608 FBgn0263608 FBtr0075460 l(3)72Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2707 chr2R 13541754 13541816 + 27 NA promoter-TSS (FBgn0050106) protein_coding-promoter-TSS (FBgn0050106) 16 FBgn0050106 FBgn0050106 FBtr0086893 CCHa1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1730 chr2L 22051061 22051115 + 27 NA Intergenic Intergenic 3157 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6304 chr3R 25264266 25264320 + 27 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -41127 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4069 chr3L 13980105 13980168 + 27 NA promoter-TSS (FBgn0036394) protein_coding-promoter-TSS (FBgn0036394) 416 FBgn0036393 FBgn0036393 FBtr0333024 CG17362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1189 chr2L 16548042 16548101 + 27 NA intron (FBgn0259735, intron 1 of 4) protein_coding-intron (FBgn0259735, intron 1 of 2) 1888 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8 chr2L 60639 60693 + 27 NA intron (FBgn0051973, intron 1 of 13) protein_coding-intron (FBgn0051973, intron 1 of 13) -1398 FBgn0051973 FBgn0051973 FBtr0309229 Cda5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2772 chr2R 14655826 14655880 + 27 NA exon (FBgn0034389, exon 2 of 12) protein_coding-exon (FBgn0034389, exon 2 of 12) 1272 FBgn0034389 FBgn0034389 FBtr0110971 Mctp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3604 chr3L 5328568 5328686 + 27 NA Intergenic Intergenic -6557 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_297 chr2L 4426222 4426280 + 27 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -7203 FBgn0051963 FBgn0051963 FBtr0077458 tRNA:CR31963 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2258 chr2R 6246272 6246352 + 27 NA intron (FBgn0261698, intron 1 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) -1406 FBgn0263270 FBgn0263270 FBtr0308492 CG43396 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1480 chr2L 19841863 19841935 + 27 NA intron (FBgn0263873, intron 1 of 14) protein_coding-intron (FBgn0263873, intron 2 of 15) -14202 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3394 chr2RHet 3238141 3238201 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5823 chr3R 18115830 18115930 + 27 NA exon (FBgn0051163, exon 14 of 19) protein_coding-exon (FBgn0051163, exon 14 of 19) -2768 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4566 chr3LHet 1167866 1167920 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2639 chr2R 12335651 12335750 + 27 NA TTS (FBgn0034129) protein_coding-TTS (FBgn0034129) 2209 FBgn0034129 FBgn0034129 FBtr0087159 CG15925 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1791 chr2L 22347896 22347950 + 27 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -6432 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6879 chrUextra 308006 308060 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5631 chr3R 15417402 15417479 + 27 NA exon (FBgn0260003, exon 31 of 35) protein_coding-exon (FBgn0260003, exon 31 of 35) 5522 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5054 chr3R 7216821 7216875 + 27 NA intron (FBgn0004595, intron 6 of 7) protein_coding-intron (FBgn0004595, intron 6 of 7) -16771 FBgn0037892 FBgn0037892 FBtr0082384 mRpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3037 chr2R 19328237 19328305 + 27 NA exon (FBgn0026384, exon 1 of 2) protein_coding-exon (FBgn0026384, exon 1 of 2) 317 FBgn0026384 FBgn0026384 FBtr0072023 Or59a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_502 chr2L 8247246 8247320 + 27 NA exon (FBgn0032010, exon 8 of 14) protein_coding-exon (FBgn0032010, exon 8 of 14) -3280 FBgn0262359 FBgn0262359 FBtr0304640 CG43057 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5088 chr3R 8063508 8063671 + 27 NA promoter-TSS (FBgn0038006) protein_coding-promoter-TSS (FBgn0038006) -963 FBgn0038006 FBgn0038006 FBtr0308561 Cyp313a2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4067 chr3L 13975818 13975894 + 27 NA exon (FBgn0036391, exon 6 of 6) protein_coding-exon (FBgn0036391, exon 6 of 6) -3864 FBgn0036393 FBgn0036393 FBtr0333024 CG17362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6254 chr3R 24611362 24611419 + 27 NA Intergenic Intergenic -3949 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1513 chr2L 20225991 20226045 + 27 NA Intergenic Intergenic -22205 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6092 chr3R 23264662 23264723 + 27 NA Intergenic Intergenic -1342 FBgn0263401 FBgn0263401 FBtr0309178 CG43447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_68 chr2L 1049275 1049333 + 27 NA TTS (FBgn0003310) protein_coding-TTS (FBgn0003310) 12058 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3843 chr3L 9996854 9996917 + 27 NA exon (FBgn0040823, exon 2 of 6) protein_coding-exon (FBgn0040823, exon 2 of 6) 29134 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5477 chr3R 13453409 13453463 + 27 NA exon (FBgn0038531, exon 2 of 5) protein_coding-exon (FBgn0038531, exon 2 of 5) 587 FBgn0038531 FBgn0038531 FBtr0289974 CG14325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2928 chr2R 17434123 17434177 + 27 NA promoter-TSS (FBgn0003731) protein_coding-promoter-TSS (FBgn0003731) -924 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1227 chr2L 17038193 17038261 + 27 NA Intergenic Intergenic 4938 FBgn0264346 FBgn0264346 FBtr0332013 CR43802 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4144 chr3L 15331749 15331852 + 27 NA exon (FBgn0036494, exon 1 of 1) protein_coding-exon (FBgn0036494, exon 1 of 1) 2008 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4146 chr3L 15334228 15334304 + 27 NA exon (FBgn0036494, exon 1 of 1) protein_coding-exon (FBgn0036494, exon 1 of 1) 4474 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4787 chr3R 3119229 3119337 + 27 NA intron (FBgn0259172, intron 5 of 8) protein_coding-intron (FBgn0259172, intron 4 of 7) 7599 FBgn0045843 FBgn0045843 FBtr0081581 RacGAP84C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4764 chr3R 2837079 2837133 + 27 NA Intergenic Intergenic -40951 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5442 chr3R 13126555 13126609 + 27 NA Intergenic Intergenic 13072 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2346 chr2R 7649550 7649604 + 27 NA Intergenic Intergenic -6381 FBgn0033650 FBgn0033650 FBtr0088029 CG13193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5898 chr3R 20335837 20335970 + 27 NA exon (FBgn0004118, exon 10 of 11) protein_coding-exon (FBgn0004118, exon 10 of 11) 4920 FBgn0004118 FBgn0004118 FBtr0084682 nAcRbeta-96A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3659 chr3L 6307813 6307867 + 27 NA Intergenic Intergenic -5871 FBgn0041625 FBgn0041625 FBtr0077004 Or65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1977 chr2R 1341584 1341638 + 27 NA TTS (FBgn0259247) protein_coding-TTS (FBgn0259247) 37754 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_201 chr2L 2939240 2939294 + 27 NA intron (FBgn0041111, intron 3 of 12) protein_coding-intron (FBgn0041111, intron 3 of 12) -17644 FBgn0010263 FBgn0010263 FBtr0077640 Rbp9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2372 chr2R 7980616 7980670 + 27 NA intron (FBgn0086677, intron 1 of 2) protein_coding-intron (FBgn0086677, intron 1 of 2) 11862 FBgn0033680 FBgn0033680 FBtr0087981 CG13186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3938 chr3L 11838766 11838821 + 27 NA Intergenic Intergenic 2110 FBgn0040816 FBgn0040816 FBtr0076074 CG12521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5250 chr3R 10699138 10699193 + 27 NA Intergenic Intergenic -5998 FBgn0038268 FBgn0038268 FBtr0082997 CG3631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4929 chr3R 5372899 5373002 + 27 NA TTS (FBgn0260722) ncRNA-TTS (FBgn0260722) 4110 FBgn0037705 FBgn0037705 FBtr0082118 mura protein_coding Nup98-S2-pascual-garcia2017_R1_peak_666 chr2L 10040658 10040712 + 27 NA Intergenic Intergenic 7991 FBgn0027600 FBgn0027600 FBtr0079934 obst-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2529 chr2R 10562382 10562436 + 27 NA TTS (FBgn0050480) protein_coding-TTS (FBgn0050480) 3232 FBgn0050479 FBgn0050479 FBtr0332468 CG30479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4044 chr3L 13634370 13634436 + 27 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 3 of 12) 20466 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3389 chr2RHet 3008441 3008513 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5925 chr3R 21439774 21439843 + 27 NA exon (FBgn0039346, exon 1 of 1) protein_coding-exon (FBgn0039346, exon 1 of 1) 281 FBgn0039346 FBgn0039346 FBtr0084883 CG5079 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1260 chr2L 17262781 17262930 + 27 NA Intergenic Intergenic -2123 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3622 chr3L 5827357 5827417 + 27 NA intron (FBgn0003984, intron 1 of 5) protein_coding-intron (FBgn0003984, intron 1 of 5) 11377 FBgn0003984 FBgn0003984 FBtr0077082 vn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2 chr2L 12845 12899 + 27 NA exon (FBgn0002121, exon 6 of 9) protein_coding-exon (FBgn0002121, exon 6 of 9) 5343 FBgn0031208 FBgn0031208 FBtr0330654 CG11023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2513 chr2R 10318543 10318610 + 27 NA intron (FBgn0013725, intron 1 of 1) protein_coding-intron (FBgn0013725, intron 1 of 1) 1264 FBgn0013725 FBgn0013725 FBtr0087516 phyl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3023 chr2R 19006226 19006289 + 27 NA Intergenic Intergenic 7308 FBgn0034824 FBgn0034824 FBtr0071975 Klp59C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5144 chr3R 8771202 8771275 + 27 NA Intergenic Intergenic -16236 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5353 chr3R 12187180 12187251 + 27 NA exon (FBgn0038422, exon 5 of 5) protein_coding-exon (FBgn0038422, exon 5 of 5) -1385 FBgn0259917 FBgn0259917 FBtr0300198 CG42446 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1767 chr2L 22218390 22218453 + 27 NA Intergenic Intergenic -4156 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4390 chr3L 19422568 19422640 + 27 NA Intergenic Intergenic 4802 FBgn0262027 FBgn0262027 FBtr0303863 CR42838 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2079 chr2R 3721859 3721937 + 27 NA TTS (FBgn0033229) protein_coding-TTS (FBgn0033229) 2027 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3532 chr3L 2941108 2941162 + 27 NA exon (FBgn0262593, exon 5 of 9) protein_coding-exon (FBgn0262593, exon 5 of 9) 10483 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2218 chr2R 5693401 5693479 + 27 NA intron (FBgn0027589, intron 1 of 8) protein_coding-intron (FBgn0027589, intron 1 of 8) 930 FBgn0027589 FBgn0027589 FBtr0088495 CG1688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_694 chr2L 10719861 10719915 + 27 NA Intergenic Intergenic -4386 FBgn0032289 FBgn0032289 FBtr0273319 CG6431 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5205 chr3R 9725724 9725817 + 27 NA Intergenic Intergenic -1811 FBgn0000576 FBgn0000576 FBtr0082863 ems protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3294 chr2RHet 1923323 1923409 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2310 chr2R 7356758 7356813 + 27 NA Intergenic Intergenic -6425 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3605 chr3L 5333983 5334109 + 27 NA Intergenic Intergenic -1138 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_1979 chr2R 1346596 1346650 + 27 NA Intergenic Intergenic 36718 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_825 chr2L 12764702 12764756 + 27 NA Intergenic Intergenic -2889 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4477 chr3L 23446841 23446895 + 27 NA Intergenic Intergenic -102157 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_24 chr2L 701586 701640 + 27 NA intron (FBgn0000497, intron 2 of 11) protein_coding-intron (FBgn0000497, intron 2 of 11) 13355 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1704 chr2L 21961632 21961713 + 27 NA Intergenic Intergenic 31261 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_581 chr2L 8818116 8818208 + 27 NA Intergenic Intergenic -7463 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5620 chr3R 15276614 15276668 + 27 NA intron (FBgn0051221, intron 3 of 4) protein_coding-intron (FBgn0051221, intron 3 of 4) 12147 FBgn0038708 FBgn0038708 FBtr0083769 CG6255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5410 chr3R 12653590 12653659 + 27 NA exon (FBgn0000014, exon 1 of 5) protein_coding-exon (FBgn0000014, exon 1 of 5) 2143 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5986 chr3R 22143776 22143874 + 27 NA promoter-TSS (FBgn0053970) protein_coding-promoter-TSS (FBgn0053970) 7172 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3533 chr3L 2944146 2944200 + 27 NA exon (FBgn0262593, exon 6 of 6) protein_coding-exon (FBgn0262593, exon 6 of 6) 7445 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1081 chr2L 15432965 15433108 + 27 NA promoter-TSS (FBgn0028892) protein_coding-promoter-TSS (FBgn0028892) -326 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3358 chr2RHet 2253130 2253184 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3183 chr2RHet 551827 551896 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4280 chr3L 17304470 17304524 + 27 NA Intergenic Intergenic -3627 FBgn0262376 FBgn0262376 FBtr0304211 mir-219 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_686 chr2L 10662037 10662093 + 27 NA promoter-TSS (FBgn0051871) protein_coding-promoter-TSS (FBgn0051871) -22 FBgn0051871 FBgn0051871 FBtr0080104 CG31871 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1021 chr2L 14910951 14911005 + 27 NA intron (FBgn0259213, intron 19 of 19) protein_coding-intron (FBgn0259213, intron 19 of 19) -13757 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_462 chr2L 7144983 7145037 + 27 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -11483 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5187 chr3R 9434608 9434710 + 27 NA promoter-TSS (FBgn0261819) protein_coding-promoter-TSS (FBgn0261819) 309 FBgn0038160 FBgn0038160 FBtr0082861 CG9759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5857 chr3R 19026896 19026950 + 27 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) 2833 FBgn0011596 FBgn0011596 FBtr0084399 fzo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6342 chr3R 25519232 25519446 + 27 NA exon (FBgn0039683, exon 3 of 4) protein_coding-exon (FBgn0039683, exon 3 of 4) 1026 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4840 chr3R 3992685 3992762 + 27 NA exon (FBgn0001138, exon 4 of 9) protein_coding-exon (FBgn0001138, exon 4 of 9) 14441 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1619 chr2L 21360126 21360229 + 27 NA Intergenic Intergenic -1039 FBgn0023090 FBgn0023090 FBtr0081516 dtr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5496 chr3R 13716785 13716865 + 27 NA exon (FBgn0053547, exon 12 of 27) protein_coding-exon (FBgn0053547, exon 12 of 27) -15361 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1009 chr2L 14747913 14747968 + 27 NA Intergenic Intergenic -2730 FBgn0260955 FBgn0260955 FBtr0301742 CG42587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1296 chr2L 17659310 17659403 + 27 NA exon (FBgn0015609, exon 17 of 22) protein_coding-exon (FBgn0015609, exon 17 of 22) 31497 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5083 chr3R 7947036 7947142 + 27 NA TTS (FBgn0037992) protein_coding-TTS (FBgn0037992) 6830 FBgn0037992 FBgn0037992 FBtr0308294 CG4702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2884 chr2R 16616180 16616299 + 27 NA exon (FBgn0034546, exon 4 of 6) protein_coding-exon (FBgn0034546, exon 4 of 6) 1876 FBgn0034546 FBgn0034546 FBtr0086240 CG13442 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_722 chr2L 11297472 11297549 + 27 NA Intergenic Intergenic -6433 FBgn0263328 FBgn0263328 FBtr0308751 CR43409 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6216 chr3R 24391713 24391776 + 27 NA Intergenic Intergenic 19090 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1706 chr2L 21965147 21965306 + 27 NA Intergenic Intergenic 27707 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2883 chr2R 16599619 16599704 + 27 NA intron (FBgn0040726, intron 1 of 7) protein_coding-intron (FBgn0040726, intron 1 of 7) 13306 FBgn0040726 FBgn0040726 FBtr0086238 dpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5219 chr3R 9923468 9923610 + 27 NA promoter-TSS (FBgn0038199) protein_coding-promoter-TSS (FBgn0038199) 263 FBgn0038200 FBgn0038200 FBtr0082917 CG9920 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6485 chr3R 27184187 27184241 + 27 NA intron (FBgn0085376, intron 9 of 16) protein_coding-intron (FBgn0085376, intron 9 of 16) -13935 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1883 chr2L 22908176 22908273 + 27 NA exon (FBgn0250907, exon 4 of 9) protein_coding-exon (FBgn0250907, exon 4 of 9) 10336 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6242 chr3R 24597390 24597497 + 27 NA Intergenic Intergenic -13487 FBgn0039598 FBgn0039598 FBtr0085313 CG14061 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5653 chr3R 15625366 15625420 + 27 NA intron (FBgn0014135, intron 3 of 4) protein_coding-intron (FBgn0014135, intron 3 of 4) -3019 FBgn0051471 FBgn0051471 FBtr0083794 tRNA:CR31471 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5286 chr3R 11396297 11396369 + 27 NA Intergenic Intergenic -17839 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_486 chr2L 7906676 7906730 + 27 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -16109 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2860 chr2R 16116408 16116462 + 27 NA promoter-TSS (FBgn0011869) tRNA-promoter-TSS (FBgn0011869) -551 FBgn0011869 FBgn0011869 FBtr0086312 tRNA:G3:56EFa tRNA Nup98-S2-pascual-garcia2017_R1_peak_4605 chr3R 652238 652292 + 27 NA Intergenic Intergenic 3970 FBgn0037283 FBgn0037283 FBtr0078874 CG14658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1815 chr2L 22548645 22548732 + 27 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 76206 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_631 chr2L 9351270 9351324 + 27 NA TTS (FBgn0032111) protein_coding-TTS (FBgn0032111) 827 FBgn0032111 FBgn0032111 FBtr0079805 CG13110 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3773 chr3L 8372307 8372399 + 27 NA exon (FBgn0001253, exon 3 of 7) protein_coding-exon (FBgn0001253, exon 3 of 7) 6848 FBgn0001253 FBgn0001253 FBtr0076607 ImpE1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_534 chr2L 8614001 8614080 + 27 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -5988 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4707 chr3R 2288465 2288596 + 27 NA Intergenic Intergenic -5604 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2744 chr2R 14146099 14146153 + 27 NA Intergenic Intergenic 18572 FBgn0003022 FBgn0003022 FBtr0086768 Ote protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3092 chr2R 20333910 20333964 + 27 NA exon (FBgn0035005, exon 1 of 1) protein_coding-exon (FBgn0035005, exon 1 of 1) 914 FBgn0035005 FBgn0035005 FBtr0072293 CG3483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_396 chr2L 5820177 5820242 + 27 NA Intergenic Intergenic -1816 FBgn0051644 FBgn0051644 FBtr0079159 CG31644 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_672 chr2L 10185227 10185281 + 27 NA exon (FBgn0028675, exon 20 of 24) protein_coding-exon (FBgn0028675, exon 20 of 24) 6242 FBgn0051874 FBgn0051874 FBtr0079964 CG31874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1700 chr2L 21955248 21955336 + 27 NA Intergenic Intergenic 37641 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6269 chr3R 24908995 24909063 + 27 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 19479 FBgn0039633 FBgn0039633 FBtr0330300 CG11873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4140 chr3L 15207599 15207702 + 27 NA Intergenic Intergenic 6706 FBgn0036490 FBgn0036490 FBtr0075644 CG6888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3348 chr2RHet 2216355 2216438 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2686 chr2R 13217611 13217665 + 27 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -22831 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2380 chr2R 8102382 8102470 + 27 NA TTS (FBgn0033701) protein_coding-TTS (FBgn0033701) 917 FBgn0033701 FBgn0033701 FBtr0087995 CG13171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_336 chr2L 4823867 4823921 + 27 NA intron (FBgn0031632, intron 1 of 4) protein_coding-intron (FBgn0031632, intron 1 of 4) 2118 FBgn0031632 FBgn0031632 FBtr0077384 CG15628 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4042 chr3L 13550177 13550251 + 27 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -37509 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7069 chrX 5860341 5860395 + 27 NA promoter-TSS (FBgn0029830) protein_coding-promoter-TSS (FBgn0029830) 54 FBgn0029830 FBgn0029830 FBtr0070865 Grip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_316 chr2L 4569702 4569756 + 27 NA intron (FBgn0053196, intron 5 of 66) protein_coding-intron (FBgn0053196, intron 5 of 46) 8472 FBgn0031613 FBgn0031613 FBtr0077444 HP6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1895 chr2LHet 21067 21161 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5021 chr3R 6884679 6884806 + 27 NA Intergenic Intergenic -29400 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_538 chr2L 8626996 8627050 + 27 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 6995 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2869 chr2R 16246835 16246920 + 27 NA Intergenic Intergenic -4319 FBgn0034507 FBgn0034507 FBtr0290122 CG11192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3246 chr2RHet 1551454 1551535 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2147 chr2R 4645942 4646029 + 27 NA exon (FBgn0027585, exon 7 of 8) protein_coding-exon (FBgn0027585, exon 7 of 8) 21110 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_821 chr2L 12746967 12747029 + 27 NA Intergenic Intergenic 14842 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_254 chr2L 3835265 3835382 + 27 NA Intergenic Intergenic -1519 FBgn0004567 FBgn0004567 FBtr0077500 slp2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5977 chr3R 22108609 22108728 + 27 NA Intergenic Intergenic 20284 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2261 chr2R 6268515 6268569 + 27 NA promoter-TSS (FBgn0033515) protein_coding-promoter-TSS (FBgn0033515) -928 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6568 chr3RHet 1202004 1202071 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4336 chr3L 18022763 18022820 + 27 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -10626 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2484 chr2R 9685460 9685553 + 27 NA intron (FBgn0033869, intron 2 of 4) protein_coding-intron (FBgn0033869, intron 2 of 4) 3224 FBgn0033869 FBgn0033869 FBtr0087630 Cpr50Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_573 chr2L 8795414 8795479 + 27 NA Intergenic Intergenic -12952 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5317 chr3R 11746573 11746635 + 27 NA promoter-TSS (FBgn0038385) protein_coding-promoter-TSS (FBgn0038385) -16 FBgn0038385 FBgn0038385 FBtr0083201 CG4221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5690 chr3R 15980945 15981002 + 27 NA Intergenic Intergenic -14185 FBgn0038774 FBgn0038774 FBtr0083866 CG5023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1434 chr2L 19316463 19316557 + 27 NA Intergenic Intergenic 16204 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2417 chr2R 8848761 8848815 + 27 NA Intergenic Intergenic 7727 FBgn0033787 FBgn0033787 FBtr0087792 CG13321 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1137 chr2L 16037319 16037424 + 27 NA exon (FBgn0028644, exon 7 of 8) protein_coding-exon (FBgn0028644, exon 7 of 8) -7181 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4278 chr3L 17275914 17276001 + 27 NA Intergenic Intergenic 18441 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6734 chrU 283364 283536 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_388 chr2L 5751078 5751132 + 27 NA intron (FBgn0031736, intron 1 of 3) protein_coding-intron (FBgn0031736, intron 1 of 3) 4948 FBgn0031735 FBgn0031735 FBtr0079136 CG11029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6468 chr3R 26987488 26987542 + 27 NA intron (FBgn0086704, intron 6 of 8) protein_coding-intron (FBgn0013973, intron 16 of 16) 7310 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2568 chr2R 11125188 11125257 + 27 NA intron (FBgn0259878, intron 2 of 8) protein_coding-intron (FBgn0259878, intron 2 of 8) 3862 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5360 chr3R 12228669 12228734 + 27 NA intron (FBgn0003513, intron 1 of 8) protein_coding-intron (FBgn0003513, intron 1 of 7) 711 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5015 chr3R 6762336 6762390 + 27 NA Intergenic Intergenic -13643 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3129 chr2R 20999484 20999567 + 27 NA Intergenic Intergenic -12814 FBgn0003715 FBgn0003715 FBtr0330231 CG16778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6394 chr3R 26084596 26084650 + 27 NA Intergenic Intergenic 5719 FBgn0039761 FBgn0039761 FBtr0085618 CG18404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2581 chr2R 11379597 11379651 + 27 NA intron (FBgn0034022, intron 1 of 3) protein_coding-intron (FBgn0034022, intron 1 of 3) 5088 FBgn0034022 FBgn0034022 FBtr0273307 CG12964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5814 chr3R 17928263 17928319 + 27 NA promoter-TSS (FBgn0038931) protein_coding-promoter-TSS (FBgn0038931) -845 FBgn0038931 FBgn0038931 FBtr0084181 CG13407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3329 chr2RHet 2129788 2129842 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2067 chr2R 3326892 3327048 + 27 NA Intergenic Intergenic -1228 FBgn0033169 FBgn0033169 FBtr0088971 CG11123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6310 chr3R 25354609 25354674 + 27 NA Intergenic Intergenic -5717 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6197 chr3R 24217676 24217782 + 27 NA Intergenic Intergenic -26201 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2833 chr2R 15690069 15690181 + 27 NA promoter-TSS (FBgn0011897) tRNA-promoter-TSS (FBgn0011897) 29 FBgn0011897 FBgn0011897 FBtr0086334 tRNA:K2:56EF tRNA Nup98-S2-pascual-garcia2017_R1_peak_3263 chr2RHet 1865936 1866007 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5440 chr3R 13111761 13111835 + 27 NA TTS (FBgn0051419) protein_coding-TTS (FBgn0051419) 1162 FBgn0263500 FBgn0263500 FBtr0309518 CR43489 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4329 chr3L 17974163 17974217 + 27 NA intron (FBgn0000568, intron 4 of 7) protein_coding-intron (FBgn0000568, intron 2 of 5) 21988 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2737 chr2R 14088606 14088661 + 27 NA Intergenic Intergenic -6627 FBgn0050114 FBgn0050114 FBtr0086753 CG30114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4672 chr3R 1673703 1673757 + 27 NA promoter-TSS (FBgn0037389) pseudogene-promoter-TSS (FBgn0037389) 788 FBgn0037388 FBgn0037388 FBtr0078645 CG14676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6395 chr3R 26085679 26085733 + 27 NA Intergenic Intergenic 6802 FBgn0039761 FBgn0039761 FBtr0085618 CG18404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3104 chr2R 20520641 20520695 + 27 NA promoter-TSS (FBgn0264328) ncRNA-promoter-TSS (FBgn0264328) -213 FBgn0264328 FBgn0264328 FBtr0331957 CR43787 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4877 chr3R 4457003 4457066 + 27 NA Intergenic Intergenic 4566 FBgn0026399 FBgn0026399 FBtr0310300 Or85e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_313 chr2L 4523954 4524008 + 27 NA exon (FBgn0053196, exon 30 of 47) protein_coding-exon (FBgn0053196, exon 30 of 47) -46957 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4763 chr3R 2830397 2830456 + 27 NA Intergenic Intergenic -47631 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3488 chr3L 1822475 1822556 + 27 NA TTS (FBgn0027790) protein_coding-TTS (FBgn0027790) 6427 FBgn0035279 FBgn0035279 FBtr0299561 Cpr62Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3047 chr2R 19539707 19539764 + 27 NA intron (FBgn0004795, intron 9 of 11) protein_coding-intron (FBgn0004795, intron 9 of 11) -5359 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2277 chr2R 6573119 6573196 + 27 NA intron (FBgn0024836, intron 1 of 5) protein_coding-intron (FBgn0024836, intron 1 of 5) 12307 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4588 chr3LHet 2476172 2476241 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1024 chr2L 14922755 14922869 + 27 NA intron (FBgn0259213, intron 10 of 19) protein_coding-intron (FBgn0259213, intron 10 of 19) -1923 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_459 chr2L 7114689 7114743 + 27 NA intron (FBgn0085407, intron 1 of 4) protein_coding-intron (FBgn0085407, intron 2 of 5) 18811 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3374 chr2RHet 2353314 2353415 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1997 chr2R 1841811 1841891 + 27 NA Intergenic Intergenic -3509 FBgn0033047 FBgn0033047 FBtr0085966 CG7882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6356 chr3R 25538225 25538297 + 27 NA Intergenic Intergenic -2000 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5014 chr3R 6751956 6752051 + 27 NA Intergenic Intergenic -24003 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6229 chr3R 24535215 24535302 + 27 NA intron (FBgn0027655, intron 9 of 28) protein_coding-intron (FBgn0027655, intron 9 of 28) 13294 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3093 chr2R 20367151 20367205 + 27 NA intron (FBgn0035010, intron 1 of 8) protein_coding-intron (FBgn0035010, intron 1 of 8) 4269 FBgn0035009 FBgn0035009 FBtr0072297 CG16837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4154 chr3L 15414013 15414084 + 27 NA Intergenic Intergenic 13116 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1334 chr2L 17988968 17989071 + 27 NA TTS (FBgn0032658) protein_coding-TTS (FBgn0032658) -1399 FBgn0051742 FBgn0051742 FBtr0081025 CG31742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7167 chrX 12765059 12765115 + 27 NA intron (FBgn0259171, intron 2 of 9) protein_coding-intron (FBgn0259171, intron 2 of 9) -13332 FBgn0030429 FBgn0030429 FBtr0073699 CG4661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1974 chr2R 1314828 1314945 + 27 NA intron (FBgn0259247, intron 2 of 7) protein_coding-intron (FBgn0259247, intron 2 of 7) 11029 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6138 chr3R 23721952 23722018 + 27 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 9580 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_987 chr2L 14627147 14627201 + 27 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 10905 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4549 chr3LHet 534651 534715 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5052 chr3R 7216065 7216166 + 27 NA intron (FBgn0004595, intron 6 of 7) protein_coding-intron (FBgn0004595, intron 6 of 7) -17504 FBgn0037892 FBgn0037892 FBtr0082384 mRpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_442 chr2L 6816157 6816222 + 27 NA Intergenic Intergenic -6128 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_456 chr2L 7074262 7074361 + 27 NA exon (FBgn0031888, exon 3 of 5) protein_coding-exon (FBgn0031888, exon 3 of 5) 6328 FBgn0031887 FBgn0031887 FBtr0289952 CG11289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6989 chrX 1435022 1435076 + 27 NA intron (FBgn0025390, intron 7 of 7) protein_coding-intron (FBgn0025390, intron 7 of 7) 17384 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2389 chr2R 8294916 8295056 + 27 NA promoter-TSS (FBgn0033730) protein_coding-promoter-TSS (FBgn0033730) -355 FBgn0033730 FBgn0033730 FBtr0087922 Cpr49Ag protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5089 chr3R 8065760 8065860 + 27 NA promoter-TSS (FBgn0038007) protein_coding-promoter-TSS (FBgn0038007) -979 FBgn0038007 FBgn0038007 FBtr0082617 Cyp313a3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5718 chr3R 16263495 16263572 + 27 NA exon (FBgn0262869, exon 2 of 20) protein_coding-exon (FBgn0262869, exon 2 of 20) 29546 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2958 chr2R 17943258 17943320 + 27 NA TTS (FBgn0034683) protein_coding-TTS (FBgn0034683) 1897 FBgn0034683 FBgn0034683 FBtr0071805 CG13500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4240 chr3L 16824569 16824623 + 27 NA Intergenic Intergenic -2422 FBgn0036665 FBgn0036665 FBtr0273320 CG13024 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_309 chr2L 4496972 4497026 + 27 NA exon (FBgn0053196, exon 69 of 82) protein_coding-exon (FBgn0053196, exon 69 of 82) -19975 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4865 chr3R 4289919 4289975 + 27 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 13368 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7241 chrX 18209991 18210091 + 27 NA intron (FBgn0030912, intron 1 of 3) protein_coding-intron (FBgn0030912, intron 2 of 3) 141 FBgn0030912 FBgn0030912 FBtr0074580 CG6023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6081 chr3R 23156014 23156098 + 27 NA exon (FBgn0039511, exon 1 of 1) protein_coding-exon (FBgn0039511, exon 1 of 1) 548 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5647 chr3R 15556946 15557096 + 27 NA intron (FBgn0024963, intron 1 of 12) protein_coding-intron (FBgn0024963, intron 1 of 11) 340 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3627 chr3L 5930679 5930733 + 27 NA exon (FBgn0053993, exon 3 of 6) protein_coding-exon (FBgn0053993, exon 3 of 6) -2303 FBgn0053993 FBgn0053993 FBtr0301034 CG33993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1698 chr2L 21952612 21952666 + 27 NA Intergenic Intergenic 36278 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6461 chr3R 26964507 26964561 + 27 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 4420 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7199 chrX 14691435 14691489 + 27 NA exon (FBgn0003301, exon 8 of 18) protein_coding-exon (FBgn0003301, exon 8 of 18) -10878 FBgn0015010 FBgn0015010 FBtr0073937 Ag5r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2965 chr2R 18130588 18130653 + 27 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -14896 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6328 chr3R 25471600 25471725 + 27 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 14044 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4423 chr3L 20841464 20841542 + 27 NA exon (FBgn0052432, exon 11 of 20) protein_coding-exon (FBgn0052432, exon 11 of 20) 6416 FBgn0037031 FBgn0037031 FBtr0333371 CG11456 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4127 chr3L 15010467 15010554 + 27 NA exon (FBgn0261090, exon 5 of 8) protein_coding-exon (FBgn0261090, exon 5 of 8) -3348 FBgn0036463 FBgn0036463 FBtr0333876 Reck protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2983 chr2R 18348425 18348508 + 27 NA Intergenic Intergenic -5528 FBgn0034731 FBgn0034731 FBtr0300683 CG10384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1461 chr2L 19690191 19690262 + 27 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 10742 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6303 chr3R 25263233 25263300 + 27 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -42154 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_898 chr2L 14010581 14010646 + 27 NA promoter-TSS (FBgn0028909) tRNA-promoter-TSS (FBgn0028909) 23 FBgn0028909 FBgn0028909 FBtr0080609 tRNA:Q:34E tRNA Nup98-S2-pascual-garcia2017_R1_peak_1086 chr2L 15467937 15468004 + 27 NA Intergenic Intergenic 10299 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6549 chr3RHet 603034 603088 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6591 chr3RHet 2380439 2380493 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6192 chr3R 24182574 24182654 + 27 NA Intergenic Intergenic 4650 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6937 chrUextra 17201025 17201087 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6538 chr3R 27853298 27853358 + 27 NA Intergenic Intergenic -10767 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1600 chr2L 21080660 21080821 + 27 NA TTS (FBgn0053511) protein_coding-TTS (FBgn0053511) 1754 FBgn0053511 FBgn0053511 FBtr0091451 CG33511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4400 chr3L 20020159 20020216 + 27 NA TTS (FBgn0036932) protein_coding-TTS (FBgn0036932) 748 FBgn0036931 FBgn0036931 FBtr0074907 CG14183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7225 chrX 17001585 17001651 + 27 NA promoter-TSS (FBgn0260748) protein_coding-promoter-TSS (FBgn0260748) -1736 FBgn0065032 FBgn0065032 FBtr0113478 Arpc3B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2526 chr2R 10548668 10548722 + 27 NA Intergenic Intergenic -2435 FBgn0033952 FBgn0033952 FBtr0087482 Adgf-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7131 chrX 9839092 9839146 + 27 NA Intergenic Intergenic -14107 FBgn0026415 FBgn0026415 FBtr0071394 Idgf4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6682 chrU 40996 41050 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5752 chr3R 16724752 16724806 + 27 NA Intergenic Intergenic -1737 FBgn0038839 FBgn0038839 FBtr0083986 CG10830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_651 chr2L 9818365 9818419 + 27 NA intron (FBgn0032151, intron 5 of 13) protein_coding-intron (FBgn0032151, intron 4 of 13) -25285 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_298 chr2L 4428308 4428398 + 27 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -5555 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3732 chr3L 7397070 7397183 + 27 NA promoter-TSS (FBgn0035781) protein_coding-promoter-TSS (FBgn0035781) -77 FBgn0035781 FBgn0035781 FBtr0332725 CG8560 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4677 chr3R 1738325 1738450 + 27 NA intron (FBgn0083949, intron 1 of 16) protein_coding-intron (FBgn0083949, intron 1 of 16) 26858 FBgn0083949 FBgn0083949 FBtr0110807 CG34113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_943 chr2L 14411793 14411847 + 27 NA Intergenic Intergenic -2273 FBgn0004858 FBgn0004858 FBtr0080637 elB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_563 chr2L 8760934 8760988 + 27 NA Intergenic Intergenic 7747 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2760 chr2R 14384073 14384130 + 27 NA intron (FBgn0028496, intron 2 of 18) protein_coding-intron (FBgn0028496, intron 2 of 18) 1395 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5041 chr3R 7143591 7143653 + 27 NA Intergenic Intergenic -12292 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4747 chr3R 2685156 2685210 + 27 NA Intergenic Intergenic -4863 FBgn0001077 FBgn0001077 FBtr0081625 ftz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3745 chr3L 7657351 7657406 + 27 NA exon (FBgn0261788, exon 2 of 6) protein_coding-exon (FBgn0261788, exon 2 of 6) -9526 FBgn0035807 FBgn0035807 FBtr0076821 CG7492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1019 chr2L 14869549 14869603 + 27 NA TTS (FBgn0032553) protein_coding-TTS (FBgn0032553) 2446 FBgn0032553 FBgn0032553 FBtr0304004 CG4480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3242 chr2RHet 1453109 1453163 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6824 chrU 3231506 3231569 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3744 chr3L 7632791 7632857 + 27 NA promoter-TSS (FBgn0086074) snoRNA-promoter-TSS (FBgn0086074) 7 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6120 chr3R 23573198 23573252 + 27 NA exon (FBgn0005659, exon 5 of 5) protein_coding-exon (FBgn0005659, exon 5 of 5) 10963 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5958 chr3R 21858883 21858957 + 27 NA exon (FBgn0002632, exon 1 of 1) protein_coding-exon (FBgn0002632, exon 1 of 1) 287 FBgn0002632 FBgn0002632 FBtr0084959 m6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3072 chr2R 20007610 20007664 + 27 NA exon (FBgn0034978, exon 3 of 7) protein_coding-exon (FBgn0034978, exon 3 of 7) 3342 FBgn0034978 FBgn0034978 FBtr0305506 CG3257 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4143 chr3L 15330735 15330789 + 27 NA exon (FBgn0036494, exon 1 of 1) protein_coding-exon (FBgn0036494, exon 1 of 1) 970 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2462 chr2R 9382365 9382425 + 27 NA promoter-TSS (FBgn0033844) protein_coding-promoter-TSS (FBgn0033844) -28 FBgn0033844 FBgn0033844 FBtr0332927 bbc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2155 chr2R 4696998 4697071 + 27 NA intron (FBgn0024189, intron 1 of 21) protein_coding-intron (FBgn0024189, intron 1 of 20) 11012 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4222 chr3L 16542744 16542801 + 27 NA Intergenic Intergenic -4044 FBgn0036638 FBgn0036638 FBtr0075400 CG13033 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2646 chr2R 12394108 12394162 + 27 NA intron (FBgn0011260, intron 2 of 14) protein_coding-intron (FBgn0011260, intron 2 of 14) -7201 FBgn0034133 FBgn0034133 FBtr0087126 CG7813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1197 chr2L 16666362 16666453 + 27 NA exon (FBgn0032593, exon 14 of 18) protein_coding-exon (FBgn0032593, exon 14 of 18) 9292 FBgn0259735 FBgn0259735 FBtr0300005 CG42389 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3431 chr3L 624739 624810 + 27 NA Intergenic Intergenic -2458 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_715 chr2L 11171479 11171534 + 27 NA promoter-TSS (FBgn0259822) protein_coding-promoter-TSS (FBgn0259822) 159 FBgn0014076 FBgn0014076 FBtr0080216 Vm32E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3250 chr2RHet 1704472 1704526 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2973 chr2R 18220840 18220894 + 27 NA TTS (FBgn0034720) protein_coding-TTS (FBgn0034720) 236 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_587 chr2L 8844683 8844775 + 27 NA Intergenic Intergenic -18047 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3139 chr2RHet 43859 43940 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5720 chr3R 16269329 16269387 + 27 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 1 of 19) 35371 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3518 chr3L 2412599 2412705 + 27 NA intron (FBgn0261551, intron 1 of 9) protein_coding-intron (FBgn0261551, intron 1 of 9) -5303 FBgn0261551 FBgn0261551 FBtr0302675 CG42669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5479 chr3R 13472083 13472172 + 27 NA promoter-TSS (FBgn0051579) tRNA-promoter-TSS (FBgn0051579) 37 FBgn0051579 FBgn0051579 FBtr0083474 tRNA:CR31579 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6643 chr4 961839 961893 + 27 NA intron (FBgn0019985, intron 3 of 5) protein_coding-intron (FBgn0019985, intron 3 of 8) 4421 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4007 chr3L 12936548 12936614 + 27 NA Intergenic Intergenic 11166 FBgn0036325 FBgn0036325 FBtr0075903 CG10752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6123 chr3R 23600809 23600863 + 27 NA intron (FBgn0085382, intron 11 of 11) protein_coding-intron (FBgn0085382, intron 11 of 11) 38574 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_773 chr2L 12126148 12126213 + 27 NA exon (FBgn0032414, exon 5 of 6) protein_coding-exon (FBgn0032414, exon 5 of 6) 7187 FBgn0032415 FBgn0032415 FBtr0080360 rho-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6056 chr3R 22855525 22855579 + 27 NA exon (FBgn0004842, exon 3 of 8) protein_coding-exon (FBgn0004842, exon 3 of 8) -3721 FBgn0039476 FBgn0039476 FBtr0085149 CG6271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_893 chr2L 13922776 13922856 + 27 NA exon (FBgn0028938, exon 2 of 3) protein_coding-exon (FBgn0028938, exon 2 of 3) 733 FBgn0028938 FBgn0028938 FBtr0302990 CG16886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4860 chr3R 4228034 4228088 + 27 NA intron (FBgn0263416, intron 3 of 15) protein_coding-intron (FBgn0263416, intron 3 of 15) -14137 FBgn0051462 FBgn0051462 FBtr0081851 CG31462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3354 chr2RHet 2244597 2244736 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2254 chr2R 6234661 6234715 + 27 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 4978 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_507 chr2L 8335805 8335918 + 27 NA Intergenic Intergenic -2426 FBgn0032023 FBgn0032023 FBtr0079604 CG14274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2412 chr2R 8781989 8782043 + 27 NA intron (FBgn0003975, intron 4 of 7) protein_coding-intron (FBgn0003975, intron 4 of 7) 10310 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_746 chr2L 11590321 11590375 + 27 NA TTS (FBgn0032367) protein_coding-TTS (FBgn0032367) 1330 FBgn0046212 FBgn0046212 FBtr0100526 CG15841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_638 chr2L 9552491 9552548 + 27 NA exon (FBgn0032129, exon 7 of 9) protein_coding-exon (FBgn0032129, exon 7 of 9) 6708 FBgn0032127 FBgn0032127 FBtr0273329 CG13114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3981 chr3L 12584113 12584169 + 27 NA intron (FBgn0015904, intron 3 of 4) protein_coding-intron (FBgn0015904, intron 3 of 4) 10369 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5991 chr3R 22179050 22179137 + 27 NA intron (FBgn0053970, intron 5 of 8) protein_coding-intron (FBgn0053970, intron 5 of 8) -2117 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6746 chrU 566777 566879 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4312 chr3L 17667262 17667338 + 27 NA intron (FBgn0085280, intron 2 of 3) protein_coding-intron (FBgn0085280, intron 2 of 3) 2404 FBgn0085280 FBgn0085280 FBtr0301012 CG34251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3830 chr3L 9568848 9568912 + 27 NA intron (FBgn0261555, intron 3 of 9) protein_coding-intron (FBgn0261555, intron 3 of 9) -22074 FBgn0036013 FBgn0036013 FBtr0076378 CG14177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_46 chr2L 886438 886492 + 27 NA Intergenic Intergenic -1324 FBgn0031292 FBgn0031292 FBtr0332181 CG15824 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1106 chr2L 15617982 15618036 + 27 NA TTS (FBgn0028947) protein_coding-TTS (FBgn0028947) 1007 FBgn0028947 FBgn0028947 FBtr0080753 CG11865 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5312 chr3R 11688717 11688788 + 27 NA exon (FBgn0051183, exon 4 of 8) protein_coding-exon (FBgn0051183, exon 4 of 8) 2834 FBgn0038377 FBgn0038377 FBtr0083186 CG9632 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1647 chr2L 21724400 21724490 + 27 NA intron (FBgn0051619, intron 16 of 19) protein_coding-intron (FBgn0051619, intron 15 of 18) 33021 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4197 chr3L 16165739 16165852 + 27 NA Intergenic Intergenic -1315 FBgn0053795 FBgn0053795 FBtr0091799 CG33795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_999 chr2L 14717846 14717907 + 27 NA Intergenic Intergenic 4099 FBgn0085194 FBgn0085194 FBtr0112356 CG34165 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2189 chr2R 5205302 5205356 + 27 NA exon (FBgn0033403, exon 3 of 4) protein_coding-exon (FBgn0033403, exon 3 of 4) -4722 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4855 chr3R 4160172 4160244 + 27 NA promoter-TSS (FBgn0003129) protein_coding-promoter-TSS (FBgn0003129) -694 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1204 chr2L 16861222 16861292 + 27 NA promoter-TSS (FBgn0264440) ncRNA-promoter-TSS (FBgn0264440) 232 FBgn0032615 FBgn0032615 FBtr0080923 CG6012 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2220 chr2R 5696883 5696937 + 27 NA Intergenic Intergenic -2540 FBgn0027589 FBgn0027589 FBtr0088495 CG1688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2902 chr2R 16874305 16874359 + 27 NA promoter-TSS (FBgn0034567) protein_coding-promoter-TSS (FBgn0034567) -332 FBgn0034567 FBgn0034567 FBtr0071553 CG15651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5537 chr3R 14182768 14182829 + 27 NA intron (FBgn0038606, intron 1 of 3) protein_coding-intron (FBgn0038606, intron 1 of 3) 3901 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5775 chr3R 17211618 17211692 + 27 NA Intergenic Intergenic -2950 FBgn0004862 FBgn0004862 FBtr0084087 bap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5271 chr3R 11249658 11249712 + 27 NA exon (FBgn0038339, exon 3 of 5) protein_coding-exon (FBgn0038339, exon 3 of 5) -6180 FBgn0262397 FBgn0262397 FBtr0304297 mir-2c pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1689 chr2L 21881382 21881443 + 27 NA Intergenic Intergenic -12815 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5522 chr3R 13953767 13953828 + 27 NA intron (FBgn0003499, intron 4 of 4) protein_coding-intron (FBgn0003499, intron 4 of 4) 19082 FBgn0051518 FBgn0051518 FBtr0083545 tRNA:CR31518 tRNA Nup98-S2-pascual-garcia2017_R1_peak_372 chr2L 5484461 5484515 + 27 NA Intergenic Intergenic 22847 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2861 chr2R 16121608 16121662 + 27 NA exon (FBgn0034484, exon 5 of 6) protein_coding-exon (FBgn0034484, exon 5 of 6) 1333 FBgn0011870 FBgn0011870 FBtr0086314 tRNA:G3:56EFb tRNA Nup98-S2-pascual-garcia2017_R1_peak_5617 chr3R 15241967 15242021 + 27 NA exon (FBgn0051221, exon 2 of 5) protein_coding-exon (FBgn0051221, exon 2 of 5) 3578 FBgn0051221 FBgn0051221 FBtr0330030 CG31221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2480 chr2R 9630416 9630482 + 27 NA intron (FBgn0000633, intron 11 of 12) protein_coding-intron (FBgn0000633, intron 11 of 12) -12400 FBgn0033866 FBgn0033866 FBtr0087628 CG6280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5039 chr3R 7114355 7114409 + 27 NA intron (FBgn0051386, intron 2 of 4) ncRNA-intron (FBgn0051386, intron 2 of 4) 16948 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5738 chr3R 16552182 16552338 + 27 NA Intergenic Intergenic -5093 FBgn0051205 FBgn0051205 FBtr0300451 CG31205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1973 chr2R 1219933 1219987 + 27 NA Intergenic Intergenic 8536 FBgn0033017 FBgn0033017 FBtr0086094 CG10465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_141 chr2L 1643741 1643867 + 27 NA Intergenic Intergenic -7454 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1310 chr2L 17803035 17803129 + 27 NA exon (FBgn0262018, exon 7 of 14) protein_coding-exon (FBgn0262018, exon 7 of 14) 9590 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_813 chr2L 12673042 12673102 + 27 NA exon (FBgn0004394, exon 3 of 5) protein_coding-exon (FBgn0004394, exon 3 of 5) -3358 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2404 chr2R 8667391 8667445 + 27 NA promoter-TSS (FBgn0003326) protein_coding-promoter-TSS (FBgn0003326) -631 FBgn0003326 FBgn0003326 FBtr0087855 sca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3306 chr2RHet 1946512 1946660 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1788 chr2L 22342355 22342409 + 27 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) 1760 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5269 chr3R 11219083 11219243 + 27 NA exon (FBgn0262483, exon 12 of 14) protein_coding-exon (FBgn0262483, exon 12 of 14) -10490 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5459 chr3R 13317997 13318087 + 27 NA intron (FBgn0261046, intron 6 of 34) protein_coding-intron (FBgn0261046, intron 7 of 34) 13347 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2051 chr2R 3197385 3197495 + 27 NA Intergenic Intergenic -1473 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3166 chr2RHet 401156 401210 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_337 chr2L 4874116 4874185 + 27 NA exon (FBgn0051660, exon 13 of 14) protein_coding-exon (FBgn0051660, exon 13 of 14) 8963 FBgn0000286 FBgn0000286 FBtr0089648 Cf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4074 chr3L 14100150 14100204 + 27 NA exon (FBgn0036411, exon 2 of 3) protein_coding-exon (FBgn0036411, exon 2 of 3) 1041 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5182 chr3R 9400867 9400933 + 27 NA exon (FBgn0264430, exon 1 of 1) ncRNA-exon (FBgn0264430, exon 1 of 1) 353 FBgn0264430 FBgn0264430 FBtr0332550 CR43848 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6800 chrU 2334546 2334600 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6064 chr3R 23001825 23001883 + 27 NA intron (FBgn0004197, intron 12 of 14) protein_coding-intron (FBgn0004197, intron 12 of 14) 10414 FBgn0003482 FBgn0003482 FBtr0085116 spn-D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_487 chr2L 7911298 7911367 + 27 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -20738 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5270 chr3R 11230910 11230964 + 27 NA exon (FBgn0038337, exon 2 of 6) protein_coding-exon (FBgn0038337, exon 2 of 6) 290 FBgn0038337 FBgn0038337 FBtr0083106 CG6125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4151 chr3L 15401954 15402008 + 27 NA TTS (FBgn0036495) protein_coding-TTS (FBgn0036495) 1049 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2777 chr2R 14797593 14797647 + 27 NA exon (FBgn0028669, exon 1 of 1) protein_coding-exon (FBgn0028669, exon 1 of 1) 1599 FBgn0028669 FBgn0028669 FBtr0086602 Vha100-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6792 chrU 1974810 1974871 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1519 chr2L 20248007 20248061 + 27 NA promoter-TSS (FBgn0259996) protein_coding-promoter-TSS (FBgn0259996) -189 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4301 chr3L 17583716 17583811 + 27 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -24501 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2590 chr2R 11545363 11545418 + 27 NA TTS (FBgn0262403) pre_miRNA-TTS (FBgn0262403) 763 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4104 chr3L 14475717 14475771 + 27 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) -35181 FBgn0036426 FBgn0036426 FBtr0290282 CG9592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1711 chr2L 21975118 21975172 + 27 NA Intergenic Intergenic 17788 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2554 chr2R 10921041 10921115 + 27 NA intron (FBgn0029082, intron 1 of 11) protein_coding-intron (FBgn0029082, intron 1 of 11) -8734 FBgn0043530 FBgn0043530 FBtr0087420 Obp51a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_710 chr2L 11081456 11081536 + 27 NA promoter-TSS (FBgn0032336) protein_coding-promoter-TSS (FBgn0032336) -94 FBgn0032336 FBgn0032336 FBtr0301761 Ast-C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4937 chr3R 5649892 5649946 + 27 NA promoter-TSS (FBgn0085331) protein_coding-promoter-TSS (FBgn0085331) -374 FBgn0085331 FBgn0085331 FBtr0301078 CG34302 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1412 chr2L 19083372 19083561 + 27 NA promoter-TSS (FBgn0002023) protein_coding-promoter-TSS (FBgn0002023) -4438 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2290 chr2R 6855130 6855186 + 27 NA Intergenic Intergenic -25952 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6982 chrX 1331762 1331844 + 27 NA exon (FBgn0259108, exon 6 of 8) protein_coding-exon (FBgn0259108, exon 6 of 8) -14933 FBgn0027796 FBgn0027796 FBtr0300224 Gr2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3521 chr3L 2523876 2523930 + 27 NA intron (FBgn0010905, intron 4 of 16) protein_coding-intron (FBgn0010905, intron 4 of 15) 3070 FBgn0260480 FBgn0260480 FBtr0072962 CG32295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4124 chr3L 14927266 14927355 + 27 NA intron (FBgn0259099, intron 2 of 10) protein_coding-intron (FBgn0259099, intron 2 of 10) 10121 FBgn0040809 FBgn0040809 FBtr0075674 CG13465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4537 chr3L 24182083 24182137 + 27 NA intron (FBgn0011288, intron 4 of 7) protein_coding-intron (FBgn0011288, intron 4 of 7) 114781 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5988 chr3R 22149944 22150030 + 27 NA TTS (FBgn0261833) protein_coding-TTS (FBgn0261833) 1010 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2232 chr2R 5842813 5842896 + 27 NA intron (FBgn0011656, intron 1 of 9) protein_coding-intron (FBgn0011656, intron 1 of 9) 3496 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7043 chrX 4260383 4260437 + 27 NA promoter-TSS (FBgn0029706) protein_coding-promoter-TSS (FBgn0029706) -42 FBgn0029706 FBgn0029706 FBtr0070652 CG3626 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1515 chr2L 20231300 20231360 + 27 NA Intergenic Intergenic -16893 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4825 chr3R 3776582 3776641 + 27 NA intron (FBgn0000504, intron 2 of 4) protein_coding-intron (FBgn0000504, intron 2 of 4) 16519 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4255 chr3L 17075731 17075788 + 27 NA intron (FBgn0260943, intron 8 of 14) protein_coding-intron (FBgn0260943, intron 8 of 14) 27046 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3866 chr3L 10590052 10590132 + 27 NA Intergenic Intergenic 26584 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5933 chr3R 21684339 21684414 + 27 NA Intergenic Intergenic 7000 FBgn0039379 FBgn0039379 FBtr0084907 CG5886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5585 chr3R 14761196 14761284 + 27 NA intron (FBgn0261262, intron 2 of 17) protein_coding-intron (FBgn0261262, intron 2 of 18) 6322 FBgn0261262 FBgn0261262 FBtr0304686 CG42613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3631 chr3L 5986119 5986203 + 27 NA Intergenic Intergenic -4147 FBgn0052406 FBgn0052406 FBtr0077037 CG32406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2259 chr2R 6258840 6258955 + 27 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 8717 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1244 chr2L 17133611 17133706 + 27 NA promoter-TSS (FBgn0032627) protein_coding-promoter-TSS (FBgn0032627) 40 FBgn0032627 FBgn0032627 FBtr0303301 beat-IIIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3587 chr3L 4481011 4481080 + 27 NA exon (FBgn0035551, exon 2 of 2) protein_coding-exon (FBgn0035551, exon 2 of 2) 762 FBgn0035551 FBgn0035551 FBtr0073306 CG7465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2988 chr2R 18512711 18512765 + 27 NA intron (FBgn0053143, intron 3 of 7) protein_coding-intron (FBgn0053143, intron 3 of 7) -2321 FBgn0053143 FBgn0053143 FBtr0071859 CG33143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_90 chr2L 1265218 1265272 + 27 NA intron (FBgn0041097, intron 1 of 11) protein_coding-intron (FBgn0041097, intron 1 of 11) 8819 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1941 chr2R 608033 608109 + 27 NA intron (FBgn0026401, intron 9 of 23) protein_coding-intron (FBgn0026401, intron 8 of 22) 8444 FBgn0026401 FBgn0026401 FBtr0111118 Nipped-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_646 chr2L 9746758 9746875 + 27 NA promoter-TSS (FBgn0028704) protein_coding-promoter-TSS (FBgn0028704) -333 FBgn0028704 FBgn0028704 FBtr0079928 Nckx30C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1275 chr2L 17358575 17358633 + 27 NA Intergenic Intergenic -3936 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1065 chr2L 15300753 15300909 + 27 NA Intergenic Intergenic 3023 FBgn0028852 FBgn0028852 FBtr0080733 CG15262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4668 chr3R 1630114 1630240 + 27 NA intron (FBgn0263353, intron 1 of 3) protein_coding-intron (FBgn0263353, intron 1 of 3) 2127 FBgn0263353 FBgn0263353 FBtr0113195 CG11000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3350 chr2RHet 2237656 2237710 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2408 chr2R 8714351 8714405 + 27 NA Intergenic Intergenic 15685 FBgn0033775 FBgn0033775 FBtr0087820 Cyp9h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5820 chr3R 18105084 18105138 + 27 NA intron (FBgn0051163, intron 7 of 18) protein_coding-intron (FBgn0051163, intron 7 of 18) -13537 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1498 chr2L 20050979 20051067 + 27 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 9952 FBgn0014127 FBgn0014127 FBtr0081349 barr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5679 chr3R 15901225 15901283 + 27 NA Intergenic Intergenic 6918 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4698 chr3R 2115044 2115105 + 27 NA exon (FBgn0037421, exon 1 of 1) protein_coding-exon (FBgn0037421, exon 1 of 1) 1485 FBgn0037421 FBgn0037421 FBtr0078604 CG15594 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6516 chr3R 27589654 27589716 + 27 NA exon (FBgn0003065, exon 2 of 2) protein_coding-exon (FBgn0003065, exon 2 of 2) 803 FBgn0003065 FBgn0003065 FBtr0085859 CG2150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3180 chr2RHet 527084 527146 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1328 chr2L 17946494 17946548 + 27 NA Intergenic Intergenic -16893 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2582 chr2R 11386157 11386211 + 27 NA promoter-TSS (FBgn0034023) protein_coding-promoter-TSS (FBgn0034023) -953 FBgn0034023 FBgn0034023 FBtr0273302 Ir52a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1196 chr2L 16665361 16665451 + 27 NA exon (FBgn0032593, exon 16 of 18) protein_coding-exon (FBgn0032593, exon 16 of 18) 8291 FBgn0259735 FBgn0259735 FBtr0300005 CG42389 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3824 chr3L 9292057 9292111 + 27 NA Intergenic Intergenic -36705 FBgn0035975 FBgn0035975 FBtr0076433 PGRP-LA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3841 chr3L 9970272 9970326 + 27 NA intron (FBgn0040823, intron 1 of 6) protein_coding-intron (FBgn0040823, intron 1 of 5) 2548 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6107 chr3R 23444749 23444828 + 27 NA intron (FBgn0039530, intron 2 of 10) protein_coding-intron (FBgn0039530, intron 2 of 10) 6943 FBgn0039529 FBgn0039529 FBtr0085200 CG5612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1069 chr2L 15354594 15354648 + 27 NA Intergenic Intergenic 7006 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4533 chr3L 24120500 24120609 + 27 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 53225 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1522 chr2L 20287470 20287524 + 27 NA Intergenic Intergenic -7210 FBgn0040996 FBgn0040996 FBtr0081351 CG12617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4010 chr3L 12989226 12989298 + 27 NA exon (FBgn0036329, exon 1 of 1) protein_coding-exon (FBgn0036329, exon 1 of 1) 1027 FBgn0036329 FBgn0036329 FBtr0075872 CG11262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4697 chr3R 2080844 2080931 + 27 NA promoter-TSS (FBgn0037415) protein_coding-promoter-TSS (FBgn0037415) -110 FBgn0037415 FBgn0037415 FBtr0078598 Osi8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3946 chr3L 12015148 12015206 + 27 NA intron (FBgn0041096, intron 4 of 6) protein_coding-intron (FBgn0041096, intron 4 of 7) -5724 FBgn0264726 FBgn0264726 FBtr0334107 CR43994 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3810 chr3L 9005249 9005303 + 27 NA TTS (FBgn0035956) protein_coding-TTS (FBgn0035956) -2338 FBgn0035955 FBgn0035955 FBtr0333909 CG5194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5908 chr3R 20619281 20619337 + 27 NA intron (FBgn0039225, intron 2 of 5) protein_coding-intron (FBgn0039225, intron 3 of 6) 1226 FBgn0039225 FBgn0039225 FBtr0084697 Ets96B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1340 chr2L 18038671 18038730 + 27 NA intron (FBgn0243486, intron 3 of 14) protein_coding-intron (FBgn0243486, intron 3 of 14) 26293 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3926 chr3L 11675020 11675146 + 27 NA promoter-TSS (FBgn0015828) protein_coding-promoter-TSS (FBgn0015828) -55 FBgn0015828 FBgn0015828 FBtr0076108 TfIIEalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5691 chr3R 16011124 16011178 + 27 NA Intergenic Intergenic 15993 FBgn0038774 FBgn0038774 FBtr0083866 CG5023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4758 chr3R 2774857 2774911 + 27 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 2 of 6) -16322 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4783 chr3R 3093426 3093480 + 27 NA exon (FBgn0028400, exon 3 of 5) protein_coding-exon (FBgn0028400, exon 3 of 5) 1670 FBgn0028400 FBgn0028400 FBtr0081578 Syt4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6113 chr3R 23478084 23478149 + 27 NA promoter-TSS (FBgn0027494) protein_coding-promoter-TSS (FBgn0027494) -366 FBgn0027494 FBgn0027494 FBtr0085194 RpS10a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4095 chr3L 14362235 14362289 + 27 NA TTS (FBgn0001085) protein_coding-TTS (FBgn0001085) 545 FBgn0036421 FBgn0036421 FBtr0113170 CG13481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5093 chr3R 8099941 8099995 + 27 NA TTS (FBgn0259975) protein_coding-TTS (FBgn0259975) 1120 FBgn0259975 FBgn0259975 FBtr0300319 Sfp87B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5044 chr3R 7161877 7162039 + 27 NA intron (FBgn0004595, intron 1 of 7) protein_coding-intron (FBgn0004595, intron 1 of 7) 3058 FBgn0004595 FBgn0004595 FBtr0304607 pros protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3198 chr2RHet 702636 702690 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7032 chrX 3617897 3617998 + 27 NA promoter-TSS (FBgn0086899) protein_coding-promoter-TSS (FBgn0086899) -4282 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1241 chr2L 17121024 17121117 + 27 NA Intergenic Intergenic 4891 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6171 chr3R 23996952 23997056 + 27 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 24402 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6018 chr3R 22466475 22466538 + 27 NA exon (FBgn0039444, exon 2 of 2) protein_coding-exon (FBgn0039444, exon 2 of 2) 758 FBgn0039444 FBgn0039444 FBtr0085035 TwdlD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6457 chr3R 26925917 26925988 + 27 NA exon (FBgn0039817, exon 5 of 10) protein_coding-exon (FBgn0039817, exon 5 of 10) 939 FBgn0039817 FBgn0039817 FBtr0290201 CG15553 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4656 chr3R 1348885 1348970 + 27 NA promoter-TSS (FBgn0264427) ncRNA-promoter-TSS (FBgn0264427) 119 FBgn0010399 FBgn0010399 FBtr0078763 Nmdar1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_883 chr2L 13714065 13714119 + 27 NA exon (FBgn0051814, exon 2 of 13) protein_coding-exon (FBgn0051814, exon 2 of 13) 3218 FBgn0051814 FBgn0051814 FBtr0080580 CG31814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5912 chr3R 20817758 20817812 + 27 NA intron (FBgn0039257, intron 2 of 7) protein_coding-intron (FBgn0039257, intron 1 of 6) 7679 FBgn0039257 FBgn0039257 FBtr0305667 tnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2811 chr2R 15512537 15512591 + 27 NA intron (FBgn0003435, intron 2 of 10) protein_coding-intron (FBgn0003435, intron 2 of 9) -10220 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1157 chr2L 16203929 16203983 + 27 NA Intergenic Intergenic -7503 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1761 chr2L 22197139 22197213 + 27 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 17089 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7120 chrX 9399474 9399528 + 27 NA intron (FBgn0263508, intron 1 of 1) ncRNA-intron (FBgn0263508, intron 1 of 1) 1032 FBgn0263508 FBgn0263508 FBtr0309529 CR43497 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2857 chr2R 16096766 16096826 + 27 NA Intergenic Intergenic 3328 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4131 chr3L 15047135 15047189 + 27 NA promoter-TSS (FBgn0036470) protein_coding-promoter-TSS (FBgn0036470) 73 FBgn0036469 FBgn0036469 FBtr0075663 CG18649 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1239 chr2L 17099583 17099660 + 27 NA Intergenic Intergenic 11980 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2100 chr2R 3920636 3920690 + 27 NA intron (FBgn0025360, intron 1 of 3) protein_coding-intron (FBgn0025360, intron 1 of 3) 1874 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3891 chr3L 10718219 10718294 + 27 NA Intergenic Intergenic -28279 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3930 chr3L 11704458 11704512 + 27 NA promoter-TSS (FBgn0036198) protein_coding-promoter-TSS (FBgn0036198) 1 FBgn0036198 FBgn0036198 FBtr0076123 crim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6089 chr3R 23249406 23249494 + 27 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 13754 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2946 chr2R 17649332 17649386 + 27 NA Intergenic Intergenic 2140 FBgn0264715 FBgn0264715 FBtr0334050 CR43983 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4075 chr3L 14101310 14101403 + 27 NA promoter-TSS (FBgn0036411) protein_coding-promoter-TSS (FBgn0036411) -138 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5340 chr3R 11953780 11953848 + 27 NA promoter-TSS (FBgn0003319) protein_coding-promoter-TSS (FBgn0003319) -637 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4161 chr3L 15635178 15635298 + 27 NA intron (FBgn0259236, intron 1 of 1) protein_coding-intron (FBgn0259236, intron 1 of 1) -6433 FBgn0262529 FBgn0262529 FBtr0304969 CG43083 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7132 chrX 9949104 9949158 + 27 NA TTS (FBgn0030174) protein_coding-TTS (FBgn0030174) 1246 FBgn0004045 FBgn0004045 FBtr0071419 Yp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6768 chrU 1280603 1280715 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3609 chr3L 5374892 5374946 + 27 NA exon (FBgn0035604, exon 2 of 8) protein_coding-exon (FBgn0035604, exon 2 of 8) 1002 FBgn0035604 FBgn0035604 FBtr0077153 Ir64a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_800 chr2L 12605867 12605921 + 27 NA intron (FBgn0085424, intron 2 of 5) protein_coding-intron (FBgn0085424, intron 2 of 5) -12454 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3724 chr3L 7277716 7277770 + 27 NA exon (FBgn0035756, exon 4 of 13) protein_coding-exon (FBgn0035756, exon 4 of 13) -20723 FBgn0035755 FBgn0035755 FBtr0309299 CG14830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3099 chr2R 20476876 20476930 + 27 NA exon (FBgn0020521, exon 4 of 9) protein_coding-exon (FBgn0020521, exon 4 of 9) 8117 FBgn0020521 FBgn0020521 FBtr0301502 pio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2736 chr2R 14084292 14084375 + 27 NA Intergenic Intergenic -3977 FBgn0053958 FBgn0053958 FBtr0099994 CG33958 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5568 chr3R 14454176 14454281 + 27 NA promoter-TSS (FBgn0051228) tRNA-promoter-TSS (FBgn0051228) 32 FBgn0051228 FBgn0051228 FBtr0083693 tRNA:CR31228 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6122 chr3R 23598148 23598202 + 27 NA intron (FBgn0085382, intron 11 of 11) protein_coding-intron (FBgn0085382, intron 11 of 11) 35913 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1956 chr2R 835413 835499 + 27 NA Intergenic Intergenic -1716 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2610 chr2R 11940876 11940930 + 27 NA intron (FBgn0034071, intron 10 of 12) protein_coding-intron (FBgn0034071, intron 10 of 12) 5726 FBgn0034071 FBgn0034071 FBtr0087210 CG8405 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3224 chr2RHet 1294800 1294895 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2647 chr2R 12403603 12403657 + 27 NA promoter-TSS (FBgn0011260) protein_coding-promoter-TSS (FBgn0011260) -930 FBgn0011260 FBgn0011260 FBtr0087091 Sema-2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6039 chr3R 22578035 22578114 + 27 NA Intergenic Intergenic 14726 FBgn0039454 FBgn0039454 FBtr0085043 CG14247 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5856 chr3R 18958813 18958921 + 27 NA exon (FBgn0004644, exon 2 of 3) protein_coding-exon (FBgn0004644, exon 2 of 3) -5161 FBgn0051457 FBgn0051457 FBtr0084405 CG31457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7000 chrX 1596200 1596274 + 27 NA Intergenic Intergenic -6315 FBgn0023130 FBgn0023130 FBtr0333116 a6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1575 chr2L 20723823 20724025 + 27 NA TTS (FBgn0032878) protein_coding-TTS (FBgn0032878) 2627 FBgn0032878 FBgn0032878 FBtr0081396 CG9316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4535 chr3L 24156754 24156808 + 27 NA intron (FBgn0011288, intron 4 of 6) protein_coding-intron (FBgn0011288, intron 4 of 7) 89452 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1904 chr2LHet 192609 192666 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3076 chr2R 20094100 20094154 + 27 NA exon (FBgn0034990, exon 1 of 4) protein_coding-exon (FBgn0034990, exon 1 of 4) 319 FBgn0034990 FBgn0034990 FBtr0072276 CG11406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6398 chr3R 26233534 26233588 + 27 NA Intergenic Intergenic 15132 FBgn0261704 FBgn0261704 FBtr0303202 CG42740 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4921 chr3R 5147694 5147758 + 27 NA exon (FBgn0037675, exon 1 of 1) protein_coding-exon (FBgn0037675, exon 1 of 1) 234 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1581 chr2L 20782262 20782338 + 27 NA exon (FBgn0000251, exon 2 of 2) protein_coding-exon (FBgn0000251, exon 2 of 2) -5349 FBgn0032884 FBgn0032884 FBtr0081414 Pomp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6586 chr3RHet 2099040 2099165 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4323 chr3L 17885599 17885708 + 27 NA exon (FBgn0036769, exon 6 of 7) protein_coding-exon (FBgn0036769, exon 6 of 7) 3309 FBgn0036769 FBgn0036769 FBtr0075155 Tsp74F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1999 chr2R 1950688 1950742 + 27 NA intron (FBgn0033058, intron 2 of 6) protein_coding-intron (FBgn0033058, intron 2 of 7) -3652 FBgn0033056 FBgn0033056 FBtr0086024 CG7856 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3986 chr3L 12592776 12592830 + 27 NA Intergenic Intergenic -9928 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6199 chr3R 24228537 24228600 + 27 NA Intergenic Intergenic -15362 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3116 chr2R 20742358 20742450 + 27 NA Intergenic Intergenic 5905 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_790 chr2L 12366303 12366393 + 27 NA promoter-TSS (FBgn0262475) protein_coding-promoter-TSS (FBgn0262475) 9907 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4715 chr3R 2348478 2348535 + 27 NA Intergenic Intergenic -4745 FBgn0037449 FBgn0037449 FBtr0081675 CG15185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3719 chr3L 7192411 7192470 + 27 NA Intergenic Intergenic -9423 FBgn0263218 FBgn0263218 FBtr0299546 Dscam2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6740 chrU 376612 376674 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3245 chr2RHet 1550456 1550515 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2754 chr2R 14357333 14357464 + 27 NA exon (FBgn0028496, exon 9 of 19) protein_coding-exon (FBgn0028496, exon 9 of 19) -15431 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_481 chr2L 7613472 7613526 + 27 NA exon (FBgn0031926, exon 2 of 6) protein_coding-exon (FBgn0031926, exon 2 of 6) 5109 FBgn0031926 FBgn0031926 FBtr0079472 CG6739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5538 chr3R 14183636 14183700 + 27 NA intron (FBgn0038606, intron 1 of 3) protein_coding-intron (FBgn0038606, intron 1 of 3) 3031 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4714 chr3R 2344495 2344553 + 27 NA Intergenic Intergenic -8727 FBgn0037449 FBgn0037449 FBtr0081675 CG15185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1785 chr2L 22340580 22340703 + 27 NA promoter-TSS (FBgn0263091) pseudogene-promoter-TSS (FBgn0263091) 19 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4320 chr3L 17769288 17769357 + 27 NA Intergenic Intergenic -12064 FBgn0043025 FBgn0043025 FBtr0075192 Msi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_792 chr2L 12376806 12376861 + 27 NA intron (FBgn0262475, intron 2 of 6) protein_coding-intron (FBgn0262475, intron 5 of 9) 20392 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4472 chr3L 23346450 23346504 + 27 NA Intergenic Intergenic 14051 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3230 chr2RHet 1305989 1306043 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3401 chr3L 282099 282224 + 27 NA exon (FBgn0264707, exon 5 of 16) protein_coding-exon (FBgn0264707, exon 5 of 16) 4724 FBgn0264707 FBgn0264707 FBtr0333957 RhoGEF3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3988 chr3L 12608162 12608282 + 27 NA intron (FBgn0015919, intron 1 of 4) protein_coding-intron (FBgn0015919, intron 1 of 4) 5491 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_799 chr2L 12605328 12605393 + 27 NA intron (FBgn0085424, intron 2 of 5) protein_coding-intron (FBgn0085424, intron 2 of 5) -12988 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5445 chr3R 13180327 13180381 + 27 NA intron (FBgn0038498, intron 1 of 6) protein_coding-intron (FBgn0038498, intron 1 of 6) 11485 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6350 chr3R 25532381 25532479 + 27 NA Intergenic Intergenic -7831 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_966 chr2L 14539306 14539369 + 27 NA Intergenic Intergenic -8413 FBgn0011866 FBgn0011866 FBtr0080663 tRNA:G3:35Be tRNA Nup98-S2-pascual-garcia2017_R1_peak_5677 chr3R 15897166 15897259 + 27 NA Intergenic Intergenic 10960 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6626 chr4 725164 725237 + 27 NA promoter-TSS (FBgn0005558) protein_coding-promoter-TSS (FBgn0005558) -503 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4565 chr3LHet 1149727 1149782 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_720 chr2L 11252991 11253045 + 27 NA intron (FBgn0264442, intron 5 of 6) protein_coding-intron (FBgn0264442, intron 7 of 8) 15984 FBgn0040232 FBgn0040232 FBtr0332205 cmet protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1190 chr2L 16554884 16554997 + 27 NA intron (FBgn0259735, intron 1 of 4) protein_coding-intron (FBgn0259735, intron 1 of 2) -4981 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3208 chr2RHet 790607 790690 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1048 chr2L 15138419 15138489 + 27 NA Intergenic Intergenic -6065 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_1940 chr2R 595191 595250 + 27 NA intron (FBgn0026401, intron 12 of 23) protein_coding-intron (FBgn0026401, intron 11 of 22) 21295 FBgn0026401 FBgn0026401 FBtr0111118 Nipped-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_731 chr2L 11427980 11428062 + 27 NA Intergenic Intergenic 17582 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2379 chr2R 8093820 8093949 + 27 NA Intergenic Intergenic 4846 FBgn0020377 FBgn0020377 FBtr0303037 Sr-CII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6596 chr4 111812 111866 + 27 NA promoter-TSS (FBgn0085432) protein_coding-promoter-TSS (FBgn0085432) 21552 FBgn0085432 FBgn0085432 FBtr0112657 pan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5152 chr3R 8868265 8868319 + 27 NA promoter-TSS (FBgn0003450) protein_coding-promoter-TSS (FBgn0003450) 200 FBgn0003450 FBgn0003450 FBtr0082716 snk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1377 chr2L 18483929 18484035 + 27 NA exon (FBgn0032681, exon 1 of 9) protein_coding-exon (FBgn0032681, exon 1 of 9) 531 FBgn0032681 FBgn0032681 FBtr0300676 CG10283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2005 chr2R 2049695 2049749 + 27 NA promoter-TSS (FBgn0011932) tRNA-promoter-TSS (FBgn0011932) 20 FBgn0011932 FBgn0011932 FBtr0085981 tRNA:N5:42Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_4681 chr3R 1873971 1874025 + 27 NA Intergenic Intergenic 9261 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1932 chr2R 388295 388349 + 27 NA Intergenic Intergenic -9181 FBgn0050260 FBgn0050260 FBtr0100840 tRNA:CR30260 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2709 chr2R 13579461 13579515 + 27 NA exon (FBgn0034262, exon 3 of 5) protein_coding-exon (FBgn0034262, exon 3 of 5) 3368 FBgn0034262 FBgn0034262 FBtr0086889 swi2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_599 chr2L 8874208 8874262 + 27 NA Intergenic Intergenic 7468 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6767 chrU 1257387 1257441 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4824 chr3R 3770400 3770490 + 27 NA intron (FBgn0000504, intron 2 of 4) protein_coding-intron (FBgn0000504, intron 2 of 4) 22685 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2001 chr2R 2038751 2038838 + 27 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) 1387 FBgn0011938 FBgn0011938 FBtr0086016 tRNA:N5:42Ah tRNA Nup98-S2-pascual-garcia2017_R1_peak_4402 chr3L 20067392 20067491 + 27 NA exon (FBgn0036934, exon 2 of 3) protein_coding-exon (FBgn0036934, exon 2 of 3) 14666 FBgn0036934 FBgn0036934 FBtr0074871 sNPF-R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_323 chr2L 4684538 4684641 + 27 NA promoter-TSS (FBgn0000227) protein_coding-promoter-TSS (FBgn0000227) -130 FBgn0000227 FBgn0000227 FBtr0077423 Bsg25A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5179 chr3R 9351887 9351959 + 27 NA Intergenic Intergenic -2666 FBgn0038157 FBgn0038157 FBtr0082791 CG12538 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7109 chrX 8647900 8647954 + 27 NA Intergenic Intergenic 29220 FBgn0262989 FBgn0262989 FBtr0306827 CR43297 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_312 chr2L 4518883 4518942 + 27 NA exon (FBgn0053196, exon 37 of 47) protein_coding-exon (FBgn0053196, exon 37 of 47) -41888 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3537 chr3L 3018312 3018366 + 27 NA Intergenic Intergenic -1083 FBgn0052487 FBgn0052487 FBtr0073007 CG32487 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2515 chr2R 10326373 10326439 + 27 NA intron (FBgn0261613, intron 1 of 5) protein_coding-intron (FBgn0261613, intron 1 of 5) 3002 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5281 chr3R 11352316 11352370 + 27 NA Intergenic Intergenic 4852 FBgn0051296 FBgn0051296 FBtr0083155 CG31296 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3505 chr3L 2032581 2032640 + 27 NA Intergenic Intergenic 5614 FBgn0259701 FBgn0259701 FBtr0309792 CG42355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5112 chr3R 8371803 8371886 + 27 NA intron (FBgn0250910, intron 2 of 7) protein_coding-intron (FBgn0250910, intron 2 of 9) 2107 FBgn0250910 FBgn0250910 FBtr0308597 Octbeta3R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2302 chr2R 7216701 7216799 + 27 NA exon (FBgn0003382, exon 2 of 9) protein_coding-exon (FBgn0003382, exon 2 of 9) 3457 FBgn0003382 FBgn0003382 FBtr0332463 sha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7170 chrX 12820238 12820349 + 27 NA intron (FBgn0086675, intron 2 of 6) protein_coding-intron (FBgn0086675, intron 2 of 7) -12257 FBgn0086675 FBgn0086675 FBtr0333319 fne protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5554 chr3R 14348480 14348534 + 27 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 22801 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3301 chr2RHet 1934439 1934496 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5380 chr3R 12382628 12382696 + 27 NA intron (FBgn0259244, intron 9 of 12) protein_coding-intron (FBgn0259244, intron 9 of 16) -14575 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_460 chr2L 7118998 7119054 + 27 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) 14501 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5609 chr3R 15097811 15097879 + 27 NA Intergenic Intergenic 14857 FBgn0038695 FBgn0038695 FBtr0083738 CG14280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2439 chr2R 9161339 9161393 + 27 NA exon (FBgn0052843, exon 6 of 11) protein_coding-exon (FBgn0052843, exon 6 of 11) 11376 FBgn0259219 FBgn0259219 FBtr0299738 CG42319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1431 chr2L 19299296 19299418 + 27 NA promoter-TSS (FBgn0032769) protein_coding-promoter-TSS (FBgn0032769) 494 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2469 chr2R 9506930 9507001 + 27 NA Intergenic Intergenic -3628 FBgn0000633 FBgn0000633 FBtr0087625 fas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1594 chr2L 21001558 21001642 + 27 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -32633 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5706 chr3R 16167732 16167827 + 27 NA exon (FBgn0038789, exon 4 of 8) protein_coding-exon (FBgn0038789, exon 4 of 8) 2790 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6462 chr3R 26968301 26968383 + 27 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 8228 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6646 chr4 988585 988639 + 27 NA intron (FBgn0039932, intron 2 of 4) protein_coding-intron (FBgn0039932, intron 2 of 4) 1388 FBgn0039932 FBgn0039932 FBtr0301336 CG11093 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1123 chr2L 15880438 15880530 + 27 NA promoter-TSS (FBgn0028935) protein_coding-promoter-TSS (FBgn0028935) -419 FBgn0028935 FBgn0028935 FBtr0306681 CG7653 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6541 chr3RHet 119813 119867 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5599 chr3R 14940592 14940701 + 27 NA intron (FBgn0038679, intron 2 of 7) protein_coding-intron (FBgn0038679, intron 2 of 7) -9076 FBgn0038679 FBgn0038679 FBtr0304715 CG6040 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5911 chr3R 20789727 20789796 + 27 NA Intergenic Intergenic 16407 FBgn0039255 FBgn0039255 FBtr0084751 CG13646 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2687 chr2R 13227487 13227623 + 27 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -32748 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4357 chr3L 18345612 18345688 + 27 NA Intergenic Intergenic 45885 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2210 chr2R 5508252 5508306 + 27 NA promoter-TSS (FBgn0262172) pre_miRNA-promoter-TSS (FBgn0262172) 509 FBgn0262385 FBgn0262385 FBtr0304246 mir-307a pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6811 chrU 2474102 2474184 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5989 chr3R 22168941 22169020 + 27 NA intron (FBgn0053970, intron 2 of 8) protein_coding-intron (FBgn0053970, intron 2 of 8) 2215 FBgn0039421 FBgn0039421 FBtr0085027 CG6036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3069 chr2R 19889623 19889691 + 27 NA exon (FBgn0053519, exon 22 of 35) protein_coding-exon (FBgn0053519, exon 22 of 35) -7084 FBgn0034951 FBgn0034951 FBtr0072201 CG3860 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1858 chr2L 22706931 22706985 + 27 NA Intergenic Intergenic -15950 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3774 chr3L 8381049 8381103 + 27 NA exon (FBgn0001253, exon 5 of 7) protein_coding-exon (FBgn0001253, exon 5 of 7) -3564 FBgn0035886 FBgn0035886 FBtr0076608 Jon66Ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1176 chr2L 16420895 16420958 + 27 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -3042 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6664 chr4 1112621 1112675 + 27 NA intron (FBgn0005561, intron 1 of 12) protein_coding-intron (FBgn0005561, intron 1 of 12) -6365 FBgn0005561 FBgn0005561 FBtr0301563 sv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2937 chr2R 17459661 17459753 + 27 NA promoter-TSS (FBgn0034636) protein_coding-promoter-TSS (FBgn0034636) 3833 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5741 chr3R 16574155 16574229 + 27 NA exon (FBgn0017557, exon 1 of 1) protein_coding-exon (FBgn0017557, exon 1 of 1) 604 FBgn0017557 FBgn0017557 FBtr0083928 Pros28.1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3022 chr2R 18979394 18979463 + 27 NA intron (FBgn0034821, intron 1 of 2) protein_coding-intron (FBgn0034821, intron 1 of 2) 2357 FBgn0034821 FBgn0034821 FBtr0071979 CG9876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6801 chrU 2349780 2349834 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_110 chr2L 1409602 1409758 + 27 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 10769 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6086 chr3R 23204094 23204228 + 27 NA intron (FBgn0016061, intron 16 of 16) protein_coding-intron (FBgn0016061, intron 16 of 16) -8574 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5043 chr3R 7154208 7154318 + 27 NA Intergenic Intergenic -4637 FBgn0004595 FBgn0004595 FBtr0304607 pros protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1552 chr2L 20550029 20550083 + 27 NA Intergenic Intergenic -12368 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3313 chr2RHet 1966644 1966698 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6446 chr3R 26825925 26825992 + 27 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) -7779 FBgn0051007 FBgn0051007 FBtr0085747 CG31007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6885 chrUextra 492781 492835 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6723 chrU 236084 236147 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3455 chr3L 1112219 1112345 + 27 NA Intergenic Intergenic -11193 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3053 chr2R 19589916 19590006 + 27 NA promoter-TSS (FBgn0013548) protein_coding-promoter-TSS (FBgn0013548) -41 FBgn0013548 FBgn0013548 FBtr0072085 l(2)dtl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_234 chr2L 3590952 3591030 + 27 NA promoter-TSS (FBgn0264371) ncRNA-promoter-TSS (FBgn0264371) -690 FBgn0264371 FBgn0264371 FBtr0332223 CR43823 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2592 chr2R 11553389 11553514 + 27 NA promoter-TSS (FBgn0023441) protein_coding-promoter-TSS (FBgn0023441) -852 FBgn0023441 FBgn0023441 FBtr0087347 fus protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1516 chr2L 20231688 20231799 + 27 NA Intergenic Intergenic -16480 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_527 chr2L 8567071 8567138 + 27 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -3784 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2856 chr2R 16090618 16090702 + 27 NA Intergenic Intergenic 9464 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3723 chr3L 7272283 7272354 + 27 NA exon (FBgn0035756, exon 6 of 13) protein_coding-exon (FBgn0035756, exon 6 of 13) -15298 FBgn0035755 FBgn0035755 FBtr0309299 CG14830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2096 chr2R 3915788 3915842 + 27 NA TTS (FBgn0263970) ncRNA-TTS (FBgn0263970) 1618 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_66 chr2L 1028329 1028383 + 27 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) -1466 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2746 chr2R 14186231 14186285 + 27 NA promoter-TSS (FBgn0034326) protein_coding-promoter-TSS (FBgn0034326) -564 FBgn0034326 FBgn0034326 FBtr0307185 CG18540 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6622 chr4 655600 655709 + 27 NA exon (FBgn0039915, exon 10 of 10) protein_coding-exon (FBgn0039915, exon 10 of 10) 5335 FBgn0039915 FBgn0039915 FBtr0089972 CG1732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7050 chrX 4768825 4768879 + 27 NA promoter-TSS (FBgn0029730) protein_coding-promoter-TSS (FBgn0029730) -437 FBgn0263506 FBgn0263506 FBtr0309526 CR43495 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3849 chr3L 10102881 10102957 + 27 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -8938 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3392 chr2RHet 3133692 3133754 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5064 chr3R 7532238 7532292 + 27 NA Intergenic Intergenic 2919 FBgn0025821 FBgn0025821 FBtr0082427 I-t protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4706 chr3R 2245628 2245702 + 27 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 13086 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5084 chr3R 7972037 7972128 + 27 NA intron (FBgn0037993, intron 3 of 6) protein_coding-intron (FBgn0037993, intron 3 of 6) 12235 FBgn0037993 FBgn0037993 FBtr0082549 dpr15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3870 chr3L 10598782 10598836 + 27 NA Intergenic Intergenic 17867 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1506 chr2L 20115318 20115372 + 27 NA Intergenic Intergenic -11255 FBgn0032851 FBgn0032851 FBtr0089388 CG13970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4897 chr3R 4788698 4788890 + 27 NA promoter-TSS (FBgn0037645) protein_coding-promoter-TSS (FBgn0037645) -111 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_550 chr2L 8660810 8660864 + 27 NA intron (FBgn0011259, intron 15 of 20) protein_coding-intron (FBgn0011259, intron 15 of 21) -12315 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4919 chr3R 5143572 5143626 + 27 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -3893 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4084 chr3L 14164081 14164166 + 27 NA Intergenic Intergenic 7597 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3628 chr3L 5933878 5933932 + 27 NA intron (FBgn0053993, intron 1 of 5) protein_coding-intron (FBgn0053993, intron 1 of 5) -5502 FBgn0053993 FBgn0053993 FBtr0301034 CG33993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2402 chr2R 8655816 8655883 + 27 NA Intergenic Intergenic 6232 FBgn0033774 FBgn0033774 FBtr0087854 CG12374 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_896 chr2L 14001959 14002013 + 27 NA promoter-TSS (FBgn0003255) protein_coding-promoter-TSS (FBgn0003255) -6141 FBgn0261582 FBgn0261582 FBtr0302893 CG42692 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4504 chr3L 23789536 23789635 + 27 NA Intergenic Intergenic 12254 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2785 chr2R 14947653 14947707 + 27 NA exon (FBgn0034416, exon 2 of 2) protein_coding-exon (FBgn0034416, exon 2 of 2) 754 FBgn0034416 FBgn0034416 FBtr0100137 CG15109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3382 chr2RHet 2444566 2444645 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_637 chr2L 9551270 9551330 + 27 NA promoter-TSS (FBgn0032129) protein_coding-promoter-TSS (FBgn0032129) 5489 FBgn0032127 FBgn0032127 FBtr0273329 CG13114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5734 chr3R 16517118 16517188 + 27 NA TTS (FBgn0024944) protein_coding-TTS (FBgn0024944) 13248 FBgn0263406 FBgn0263406 FBtr0309185 CR43452 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6426 chr3R 26734937 26735026 + 27 NA Intergenic Intergenic -3629 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2923 chr2R 17312903 17312985 + 27 NA intron (FBgn0010415, intron 2 of 6) protein_coding-intron (FBgn0010415, intron 2 of 5) -8375 FBgn0010415 FBgn0010415 FBtr0301557 Sdc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_379 chr2L 5601297 5601380 + 27 NA Intergenic Intergenic 4505 FBgn0031724 FBgn0031724 FBtr0079109 CG18266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1105 chr2L 15605636 15605716 + 27 NA Intergenic Intergenic 6293 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4271 chr3L 17242384 17242438 + 27 NA intron (FBgn0264462, intron 1 of 1) ncRNA-intron (FBgn0264462, intron 1 of 1) 3429 FBgn0264462 FBgn0264462 FBtr0332783 CR43870 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5322 chr3R 11777504 11777565 + 27 NA promoter-TSS (FBgn0051088) protein_coding-promoter-TSS (FBgn0051088) -869 FBgn0051088 FBgn0051088 FBtr0083241 CG31088 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_564 chr2L 8765988 8766061 + 27 NA exon (FBgn0032066, exon 5 of 5) protein_coding-exon (FBgn0032066, exon 5 of 5) 2684 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2165 chr2R 4851257 4851311 + 27 NA TTS (FBgn0011300) protein_coding-TTS (FBgn0011300) 4403 FBgn0033358 FBgn0033358 FBtr0088671 CG8216 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2188 chr2R 5201444 5201498 + 27 NA promoter-TSS (FBgn0262220) pre_miRNA-promoter-TSS (FBgn0262220) -864 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3548 chr3L 3260444 3260570 + 27 NA intron (FBgn0035427, intron 2 of 5) protein_coding-intron (FBgn0035427, intron 1 of 4) 2629 FBgn0035427 FBgn0035427 FBtr0073050 ckd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5365 chr3R 12239669 12239723 + 27 NA Intergenic Intergenic -10284 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3837 chr3L 9873333 9873387 + 27 NA exon (FBgn0085411, exon 2 of 4) protein_coding-exon (FBgn0085411, exon 2 of 4) 1275 FBgn0085411 FBgn0085411 FBtr0332687 CG34382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3969 chr3L 12425179 12425294 + 27 NA exon (FBgn0036285, exon 1 of 6) protein_coding-exon (FBgn0036285, exon 1 of 6) 532 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5018 chr3R 6811702 6811790 + 27 NA Intergenic Intergenic -7459 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_860 chr2L 13311572 13311626 + 27 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) -4844 FBgn0264301 FBgn0264301 FBtr0331506 CG43779 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6308 chr3R 25334382 25334473 + 27 NA Intergenic Intergenic -4908 FBgn0039668 FBgn0039668 FBtr0085431 Trc8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_986 chr2L 14626812 14626866 + 27 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 10570 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5648 chr3R 15561131 15561226 + 27 NA intron (FBgn0024963, intron 1 of 12) protein_coding-intron (FBgn0024963, intron 1 of 11) 4497 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2609 chr2R 11925816 11925947 + 27 NA exon (FBgn0034070, exon 2 of 15) protein_coding-exon (FBgn0034070, exon 2 of 15) 6416 FBgn0034070 FBgn0034070 FBtr0087209 SP2353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3945 chr3L 11943105 11943159 + 27 NA TTS (FBgn0036226) protein_coding-TTS (FBgn0036226) 193 FBgn0036227 FBgn0036227 FBtr0076042 CG17826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4028 chr3L 13273016 13273134 + 27 NA TTS (FBgn0023095) protein_coding-TTS (FBgn0023095) 199 FBgn0052123 FBgn0052123 FBtr0075835 tRNA:CR32123:Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6486 chr3R 27196034 27196096 + 27 NA exon (FBgn0085376, exon 17 of 17) protein_coding-exon (FBgn0085376, exon 17 of 17) -2084 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2375 chr2R 8019066 8019137 + 27 NA Intergenic Intergenic -7099 FBgn0033683 FBgn0033683 FBtr0087982 CG18343 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1209 chr2L 16877575 16877667 + 27 NA TTS (FBgn0052832) protein_coding-TTS (FBgn0052832) 1669 FBgn0052832 FBgn0052832 FBtr0080960 CG32832 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2180 chr2R 4958585 4958639 + 27 NA intron (FBgn0011746, intron 1 of 4) protein_coding-intron (FBgn0011746, intron 1 of 4) 2006 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4526 chr3L 24116941 24117013 + 27 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 49648 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4611 chr3R 681566 681677 + 27 NA intron (FBgn0003002, intron 1 of 2) protein_coding-intron (FBgn0003002, intron 1 of 2) 3086 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4378 chr3L 19035120 19035174 + 27 NA intron (FBgn0002945, intron 1 of 3) protein_coding-intron (FBgn0002945, intron 1 of 4) 3402 FBgn0002945 FBgn0002945 FBtr0332650 nkd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2651 chr2R 12443406 12443460 + 27 NA exon (FBgn0034135, exon 7 of 10) protein_coding-exon (FBgn0034135, exon 7 of 10) 3668 FBgn0034135 FBgn0034135 FBtr0087097 Syn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6221 chr3R 24408995 24409049 + 27 NA exon (FBgn0000659, exon 1 of 1) protein_coding-exon (FBgn0000659, exon 1 of 1) 1812 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6687 chrU 71761 71819 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7174 chrX 12927474 12927563 + 27 NA exon (FBgn0261379, exon 4 of 5) protein_coding-exon (FBgn0261379, exon 4 of 5) -2504 FBgn0261388 FBgn0261388 FBtr0302270 CG42629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1230 chr2L 17045890 17045958 + 27 NA Intergenic Intergenic 2357 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5038 chr3R 7105157 7105227 + 27 NA intron (FBgn0051386, intron 3 of 4) ncRNA-intron (FBgn0051386, intron 3 of 4) -23347 FBgn0262972 FBgn0262972 FBtr0306728 CR43283 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_133 chr2L 1588176 1588241 + 27 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) -1053 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2394 chr2R 8430014 8430068 + 27 NA intron (FBgn0011592, intron 1 of 9) protein_coding-intron (FBgn0011592, intron 1 of 9) -3153 FBgn0053752 FBgn0053752 FBtr0091753 CG33752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2360 chr2R 7760228 7760313 + 27 NA exon (FBgn0033661, exon 8 of 13) protein_coding-exon (FBgn0033661, exon 8 of 13) 5822 FBgn0260437 FBgn0260437 FBtr0300860 CR42532 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4749 chr3R 2704462 2704516 + 27 NA Intergenic Intergenic 14443 FBgn0001077 FBgn0001077 FBtr0081625 ftz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5422 chr3R 12754645 12754769 + 27 NA exon (FBgn0000015, exon 7 of 7) protein_coding-exon (FBgn0000015, exon 7 of 7) 2628 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3871 chr3L 10600996 10601081 + 27 NA Intergenic Intergenic 15638 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3223 chr2RHet 1292968 1293027 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6994 chrX 1492742 1492810 + 27 NA intron (FBgn0025390, intron 2 of 7) protein_coding-intron (FBgn0025390, intron 2 of 7) -13598 FBgn0000210 FBgn0000210 FBtr0303563 br protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6335 chr3R 25510434 25510496 + 27 NA TTS (FBgn0039682) protein_coding-TTS (FBgn0039682) 2240 FBgn0013972 FBgn0013972 FBtr0085453 Gycalpha99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5113 chr3R 8378797 8378852 + 27 NA exon (FBgn0038063, exon 6 of 6) protein_coding-exon (FBgn0038063, exon 6 of 6) -1551 FBgn0262383 FBgn0262383 FBtr0304231 mir-284 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_925 chr2L 14300983 14301046 + 27 NA promoter-TSS (FBgn0261563) protein_coding-promoter-TSS (FBgn0261563) -5620 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_861 chr2L 13320256 13320310 + 27 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) 10838 FBgn0264308 FBgn0264308 FBtr0331504 CG43778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6026 chr3R 22498635 22498701 + 27 NA intron (FBgn0250908, intron 1 of 8) protein_coding-intron (FBgn0250908, intron 1 of 8) 9020 FBgn0250908 FBgn0250908 FBtr0290328 beat-VII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3515 chr3L 2284449 2284504 + 27 NA intron (FBgn0264002, intron 1 of 3) protein_coding-intron (FBgn0264002, intron 1 of 3) 1593 FBgn0264002 FBgn0264002 FBtr0330358 DmsR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2589 chr2R 11542396 11542495 + 27 NA Intergenic Intergenic -2182 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4847 chr3R 4036602 4036656 + 27 NA Intergenic Intergenic -6077 FBgn0261290 FBgn0261290 FBtr0091780 CheA84a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3048 chr2R 19539941 19539995 + 27 NA intron (FBgn0004795, intron 9 of 11) protein_coding-intron (FBgn0004795, intron 9 of 11) -5126 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6652 chr4 1014712 1014799 + 27 NA intron (FBgn0019650, intron 2 of 8) protein_coding-intron (FBgn0019650, intron 2 of 8) 4404 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3249 chr2RHet 1681234 1681288 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4839 chr3R 3975030 3975084 + 27 NA exon (FBgn0001138, exon 8 of 9) protein_coding-exon (FBgn0001138, exon 8 of 9) -8293 FBgn0011959 FBgn0011959 FBtr0081809 tRNA:R2:84Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_2262 chr2R 6271333 6271428 + 27 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) -3766 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4982 chr3R 6390366 6390420 + 27 NA intron (FBgn0001235, intron 5 of 12) protein_coding-intron (FBgn0001235, intron 5 of 11) 40999 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3346 chr2RHet 2202043 2202098 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3801 chr3L 8893473 8893576 + 27 NA exon (FBgn0035934, exon 6 of 17) protein_coding-exon (FBgn0035934, exon 6 of 17) -2925 FBgn0052034 FBgn0052034 FBtr0076505 tRNA:CR32034 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3298 chr2RHet 1930139 1930201 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6234 chr3R 24571285 24571347 + 27 NA promoter-TSS (FBgn0039595) protein_coding-promoter-TSS (FBgn0039595) -831 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3191 chr2RHet 604911 604982 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4263 chr3L 17152859 17152913 + 27 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -7077 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2770 chr2R 14648284 14648338 + 27 NA promoter-TSS (FBgn0034389) protein_coding-promoter-TSS (FBgn0034389) 276 FBgn0259682 FBgn0259682 FBtr0299942 CG42351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1906 chr2LHet 193816 193935 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5709 chr3R 16173990 16174057 + 27 NA Intergenic Intergenic 9034 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_627 chr2L 9297812 9297880 + 27 NA Intergenic Intergenic 7161 FBgn0262033 FBgn0262033 FBtr0303929 CG42844 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_378 chr2L 5588498 5588579 + 27 NA promoter-TSS (FBgn0031723) protein_coding-promoter-TSS (FBgn0031723) -124 FBgn0031723 FBgn0031723 FBtr0079117 CG7251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2859 chr2R 16108562 16108616 + 27 NA Intergenic Intergenic -8397 FBgn0011869 FBgn0011869 FBtr0086312 tRNA:G3:56EFa tRNA Nup98-S2-pascual-garcia2017_R1_peak_5476 chr3R 13450515 13450569 + 27 NA promoter-TSS (FBgn0038530) protein_coding-promoter-TSS (FBgn0038530) 59 FBgn0011994 FBgn0011994 FBtr0083496 tRNA:T:90Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_732 chr2L 11437827 11437881 + 27 NA exon (FBgn0261648, exon 2 of 4) protein_coding-exon (FBgn0261648, exon 2 of 4) 7749 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6709 chrU 172435 172489 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4051 chr3L 13705555 13705609 + 27 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 90918 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1098 chr2L 15550081 15550193 + 27 NA promoter-TSS (FBgn0028880) protein_coding-promoter-TSS (FBgn0028880) -273 FBgn0028880 FBgn0028880 FBtr0300847 CG15256 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_718 chr2L 11220376 11220430 + 27 NA intron (FBgn0264442, intron 1 of 6) protein_coding-intron (FBgn0264442, intron 2 of 8) -14311 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_433 chr2L 6578697 6578772 + 27 NA intron (FBgn0031835, intron 5 of 15) protein_coding-intron (FBgn0031835, intron 5 of 15) -12147 FBgn0031834 FBgn0031834 FBtr0079330 CG13766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4619 chr3R 767290 767362 + 27 NA exon (FBgn0051536, exon 11 of 13) protein_coding-exon (FBgn0051536, exon 11 of 13) 6492 FBgn0004183 FBgn0004183 FBtr0078851 snRNA:U1:82Eb snRNA Nup98-S2-pascual-garcia2017_R1_peak_5693 chr3R 16012406 16012484 + 27 NA Intergenic Intergenic 17287 FBgn0038774 FBgn0038774 FBtr0083866 CG5023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6942 chrUextra 18485303 18485386 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6651 chr4 1010975 1011038 + 27 NA exon (FBgn0019650, exon 1 of 9) protein_coding-exon (FBgn0019650, exon 1 of 9) 655 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4491 chr3L 23659355 23659427 + 27 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -49000 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1046 chr2L 15102572 15102661 + 27 NA Intergenic Intergenic -6789 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_940 chr2L 14382187 14382241 + 27 NA Intergenic Intergenic -1044 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4391 chr3L 19510858 19510912 + 27 NA exon (FBgn0036878, exon 1 of 1) protein_coding-exon (FBgn0036878, exon 1 of 1) 547 FBgn0036878 FBgn0036878 FBtr0074977 Cpr76Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6702 chrU 134102 134157 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1958 chr2R 836191 836251 + 27 NA promoter-TSS (FBgn0040849) protein_coding-promoter-TSS (FBgn0040849) -951 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3231 chr2RHet 1306519 1306611 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6936 chrUextra 17200800 17200854 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4630 chr3R 963920 964009 + 27 NA promoter-TSS (FBgn0040684) protein_coding-promoter-TSS (FBgn0040684) -669 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2390 chr2R 8302036 8302090 + 27 NA exon (FBgn0033731, exon 2 of 2) protein_coding-exon (FBgn0033731, exon 2 of 2) 596 FBgn0033731 FBgn0033731 FBtr0087924 Cpr49Ah protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2725 chr2R 13895240 13895327 + 27 NA promoter-TSS (FBgn0034286) protein_coding-promoter-TSS (FBgn0034286) 87 FBgn0034286 FBgn0034286 FBtr0300215 dpr13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_546 chr2L 8647216 8647275 + 27 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -25907 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2971 chr2R 18191557 18191611 + 27 NA intron (FBgn0034718, intron 1 of 1) protein_coding-intron (FBgn0034718, intron 2 of 2) 5871 FBgn0034718 FBgn0034718 FBtr0071852 wdp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_222 chr2L 3354910 3354977 + 27 NA promoter-TSS (FBgn0020445) protein_coding-promoter-TSS (FBgn0020445) 57 FBgn0020445 FBgn0020445 FBtr0089980 E23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4705 chr3R 2242453 2242521 + 27 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 9908 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1419 chr2L 19175241 19175295 + 27 NA exon (FBgn0010300, exon 3 of 3) protein_coding-exon (FBgn0010300, exon 3 of 3) 6434 FBgn0032763 FBgn0032763 FBtr0081233 CG17568 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5392 chr3R 12547285 12547339 + 27 NA intron (FBgn0003944, intron 1 of 2) protein_coding-intron (FBgn0003944, intron 1 of 2) 13036 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1658 chr2L 21768631 21768858 + 27 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 10734 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4575 chr3LHet 1401772 1401826 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_26 chr2L 715710 715765 + 27 NA promoter-TSS (FBgn0000497) protein_coding-promoter-TSS (FBgn0000497) -769 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2364 chr2R 7839973 7840027 + 27 NA intron (FBgn0033668, intron 2 of 9) protein_coding-intron (FBgn0033668, intron 2 of 8) 13011 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1644 chr2L 21717194 21717350 + 27 NA exon (FBgn0051619, exon 13 of 19) protein_coding-exon (FBgn0051619, exon 13 of 19) 33090 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3261 chr2RHet 1860221 1860296 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2956 chr2R 17904570 17904641 + 27 NA intron (FBgn0085399, intron 2 of 8) protein_coding-intron (FBgn0085399, intron 2 of 8) -17744 FBgn0034681 FBgn0034681 FBtr0071749 CG9308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3017 chr2R 18940401 18940456 + 27 NA Intergenic Intergenic -5378 FBgn0050194 FBgn0050194 FBtr0300176 CG30194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2706 chr2R 13538375 13538469 + 27 NA exon (FBgn0050106, exon 4 of 8) protein_coding-exon (FBgn0050106, exon 4 of 8) 3379 FBgn0050106 FBgn0050106 FBtr0086893 CCHa1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_255 chr2L 3854056 3854110 + 27 NA Intergenic Intergenic -8598 FBgn0031574 FBgn0031574 FBtr0077502 CG3964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_683 chr2L 10605402 10605461 + 27 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -23769 FBgn0085190 FBgn0085190 FBtr0112352 CG34161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4177 chr3L 16004555 16004644 + 27 NA exon (FBgn0263601, exon 1 of 4) protein_coding-exon (FBgn0263601, exon 1 of 4) -1190 FBgn0263601 FBgn0263601 FBtr0333578 mib1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_61 chr2L 1007986 1008040 + 27 NA TTS (FBgn0031294) protein_coding-TTS (FBgn0031294) 18877 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4626 chr3R 914487 914553 + 27 NA Intergenic Intergenic -1771 FBgn0010313 FBgn0010313 FBtr0078844 corto protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2814 chr2R 15520524 15520578 + 27 NA Intergenic Intergenic -2233 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1287 chr2L 17580450 17580504 + 27 NA Intergenic Intergenic 5803 FBgn0262400 FBgn0262400 FBtr0304303 mir-287 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2170 chr2R 4899160 4899214 + 27 NA exon (FBgn0033362, exon 1 of 6) protein_coding-exon (FBgn0033362, exon 1 of 6) 382 FBgn0033362 FBgn0033362 FBtr0301193 CG8172 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6392 chr3R 26051727 26051792 + 27 NA Intergenic Intergenic 9553 FBgn0000279 FBgn0000279 FBtr0085616 CecC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3822 chr3L 9175593 9175651 + 27 NA promoter-TSS (FBgn0004244) protein_coding-promoter-TSS (FBgn0004244) -373 FBgn0004244 FBgn0004244 FBtr0309054 Rdl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1353 chr2L 18161517 18161600 + 27 NA exon (FBgn0261804, exon 15 of 15) protein_coding-exon (FBgn0261804, exon 15 of 15) -2872 FBgn0032671 FBgn0032671 FBtr0081062 CG7200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4953 chr3R 5892648 5892702 + 27 NA promoter-TSS (FBgn0053784) protein_coding-promoter-TSS (FBgn0053784) 183 FBgn0053783 FBgn0053783 FBtr0091784 CG33783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3746 chr3L 7699544 7699598 + 27 NA exon (FBgn0261788, exon 7 of 19) protein_coding-exon (FBgn0261788, exon 7 of 19) 7176 FBgn0261788 FBgn0261788 FBtr0334062 Ank2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4868 chr3R 4332554 4332620 + 27 NA Intergenic Intergenic 4493 FBgn0037590 FBgn0037590 FBtr0081900 Or85b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6471 chr3R 27015429 27015483 + 27 NA intron (FBgn0051004, intron 4 of 14) protein_coding-intron (FBgn0051004, intron 4 of 15) -3490 FBgn0004389 FBgn0004389 FBtr0085754 bnk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_565 chr2L 8769779 8769833 + 27 NA exon (FBgn0032067, exon 5 of 5) protein_coding-exon (FBgn0032067, exon 5 of 5) -1098 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4374 chr3L 18850336 18850391 + 27 NA Intergenic Intergenic -3719 FBgn0262461 FBgn0262461 FBtr0304507 mir-315 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5065 chr3R 7540702 7540792 + 27 NA Intergenic Intergenic 3246 FBgn0037940 FBgn0037940 FBtr0082428 CG14720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_468 chr2L 7225022 7225100 + 27 NA exon (FBgn0259111, exon 11 of 11) protein_coding-exon (FBgn0259111, exon 11 of 11) -1980 FBgn0263133 FBgn0263133 FBtr0079413 ico protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3507 chr3L 2045770 2045882 + 27 NA exon (FBgn0086906, exon 32 of 41) protein_coding-exon (FBgn0086906, exon 32 of 41) -7602 FBgn0259701 FBgn0259701 FBtr0309792 CG42355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_121 chr2L 1486054 1486108 + 27 NA Intergenic Intergenic -6214 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4986 chr3R 6428392 6428446 + 27 NA intron (FBgn0001235, intron 2 of 12) protein_coding-intron (FBgn0001235, intron 2 of 11) 2973 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6387 chr3R 25809731 25809834 + 27 NA intron (FBgn0039728, intron 1 of 6) protein_coding-intron (FBgn0039728, intron 1 of 6) 608 FBgn0039728 FBgn0039728 FBtr0085545 CG7896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5896 chr3R 20259534 20259592 + 27 NA intron (FBgn0000036, intron 2 of 9) protein_coding-intron (FBgn0000036, intron 2 of 9) -6026 FBgn0263409 FBgn0263409 FBtr0309188 CR43455 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1485 chr2L 19882606 19882661 + 27 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 9917 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2464 chr2R 9407586 9407661 + 27 NA exon (FBgn0260964, exon 4 of 9) protein_coding-exon (FBgn0260964, exon 4 of 9) -1861 FBgn0033850 FBgn0033850 FBtr0087673 CG13331 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5248 chr3R 10683527 10683581 + 27 NA Intergenic Intergenic 2006 FBgn0038267 FBgn0038267 FBtr0083012 CG17304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6160 chr3R 23919917 23919971 + 27 NA Intergenic Intergenic -52658 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6238 chr3R 24580651 24580741 + 27 NA TTS (FBgn0039597) protein_coding-TTS (FBgn0039597) 2005 FBgn0039597 FBgn0039597 FBtr0085314 CG9997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2516 chr2R 10337184 10337246 + 27 NA intron (FBgn0261613, intron 3 of 5) protein_coding-intron (FBgn0261613, intron 3 of 5) 13811 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2881 chr2R 16567039 16567093 + 27 NA Intergenic Intergenic 7349 FBgn0041240 FBgn0041240 FBtr0086241 Gr57a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4632 chr3R 973751 973805 + 27 NA Intergenic Intergenic -10483 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3171 chr2RHet 444654 444708 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4045 chr3L 13638437 13638551 + 27 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 3 of 12) 24557 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1192 chr2L 16578978 16579048 + 27 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -26932 FBgn0051815 FBgn0051815 FBtr0080870 CG31815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6738 chrU 314616 314737 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3646 chr3L 6107379 6107433 + 27 NA exon (FBgn0005658, exon 6 of 10) protein_coding-exon (FBgn0005658, exon 6 of 10) 2839 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3236 chr2RHet 1415298 1415352 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1033 chr2L 14963347 14963401 + 27 NA intron (FBgn0259213, intron 1 of 19) protein_coding-intron (FBgn0259213, intron 1 of 19) 8926 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_480 chr2L 7587027 7587132 + 27 NA Intergenic Intergenic 5147 FBgn0083141 FBgn0083141 FBtr0079470 Spn7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3632 chr3L 5989590 5989644 + 27 NA promoter-TSS (FBgn0052406) protein_coding-promoter-TSS (FBgn0052406) -691 FBgn0052406 FBgn0052406 FBtr0077037 CG32406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6 chr2L 28026 28108 + 27 NA exon (FBgn0051973, exon 10 of 13) protein_coding-exon (FBgn0051973, exon 10 of 13) -2912 FBgn0031209 FBgn0031209 FBtr0113008 Ir21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1109 chr2L 15626355 15626414 + 27 NA Intergenic Intergenic -2300 FBgn0028945 FBgn0028945 FBtr0080754 CG7631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4574 chr3LHet 1362839 1362938 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6562 chr3RHet 819882 819936 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2442 chr2R 9182748 9182802 + 27 NA intron (FBgn0052843, intron 1 of 10) protein_coding-intron (FBgn0052843, intron 1 of 10) 654 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3876 chr3L 10615185 10615255 + 27 NA TTS (FBgn0260396) protein_coding-TTS (FBgn0260396) 1456 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3809 chr3L 9003731 9003814 + 27 NA promoter-TSS (FBgn0035955) protein_coding-promoter-TSS (FBgn0035955) -834 FBgn0035955 FBgn0035955 FBtr0333909 CG5194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1555 chr2L 20562132 20562186 + 27 NA promoter-TSS (FBgn0263533) pre_miRNA-promoter-TSS (FBgn0263533) -265 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1912 chr2LHet 257701 257832 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2838 chr2R 15822855 15822909 + 27 NA Intergenic Intergenic 5167 FBgn0263340 FBgn0263340 FBtr0308772 CR43421 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4276 chr3L 17264050 17264104 + 27 NA Intergenic Intergenic 6561 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1484 chr2L 19878317 19878404 + 27 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 14190 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1427 chr2L 19255904 19255963 + 27 NA Intergenic Intergenic 6960 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6737 chrU 311856 311920 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2152 chr2R 4684841 4684895 + 27 NA Intergenic Intergenic -1154 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6427 chr3R 26737030 26737097 + 27 NA Intergenic Intergenic -1547 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5844 chr3R 18680747 18680801 + 27 NA Intergenic Intergenic -3248 FBgn0264428 FBgn0264428 FBtr0332548 CR43846 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6645 chr4 968415 968503 + 27 NA exon (FBgn0019985, exon 9 of 9) protein_coding-exon (FBgn0019985, exon 9 of 9) 10559 FBgn0052016 FBgn0052016 FBtr0089233 CG32016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4004 chr3L 12865915 12865995 + 27 NA Intergenic Intergenic -10024 FBgn0036320 FBgn0036320 FBtr0075936 CG10943 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5570 chr3R 14531694 14531786 + 27 NA exon (FBgn0015323, exon 1 of 2) protein_coding-exon (FBgn0015323, exon 1 of 2) 484 FBgn0000303 FBgn0000303 FBtr0089368 Cha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5965 chr3R 21973932 21974015 + 27 NA Intergenic Intergenic 15097 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1880 chr2L 22905903 22906022 + 27 NA exon (FBgn0250907, exon 4 of 9) protein_coding-exon (FBgn0250907, exon 4 of 9) 12598 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4627 chr3R 929113 929167 + 27 NA Intergenic Intergenic 5760 FBgn0262605 FBgn0262605 FBtr0305279 CG43131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1345 chr2L 18075602 18075678 + 27 NA Intergenic Intergenic -2629 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6883 chrUextra 456764 456848 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2114 chr2R 4212026 4212080 + 27 NA Intergenic Intergenic -2952 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1424 chr2L 19214026 19214116 + 27 NA Intergenic Intergenic 23725 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3114 chr2R 20739510 20739570 + 27 NA Intergenic Intergenic 3041 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6044 chr3R 22600215 22600269 + 27 NA Intergenic Intergenic 9688 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3695 chr3L 6940805 6940873 + 27 NA exon (FBgn0035719, exon 4 of 6) protein_coding-exon (FBgn0035719, exon 4 of 6) 4883 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3311 chr2RHet 1957574 1957632 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4265 chr3L 17160778 17160858 + 27 NA TTS (FBgn0263381) ncRNA-TTS (FBgn0263381) 855 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3255 chr2RHet 1736811 1736865 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2964 chr2R 18130424 18130483 + 27 NA Intergenic Intergenic -14729 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1154 chr2L 16163145 16163206 + 27 NA Intergenic Intergenic -2656 FBgn0001991 FBgn0001991 FBtr0332020 Ca-alpha1D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4891 chr3R 4589195 4589249 + 27 NA intron (FBgn0083971, intron 2 of 4) protein_coding-intron (FBgn0037625, intron 2 of 3) 4691 FBgn0037625 FBgn0037625 FBtr0081943 CG11768 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3417 chr3L 613245 613336 + 27 NA Intergenic Intergenic 3356 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6467 chr3R 26983556 26983618 + 27 NA TTS (FBgn0086704) protein_coding-TTS (FBgn0086704) 11238 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3393 chr2RHet 3235086 3235169 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2574 chr2R 11298555 11298646 + 27 NA intron (FBgn0263980, intron 2 of 15) protein_coding-intron (FBgn0263980, intron 2 of 14) 2249 FBgn0014865 FBgn0014865 FBtr0087386 Mtk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3090 chr2R 20260399 20260453 + 27 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) -1160 FBgn0053537 FBgn0053537 FBtr0100849 tRNA:N5:60C tRNA Nup98-S2-pascual-garcia2017_R1_peak_1276 chr2L 17359370 17359424 + 27 NA Intergenic Intergenic -4099 FBgn0051804 FBgn0051804 FBtr0080967 CG31804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3614 chr3L 5706868 5706923 + 27 NA intron (FBgn0085447, intron 5 of 21) protein_coding-intron (FBgn0085447, intron 17 of 34) -6495 FBgn0086073 FBgn0086073 FBtr0114349 snoRNA:Me18S-A1494 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6529 chr3R 27769988 27770042 + 27 NA intron (FBgn0011224, intron 5 of 16) protein_coding-intron (FBgn0011224, intron 4 of 13) 36876 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_236 chr2L 3596381 3596435 + 27 NA Intergenic Intergenic -6107 FBgn0264371 FBgn0264371 FBtr0332223 CR43823 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2098 chr2R 3917301 3917356 + 27 NA exon (FBgn0263970, exon 1 of 2) ncRNA-exon (FBgn0263970, exon 1 of 2) 105 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5788 chr3R 17294080 17294178 + 27 NA Intergenic Intergenic 2706 FBgn0263407 FBgn0263407 FBtr0309186 CR43453 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2452 chr2R 9278948 9279002 + 27 NA exon (FBgn0263774, exon 1 of 2) protein_coding-exon (FBgn0263774, exon 1 of 2) 1748 FBgn0263774 FBgn0263774 FBtr0310562 CG43691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1848 chr2L 22701191 22701254 + 27 NA Intergenic Intergenic -10214 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1011 chr2L 14758140 14758213 + 27 NA Intergenic Intergenic -2591 FBgn0028870 FBgn0028870 FBtr0080670 CG4691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5873 chr3R 19558936 19558990 + 27 NA promoter-TSS (FBgn0263782) protein_coding-promoter-TSS (FBgn0263782) -232 FBgn0028691 FBgn0028691 FBtr0084470 Rpn9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6477 chr3R 27068377 27068489 + 27 NA exon (FBgn0051005, exon 2 of 8) protein_coding-exon (FBgn0051005, exon 2 of 8) -7430 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4023 chr3L 13134842 13134908 + 27 NA Intergenic Intergenic 5506 FBgn0053262 FBgn0053262 FBtr0302393 CG33262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2717 chr2R 13716688 13716750 + 27 NA intron (FBgn0259211, intron 5 of 13) protein_coding-intron (FBgn0259211, intron 5 of 12) 5649 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5540 chr3R 14202723 14202777 + 27 NA Intergenic Intergenic 4147 FBgn0038610 FBgn0038610 FBtr0083583 CG7675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3013 chr2R 18919083 18919137 + 27 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) 11352 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6571 chr3RHet 1541683 1541760 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6193 chr3R 24188973 24189130 + 27 NA Intergenic Intergenic 11087 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7086 chrX 7098945 7099015 + 27 NA intron (FBgn0029939, intron 1 of 3) protein_coding-intron (FBgn0029939, intron 2 of 5) 8918 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4522 chr3L 24047877 24047936 + 27 NA Intergenic Intergenic -19423 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4977 chr3R 6351966 6352020 + 27 NA intron (FBgn0001235, intron 9 of 12) protein_coding-intron (FBgn0001235, intron 8 of 11) -13215 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3566 chr3L 3948228 3948282 + 27 NA TTS (FBgn0035479) protein_coding-TTS (FBgn0035479) 364 FBgn0035478 FBgn0035478 FBtr0073164 CG10853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3738 chr3L 7559917 7559971 + 27 NA exon (FBgn0035798, exon 5 of 9) protein_coding-exon (FBgn0035798, exon 5 of 9) 4234 FBgn0035798 FBgn0035798 FBtr0331840 frac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_744 chr2L 11584682 11584736 + 27 NA TTS (FBgn0028412) protein_coding-TTS (FBgn0028412) 2124 FBgn0028412 FBgn0028412 FBtr0305324 Mst33A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_891 chr2L 13869589 13869688 + 27 NA intron (FBgn0028509, intron 1 of 7) protein_coding-intron (FBgn0028509, intron 1 of 7) 20226 FBgn0028532 FBgn0028532 FBtr0080551 CG7968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6530 chr3R 27777421 27777475 + 27 NA intron (FBgn0011224, intron 5 of 15) protein_coding-intron (FBgn0011224, intron 4 of 13) 29443 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6754 chrU 1063937 1063991 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6554 chr3RHet 755598 755652 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_865 chr2L 13411395 13411449 + 27 NA TTS (FBgn0032521) protein_coding-TTS (FBgn0032521) 194 FBgn0003983 FBgn0003983 FBtr0080521 Vm34Ca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4122 chr3L 14871295 14871349 + 27 NA exon (FBgn0036454, exon 14 of 19) protein_coding-exon (FBgn0036454, exon 14 of 19) 16194 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5866 chr3R 19221155 19221234 + 27 NA Intergenic Intergenic 5328 FBgn0263217 FBgn0263217 FBtr0307594 CR43387 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2241 chr2R 6095366 6095426 + 27 NA exon (FBgn0000448, exon 9 of 9) protein_coding-exon (FBgn0000448, exon 9 of 9) -8200 FBgn0085250 FBgn0085250 FBtr0299834 CG34221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6569 chr3RHet 1222824 1222904 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2755 chr2R 14359274 14359328 + 27 NA intron (FBgn0028496, intron 7 of 18) protein_coding-intron (FBgn0028496, intron 7 of 18) -17334 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1267 chr2L 17332660 17332753 + 27 NA Intergenic Intergenic -20886 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1370 chr2L 18357696 18357769 + 27 NA exon (FBgn0011559, exon 2 of 2) protein_coding-exon (FBgn0011559, exon 2 of 2) 1294 FBgn0011559 FBgn0011559 FBtr0081054 Acp36DE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5455 chr3R 13295771 13295825 + 27 NA Intergenic Intergenic -13300 FBgn0038512 FBgn0038512 FBtr0083443 CG14330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7238 chrX 18138119 18138173 + 27 NA promoter-TSS (FBgn0030904) protein_coding-promoter-TSS (FBgn0030904) -829 FBgn0030904 FBgn0030904 FBtr0300182 upd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1551 chr2L 20547938 20547992 + 27 NA Intergenic Intergenic -14459 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1381 chr2L 18548122 18548185 + 27 NA intron (FBgn0085370, intron 1 of 17) protein_coding-intron (FBgn0085370, intron 1 of 16) 23495 FBgn0085370 FBgn0085370 FBtr0303162 Pde11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3943 chr3L 11895031 11895085 + 27 NA Intergenic Intergenic 3353 FBgn0263615 FBgn0263615 FBtr0309979 CR43624 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5836 chr3R 18364013 18364148 + 27 NA intron (FBgn0038983, intron 1 of 4) protein_coding-intron (FBgn0038983, intron 1 of 4) 1559 FBgn0038983 FBgn0038983 FBtr0084285 CG5326 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3045 chr2R 19534072 19534133 + 27 NA intron (FBgn0004795, intron 5 of 11) protein_coding-intron (FBgn0004795, intron 5 of 11) -10992 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2898 chr2R 16835288 16835357 + 27 NA Intergenic Intergenic 1847 FBgn0065059 FBgn0065059 FBtr0091781 snoRNA:660 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5002 chr3R 6575908 6575962 + 27 NA exon (FBgn0004841, exon 1 of 8) protein_coding-exon (FBgn0004841, exon 1 of 8) 1015 FBgn0004841 FBgn0004841 FBtr0082315 Takr86C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5819 chr3R 18098011 18098102 + 27 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -20592 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4736 chr3R 2594143 2594198 + 27 NA intron (FBgn0261638, intron 1 of 2) ncRNA-intron (FBgn0261638, intron 1 of 2) 1398 FBgn0261638 FBgn0261638 FBtr0309069 CR42721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5188 chr3R 9434812 9434872 + 27 NA promoter-TSS (FBgn0261819) protein_coding-promoter-TSS (FBgn0261819) 126 FBgn0038160 FBgn0038160 FBtr0082861 CG9759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1929 chr2R 293273 293337 + 27 NA intron (FBgn0260798, intron 8 of 15) protein_coding-intron (FBgn0260798, intron 7 of 14) 65253 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6305 chr3R 25276334 25276412 + 27 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -29047 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6434 chr3R 26753995 26754049 + 27 NA intron (FBgn0020912, intron 4 of 4) protein_coding-intron (FBgn0020912, intron 4 of 4) 8207 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2027 chr2R 2654853 2654907 + 27 NA intron (FBgn0085421, intron 7 of 15) protein_coding-intron (FBgn0085421, intron 8 of 16) 2383 FBgn0085421 FBgn0085421 FBtr0329851 Epac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1444 chr2L 19463083 19463153 + 27 NA Intergenic Intergenic -1149 FBgn0000964 FBgn0000964 FBtr0329891 tj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2613 chr2R 12017429 12017502 + 27 NA intron (FBgn0086676, intron 1 of 7) protein_coding-intron (FBgn0086676, intron 1 of 7) 4977 FBgn0086676 FBgn0086676 FBtr0089593 spin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_431 chr2L 6574154 6574211 + 27 NA exon (FBgn0031835, exon 14 of 16) protein_coding-exon (FBgn0031835, exon 14 of 16) -7595 FBgn0031834 FBgn0031834 FBtr0079330 CG13766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3098 chr2R 20476411 20476521 + 27 NA intron (FBgn0020521, intron 2 of 7) protein_coding-intron (FBgn0020521, intron 3 of 8) 7680 FBgn0020521 FBgn0020521 FBtr0301502 pio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_54 chr2L 942423 942486 + 27 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 19661 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6941 chrUextra 18286402 18286467 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3621 chr3L 5815954 5816008 + 27 NA intron (FBgn0003984, intron 1 of 5) protein_coding-intron (FBgn0003984, intron 1 of 5) -9788 FBgn0035640 FBgn0035640 FBtr0077113 mad2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5051 chr3R 7201103 7201194 + 27 NA exon (FBgn0004595, exon 4 of 8) protein_coding-exon (FBgn0004595, exon 4 of 8) -22295 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4418 chr3L 20650865 20650919 + 27 NA Intergenic Intergenic 20593 FBgn0037014 FBgn0037014 FBtr0078243 CG13251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4917 chr3R 5141251 5141408 + 27 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -6163 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_233 chr2L 3575423 3575489 + 27 NA promoter-TSS (FBgn0264363) protein_coding-promoter-TSS (FBgn0264363) 106 FBgn0264370 FBgn0264370 FBtr0332221 CR43822 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3902 chr3L 10906805 10906859 + 27 NA Intergenic Intergenic -14609 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_697 chr2L 10774750 10774804 + 27 NA exon (FBgn0051869, exon 6 of 7) protein_coding-exon (FBgn0051869, exon 6 of 7) 3909 FBgn0032299 FBgn0032299 FBtr0080136 CG17127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2809 chr2R 15462342 15462396 + 27 NA intron (FBgn0003435, intron 2 of 8) protein_coding-intron (FBgn0003435, intron 3 of 9) -8697 FBgn0003435 FBgn0003435 FBtr0301610 sm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3560 chr3L 3560341 3560395 + 27 NA intron (FBgn0005640, intron 2 of 10) protein_coding-intron (FBgn0005640, intron 2 of 10) -33455 FBgn0053504 FBgn0053504 FBtr0100848 snRNA:U7 snRNA Nup98-S2-pascual-garcia2017_R1_peak_4728 chr3R 2534298 2534359 + 27 NA exon (FBgn0051481, exon 9 of 9) protein_coding-exon (FBgn0051481, exon 9 of 9) 4524 FBgn0004783 FBgn0004783 FBtr0081691 Ccp84Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4652 chr3R 1278815 1278869 + 27 NA intron (FBgn0037326, intron 4 of 7) protein_coding-intron (FBgn0037326, intron 4 of 7) 10000 FBgn0037327 FBgn0037327 FBtr0330027 PEK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1031 chr2L 14957849 14957984 + 27 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 14384 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3847 chr3L 10069957 10070029 + 27 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 12507 FBgn0036066 FBgn0036066 FBtr0076316 CG14160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5273 chr3R 11254070 11254177 + 27 NA intron (FBgn0038339, intron 1 of 4) protein_coding-intron (FBgn0038339, intron 1 of 4) 5783 FBgn0038339 FBgn0038339 FBtr0113239 CG6118 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2150 chr2R 4677211 4677322 + 27 NA Intergenic Intergenic -2872 FBgn0033330 FBgn0033330 FBtr0088714 CG8746 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2997 chr2R 18669258 18669312 + 27 NA intron (FBgn0259145, intron 1 of 11) protein_coding-intron (FBgn0259145, intron 1 of 11) -2524 FBgn0061435 FBgn0061435 FBtr0300125 CG30270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5897 chr3R 20261654 20261730 + 27 NA intron (FBgn0000036, intron 2 of 9) protein_coding-intron (FBgn0000036, intron 2 of 9) -3897 FBgn0263409 FBgn0263409 FBtr0309188 CR43455 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4708 chr3R 2295688 2295742 + 27 NA exon (FBgn0037447, exon 1 of 1) protein_coding-exon (FBgn0037447, exon 1 of 1) 1581 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1744 chr2L 22078342 22078415 + 27 NA Intergenic Intergenic -1294 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4027 chr3L 13232434 13232488 + 27 NA intron (FBgn0023095, intron 2 of 4) protein_coding-intron (FBgn0023095, intron 2 of 4) 9341 FBgn0052119 FBgn0052119 FBtr0075867 CG32119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4436 chr3L 21472955 21473009 + 27 NA Intergenic Intergenic -3403 FBgn0014143 FBgn0014143 FBtr0078395 croc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5354 chr3R 12187941 12188012 + 27 NA exon (FBgn0038422, exon 3 of 5) protein_coding-exon (FBgn0038422, exon 3 of 5) -2146 FBgn0259917 FBgn0259917 FBtr0300198 CG42446 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5847 chr3R 18827026 18827083 + 27 NA exon (FBgn0085404, exon 5 of 5) protein_coding-exon (FBgn0085404, exon 5 of 5) -2804 FBgn0263390 FBgn0263390 FBtr0309100 Nha2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4041 chr3L 13550003 13550057 + 27 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -37325 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1570 chr2L 20700426 20700490 + 27 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 13958 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_685 chr2L 10648181 10648278 + 27 NA exon (FBgn0032275, exon 2 of 5) protein_coding-exon (FBgn0032275, exon 2 of 5) 1794 FBgn0032275 FBgn0032275 FBtr0110819 CG17097 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4532 chr3L 24120012 24120102 + 27 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 52728 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5619 chr3R 15262830 15262884 + 27 NA intron (FBgn0051221, intron 2 of 4) protein_coding-intron (FBgn0051221, intron 2 of 4) -11936 FBgn0038706 FBgn0038706 FBtr0083770 CG3517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1667 chr2L 21803164 21803228 + 27 NA Intergenic Intergenic -7766 FBgn0051612 FBgn0051612 FBtr0300999 CG31612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4355 chr3L 18306956 18307014 + 27 NA Intergenic Intergenic -9468 FBgn0015946 FBgn0015946 FBtr0075130 grim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1070 chr2L 15361355 15361409 + 27 NA exon (FBgn0032563, exon 1 of 1) protein_coding-exon (FBgn0032563, exon 1 of 1) 245 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6613 chr4 555101 555179 + 27 NA exon (FBgn0004607, exon 11 of 14) protein_coding-exon (FBgn0004607, exon 11 of 14) 23340 FBgn0264618 FBgn0264618 FBtr0333707 CR43958 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_923 chr2L 14296689 14296763 + 27 NA intron (FBgn0261563, intron 4 of 12) protein_coding-intron (FBgn0261563, intron 4 of 15) -1332 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1391 chr2L 18745968 18746022 + 27 NA Intergenic Intergenic 5637 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_260 chr2L 4080743 4080817 + 27 NA intron (FBgn0000547, intron 5 of 8) protein_coding-intron (FBgn0000547, intron 5 of 8) -5110 FBgn0086032 FBgn0086032 FBtr0114308 snoRNA:Me28S-C437 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3089 chr2R 20250336 20250390 + 27 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) -11223 FBgn0053537 FBgn0053537 FBtr0100849 tRNA:N5:60C tRNA Nup98-S2-pascual-garcia2017_R1_peak_4515 chr3L 23935041 23935114 + 27 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 32858 FBgn0264570 FBgn0264570 FBtr0333470 CR43942 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3823 chr3L 9277911 9278017 + 27 NA exon (FBgn0264000, exon 16 of 17) protein_coding-exon (FBgn0264000, exon 16 of 17) 32886 FBgn0264000 FBgn0264000 FBtr0330341 Glu-RIB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6464 chr3R 26972925 26973006 + 27 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 12851 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4718 chr3R 2446714 2446804 + 27 NA Intergenic Intergenic 6863 FBgn0037460 FBgn0037460 FBtr0081701 sowi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6656 chr4 1022741 1022795 + 27 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 12417 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6544 chr3RHet 212264 212318 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_835 chr2L 12877687 12877768 + 27 NA Intergenic Intergenic -34803 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_71 chr2L 1063911 1063974 + 27 NA intron (FBgn0003310, intron 1 of 4) protein_coding-intron (FBgn0003310, intron 1 of 4) 13869 FBgn0003310 FBgn0003310 FBtr0077994 S protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6265 chr3R 24778445 24778499 + 27 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 17604 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1226 chr2L 17024907 17024961 + 27 NA Intergenic Intergenic -11880 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4587 chr3LHet 2474513 2474588 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4760 chr3R 2817791 2817867 + 27 NA intron (FBgn0260642, intron 1 of 6) protein_coding-intron (FBgn0260642, intron 1 of 6) -59267 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4870 chr3R 4363266 4363324 + 27 NA Intergenic Intergenic -8696 FBgn0040531 FBgn0040531 FBtr0112769 CG11741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4702 chr3R 2138120 2138205 + 27 NA Intergenic Intergenic 2444 FBgn0051560 FBgn0051560 FBtr0078609 CG31560 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_278 chr2L 4276005 4276059 + 27 NA Intergenic Intergenic 3283 FBgn0031592 FBgn0031592 FBtr0077476 Art2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3280 chr2RHet 1904619 1904699 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3993 chr3L 12684060 12684215 + 27 NA Intergenic Intergenic -2602 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5122 chr3R 8572805 8572859 + 27 NA exon (FBgn0038084, exon 5 of 6) protein_coding-exon (FBgn0038084, exon 5 of 6) -3430 FBgn0038083 FBgn0038083 FBtr0302379 CG5999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3267 chr2RHet 1876020 1876154 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6006 chr3R 22319567 22319621 + 27 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 27799 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_227 chr2L 3497671 3497769 + 27 NA intron (FBgn0014396, intron 14 of 15) protein_coding-intron (FBgn0014396, intron 14 of 15) -6649 FBgn0031542 FBgn0031542 FBtr0077568 CG15414 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3639 chr3L 6044357 6044482 + 27 NA exon (FBgn0035665, exon 2 of 2) protein_coding-exon (FBgn0035665, exon 2 of 2) 562 FBgn0035665 FBgn0035665 FBtr0077041 Jon65Aiii protein_coding Nup98-S2-pascual-garcia2017_R1_peak_958 chr2L 14495856 14495910 + 27 NA promoter-TSS (FBgn0028882) tRNA-promoter-TSS (FBgn0028882) 5 FBgn0028882 FBgn0028882 FBtr0080644 tRNA:P:35Bd tRNA Nup98-S2-pascual-garcia2017_R1_peak_2808 chr2R 15461139 15461193 + 27 NA intron (FBgn0003435, intron 5 of 10) protein_coding-intron (FBgn0003435, intron 5 of 9) -7494 FBgn0003435 FBgn0003435 FBtr0301610 sm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1416 chr2L 19091739 19091829 + 27 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -10260 FBgn0263982 FBgn0263982 FBtr0330018 CG43731 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7102 chrX 8266411 8266465 + 27 NA Intergenic Intergenic -13376 FBgn0030033 FBgn0030033 FBtr0071173 CG1387 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3611 chr3L 5628816 5628877 + 27 NA promoter-TSS (FBgn0035625) protein_coding-promoter-TSS (FBgn0035625) -7901 FBgn0035625 FBgn0035625 FBtr0331809 Blimp-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5968 chr3R 22006465 22006534 + 27 NA intron (FBgn0051323, intron 1 of 4) protein_coding-intron (FBgn0051323, intron 1 of 4) -4474 FBgn0051086 FBgn0051086 FBtr0084989 CG31086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3441 chr3L 729117 729177 + 27 NA Intergenic Intergenic 8332 FBgn0264310 FBgn0264310 FBtr0331773 CR43785 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1825 chr2L 22592816 22592900 + 27 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 51669 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6067 chr3R 23043091 23043185 + 27 NA exon (FBgn0054006, exon 2 of 3) protein_coding-exon (FBgn0054006, exon 2 of 3) 558 FBgn0054006 FBgn0054006 FBtr0303711 CG34006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1191 chr2L 16578844 16578933 + 27 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -27057 FBgn0051815 FBgn0051815 FBtr0080870 CG31815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_703 chr2L 10867935 10867989 + 27 NA Intergenic Intergenic -2205 FBgn0032311 FBgn0032311 FBtr0080144 CG12517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2309 chr2R 7301262 7301316 + 27 NA promoter-TSS (FBgn0040503) protein_coding-promoter-TSS (FBgn0040503) -726 FBgn0040503 FBgn0040503 FBtr0088135 CG7763 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6326 chr3R 25456609 25456680 + 27 NA exon (FBgn0015129, exon 5 of 5) protein_coding-exon (FBgn0015129, exon 5 of 5) 11888 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1618 chr2L 21339992 21340046 + 27 NA exon (FBgn0023091, exon 2 of 2) protein_coding-exon (FBgn0023091, exon 2 of 2) -4588 FBgn0032943 FBgn0032943 FBtr0273404 Tsp39D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4963 chr3R 6030236 6030290 + 27 NA exon (FBgn0025879, exon 5 of 5) protein_coding-exon (FBgn0025879, exon 5 of 5) 8463 FBgn0025879 FBgn0025879 FBtr0082245 Timp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3919 chr3L 11445579 11445691 + 27 NA Intergenic Intergenic 5935 FBgn0036160 FBgn0036160 FBtr0076178 CG12289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_373 chr2L 5493808 5493871 + 27 NA Intergenic Intergenic -23780 FBgn0031707 FBgn0031707 FBtr0329966 CG14020 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6088 chr3R 23221977 23222063 + 27 NA intron (FBgn0016061, intron 8 of 16) protein_coding-intron (FBgn0016061, intron 8 of 16) -26433 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1550 chr2L 20542660 20542714 + 27 NA Intergenic Intergenic -19737 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6857 chrU 7998307 7998361 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_983 chr2L 14617474 14617564 + 27 NA TTS (FBgn0000055) protein_coding-TTS (FBgn0000055) 1250 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_296 chr2L 4418999 4419064 + 27 NA promoter-TSS (FBgn0051963) tRNA-promoter-TSS (FBgn0051963) 17 FBgn0051963 FBgn0051963 FBtr0077458 tRNA:CR31963 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4025 chr3L 13207173 13207252 + 27 NA promoter-TSS (FBgn0052127) tRNA-promoter-TSS (FBgn0052127) 3 FBgn0052127 FBgn0052127 FBtr0075831 tRNA:CR32127 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6582 chr3RHet 2033392 2033446 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1372 chr2L 18372810 18372864 + 27 NA intron (FBgn0000636, intron 1 of 6) protein_coding-intron (FBgn0000636, intron 1 of 7) -5789 FBgn0085200 FBgn0085200 FBtr0305066 CG34171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4528 chr3L 24118179 24118300 + 27 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 50910 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6202 chr3R 24235080 24235138 + 27 NA Intergenic Intergenic -8821 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6040 chr3R 22592841 22592909 + 27 NA Intergenic Intergenic 17055 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4941 chr3R 5693233 5693309 + 27 NA intron (FBgn0037766, intron 1 of 2) protein_coding-intron (FBgn0037766, intron 1 of 2) 571 FBgn0037766 FBgn0037766 FBtr0330082 Teh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3498 chr3L 1927709 1927763 + 27 NA intron (FBgn0261723, intron 4 of 4) protein_coding-intron (FBgn0261723, intron 4 of 4) 2095 FBgn0052312 FBgn0052312 FBtr0072840 tRNA:CR32312 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1322 chr2L 17888718 17888772 + 27 NA Intergenic Intergenic -5067 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4863 chr3R 4284989 4285043 + 27 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 18299 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1487 chr2L 19888660 19888722 + 27 NA intron (FBgn0263873, intron 3 of 15) protein_coding-intron (FBgn0263873, intron 4 of 15) 3859 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7171 chrX 12821911 12821984 + 27 NA intron (FBgn0086675, intron 2 of 6) protein_coding-intron (FBgn0086675, intron 2 of 7) -10603 FBgn0086675 FBgn0086675 FBtr0333319 fne protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4579 chr3LHet 2001051 2001132 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4157 chr3L 15466090 15466172 + 27 NA exon (FBgn0036496, exon 3 of 3) protein_coding-exon (FBgn0036496, exon 3 of 3) 1079 FBgn0036496 FBgn0036496 FBtr0332815 CG7804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4201 chr3L 16244348 16244414 + 27 NA exon (FBgn0036583, exon 1 of 1) protein_coding-exon (FBgn0036583, exon 1 of 1) 1074 FBgn0036583 FBgn0036583 FBtr0075482 CG13055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3947 chr3L 12047565 12047625 + 27 NA intron (FBgn0041096, intron 2 of 6) protein_coding-intron (FBgn0041096, intron 2 of 7) 9916 FBgn0263647 FBgn0263647 FBtr0310008 CG43638 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6279 chr3R 25025162 25025226 + 27 NA promoter-TSS (FBgn0014427) protein_coding-promoter-TSS (FBgn0014427) -980 FBgn0014427 FBgn0014427 FBtr0085390 CG11899 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7072 chrX 5907247 5907387 + 27 NA promoter-TSS (FBgn0029003) protein_coding-promoter-TSS (FBgn0029003) -106 FBgn0029003 FBgn0029003 FBtr0070890 mab-21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4454 chr3L 22272551 22272605 + 27 NA exon (FBgn0025702, exon 4 of 9) protein_coding-exon (FBgn0025702, exon 4 of 9) 2114 FBgn0025702 FBgn0025702 FBtr0306597 srpk79D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6293 chr3R 25187188 25187250 + 27 NA Intergenic Intergenic -41883 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1610 chr2L 21235359 21235448 + 27 NA intron (FBgn0051626, intron 1 of 2) protein_coding-intron (FBgn0051626, intron 1 of 2) -1677 FBgn0051626 FBgn0051626 FBtr0081486 CG31626 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4813 chr3R 3574324 3574408 + 27 NA exon (FBgn0037513, exon 3 of 4) protein_coding-exon (FBgn0037513, exon 3 of 4) 1432 FBgn0037513 FBgn0037513 FBtr0081780 pyd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6777 chrU 1590663 1590751 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4613 chr3R 694769 694823 + 27 NA exon (FBgn0003002, exon 3 of 3) protein_coding-exon (FBgn0003002, exon 3 of 3) 9459 FBgn0020280 FBgn0020280 FBtr0078852 laf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2387 chr2R 8264606 8264660 + 27 NA exon (FBgn0050045, exon 3 of 3) protein_coding-exon (FBgn0050045, exon 3 of 3) 458 FBgn0050045 FBgn0050045 FBtr0113359 Cpr49Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2049 chr2R 3186541 3186600 + 27 NA exon (FBgn0003174, exon 6 of 9) protein_coding-exon (FBgn0003174, exon 6 of 9) -12343 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1828 chr2L 22594666 22594726 + 27 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 49831 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1074 chr2L 15388096 15388198 + 27 NA Intergenic Intergenic -26520 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_706 chr2L 10918201 10918356 + 27 NA intron (FBgn0261871, intron 7 of 8) protein_coding-intron (FBgn0261871, intron 6 of 7) -7743 FBgn0032315 FBgn0032315 FBtr0080175 CG14069 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1171 chr2L 16382444 16382537 + 27 NA Intergenic Intergenic 16571 FBgn0028841 FBgn0028841 FBtr0080859 jhamt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5361 chr3R 12229154 12229372 + 27 NA exon (FBgn0003513, exon 1 of 8) protein_coding-exon (FBgn0003513, exon 1 of 8) 149 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2631 chr2R 12249529 12249583 + 27 NA exon (FBgn0034121, exon 4 of 4) protein_coding-exon (FBgn0034121, exon 4 of 4) 425 FBgn0034121 FBgn0034121 FBtr0087153 CG6262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4214 chr3L 16387674 16387750 + 27 NA promoter-TSS (FBgn0036627) protein_coding-promoter-TSS (FBgn0036627) -17 FBgn0036627 FBgn0036627 FBtr0075388 Grp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6475 chr3R 27060144 27060299 + 27 NA intron (FBgn0039833, intron 1 of 5) protein_coding-intron (FBgn0039833, intron 1 of 5) 782 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4733 chr3R 2571794 2571848 + 27 NA TTS (FBgn0085326) protein_coding-TTS (FBgn0085326) 1864 FBgn0085326 FBgn0085326 FBtr0112493 CG34297 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_267 chr2L 4140512 4140566 + 27 NA Intergenic Intergenic -8740 FBgn0031585 FBgn0031585 FBtr0077468 CG2955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4480 chr3L 23528696 23528786 + 27 NA Intergenic Intergenic -20284 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3568 chr3L 3976845 3976899 + 27 NA Intergenic Intergenic 3973 FBgn0264516 FBgn0264516 FBtr0333135 CG43915 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4464 chr3L 22995486 22995540 + 27 NA exon (FBgn0262509, exon 2 of 23) protein_coding-exon (FBgn0262509, exon 2 of 23) 4041 FBgn0262509 FBgn0262509 FBtr0304836 nrm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7110 chrX 8671187 8671241 + 27 NA intron (FBgn0026411, intron 3 of 6) protein_coding-intron (FBgn0026411, intron 3 of 6) 8172 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2916 chr2R 17229525 17229607 + 27 NA promoter-TSS (FBgn0034622) protein_coding-promoter-TSS (FBgn0034622) 76 FBgn0034622 FBgn0034622 FBtr0300455 CG15666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6848 chrU 6291800 6291892 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1014 chr2L 14796615 14796669 + 27 NA promoter-TSS (FBgn0028866) protein_coding-promoter-TSS (FBgn0028866) -105 FBgn0028866 FBgn0028866 FBtr0080687 CG18420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_42 chr2L 797326 797420 + 27 NA Intergenic Intergenic -6575 FBgn0000442 FBgn0000442 FBtr0078042 Pkg21D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5301 chr3R 11579421 11579531 + 27 NA Intergenic Intergenic 9100 FBgn0038355 FBgn0038355 FBtr0083167 CG4520 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4572 chr3LHet 1339195 1339261 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_329 chr2L 4780540 4780642 + 27 NA intron (FBgn0031627, intron 1 of 6) protein_coding-intron (FBgn0031627, intron 1 of 6) 13449 FBgn0031627 FBgn0031627 FBtr0077418 CG15630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5528 chr3R 14060658 14060783 + 27 NA Intergenic Intergenic -1196 FBgn0011701 FBgn0011701 FBtr0083564 repo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5081 chr3R 7887624 7887678 + 27 NA exon (FBgn0037988, exon 3 of 5) protein_coding-exon (FBgn0037988, exon 3 of 5) 1015 FBgn0037988 FBgn0037988 FBtr0082552 CG14740 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1539 chr2L 20499036 20499090 + 27 NA Intergenic Intergenic 3957 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2317 chr2R 7381231 7381318 + 27 NA intron (FBgn0001269, intron 1 of 4) protein_coding-intron (FBgn0001269, intron 2 of 5) 18064 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2145 chr2R 4640878 4640947 + 27 NA exon (FBgn0027585, exon 2 of 8) protein_coding-exon (FBgn0027585, exon 2 of 8) 16037 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3799 chr3L 8783143 8783201 + 27 NA intron (FBgn0261259, intron 15 of 18) protein_coding-intron (FBgn0261259, intron 13 of 16) -1527 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1936 chr2R 544195 544303 + 27 NA Intergenic Intergenic -15113 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5424 chr3R 12760266 12760320 + 27 NA promoter-TSS (FBgn0000015) protein_coding-promoter-TSS (FBgn0000015) -2958 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3132 chr2R 21113973 21114049 + 27 NA promoter-TSS (FBgn0001325) protein_coding-promoter-TSS (FBgn0001325) -123 FBgn0001325 FBgn0001325 FBtr0072449 Kr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3206 chr2RHet 759865 760015 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5023 chr3R 6918020 6918074 + 27 NA Intergenic Intergenic 3905 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3900 chr3L 10896941 10897017 + 27 NA Intergenic Intergenic -4756 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_892 chr2L 13915077 13915131 + 27 NA exon (FBgn0032536, exon 1 of 9) protein_coding-exon (FBgn0032536, exon 1 of 9) 379 FBgn0032536 FBgn0032536 FBtr0100327 Ance-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3314 chr2RHet 1967403 1967476 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3739 chr3L 7594699 7594814 + 27 NA intron (FBgn0035802, intron 1 of 16) protein_coding-intron (FBgn0035802, intron 1 of 16) 4426 FBgn0035802 FBgn0035802 FBtr0089851 CG33275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4082 chr3L 14150407 14150479 + 27 NA Intergenic Intergenic 21277 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_29 chr2L 740192 740246 + 27 NA intron (FBgn0026438, intron 4 of 7) protein_coding-intron (FBgn0026438, intron 4 of 7) 4176 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6422 chr3R 26694236 26694297 + 27 NA exon (FBgn0039805, exon 3 of 3) protein_coding-exon (FBgn0039805, exon 3 of 3) 1021 FBgn0039805 FBgn0039805 FBtr0085710 Cpr100A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4541 chr3L 24370912 24370966 + 27 NA intron (FBgn0259697, intron 3 of 5) protein_coding-intron (FBgn0259697, intron 3 of 5) 52972 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2648 chr2R 12409730 12409784 + 27 NA intron (FBgn0011260, intron 1 of 12) protein_coding-intron (FBgn0011260, intron 2 of 14) 5197 FBgn0011260 FBgn0011260 FBtr0087091 Sema-2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5535 chr3R 14136614 14136720 + 27 NA promoter-TSS (FBgn0038603) protein_coding-promoter-TSS (FBgn0038603) -39 FBgn0038603 FBgn0038603 FBtr0083592 PKD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_829 chr2L 12805448 12805508 + 27 NA Intergenic Intergenic 2862 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2474 chr2R 9563668 9563722 + 27 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 8454 FBgn0033864 FBgn0033864 FBtr0087627 CG18368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4360 chr3L 18453588 18453642 + 27 NA intron (FBgn0052196, intron 1 of 3) protein_coding-intron (FBgn0052196, intron 1 of 3) 509 FBgn0052196 FBgn0052196 FBtr0332868 CG32196 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3059 chr2R 19653657 19653711 + 27 NA intron (FBgn0034903, intron 7 of 13) protein_coding-intron (FBgn0034903, intron 7 of 13) 13420 FBgn0034902 FBgn0034902 FBtr0072091 CG5532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5850 chr3R 18852631 18852689 + 27 NA promoter-TSS (FBgn0039039) protein_coding-promoter-TSS (FBgn0039039) -225 FBgn0039039 FBgn0039039 FBtr0084364 lmd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6710 chrU 173589 173651 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4872 chr3R 4372912 4373027 + 27 NA Intergenic Intergenic -5361 FBgn0037594 FBgn0037594 FBtr0081872 Or85d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3457 chr3L 1123097 1123151 + 27 NA Intergenic Intergenic -22035 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3232 chr2RHet 1311543 1311606 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6821 chrU 3067333 3067387 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3257 chr2RHet 1757117 1757174 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_881 chr2L 13670412 13670500 + 27 NA TTS (FBgn0028527) protein_coding-TTS (FBgn0028527) 4931 FBgn0028527 FBgn0028527 FBtr0080527 CG18507 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5951 chr3R 21792752 21792822 + 27 NA TTS (FBgn0000206) protein_coding-TTS (FBgn0000206) 5071 FBgn0000206 FBgn0000206 FBtr0084949 boss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4732 chr3R 2559862 2559916 + 27 NA intron (FBgn0051481, intron 2 of 8) protein_coding-intron (FBgn0051481, intron 2 of 8) 7896 FBgn0051481 FBgn0051481 FBtr0089279 pb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1392 chr2L 18746563 18746672 + 27 NA Intergenic Intergenic 6259 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5297 chr3R 11542392 11542476 + 27 NA promoter-TSS (FBgn0051294) protein_coding-promoter-TSS (FBgn0051294) -127 FBgn0051294 FBgn0051294 FBtr0083198 CG31294 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1175 chr2L 16420024 16420092 + 27 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -2174 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4264 chr3L 17156173 17156227 + 27 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -3763 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4826 chr3R 3782968 3783042 + 27 NA intron (FBgn0000504, intron 2 of 4) protein_coding-intron (FBgn0000504, intron 2 of 4) 10125 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2237 chr2R 5978187 5978272 + 27 NA exon (FBgn0033484, exon 2 of 6) protein_coding-exon (FBgn0033484, exon 2 of 6) -3661 FBgn0028560 FBgn0028560 FBtr0089674 sut4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1518 chr2L 20236181 20236255 + 27 NA Intergenic Intergenic -12005 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_307 chr2L 4471732 4471786 + 27 NA intron (FBgn0011603, intron 4 of 9) protein_coding-intron (FBgn0011603, intron 4 of 9) 5265 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_705 chr2L 10874808 10874876 + 27 NA Intergenic Intergenic 4675 FBgn0032311 FBgn0032311 FBtr0080144 CG12517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_180 chr2L 2530512 2530595 + 27 NA Intergenic Intergenic -12516 FBgn0031430 FBgn0031430 FBtr0077781 CG3528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10 chr2L 261896 261959 + 27 NA exon (FBgn0031239, exon 1 of 1) protein_coding-exon (FBgn0031239, exon 1 of 1) 5578 FBgn0031239 FBgn0031239 FBtr0078142 CG17075 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_43 chr2L 805481 805535 + 27 NA Intergenic Intergenic -5069 FBgn0051658 FBgn0051658 FBtr0078008 Nnf1b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_145 chr2L 1788202 1788274 + 27 NA TTS (FBgn0045498) protein_coding-TTS (FBgn0045498) 2123 FBgn0045498 FBgn0045498 FBtr0310114 Gr22d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1617 chr2L 21339391 21339445 + 27 NA exon (FBgn0023091, exon 2 of 2) protein_coding-exon (FBgn0023091, exon 2 of 2) -5189 FBgn0032943 FBgn0032943 FBtr0273404 Tsp39D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6501 chr3R 27376547 27376700 + 27 NA intron (FBgn0039852, intron 2 of 8) protein_coding-intron (FBgn0039852, intron 2 of 8) 7738 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1924 chr2R 186576 186630 + 27 NA Intergenic Intergenic -56159 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6926 chrUextra 13201154 13201354 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6225 chr3R 24474274 24474328 + 27 NA Intergenic Intergenic 1901 FBgn0051050 FBgn0051050 FBtr0085317 CG31050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4009 chr3L 12956826 12956897 + 27 NA TTS (FBgn0041622) protein_coding-TTS (FBgn0041622) 1978 FBgn0041622 FBgn0041622 FBtr0075902 Or69a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5022 chr3R 6888069 6888126 + 27 NA Intergenic Intergenic -26045 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4678 chr3R 1779137 1779191 + 27 NA Intergenic Intergenic 7543 FBgn0040679 FBgn0040679 FBtr0078657 CG11373 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1524 chr2L 20299917 20300041 + 27 NA Intergenic Intergenic -2680 FBgn0263333 FBgn0263333 FBtr0308760 CR43414 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_901 chr2L 14038115 14038169 + 27 NA Intergenic Intergenic -2028 FBgn0028875 FBgn0028875 FBtr0309867 nAcRalpha-34E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1821 chr2L 22569080 22569134 + 27 NA intron (FBgn0058006, intron 6 of 9) protein_coding-intron (FBgn0058006, intron 6 of 9) 75420 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2982 chr2R 18326911 18326992 + 27 NA Intergenic Intergenic 11967 FBgn0034730 FBgn0034730 FBtr0071830 ppk12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4916 chr3R 5140111 5140235 + 27 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -7319 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5421 chr3R 12751450 12751504 + 27 NA Intergenic Intergenic -2522 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA Nup98-S2-pascual-garcia2017_R1_peak_417 chr2L 6263387 6263441 + 27 NA TTS (FBgn0031792) protein_coding-TTS (FBgn0031792) 1076 FBgn0031792 FBgn0031792 FBtr0079285 CG13983 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_536 chr2L 8620011 8620109 + 27 NA promoter-TSS (FBgn0051602) tRNA-promoter-TSS (FBgn0051602) 32 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_146 chr2L 1810537 1810591 + 27 NA Intergenic Intergenic 12767 FBgn0051933 FBgn0051933 FBtr0077896 CG31933 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3642 chr3L 6097833 6097937 + 27 NA intron (FBgn0005658, intron 4 of 9) protein_coding-intron (FBgn0005658, intron 4 of 9) -6682 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2789 chr2R 15005669 15005728 + 27 NA exon (FBgn0004168, exon 9 of 11) protein_coding-exon (FBgn0004168, exon 9 of 11) 9026 FBgn0034417 FBgn0034417 FBtr0100129 CG15117 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_194 chr2L 2819248 2819309 + 27 NA exon (FBgn0031464, exon 8 of 10) protein_coding-exon (FBgn0031464, exon 8 of 10) -3518 FBgn0031463 FBgn0031463 FBtr0113017 CG15400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3127 chr2R 20974595 20974649 + 27 NA exon (FBgn0003715, exon 4 of 4) protein_coding-exon (FBgn0003715, exon 4 of 4) -2779 FBgn0004919 FBgn0004919 FBtr0306330 gol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2911 chr2R 17110674 17110776 + 27 NA exon (FBgn0034606, exon 3 of 8) protein_coding-exon (FBgn0034606, exon 3 of 8) -5441 FBgn0034605 FBgn0034605 FBtr0110814 CG15661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5932 chr3R 21670816 21670876 + 27 NA Intergenic Intergenic 6167 FBgn0040602 FBgn0040602 FBtr0084913 CG14545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_769 chr2L 11964725 11964779 + 27 NA intron (FBgn0263019, intron 1 of 1) ncRNA-intron (FBgn0263019, intron 1 of 2) 6342 FBgn0263019 FBgn0263019 FBtr0306898 CR43314 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_235 chr2L 3592259 3592317 + 27 NA Intergenic Intergenic -1987 FBgn0264371 FBgn0264371 FBtr0332223 CR43823 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2175 chr2R 4911776 4911844 + 27 NA intron (FBgn0033365, intron 2 of 7) protein_coding-intron (FBgn0033365, intron 2 of 8) 6450 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4359 chr3L 18410176 18410230 + 27 NA Intergenic Intergenic -18668 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2250 chr2R 6229041 6229095 + 27 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 10598 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_632 chr2L 9403840 9403973 + 27 NA intron (FBgn0085395, intron 2 of 10) protein_coding-intron (FBgn0085395, intron 2 of 11) -5918 FBgn0032115 FBgn0032115 FBtr0079813 CG4438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3448 chr3L 1073373 1073427 + 27 NA intron (FBgn0004870, intron 1 of 3) protein_coding-intron (FBgn0004870, intron 1 of 3) 27689 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3950 chr3L 12059196 12059327 + 27 NA Intergenic Intergenic -1302 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4923 chr3R 5150619 5150673 + 27 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) 3154 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4589 chr3LHet 2493881 2493935 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2537 chr2R 10632085 10632139 + 27 NA intron (FBgn0033958, intron 1 of 4) protein_coding-intron (FBgn0033958, intron 1 of 4) 722 FBgn0033958 FBgn0033958 FBtr0087476 CG12858 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1294 chr2L 17628829 17628891 + 27 NA TTS (FBgn0262356) protein_coding-TTS (FBgn0262356) 1001 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4938 chr3R 5677319 5677373 + 27 NA intron (FBgn0037766, intron 2 of 2) protein_coding-intron (FBgn0037766, intron 2 of 2) 16496 FBgn0037766 FBgn0037766 FBtr0330082 Teh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_889 chr2L 13766830 13766921 + 27 NA Intergenic Intergenic -4212 FBgn0028541 FBgn0028541 FBtr0080532 TM9SF4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1563 chr2L 20600784 20600838 + 27 NA Intergenic Intergenic 3385 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1095 chr2L 15529554 15529618 + 27 NA Intergenic Intergenic 7148 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_932 chr2L 14321853 14321995 + 27 NA exon (FBgn0261563, exon 8 of 16) protein_coding-exon (FBgn0261563, exon 8 of 16) -6505 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2507 chr2R 10210042 10210096 + 27 NA intron (FBgn0085408, intron 2 of 9) protein_coding-intron (FBgn0085408, intron 2 of 9) -9831 FBgn0085408 FBgn0085408 FBtr0112616 Shroom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_103 chr2L 1365289 1365360 + 27 NA Intergenic Intergenic -2765 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3345 chr2RHet 2201384 2201439 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5086 chr3R 7987441 7987524 + 27 NA Intergenic Intergenic -3165 FBgn0037993 FBgn0037993 FBtr0082549 dpr15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6078 chr3R 23149412 23149469 + 27 NA Intergenic Intergenic -1393 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_49 chr2L 918977 919031 + 27 NA Intergenic Intergenic -3789 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5805 chr3R 17636776 17636830 + 27 NA intron (FBgn0013759, intron 8 of 17) protein_coding-intron (FBgn0013759, intron 8 of 17) 11561 FBgn0013759 FBgn0013759 FBtr0084162 CASK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4567 chr3LHet 1193064 1193168 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2166 chr2R 4852760 4852828 + 27 NA exon (FBgn0033358, exon 2 of 6) protein_coding-exon (FBgn0033358, exon 2 of 6) 2893 FBgn0033358 FBgn0033358 FBtr0088671 CG8216 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_596 chr2L 8869835 8869917 + 27 NA Intergenic Intergenic 3109 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4808 chr3R 3430214 3430268 + 27 NA intron (FBgn0083963, intron 2 of 12) protein_coding-intron (FBgn0083963, intron 2 of 12) 34915 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3222 chr2RHet 1287452 1287551 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1092 chr2L 15516105 15516253 + 27 NA Intergenic Intergenic -6259 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5308 chr3R 11599965 11600082 + 27 NA promoter-TSS (FBgn0038358) protein_coding-promoter-TSS (FBgn0038358) -74 FBgn0038358 FBgn0038358 FBtr0083170 CG4525 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5157 chr3R 8902385 8902494 + 27 NA exon (FBgn0004666, exon 8 of 8) protein_coding-exon (FBgn0004666, exon 8 of 8) -9507 FBgn0262365 FBgn0262365 FBtr0304647 CG43063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3008 chr2R 18843832 18843886 + 27 NA Intergenic Intergenic -2536 FBgn0052835 FBgn0052835 FBtr0308941 CR32835 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6298 chr3R 25234087 25234186 + 27 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -71284 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2325 chr2R 7423620 7423674 + 27 NA Intergenic Intergenic -8259 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4046 chr3L 13650042 13650110 + 27 NA intron (FBgn0264001, intron 2 of 11) protein_coding-intron (FBgn0264001, intron 2 of 12) 36139 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3656 chr3L 6270584 6270670 + 27 NA TTS (FBgn0262787) protein_coding-TTS (FBgn0262787) 1827 FBgn0262787 FBgn0262787 FBtr0305900 CG43168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6700 chrU 129354 129422 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_370 chr2L 5469944 5470001 + 27 NA Intergenic Intergenic 8331 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2872 chr2R 16357237 16357407 + 27 NA intron (FBgn0086604, intron 13 of 19) protein_coding-intron (FBgn0086604, intron 14 of 15) -33798 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6206 chr3R 24267035 24267111 + 27 NA intron (FBgn0039584, intron 1 of 6) protein_coding-intron (FBgn0039584, intron 1 of 6) 23143 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1222 chr2L 16999468 16999581 + 27 NA Intergenic Intergenic 13530 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2514 chr2R 10323130 10323184 + 27 NA promoter-TSS (FBgn0261613) protein_coding-promoter-TSS (FBgn0261613) -247 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1237 chr2L 17083068 17083128 + 27 NA Intergenic Intergenic -2552 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5200 chr3R 9685808 9685890 + 27 NA Intergenic Intergenic -4673 FBgn0038186 FBgn0038186 FBtr0082881 CG14362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_320 chr2L 4640986 4641040 + 27 NA promoter-TSS (FBgn0083938) protein_coding-promoter-TSS (FBgn0083938) -283 FBgn0083938 FBgn0083938 FBtr0110769 BG642163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3504 chr3L 2031817 2031887 + 27 NA Intergenic Intergenic 4861 FBgn0085288 FBgn0085288 FBtr0300030 CG34259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6546 chr3RHet 413213 413267 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3706 chr3L 6987203 6987374 + 27 NA exon (FBgn0045759, exon 4 of 4) protein_coding-exon (FBgn0045759, exon 4 of 4) 3566 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6156 chr3R 23880777 23880924 + 27 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 28516 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3681 chr3L 6785878 6785990 + 27 NA exon (FBgn0086680, exon 1 of 1) protein_coding-exon (FBgn0086680, exon 1 of 1) 2676 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2063 chr2R 3307287 3307363 + 27 NA exon (FBgn0003460, exon 1 of 7) protein_coding-exon (FBgn0003460, exon 1 of 7) 788 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1305 chr2L 17781865 17781929 + 27 NA Intergenic Intergenic -10515 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2252 chr2R 6230188 6230242 + 27 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 9451 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_700 chr2L 10816106 10816160 + 27 NA exon (FBgn0011676, exon 11 of 19) protein_coding-exon (FBgn0011676, exon 11 of 19) -2990 FBgn0032303 FBgn0032303 FBtr0080139 CG6508 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2846 chr2R 15911389 15911488 + 27 NA Intergenic Intergenic -18946 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_894 chr2L 13936441 13936540 + 27 NA intron (FBgn0032536, intron 7 of 8) protein_coding-intron (FBgn0032536, intron 7 of 8) -1800 FBgn0032538 FBgn0032538 FBtr0080558 CG16885 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2200 chr2R 5414999 5415064 + 27 NA exon (FBgn0259246, exon 10 of 22) protein_coding-exon (FBgn0259246, exon 10 of 22) 20609 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4555 chr3LHet 873771 873825 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4316 chr3L 17679796 17679850 + 27 NA Intergenic Intergenic -3292 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3996 chr3L 12690047 12690101 + 27 NA exon (FBgn0014343, exon 2 of 5) protein_coding-exon (FBgn0014343, exon 2 of 5) 3335 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5295 chr3R 11527091 11527145 + 27 NA Intergenic Intergenic -3299 FBgn0038354 FBgn0038354 FBtr0083165 CG5404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1823 chr2L 22583136 22583241 + 27 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 61339 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5851 chr3R 18861331 18861397 + 27 NA promoter-TSS (FBgn0039040) protein_coding-promoter-TSS (FBgn0039040) -79 FBgn0039040 FBgn0039040 FBtr0084362 CG13833 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6024 chr3R 22490508 22490585 + 27 NA intron (FBgn0250908, intron 2 of 8) protein_coding-intron (FBgn0250908, intron 2 of 8) 8378 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7150 chrX 12405047 12405118 + 27 NA intron (FBgn0030396, intron 1 of 3) protein_coding-intron (FBgn0030396, intron 1 of 3) 13348 FBgn0086047 FBgn0086047 FBtr0114323 snoRNA:Me18S-G894 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4551 chr3LHet 629267 629344 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6860 chrUextra 29538 29596 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_59 chr2L 986601 986655 + 27 NA Intergenic Intergenic 40262 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2645 chr2R 12390417 12390492 + 27 NA intron (FBgn0011260, intron 1 of 14) protein_coding-intron (FBgn0011260, intron 1 of 14) -3520 FBgn0034133 FBgn0034133 FBtr0087126 CG7813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5853 chr3R 18901009 18901066 + 27 NA exon (FBgn0039054, exon 9 of 11) protein_coding-exon (FBgn0039054, exon 9 of 11) -8056 FBgn0039048 FBgn0039048 FBtr0303508 CG17111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3934 chr3L 11751566 11751620 + 27 NA intron (FBgn0036202, intron 2 of 7) protein_coding-intron (FBgn0036202, intron 2 of 7) 7188 FBgn0041231 FBgn0041231 FBtr0076118 Gr68a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2532 chr2R 10578003 10578093 + 27 NA intron (FBgn0020269, intron 1 of 5) protein_coding-intron (FBgn0020269, intron 1 of 5) -12407 FBgn0050480 FBgn0050480 FBtr0087478 CG30480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1666 chr2L 21787352 21787406 + 27 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) -3314 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6483 chr3R 27179153 27179229 + 27 NA exon (FBgn0085376, exon 6 of 17) protein_coding-exon (FBgn0085376, exon 6 of 17) -18958 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_826 chr2L 12796374 12796446 + 27 NA Intergenic Intergenic 11930 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6133 chr3R 23662258 23662312 + 27 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) -8526 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6479 chr3R 27129162 27129219 + 27 NA exon (FBgn0039840, exon 2 of 2) protein_coding-exon (FBgn0039840, exon 2 of 2) 1772 FBgn0039840 FBgn0039840 FBtr0085766 CG11340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_398 chr2L 5843677 5843731 + 27 NA intron (FBgn0085410, intron 1 of 9) protein_coding-intron (FBgn0085410, intron 1 of 9) 18910 FBgn0085410 FBgn0085410 FBtr0330222 TrissinR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6704 chrU 137229 137306 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3106 chr2R 20572772 20572834 + 27 NA promoter-TSS (FBgn0035049) protein_coding-promoter-TSS (FBgn0035049) 2075 FBgn0035049 FBgn0035049 FBtr0304006 Mmp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_754 chr2L 11771605 11771663 + 27 NA Intergenic Intergenic -16827 FBgn0032374 FBgn0032374 FBtr0300370 CG14931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1991 chr2R 1630135 1630222 + 27 NA Intergenic Intergenic -11855 FBgn0022288 FBgn0022288 FBtr0086043 l(2)09851 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2447 chr2R 9237049 9237103 + 27 NA Intergenic Intergenic 4897 FBgn0033828 FBgn0033828 FBtr0087721 CG17048 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3901 chr3L 10898898 10898964 + 27 NA Intergenic Intergenic -6708 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6844 chrU 5944583 5944643 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4834 chr3R 3960176 3960230 + 27 NA Intergenic Intergenic 5125 FBgn0051583 FBgn0051583 FBtr0081814 tRNA:N5:84F tRNA Nup98-S2-pascual-garcia2017_R1_peak_1321 chr2L 17885285 17885354 + 27 NA Intergenic Intergenic -8493 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_363 chr2L 5414828 5414910 + 27 NA intron (FBgn0016660, intron 5 of 5) protein_coding-intron (FBgn0016660, intron 5 of 5) 10527 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5417 chr3R 12719445 12719595 + 27 NA intron (FBgn0263595, intron 1 of 1) ncRNA-intron (FBgn0263610, intron 1 of 6) 1388 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6407 chr3R 26345357 26345411 + 27 NA exon (FBgn0027654, exon 4 of 5) protein_coding-exon (FBgn0027654, exon 4 of 5) 4838 FBgn0039784 FBgn0039784 FBtr0085657 CG9698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7214 chrX 16070331 16070385 + 27 NA Intergenic Intergenic 14966 FBgn0262283 FBgn0262283 FBtr0304409 mir-985 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4573 chr3LHet 1350564 1350629 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1507 chr2L 20116829 20116883 + 27 NA Intergenic Intergenic -12766 FBgn0032851 FBgn0032851 FBtr0089388 CG13970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3490 chr3L 1828100 1828154 + 27 NA intron (FBgn0035279, intron 1 of 2) protein_coding-intron (FBgn0035279, intron 1 of 2) 815 FBgn0035279 FBgn0035279 FBtr0299561 Cpr62Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3432 chr3L 626163 626280 + 27 NA Intergenic Intergenic -2249 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1304 chr2L 17746165 17746219 + 27 NA intron (FBgn0015609, intron 3 of 23) protein_coding-intron (FBgn0015609, intron 1 of 21) 6154 FBgn0015609 FBgn0015609 FBtr0100316 CadN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3228 chr2RHet 1300996 1301050 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1623 chr2L 21375474 21375528 + 27 NA exon (FBgn0032945, exon 2 of 3) protein_coding-exon (FBgn0032945, exon 2 of 3) 4274 FBgn0032945 FBgn0032945 FBtr0081517 CG8665 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_171 chr2L 2317678 2317732 + 27 NA intron (FBgn0031414, intron 1 of 13) protein_coding-intron (FBgn0031413, intron 2 of 5) 6025 FBgn0031414 FBgn0031414 FBtr0330694 eys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1282 chr2L 17528048 17528113 + 27 NA exon (FBgn0032648, exon 4 of 4) protein_coding-exon (FBgn0032648, exon 4 of 4) 990 FBgn0032648 FBgn0032648 FBtr0303652 CG15144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1739 chr2L 22073474 22073540 + 27 NA TTS (FBgn0051702) protein_coding-TTS (FBgn0051702) 2354 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1320 chr2L 17881950 17882004 + 27 NA Intergenic Intergenic -6730 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3159 chr2RHet 306319 306373 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6095 chr3R 23306804 23306858 + 27 NA TTS (FBgn0039519) protein_coding-TTS (FBgn0039519) 2432 FBgn0039519 FBgn0039519 FBtr0085183 Cyp6a18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4398 chr3L 19786669 19786769 + 27 NA promoter-TSS (FBgn0261283) protein_coding-promoter-TSS (FBgn0261283) -50 FBgn0261360 FBgn0261360 FBtr0302277 CG42637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2794 chr2R 15141799 15141853 + 27 NA Intergenic Intergenic -1136 FBgn0053453 FBgn0053453 FBtr0086564 CG33453 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3271 chr2RHet 1888652 1888728 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4445 chr3L 21689121 21689175 + 27 NA intron (FBgn0052447, intron 1 of 2) protein_coding-intron (FBgn0052447, intron 1 of 2) 10317 FBgn0052447 FBgn0052447 FBtr0078461 CG32447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6289 chr3R 25173009 25173080 + 27 NA Intergenic Intergenic -27708 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2125 chr2R 4351427 4351481 + 27 NA exon (FBgn0050359, exon 3 of 6) protein_coding-exon (FBgn0050359, exon 3 of 6) 1147 FBgn0050359 FBgn0050359 FBtr0300953 Mal-A5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5701 chr3R 16160847 16160937 + 27 NA Intergenic Intergenic -4097 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1562 chr2L 20593873 20593961 + 27 NA Intergenic Intergenic 10279 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3154 chr2RHet 145489 145543 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4506 chr3L 23807938 23807992 + 27 NA Intergenic Intergenic 30634 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_578 chr2L 8808045 8808139 + 27 NA Intergenic Intergenic -1308 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5578 chr3R 14695825 14695896 + 27 NA Intergenic Intergenic -5570 FBgn0038654 FBgn0038654 FBtr0083695 CG14298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4988 chr3R 6433303 6433393 + 27 NA intron (FBgn0001235, intron 1 of 5) protein_coding-intron (FBgn0001235, intron 1 of 12) -1956 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2472 chr2R 9553018 9553072 + 27 NA exon (FBgn0033863, exon 1 of 1) protein_coding-exon (FBgn0033863, exon 1 of 1) 426 FBgn0033863 FBgn0033863 FBtr0087626 CG13337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3655 chr3L 6269624 6269711 + 27 NA exon (FBgn0262787, exon 2 of 2) protein_coding-exon (FBgn0262787, exon 2 of 2) 867 FBgn0262787 FBgn0262787 FBtr0305900 CG43168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4665 chr3R 1596346 1596400 + 27 NA intron (FBgn0027608, intron 1 of 8) protein_coding-intron (FBgn0027608, intron 2 of 8) -8658 FBgn0037374 FBgn0037374 FBtr0078625 jagn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7074 chrX 6004091 6004145 + 27 NA intron (FBgn0264386, intron 24 of 25) protein_coding-intron (FBgn0264386, intron 24 of 25) 16216 FBgn0029843 FBgn0029843 FBtr0070873 Nep1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2029 chr2R 2686587 2686641 + 27 NA promoter-TSS (FBgn0085421) protein_coding-promoter-TSS (FBgn0085421) -8503 FBgn0014028 FBgn0014028 FBtr0086156 SdhB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3450 chr3L 1100071 1100181 + 27 NA exon (FBgn0004870, exon 1 of 4) protein_coding-exon (FBgn0004870, exon 1 of 4) 963 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3039 chr2R 19356066 19356121 + 27 NA intron (FBgn0264339, intron 3 of 13) protein_coding-intron (FBgn0264339, intron 3 of 13) 3205 FBgn0034865 FBgn0034865 FBtr0072021 Or59b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3038 chr2R 19353802 19353864 + 27 NA intron (FBgn0264339, intron 2 of 13) protein_coding-intron (FBgn0264339, intron 2 of 13) 5465 FBgn0034865 FBgn0034865 FBtr0072021 Or59b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6017 chr3R 22464495 22464549 + 27 NA Intergenic Intergenic -1226 FBgn0039444 FBgn0039444 FBtr0085035 TwdlD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1071 chr2L 15375446 15375508 + 27 NA Intergenic Intergenic -13850 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1950 chr2R 825142 825251 + 27 NA Intergenic Intergenic -11976 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1380 chr2L 18528093 18528182 + 27 NA exon (FBgn0032685, exon 3 of 9) protein_coding-exon (FBgn0032685, exon 3 of 9) 10644 FBgn0032685 FBgn0032685 FBtr0081069 CG10211 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6573 chr3RHet 1593975 1594032 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1630 chr2L 21398083 21398173 + 27 NA Intergenic Intergenic -5987 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_690 chr2L 10692366 10692473 + 27 NA TTS (FBgn0032285) protein_coding-TTS (FBgn0032285) 1684 FBgn0032285 FBgn0032285 FBtr0080127 CG17108 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1946 chr2R 791457 791513 + 27 NA Intergenic Intergenic -45687 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6659 chr4 1026542 1026601 + 27 NA exon (FBgn0019650, exon 8 of 9) protein_coding-exon (FBgn0019650, exon 8 of 9) 16220 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1212 chr2L 16927303 16927359 + 27 NA Intergenic Intergenic -17022 FBgn0026150 FBgn0026150 FBtr0304931 ApepP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5905 chr3R 20554852 20554910 + 27 NA intron (FBgn0004885, intron 2 of 13) protein_coding-intron (FBgn0004885, intron 2 of 13) 5333 FBgn0086059 FBgn0086059 FBtr0114335 snoRNA:Me18S-C1280 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6127 chr3R 23613522 23613600 + 27 NA intron (FBgn0085382, intron 7 of 11) protein_coding-intron (FBgn0085382, intron 7 of 11) 51299 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3237 chr2RHet 1416886 1416981 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_65 chr2L 1025107 1025182 + 27 NA TTS (FBgn0031295) protein_coding-TTS (FBgn0031295) 1746 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3152 chr2RHet 137086 137140 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1159 chr2L 16209194 16209260 + 27 NA Intergenic Intergenic -2232 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2615 chr2R 12058785 12058849 + 27 NA promoter-TSS (FBgn0034084) protein_coding-promoter-TSS (FBgn0034084) -451 FBgn0034084 FBgn0034084 FBtr0087249 CG8435 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6839 chrU 5508948 5509013 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1877 chr2L 22894135 22894196 + 27 NA intron (FBgn0250907, intron 8 of 8) protein_coding-intron (FBgn0250907, intron 8 of 8) 19631 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3149 chr2RHet 117349 117411 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2976 chr2R 18226628 18226682 + 27 NA exon (FBgn0034720, exon 10 of 14) protein_coding-exon (FBgn0034720, exon 10 of 14) 6024 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5232 chr3R 10264607 10264661 + 27 NA intron (FBgn0086901, intron 3 of 15) protein_coding-intron (FBgn0086901, intron 2 of 14) 20319 FBgn0085417 FBgn0085417 FBtr0301081 CG34388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1560 chr2L 20589587 20589641 + 27 NA Intergenic Intergenic 14582 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2316 chr2R 7375884 7375967 + 27 NA intron (FBgn0001269, intron 1 of 4) protein_coding-intron (FBgn0001269, intron 2 of 5) 12715 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_670 chr2L 10134870 10134942 + 27 NA intron (FBgn0262032, intron 1 of 6) protein_coding-intron (FBgn0262032, intron 1 of 6) 2646 FBgn0262032 FBgn0262032 FBtr0303928 CG42843 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3708 chr3L 6991810 6991903 + 27 NA promoter-TSS (FBgn0260660) protein_coding-promoter-TSS (FBgn0260660) -87 FBgn0260660 FBgn0260660 FBtr0308094 mp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5518 chr3R 13915181 13915247 + 27 NA Intergenic Intergenic -1311 FBgn0003499 FBgn0003499 FBtr0301615 sr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5944 chr3R 21751272 21751326 + 27 NA exon (FBgn0039396, exon 4 of 7) protein_coding-exon (FBgn0039396, exon 4 of 7) -3080 FBgn0039395 FBgn0039395 FBtr0084984 CG14546 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3376 chr2RHet 2357097 2357151 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3270 chr2RHet 1885831 1885899 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2813 chr2R 15519468 15519522 + 27 NA promoter-TSS (FBgn0003435) protein_coding-promoter-TSS (FBgn0003435) -3289 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6320 chr3R 25396671 25396725 + 27 NA Intergenic Intergenic 14589 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2664 chr2R 12604539 12604595 + 27 NA intron (FBgn0050463, intron 1 of 11) protein_coding-intron (FBgn0050463, intron 1 of 11) 20788 FBgn0262564 FBgn0262564 FBtr0304892 CG43104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6332 chr3R 25493509 25493563 + 27 NA exon (FBgn0039676, exon 2 of 6) protein_coding-exon (FBgn0039676, exon 2 of 6) 1063 FBgn0039676 FBgn0039676 FBtr0332443 ppk20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5781 chr3R 17259880 17259934 + 27 NA promoter-TSS (FBgn0008651) protein_coding-promoter-TSS (FBgn0008651) -52 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2127 chr2R 4356579 4356642 + 27 NA TTS (FBgn0033296) protein_coding-TTS (FBgn0033296) 2544 FBgn0033296 FBgn0033296 FBtr0088757 Mal-A7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4031 chr3L 13396821 13396897 + 27 NA Intergenic Intergenic -2634 FBgn0002573 FBgn0002573 FBtr0075862 sens protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1992 chr2R 1637283 1637360 + 27 NA Intergenic Intergenic -4712 FBgn0022288 FBgn0022288 FBtr0086043 l(2)09851 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3470 chr3L 1390595 1390649 + 27 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -7073 FBgn0011851 FBgn0011851 FBtr0072685 tRNA:E4:62Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_1536 chr2L 20474885 20474998 + 27 NA Intergenic Intergenic -1602 FBgn0262878 FBgn0262878 FBtr0306287 CG43233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1986 chr2R 1596367 1596437 + 27 NA intron (FBgn0000099, intron 2 of 4) protein_coding-intron (FBgn0000099, intron 5 of 7) 6797 FBgn0259978 FBgn0259978 FBtr0307530 vlc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3248 chr2RHet 1678640 1678698 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3713 chr3L 7047439 7047526 + 27 NA TTS (FBgn0260660) protein_coding-TTS (FBgn0260660) -11932 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1059 chr2L 15227615 15227697 + 27 NA Intergenic Intergenic 12434 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6406 chr3R 26342384 26342438 + 27 NA TTS (FBgn0027654) protein_coding-TTS (FBgn0027654) 1865 FBgn0039784 FBgn0039784 FBtr0085657 CG9698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6176 chr3R 24040102 24040157 + 27 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 49215 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_39 chr2L 786287 786357 + 27 NA TTS (FBgn0031279) protein_coding-TTS (FBgn0031279) 1986 FBgn0031279 FBgn0031279 FBtr0078007 CG3544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3517 chr3L 2328824 2328878 + 27 NA intron (FBgn0035331, intron 2 of 4) protein_coding-intron (FBgn0035331, intron 2 of 4) 6158 FBgn0035331 FBgn0035331 FBtr0330187 DmsR-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5227 chr3R 10140309 10140368 + 27 NA promoter-TSS (FBgn0013767) protein_coding-promoter-TSS (FBgn0013767) -238 FBgn0013767 FBgn0013767 FBtr0082927 Crz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2659 chr2R 12555498 12555614 + 27 NA promoter-TSS (FBgn0024315) protein_coding-promoter-TSS (FBgn0024315) -2275 FBgn0085486 FBgn0085486 FBtr0112763 CG34457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1413 chr2L 19084721 19084775 + 27 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -5720 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5406 chr3R 12628628 12628695 + 27 NA Intergenic Intergenic 14628 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5110 chr3R 8354353 8354423 + 27 NA exon (FBgn0028374, exon 3 of 3) protein_coding-exon (FBgn0028374, exon 3 of 3) 2478 FBgn0028374 FBgn0028374 FBtr0082639 hug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6819 chrU 2703328 2703383 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5078 chr3R 7853554 7853618 + 27 NA TTS (FBgn0051358) protein_coding-TTS (FBgn0051358) 3893 FBgn0260230 FBgn0260230 FBtr0300639 CG42504 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3672 chr3L 6661086 6661146 + 27 NA promoter-TSS (FBgn0041232) protein_coding-promoter-TSS (FBgn0041232) -200 FBgn0041232 FBgn0041232 FBtr0300026 Gr65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_539 chr2L 8627167 8627318 + 27 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 7214 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5432 chr3R 12795480 12795534 + 27 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -5419 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6424 chr3R 26723438 26723492 + 27 NA exon (FBgn0015032, exon 3 of 8) protein_coding-exon (FBgn0015032, exon 3 of 8) 3782 FBgn0015032 FBgn0015032 FBtr0085712 Cyp4c3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4174 chr3L 15860647 15860701 + 27 NA exon (FBgn0036542, exon 8 of 11) protein_coding-exon (FBgn0036542, exon 8 of 11) -11197 FBgn0036541 FBgn0036541 FBtr0075533 CG12486 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3705 chr3L 6983650 6983726 + 27 NA promoter-TSS (FBgn0045759) protein_coding-promoter-TSS (FBgn0045759) -34 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7230 chrX 17617082 17617136 + 27 NA promoter-TSS (FBgn0261570) protein_coding-promoter-TSS (FBgn0261570) 12931 FBgn0261570 FBgn0261570 FBtr0302833 CG42684 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3897 chr3L 10754028 10754152 + 27 NA Intergenic Intergenic -11002 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6264 chr3R 24777590 24777686 + 27 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 18438 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2643 chr2R 12357726 12357780 + 27 NA Intergenic Intergenic 2039 FBgn0261293 FBgn0261293 FBtr0091479 CheB53b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1662 chr2L 21773890 21773980 + 27 NA exon (FBgn0051612, exon 2 of 4) protein_coding-exon (FBgn0051612, exon 2 of 4) 10130 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3179 chr2RHet 526486 526598 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3272 chr2RHet 1892121 1892175 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6222 chr3R 24417581 24417668 + 27 NA Intergenic Intergenic -1586 FBgn0263388 FBgn0263388 FBtr0309076 CG43440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2653 chr2R 12448792 12448862 + 27 NA exon (FBgn0034136, exon 3 of 8) protein_coding-exon (FBgn0034136, exon 3 of 8) 3936 FBgn0034136 FBgn0034136 FBtr0330002 DAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1316 chr2L 17837397 17837454 + 27 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 1 of 13) -24753 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4147 chr3L 15359538 15359592 + 27 NA Intergenic Intergenic 29773 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1755 chr2L 22155101 22155201 + 27 NA exon (FBgn0261802, exon 6 of 8) protein_coding-exon (FBgn0261802, exon 6 of 8) 3397 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2275 chr2R 6560928 6560982 + 27 NA exon (FBgn0024836, exon 1 of 6) protein_coding-exon (FBgn0024836, exon 1 of 6) 105 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2887 chr2R 16644039 16644109 + 27 NA Intergenic Intergenic 3964 FBgn0085231 FBgn0085231 FBtr0112395 CG34202 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3193 chr2RHet 606260 606314 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4962 chr3R 6019034 6019107 + 27 NA intron (FBgn0004575, intron 1 of 12) protein_coding-intron (FBgn0004575, intron 1 of 12) 2659 FBgn0004575 FBgn0004575 FBtr0100472 Syn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2026 chr2R 2653119 2653173 + 27 NA exon (FBgn0085421, exon 11 of 17) protein_coding-exon (FBgn0085421, exon 11 of 17) 4117 FBgn0085421 FBgn0085421 FBtr0329851 Epac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_840 chr2L 12918608 12918662 + 27 NA exon (FBgn0040509, exon 6 of 12) protein_coding-exon (FBgn0040509, exon 6 of 12) 1821 FBgn0040509 FBgn0040509 FBtr0080414 ACXB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1367 chr2L 18315165 18315266 + 27 NA Intergenic Intergenic -4886 FBgn0000636 FBgn0000636 FBtr0112804 Fas3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1832 chr2L 22606616 22606670 + 27 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 37884 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6313 chr3R 25369005 25369151 + 27 NA Intergenic Intergenic 8720 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2678 chr2R 13053713 13053785 + 27 NA exon (FBgn0034204, exon 2 of 2) protein_coding-exon (FBgn0034204, exon 2 of 2) 399 FBgn0034204 FBgn0034204 FBtr0086997 CG10953 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3458 chr3L 1139748 1139802 + 27 NA TTS (FBgn0025525) protein_coding-TTS (FBgn0025525) 37501 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7041 chrX 4157027 4157081 + 27 NA Intergenic Intergenic -3076 FBgn0029701 FBgn0029701 FBtr0070646 CG12691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6231 chr3R 24544657 24544712 + 27 NA exon (FBgn0027655, exon 16 of 29) protein_coding-exon (FBgn0027655, exon 16 of 29) 22720 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3339 chr2RHet 2157532 2157632 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1198 chr2L 16699112 16699210 + 27 NA TTS (FBgn0262386) pre_miRNA-TTS (FBgn0262386) 403 FBgn0262413 FBgn0262413 FBtr0304346 mir-9b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2742 chr2R 14139552 14139606 + 27 NA Intergenic Intergenic 19311 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1410 chr2L 19078532 19078592 + 27 NA TTS (FBgn0002023) protein_coding-TTS (FBgn0002023) 466 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4765 chr3R 2843004 2843074 + 27 NA Intergenic Intergenic -35018 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1842 chr2L 22651132 22651196 + 27 NA Intergenic Intergenic -2083 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2436 chr2R 9142835 9142890 + 27 NA Intergenic Intergenic -1020 FBgn0033819 FBgn0033819 FBtr0087756 CG4714 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5645 chr3R 15551099 15551153 + 27 NA Intergenic Intergenic -5555 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2501 chr2R 10096075 10096132 + 27 NA intron (FBgn0005613, intron 1 of 2) protein_coding-intron (FBgn0005613, intron 1 of 2) 3811 FBgn0005613 FBgn0005613 FBtr0087576 Sox15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3890 chr3L 10717996 10718050 + 27 NA Intergenic Intergenic -28046 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3828 chr3L 9518830 9518884 + 27 NA promoter-TSS (FBgn0053700) protein_coding-promoter-TSS (FBgn0053700) -213 FBgn0053700 FBgn0053700 FBtr0301069 CG33700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1207 chr2L 16873103 16873205 + 27 NA intron (FBgn0051781, intron 1 of 1) ncRNA-intron (FBgn0051781, intron 1 of 1) 3667 FBgn0051781 FBgn0051781 FBtr0308928 CR31781 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_749 chr2L 11686889 11686966 + 27 NA Intergenic Intergenic -7929 FBgn0032372 FBgn0032372 FBtr0080254 CG4988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1072 chr2L 15376211 15376265 + 27 NA Intergenic Intergenic -14611 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1414 chr2L 19088946 19089011 + 27 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -9950 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3097 chr2R 20471172 20471231 + 27 NA intron (FBgn0020521, intron 1 of 7) protein_coding-intron (FBgn0020521, intron 2 of 8) 2415 FBgn0020521 FBgn0020521 FBtr0301502 pio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5017 chr3R 6798010 6798098 + 27 NA Intergenic Intergenic -21151 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6712 chrU 181536 181590 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1119 chr2L 15815364 15815462 + 27 NA Intergenic Intergenic -3272 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1371 chr2L 18359789 18359849 + 27 NA promoter-TSS (FBgn0011559) protein_coding-promoter-TSS (FBgn0011559) -793 FBgn0011559 FBgn0011559 FBtr0081054 Acp36DE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1256 chr2L 17238854 17238909 + 27 NA promoter-TSS (FBgn0040987) protein_coding-promoter-TSS (FBgn0040987) -478 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5209 chr3R 9770818 9770872 + 27 NA exon (FBgn0038189, exon 2 of 2) protein_coding-exon (FBgn0038189, exon 2 of 2) 689 FBgn0038189 FBgn0038189 FBtr0082878 Art6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4675 chr3R 1694529 1694583 + 27 NA intron (FBgn0083949, intron 14 of 16) protein_coding-intron (FBgn0083949, intron 14 of 16) -7537 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1639 chr2L 21666124 21666195 + 27 NA exon (FBgn0032957, exon 9 of 11) protein_coding-exon (FBgn0032957, exon 9 of 11) 7424 FBgn0032956 FBgn0032956 FBtr0085900 Cul-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4129 chr3L 15036229 15036319 + 27 NA promoter-TSS (FBgn0036465) protein_coding-promoter-TSS (FBgn0036465) -604 FBgn0036465 FBgn0036465 FBtr0075669 Rpn12R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4662 chr3R 1541806 1541927 + 27 NA exon (FBgn0004878, exon 1 of 4) protein_coding-exon (FBgn0004878, exon 1 of 4) 1156 FBgn0004878 FBgn0004878 FBtr0078725 cas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_968 chr2L 14547274 14547382 + 27 NA TTS (FBgn0250844) protein_coding-TTS (FBgn0250844) 1747 FBgn0250844 FBgn0250844 FBtr0080662 CG4218 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6065 chr3R 23026860 23026915 + 27 NA Intergenic Intergenic -7171 FBgn0004197 FBgn0004197 FBtr0085128 Ser protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5047 chr3R 7188430 7188505 + 27 NA intron (FBgn0004595, intron 2 of 7) protein_coding-intron (FBgn0004595, intron 2 of 7) -9614 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1944 chr2R 691826 691880 + 27 NA Intergenic Intergenic -15706 FBgn0250830 FBgn0250830 FBtr0111273 CG12547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2045 chr2R 3060917 3060971 + 27 NA intron (FBgn0003090, intron 1 of 5) protein_coding-intron (FBgn0003090, intron 1 of 5) -2447 FBgn0033149 FBgn0033149 FBtr0089045 CG11060 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5169 chr3R 9155522 9155642 + 27 NA exon (FBgn0038139, exon 8 of 8) protein_coding-exon (FBgn0038139, exon 8 of 8) 4303 FBgn0038139 FBgn0038139 FBtr0100149 CG8795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4120 chr3L 14862576 14862690 + 27 NA exon (FBgn0036454, exon 10 of 19) protein_coding-exon (FBgn0036454, exon 10 of 19) 24883 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3197 chr2RHet 702121 702249 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6786 chrU 1932211 1932265 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6694 chrU 81134 81188 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4332 chr3L 18015194 18015257 + 27 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -18192 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5533 chr3R 14132519 14132573 + 27 NA intron (FBgn0038603, intron 4 of 7) protein_coding-intron (FBgn0038603, intron 4 of 7) -3975 FBgn0038602 FBgn0038602 FBtr0083593 CG7126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6169 chr3R 23975809 23975924 + 27 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 3264 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_785 chr2L 12343579 12343633 + 27 NA promoter-TSS (FBgn0262475) protein_coding-promoter-TSS (FBgn0262475) 660 FBgn0264361 FBgn0264361 FBtr0332235 CG43813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6209 chr3R 24281554 24281623 + 27 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) -28691 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6455 chr3R 26918107 26918225 + 27 NA exon (FBgn0039816, exon 2 of 4) protein_coding-exon (FBgn0039816, exon 2 of 4) 4874 FBgn0039816 FBgn0039816 FBtr0085741 CG11317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1722 chr2L 22022822 22022938 + 27 NA exon (FBgn0028979, exon 2 of 3) protein_coding-exon (FBgn0028979, exon 2 of 3) 2845 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_709 chr2L 11073641 11073695 + 27 NA Intergenic Intergenic -1845 FBgn0263971 FBgn0263971 FBtr0329904 CG43725 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6480 chr3R 27150317 27150374 + 27 NA intron (FBgn0085376, intron 1 of 7) protein_coding-intron (FBgn0085376, intron 1 of 16) 13449 FBgn0085376 FBgn0085376 FBtr0301051 CG34347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4695 chr3R 2067480 2067534 + 27 NA Intergenic Intergenic 7076 FBgn0027527 FBgn0027527 FBtr0078596 Osi6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_921 chr2L 14292838 14292927 + 27 NA TTS (FBgn0263649) ncRNA-TTS (FBgn0263649) 1681 FBgn0263648 FBgn0263648 FBtr0310012 CR43639 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2445 chr2R 9205829 9205933 + 27 NA Intergenic Intergenic 11065 FBgn0262391 FBgn0262391 FBtr0304273 mir-184 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2527 chr2R 10552305 10552359 + 27 NA TTS (FBgn0033954) protein_coding-TTS (FBgn0033954) 524 FBgn0033953 FBgn0033953 FBtr0087481 CG12861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5163 chr3R 9066369 9066483 + 27 NA intron (FBgn0000024, intron 6 of 10) protein_coding-intron (FBgn0000024, intron 5 of 9) 18814 FBgn0000024 FBgn0000024 FBtr0082780 Ace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2196 chr2R 5359371 5359425 + 27 NA exon (FBgn0259234, exon 10 of 19) protein_coding-exon (FBgn0259234, exon 10 of 19) -16945 FBgn0053757 FBgn0053757 FBtr0091758 CG33757 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1735 chr2L 22058170 22058224 + 27 NA Intergenic Intergenic -3952 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2065 chr2R 3308775 3308829 + 27 NA intron (FBgn0003460, intron 1 of 6) protein_coding-intron (FBgn0003460, intron 1 of 6) 2265 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7207 chrX 15680071 15680125 + 27 NA promoter-TSS (FBgn0030692) protein_coding-promoter-TSS (FBgn0030692) 12 FBgn0030692 FBgn0030692 FBtr0074094 mRpS30 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6116 chr3R 23558820 23558896 + 27 NA Intergenic Intergenic -3404 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4841 chr3R 4000348 4000443 + 27 NA intron (FBgn0001138, intron 2 of 8) protein_coding-intron (FBgn0001138, intron 2 of 8) 6769 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1754 chr2L 22100568 22100630 + 27 NA Intergenic Intergenic 3802 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_910 chr2L 14136577 14136697 + 27 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 2146 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6223 chr3R 24418413 24418510 + 27 NA promoter-TSS (FBgn0263388) protein_coding-promoter-TSS (FBgn0263388) -749 FBgn0263388 FBgn0263388 FBtr0309076 CG43440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1286 chr2L 17577374 17577428 + 27 NA Intergenic Intergenic 2727 FBgn0262400 FBgn0262400 FBtr0304303 mir-287 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6323 chr3R 25406736 25406790 + 27 NA Intergenic Intergenic 7059 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2719 chr2R 13809423 13809526 + 27 NA exon (FBgn0011589, exon 16 of 17) protein_coding-exon (FBgn0011589, exon 16 of 17) 26891 FBgn0034284 FBgn0034284 FBtr0086803 CG14491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6575 chr3RHet 1694218 1694276 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3424 chr3L 620128 620193 + 27 NA TTS (FBgn0263042) protein_coding-TTS (FBgn0263042) 2156 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4879 chr3R 4466060 4466114 + 27 NA Intergenic Intergenic 2060 FBgn0012028 FBgn0012028 FBtr0081895 tRNA:Y1:85Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_2955 chr2R 17867203 17867262 + 27 NA promoter-TSS (FBgn0041239) protein_coding-promoter-TSS (FBgn0041239) -42 FBgn0041238 FBgn0041238 FBtr0071732 Gr58b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5602 chr3R 15030723 15030822 + 27 NA Intergenic Intergenic -7143 FBgn0025680 FBgn0025680 FBtr0083736 cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6163 chr3R 23953257 23953311 + 27 NA Intergenic Intergenic -19318 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5555 chr3R 14352713 14352780 + 27 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 18562 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3480 chr3L 1578841 1578918 + 27 NA intron (FBgn0035237, intron 1 of 4) protein_coding-intron (FBgn0035237, intron 1 of 4) 2180 FBgn0035237 FBgn0035237 FBtr0303993 CG13917 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1984 chr2R 1435320 1435374 + 27 NA exon (FBgn0050438, exon 4 of 6) protein_coding-exon (FBgn0050438, exon 4 of 6) 22945 FBgn0050438 FBgn0050438 FBtr0086070 CG30438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_270 chr2L 4161034 4161089 + 27 NA Intergenic Intergenic 5073 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2243 chr2R 6107788 6107842 + 27 NA intron (FBgn0000448, intron 1 of 8) protein_coding-intron (FBgn0000448, intron 1 of 8) 7643 FBgn0000448 FBgn0000448 FBtr0306346 Hr46 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_600 chr2L 8874709 8874798 + 27 NA Intergenic Intergenic 7986 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6438 chr3R 26773449 26773538 + 27 NA Intergenic Intergenic -10669 FBgn0039811 FBgn0039811 FBtr0085751 CG15550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6276 chr3R 25000949 25001003 + 27 NA exon (FBgn0039647, exon 7 of 8) protein_coding-exon (FBgn0039647, exon 7 of 8) 9461 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_322 chr2L 4683914 4683973 + 27 NA exon (FBgn0000227, exon 2 of 2) protein_coding-exon (FBgn0000227, exon 2 of 2) 516 FBgn0000227 FBgn0000227 FBtr0077423 Bsg25A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2696 chr2R 13380176 13380230 + 27 NA exon (FBgn0050104, exon 7 of 7) protein_coding-exon (FBgn0050104, exon 7 of 7) -1064 FBgn0050103 FBgn0050103 FBtr0086929 CG30103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_714 chr2L 11165857 11165964 + 27 NA exon (FBgn0259822, exon 4 of 10) protein_coding-exon (FBgn0259822, exon 4 of 10) 1986 FBgn0259822 FBgn0259822 FBtr0300537 Ca-beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1211 chr2L 16920320 16920374 + 27 NA Intergenic Intergenic -10038 FBgn0026150 FBgn0026150 FBtr0304931 ApepP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6205 chr3R 24263778 24263832 + 27 NA intron (FBgn0039584, intron 1 of 6) protein_coding-intron (FBgn0039584, intron 1 of 6) 19875 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4037 chr3L 13454429 13454520 + 27 NA intron (FBgn0036368, intron 4 of 14) protein_coding-intron (FBgn0036368, intron 4 of 14) -4136 FBgn0036367 FBgn0036367 FBtr0075824 CG10116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4395 chr3L 19651741 19651795 + 27 NA intron (FBgn0036899, intron 1 of 8) protein_coding-intron (FBgn0036899, intron 1 of 8) 5436 FBgn0036899 FBgn0036899 FBtr0331860 tey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_663 chr2L 10024109 10024163 + 27 NA Intergenic Intergenic -2604 FBgn0032176 FBgn0032176 FBtr0079933 CG13127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3105 chr2R 20523713 20523822 + 27 NA intron (FBgn0035041, intron 2 of 7) protein_coding-intron (FBgn0035041, intron 2 of 7) 2343 FBgn0035041 FBgn0035041 FBtr0072336 CG13594 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2363 chr2R 7823503 7823559 + 27 NA Intergenic Intergenic -3458 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3042 chr2R 19516935 19516990 + 27 NA Intergenic Intergenic -3173 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5166 chr3R 9126770 9126844 + 27 NA exon (FBgn0038136, exon 6 of 7) protein_coding-exon (FBgn0038136, exon 6 of 7) 2104 FBgn0038136 FBgn0038136 FBtr0082741 CG8774 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1656 chr2L 21767408 21767462 + 27 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 9425 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6103 chr3R 23365120 23365212 + 27 NA Intergenic Intergenic -3053 FBgn0046887 FBgn0046887 FBtr0085186 Gr98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3964 chr3L 12313981 12314040 + 27 NA Intergenic Intergenic -8322 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4971 chr3R 6271167 6271244 + 27 NA Intergenic Intergenic 10694 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3668 chr3L 6475710 6475781 + 27 NA intron (FBgn0261801, intron 5 of 6) protein_coding-intron (FBgn0261801, intron 5 of 6) 5779 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4833 chr3R 3901780 3901870 + 27 NA TTS (FBgn0086052) snoRNA-TTS (FBgn0086052) 472 FBgn0086052 FBgn0086052 FBtr0114328 snoRNA:Me18S-G423 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1050 chr2L 15171082 15171136 + 27 NA intron (FBgn0028888, intron 3 of 5) protein_coding-intron (FBgn0028888, intron 3 of 5) 29300 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4622 chr3R 796504 796560 + 27 NA Intergenic Intergenic 5365 FBgn0037290 FBgn0037290 FBtr0078841 CG1124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5345 chr3R 11965404 11965459 + 27 NA intron (FBgn0003319, intron 2 of 10) protein_coding-intron (FBgn0003319, intron 2 of 10) 7146 FBgn0038400 FBgn0038400 FBtr0083281 CG5903 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7213 chrX 16046652 16046706 + 27 NA Intergenic Intergenic -28314 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_592 chr2L 8856800 8856866 + 27 NA Intergenic Intergenic -5943 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6431 chr3R 26743953 26744007 + 27 NA intron (FBgn0020912, intron 2 of 4) protein_coding-intron (FBgn0020912, intron 2 of 4) 5370 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5689 chr3R 15979463 15979533 + 27 NA Intergenic Intergenic -13855 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1047 chr2L 15103099 15103153 + 27 NA Intergenic Intergenic -6279 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6466 chr3R 26981729 26981819 + 27 NA intron (FBgn0013973, intron 15 of 16) protein_coding-intron (FBgn0013973, intron 15 of 16) 13051 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_131 chr2L 1575472 1575536 + 27 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 11651 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_975 chr2L 14586443 14586497 + 27 NA Intergenic Intergenic 1764 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6551 chr3RHet 630509 630563 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6161 chr3R 23931963 23932017 + 27 NA Intergenic Intergenic -40612 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1016 chr2L 14800973 14801048 + 27 NA Intergenic Intergenic -1324 FBgn0250834 FBgn0250834 FBtr0080673 CG33308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_448 chr2L 6854067 6854121 + 27 NA promoter-TSS (FBgn0086451) protein_coding-promoter-TSS (FBgn0086451) -76 FBgn0086451 FBgn0086451 FBtr0079343 l(2)k09022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6561 chr3RHet 819510 819577 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2369 chr2R 7941748 7941826 + 27 NA promoter-TSS (FBgn0028407) protein_coding-promoter-TSS (FBgn0028407) -806 FBgn0028407 FBgn0028407 FBtr0087980 Drep-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3501 chr3L 2002462 2002599 + 27 NA TTS (FBgn0262030) protein_coding-TTS (FBgn0262030) 3121 FBgn0262030 FBgn0262030 FBtr0303925 CG42841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3497 chr3L 1916713 1916767 + 27 NA Intergenic Intergenic -4567 FBgn0261723 FBgn0261723 FBtr0290136 Dbx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2522 chr2R 10480792 10480846 + 27 NA exon (FBgn0033943, exon 4 of 4) protein_coding-exon (FBgn0033943, exon 4 of 4) 2111 FBgn0033943 FBgn0033943 FBtr0087496 CG12869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1669 chr2L 21818715 21818796 + 27 NA Intergenic Intergenic -9838 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6167 chr3R 23973772 23973826 + 27 NA exon (FBgn0085383, exon 2 of 9) protein_coding-exon (FBgn0085383, exon 2 of 9) 1197 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3326 chr2RHet 2072932 2072986 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3029 chr2R 19203339 19203416 + 27 NA Intergenic Intergenic -2000 FBgn0263084 FBgn0263084 FBtr0307100 CG43352 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2594 chr2R 11559204 11559262 + 27 NA intron (FBgn0023441, intron 2 of 12) protein_coding-intron (FBgn0023441, intron 2 of 9) -6634 FBgn0023441 FBgn0023441 FBtr0087347 fus protein_coding Nup98-S2-pascual-garcia2017_R1_peak_622 chr2L 9061254 9061308 + 27 NA intron (FBgn0051708, intron 3 of 9) protein_coding-intron (FBgn0051708, intron 3 of 9) 9881 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4693 chr3R 2047601 2047658 + 27 NA promoter-TSS (FBgn0037412) protein_coding-promoter-TSS (FBgn0037412) -126 FBgn0037412 FBgn0037412 FBtr0078615 Osi4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6662 chr4 1036114 1036187 + 27 NA exon (FBgn0025741, exon 5 of 10) protein_coding-exon (FBgn0025741, exon 5 of 10) 11570 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5863 chr3R 19100882 19100936 + 27 NA intron (FBgn0004882, intron 2 of 9) protein_coding-intron (FBgn0004882, intron 2 of 9) -4877 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3173 chr2RHet 464157 464217 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6718 chrU 213041 213118 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2801 chr2R 15205099 15205154 + 27 NA exon (FBgn0034434, exon 5 of 10) protein_coding-exon (FBgn0034434, exon 5 of 10) -6929 FBgn0034433 FBgn0034433 FBtr0113098 endoB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1090 chr2L 15509567 15509621 + 27 NA Intergenic Intergenic 10484 FBgn0002524 FBgn0002524 FBtr0080738 lace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3031 chr2R 19231465 19231550 + 27 NA exon (FBgn0046253, exon 5 of 6) protein_coding-exon (FBgn0046253, exon 5 of 6) -2651 FBgn0034846 FBgn0034846 FBtr0290285 CG9863 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2044 chr2R 2961761 2961815 + 27 NA promoter-TSS (FBgn0033141) protein_coding-promoter-TSS (FBgn0033141) -167 FBgn0033141 FBgn0033141 FBtr0300063 CG12831 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_625 chr2L 9260835 9260904 + 27 NA intron (FBgn0028433, intron 2 of 3) protein_coding-intron (FBgn0028433, intron 2 of 3) 4306 FBgn0263984 FBgn0263984 FBtr0330020 CG43733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6306 chr3R 25301247 25301301 + 27 NA intron (FBgn0004369, intron 11 of 18) protein_coding-intron (FBgn0004369, intron 5 of 12) -4146 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2046 chr2R 3092812 3092866 + 27 NA intron (FBgn0003090, intron 2 of 6) protein_coding-intron (FBgn0003090, intron 1 of 5) 18072 FBgn0003090 FBgn0003090 FBtr0089044 pk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1497 chr2L 20036203 20036275 + 27 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 8324 FBgn0032840 FBgn0032840 FBtr0081327 sNPF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3212 chr2RHet 919704 919758 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6808 chrU 2433648 2433703 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1806 chr2L 22485107 22485194 + 27 NA Intergenic Intergenic 12668 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2938 chr2R 17459917 17459971 + 27 NA promoter-TSS (FBgn0034636) protein_coding-promoter-TSS (FBgn0034636) 3596 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7216 chrX 16111382 16111482 + 27 NA promoter-TSS (FBgn0000459) protein_coding-promoter-TSS (FBgn0000459) -653 FBgn0000459 FBgn0000459 FBtr0100384 disco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1714 chr2L 21991493 21991551 + 27 NA exon (FBgn0032969, exon 1 of 2) protein_coding-exon (FBgn0032969, exon 1 of 2) 1411 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7005 chrX 1715892 1715946 + 27 NA exon (FBgn0029590, exon 2 of 2) protein_coding-exon (FBgn0029590, exon 2 of 2) 495 FBgn0029590 FBgn0029590 FBtr0309970 CG14811 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1579 chr2L 20771800 20771887 + 27 NA exon (FBgn0000251, exon 1 of 2) protein_coding-exon (FBgn0000251, exon 1 of 2) 949 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2230 chr2R 5830442 5830557 + 27 NA exon (FBgn0011656, exon 1 of 11) protein_coding-exon (FBgn0011656, exon 1 of 11) 15851 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1819 chr2L 22555325 22555379 + 27 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 82870 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5423 chr3R 12757240 12757294 + 27 NA promoter-TSS (FBgn0000015) protein_coding-promoter-TSS (FBgn0000015) 68 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4484 chr3L 23584163 23584237 + 27 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 35175 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1455 chr2L 19631547 19631662 + 27 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 44981 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6810 chrU 2435413 2435527 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2897 chr2R 16811340 16811394 + 27 NA exon (FBgn0020617, exon 4 of 6) protein_coding-exon (FBgn0020617, exon 4 of 6) 7082 FBgn0020617 FBgn0020617 FBtr0071518 Rx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2996 chr2R 18663656 18663710 + 27 NA intron (FBgn0259145, intron 2 of 11) protein_coding-intron (FBgn0259145, intron 2 of 11) -8126 FBgn0061435 FBgn0061435 FBtr0300125 CG30270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2556 chr2R 10970954 10971008 + 27 NA Intergenic Intergenic -27235 FBgn0053467 FBgn0053467 FBtr0089861 CG33467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4507 chr3L 23813575 23813671 + 27 NA Intergenic Intergenic 36292 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2279 chr2R 6603965 6604020 + 27 NA exon (FBgn0024836, exon 3 of 4) protein_coding-exon (FBgn0024836, exon 3 of 4) -8783 FBgn0033542 FBgn0033542 FBtr0088215 CG12309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5498 chr3R 13730864 13730949 + 27 NA exon (FBgn0053547, exon 7 of 27) protein_coding-exon (FBgn0053547, exon 7 of 27) -1280 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7036 chrX 3705762 3705816 + 27 NA exon (FBgn0000542, exon 1 of 6) protein_coding-exon (FBgn0000542, exon 1 of 6) 7571 FBgn0061173 FBgn0061173 FBtr0070602 fd3F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1964 chr2R 852920 853027 + 27 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 15801 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2984 chr2R 18355248 18355379 + 27 NA intron (FBgn0034731, intron 2 of 5) protein_coding-intron (FBgn0034731, intron 2 of 5) 1319 FBgn0034731 FBgn0034731 FBtr0300683 CG10384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5871 chr3R 19521720 19521798 + 26 NA TTS (FBgn0043005) protein_coding-TTS (FBgn0043005) 241 FBgn0039104 FBgn0039104 FBtr0084475 CG10252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3307 chr2RHet 1946801 1946884 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4593 chr3R 106886 106943 + 26 NA promoter-TSS (FBgn0041605) protein_coding-promoter-TSS (FBgn0041605) -3399 FBgn0037229 FBgn0037229 FBtr0078980 CG9766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2328 chr2R 7465314 7465456 + 26 NA TTS (FBgn0033636) protein_coding-TTS (FBgn0033636) 10451 FBgn0082993 FBgn0082993 FBtr0113499 snoRNA:Psi28S-1936 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_310 chr2L 4498047 4498101 + 26 NA exon (FBgn0053196, exon 67 of 82) protein_coding-exon (FBgn0053196, exon 67 of 82) -21050 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_422 chr2L 6353701 6353762 + 26 NA exon (FBgn0031802, exon 1 of 5) protein_coding-exon (FBgn0031802, exon 1 of 5) 600 FBgn0031802 FBgn0031802 FBtr0079281 ppk7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7116 chrX 8800982 8801077 + 26 NA promoter-TSS (FBgn0011586) protein_coding-promoter-TSS (FBgn0011586) -1006 FBgn0011586 FBgn0011586 FBtr0071266 e(r) protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5082 chr3R 7933549 7933624 + 26 NA exon (FBgn0051361, exon 3 of 7) protein_coding-exon (FBgn0051361, exon 3 of 7) 9778 FBgn0051361 FBgn0051361 FBtr0082543 dpr17 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4920 chr3R 5144045 5144144 + 26 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -3398 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_852 chr2L 13097133 13097187 + 26 NA Intergenic Intergenic -9711 FBgn0032470 FBgn0032470 FBtr0301366 CG5142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2935 chr2R 17454064 17454178 + 26 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 9419 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4230 chr3L 16730730 16730816 + 26 NA exon (FBgn0036659, exon 3 of 4) protein_coding-exon (FBgn0036659, exon 3 of 4) 4127 FBgn0036659 FBgn0036659 FBtr0075321 CG9701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1080 chr2L 15428005 15428089 + 26 NA Intergenic Intergenic -2462 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_817 chr2L 12685583 12685672 + 26 NA exon (FBgn0004394, exon 5 of 5) protein_coding-exon (FBgn0004394, exon 5 of 5) 7021 FBgn0004394 FBgn0004394 FBtr0080393 pdm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_559 chr2L 8747916 8747970 + 26 NA Intergenic Intergenic -4362 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5640 chr3R 15498032 15498086 + 26 NA promoter-TSS (FBgn0012003) tRNA-promoter-TSS (FBgn0012003) 12 FBgn0012003 FBgn0012003 FBtr0083799 tRNA:V3b:92Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_1733 chr2L 22055740 22055833 + 26 NA Intergenic Intergenic -1541 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_51 chr2L 931298 931352 + 26 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 8532 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1465 chr2L 19700033 19700087 + 26 NA exon (FBgn0005590, exon 1 of 1) protein_coding-exon (FBgn0005590, exon 1 of 1) 908 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3465 chr3L 1204233 1204287 + 26 NA exon (FBgn0035189, exon 2 of 2) protein_coding-exon (FBgn0035189, exon 2 of 2) 532 FBgn0035189 FBgn0035189 FBtr0072635 CG9119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_454 chr2L 7042248 7042321 + 26 NA promoter-TSS (FBgn0262872) protein_coding-promoter-TSS (FBgn0262872) -75 FBgn0262872 FBgn0262872 FBtr0306230 milt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6510 chr3R 27506979 27507033 + 26 NA Intergenic Intergenic -1404 FBgn0039864 FBgn0039864 FBtr0085867 CG11550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_854 chr2L 13165497 13165561 + 26 NA promoter-TSS (FBgn0024291) protein_coding-promoter-TSS (FBgn0024291) -22 FBgn0024291 FBgn0024291 FBtr0080434 Sir2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3422 chr3L 618772 618854 + 26 NA Intergenic Intergenic -2167 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7267 chrX 20905864 20905918 + 26 NA promoter-TSS (FBgn0031145) protein_coding-promoter-TSS (FBgn0031145) -605 FBgn0031145 FBgn0031145 FBtr0333761 Ntf-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_483 chr2L 7782189 7782271 + 26 NA promoter-TSS (FBgn0031947) protein_coding-promoter-TSS (FBgn0031947) -627 FBgn0031947 FBgn0031947 FBtr0079488 CG7154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6362 chr3R 25581326 25581389 + 25 NA Intergenic Intergenic 6416 FBgn0260990 FBgn0260990 FBtr0085477 yata protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4137 chr3L 15161226 15161281 + 25 NA Intergenic Intergenic -4525 FBgn0036489 FBgn0036489 FBtr0075645 CG7011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_918 chr2L 14279494 14279607 + 25 NA intron (FBgn0261563, intron 2 of 12) protein_coding-intron (FBgn0261563, intron 2 of 15) 4755 FBgn0052971 FBgn0052971 FBtr0080621 CG32971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6337 chr3R 25515997 25516127 + 25 NA Intergenic Intergenic -1029 FBgn0039682 FBgn0039682 FBtr0085463 Obp99c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_283 chr2L 4308269 4308323 + 25 NA exon (FBgn0010473, exon 8 of 10) protein_coding-exon (FBgn0010473, exon 8 of 10) -16277 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4192 chr3L 16053921 16053975 + 25 NA intron (FBgn0005536, intron 2 of 17) protein_coding-intron (FBgn0005536, intron 2 of 15) 8889 FBgn0005536 FBgn0005536 FBtr0075441 Mbs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2905 chr2R 16908516 16908570 + 25 NA exon (FBgn0050296, exon 4 of 10) protein_coding-exon (FBgn0050296, exon 4 of 10) 3253 FBgn0050296 FBgn0050296 FBtr0310056 RIC-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1384 chr2L 18671493 18671576 + 25 NA promoter-TSS (FBgn0263079) protein_coding-promoter-TSS (FBgn0263079) -347 FBgn0263079 FBgn0263079 FBtr0306921 CG43338 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4720 chr3R 2483122 2483197 + 25 NA promoter-TSS (FBgn0262801) protein_coding-promoter-TSS (FBgn0262801) 49 FBgn0026566 FBgn0026566 FBtr0301623 CG1307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4038 chr3L 13511250 13511304 + 25 NA exon (FBgn0036377, exon 2 of 2) protein_coding-exon (FBgn0036377, exon 2 of 2) 1428 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4956 chr3R 5913129 5913204 + 25 NA Intergenic Intergenic -3737 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7066 chrX 5793690 5793802 + 25 NA Intergenic Intergenic -1148 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_106 chr2L 1387701 1387755 + 25 NA intron (FBgn0002543, intron 9 of 13) protein_coding-intron (FBgn0002543, intron 9 of 13) 19639 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_609 chr2L 8921408 8921462 + 25 NA intron (FBgn0085427, intron 2 of 10) protein_coding-intron (FBgn0085427, intron 2 of 10) -12628 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_489 chr2L 7919105 7919171 + 25 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -28544 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2157 chr2R 4739852 4739924 + 25 NA exon (FBgn0024189, exon 21 of 21) protein_coding-exon (FBgn0024189, exon 21 of 21) -7981 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3384 chr2RHet 2589059 2589117 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2066 chr2R 3321946 3322033 + 25 NA exon (FBgn0003460, exon 7 of 7) protein_coding-exon (FBgn0003460, exon 7 of 7) -5891 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_857 chr2L 13277509 13277563 + 25 NA exon (FBgn0032498, exon 1 of 1) protein_coding-exon (FBgn0032498, exon 1 of 1) 160 FBgn0032498 FBgn0032498 FBtr0080459 CG6108 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_111 chr2L 1413852 1413906 + 25 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 6570 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2936 chr2R 17456730 17456784 + 25 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 6783 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3817 chr3L 9065786 9065840 + 25 NA promoter-TSS (FBgn0035960) protein_coding-promoter-TSS (FBgn0035960) 18 FBgn0035959 FBgn0035959 FBtr0331549 CG4911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1603 chr2L 21188988 21189042 + 25 NA intron (FBgn0011829, intron 1 of 5) protein_coding-intron (FBgn0011829, intron 3 of 7) 6487 FBgn0011829 FBgn0011829 FBtr0081496 Ret protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2927 chr2R 17414071 17414125 + 25 NA intron (FBgn0003731, intron 1 of 4) protein_coding-intron (FBgn0003731, intron 1 of 4) -4745 FBgn0050289 FBgn0050289 FBtr0071697 CG30289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7040 chrX 4021790 4021852 + 25 NA exon (FBgn0026083, exon 6 of 6) protein_coding-exon (FBgn0026083, exon 6 of 6) -3429 FBgn0066114 FBgn0066114 FBtr0070644 GlcAT-I protein_coding Nup98-S2-pascual-garcia2017_R1_peak_847 chr2L 13010327 13010414 + 25 NA exon (FBgn0021796, exon 6 of 7) protein_coding-exon (FBgn0021796, exon 6 of 7) 5584 FBgn0021796 FBgn0021796 FBtr0080422 Tor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6357 chr3R 25539578 25539632 + 25 NA promoter-TSS (FBgn0039684) protein_coding-promoter-TSS (FBgn0039684) -656 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1657 chr2L 21768213 21768357 + 24 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 10275 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1569 chr2L 20687402 20687491 + 24 NA exon (FBgn0014859, exon 4 of 5) protein_coding-exon (FBgn0014859, exon 4 of 5) 5076 FBgn0032877 FBgn0032877 FBtr0081391 CG2617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3427 chr3L 622050 622106 + 24 NA exon (FBgn0263042, exon 1 of 2) protein_coding-exon (FBgn0263042, exon 1 of 2) 238 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_16 chr2L 399903 399972 + 24 NA exon (FBgn0031251, exon 4 of 5) protein_coding-exon (FBgn0031251, exon 4 of 5) 2117 FBgn0031251 FBgn0031251 FBtr0331204 CG4213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4904 chr3R 4845715 4845821 + 24 NA promoter-TSS (FBgn0264075) protein_coding-promoter-TSS (FBgn0264075) -29 FBgn0264075 FBgn0264075 FBtr0082005 tgo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1449 chr2L 19510620 19510720 + 24 NA exon (FBgn0032797, exon 16 of 17) protein_coding-exon (FBgn0032797, exon 16 of 17) -1910 FBgn0032796 FBgn0032796 FBtr0329963 CG10188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_566 chr2L 8770571 8770628 + 24 NA exon (FBgn0032067, exon 4 of 5) protein_coding-exon (FBgn0032067, exon 4 of 5) 1745 FBgn0032067 FBgn0032067 FBtr0302992 CG9465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2282 chr2R 6671997 6672059 + 24 NA intron (FBgn0053144, intron 1 of 7) protein_coding-intron (FBgn0053144, intron 1 of 7) -6936 FBgn0050018 FBgn0050018 FBtr0304706 mthl13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6219 chr3R 24408042 24408122 + 24 NA exon (FBgn0000659, exon 1 of 1) protein_coding-exon (FBgn0000659, exon 1 of 1) 2752 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5900 chr3R 20370185 20370256 + 24 NA promoter-TSS (FBgn0039208) protein_coding-promoter-TSS (FBgn0039208) -1073 FBgn0039207 FBgn0039207 FBtr0306025 CG5789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6689 chrU 79216 79341 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4350 chr3L 18181744 18181811 + 24 NA Intergenic Intergenic -3036 FBgn0003997 FBgn0003997 FBtr0332862 W protein_coding Nup98-S2-pascual-garcia2017_R1_peak_211 chr2L 3140719 3140773 + 24 NA intron (FBgn0015600, intron 1 of 10) protein_coding-intron (FBgn0015600, intron 1 of 10) 5102 FBgn0031505 FBgn0031505 FBtr0077617 CG12400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4184 chr3L 16014127 16014181 + 24 NA exon (FBgn0264600, exon 1 of 1) protein_coding-exon (FBgn0264600, exon 1 of 1) 452 FBgn0264600 FBgn0264600 FBtr0333620 CG43949 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_794 chr2L 12520497 12520598 + 24 NA intron (FBgn0259176, intron 5 of 7) protein_coding-intron (FBgn0259176, intron 5 of 7) 12439 FBgn0263458 FBgn0263458 FBtr0309757 snoRNA:CG43051-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3583 chr3L 4404894 4404948 + 24 NA TTS (FBgn0035541) protein_coding-TTS (FBgn0035541) 1138 FBgn0035541 FBgn0035541 FBtr0073335 CG15019 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2853 chr2R 16027138 16027379 + 24 NA Intergenic Intergenic -6380 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2119 chr2R 4232743 4232797 + 24 NA intron (FBgn0261588, intron 1 of 10) protein_coding-intron (FBgn0261588, intron 1 of 10) -13273 FBgn0033283 FBgn0033283 FBtr0088739 CG11635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6999 chrX 1553254 1553315 + 24 NA exon (FBgn0000210, exon 8 of 8) protein_coding-exon (FBgn0000210, exon 8 of 8) -5804 FBgn0000482 FBgn0000482 FBtr0070269 dor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6354 chr3R 25536767 25536886 + 24 NA Intergenic Intergenic -3435 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6986 chrX 1395675 1395729 + 24 NA promoter-TSS (FBgn0053513) protein_coding-promoter-TSS (FBgn0053513) 6140 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_114 chr2L 1445720 1445822 + 24 NA Intergenic Intergenic 3045 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3295 chr2RHet 1928097 1928163 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5763 chr3R 16873659 16873713 + 24 NA promoter-TSS (FBgn0051207) protein_coding-promoter-TSS (FBgn0051207) 857 FBgn0038849 FBgn0038849 FBtr0084043 CG7079 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2039 chr2R 2824095 2824149 + 24 NA intron (FBgn0053558, intron 4 of 12) protein_coding-intron (FBgn0053558, intron 4 of 15) 7378 FBgn0066293 FBgn0066293 FBtr0086192 CheB42b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_803 chr2L 12626080 12626147 + 24 NA exon (FBgn0085424, exon 5 of 6) protein_coding-exon (FBgn0085424, exon 5 of 6) 7765 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4637 chr3R 1140969 1141043 + 24 NA intron (FBgn0013576, intron 2 of 16) protein_coding-intron (FBgn0013576, intron 2 of 18) 15139 FBgn0037310 FBgn0037310 FBtr0078784 Tim17b1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1995 chr2R 1765106 1765166 + 24 NA Intergenic Intergenic -16293 FBgn0263109 FBgn0263109 FBtr0307307 CG43366 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_739 chr2L 11517257 11517312 + 23 NA promoter-TSS (FBgn0032364) protein_coding-promoter-TSS (FBgn0032364) -120 FBgn0032364 FBgn0032364 FBtr0080239 CG4970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3437 chr3L 685239 685299 + 23 NA TTS (FBgn0035154) protein_coding-TTS (FBgn0035154) 280 FBgn0035153 FBgn0035153 FBtr0072610 ebd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_512 chr2L 8485312 8485366 + 23 NA promoter-TSS (FBgn0263489) ncRNA-promoter-TSS (FBgn0263489) -386 FBgn0263489 FBgn0263489 FBtr0309788 unsRNA:d-a ncRNA Nup98-S2-pascual-garcia2017_R1_peak_493 chr2L 7976798 7976895 + 23 NA exon (FBgn0085450, exon 1 of 2) protein_coding-exon (FBgn0085450, exon 1 of 2) 219 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3607 chr3L 5349427 5349518 + 23 NA promoter-TSS (FBgn0052420) tRNA-promoter-TSS (FBgn0052420) 29 FBgn0052420 FBgn0052420 FBtr0077143 tRNA:CR32420 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5949 chr3R 21781841 21781895 + 23 NA exon (FBgn0039396, exon 1 of 7) protein_coding-exon (FBgn0039396, exon 1 of 7) 124 FBgn0039396 FBgn0039396 FBtr0304043 CcapR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6518 chr3R 27641566 27641643 + 23 NA intron (FBgn0039883, intron 1 of 10) protein_coding-intron (FBgn0039883, intron 1 of 7) -3764 FBgn0024891 FBgn0024891 FBtr0085851 ferrochelatase protein_coding Nup98-S2-pascual-garcia2017_R1_peak_644 chr2L 9699308 9699385 + 23 NA promoter-TSS (FBgn0015393) protein_coding-promoter-TSS (FBgn0015393) -53 FBgn0000273 FBgn0000273 FBtr0079852 Pka-C1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_183 chr2L 2589702 2589798 + 23 NA intron (FBgn0250835, intron 1 of 2) protein_coding-intron (FBgn0250835, intron 1 of 2) 896 FBgn0250835 FBgn0250835 FBtr0113016 CG15394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1757 chr2L 22161901 22162000 + 23 NA TTS (FBgn0261802) protein_coding-TTS (FBgn0261802) 7193 FBgn0032979 FBgn0032979 FBtr0085964 CG1832 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1683 chr2L 21861752 21861806 + 23 NA Intergenic Intergenic -32448 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2088 chr2R 3886176 3886260 + 23 NA promoter-TSS (FBgn0027788) protein_coding-promoter-TSS (FBgn0027788) -140 FBgn0027788 FBgn0027788 FBtr0088869 Hey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7026 chrX 3150082 3150145 + 23 NA promoter-TSS (FBgn0000479) protein_coding-promoter-TSS (FBgn0000479) 6579 FBgn0003374 FBgn0003374 FBtr0070524 Sgs4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4950 chr3R 5879709 5879763 + 23 NA exon (FBgn0051410, exon 3 of 3) protein_coding-exon (FBgn0051410, exon 3 of 3) 616 FBgn0051410 FBgn0051410 FBtr0273369 Npc2e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4367 chr3L 18660404 18660461 + 23 NA promoter-TSS (FBgn0260027) protein_coding-promoter-TSS (FBgn0260027) -29 FBgn0260027 FBgn0260027 FBtr0300582 CG42495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6365 chr3R 25598494 25598559 + 23 NA promoter-TSS (FBgn0001297) protein_coding-promoter-TSS (FBgn0001297) 7927 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4190 chr3L 16029092 16029146 + 22 NA exon (FBgn0036560, exon 2 of 4) protein_coding-exon (FBgn0036560, exon 2 of 4) 341 FBgn0036560 FBgn0036560 FBtr0333614 CG5895 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4448 chr3L 21834443 21834497 + 22 NA promoter-TSS (FBgn0037138) protein_coding-promoter-TSS (FBgn0037138) -172 FBgn0037138 FBgn0037138 FBtr0303031 P5CDh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_207 chr2L 3088678 3088738 + 22 NA intron (FBgn0015600, intron 4 of 8) protein_coding-intron (FBgn0015600, intron 6 of 10) 19434 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2718 chr2R 13756889 13756951 + 22 NA intron (FBgn0034282, intron 2 of 6) protein_coding-intron (FBgn0034282, intron 3 of 6) 2595 FBgn0034282 FBgn0034282 FBtr0113091 Mapmodulin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2002 chr2R 2038917 2038982 + 22 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) 1232 FBgn0011938 FBgn0011938 FBtr0086016 tRNA:N5:42Ah tRNA Nup98-S2-pascual-garcia2017_R1_peak_1859 chr2L 22707698 22707752 + 22 NA Intergenic Intergenic -16717 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6372 chr3R 25648054 25648145 + 22 NA exon (FBgn0039704, exon 2 of 8) protein_coding-exon (FBgn0039704, exon 2 of 8) 3265 FBgn0039704 FBgn0039704 FBtr0085486 neo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1077 chr2L 15424125 15424191 + 22 NA exon (FBgn0001983, exon 2 of 2) protein_coding-exon (FBgn0001983, exon 2 of 2) 1427 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6353 chr3R 25534542 25534637 + 22 NA Intergenic Intergenic -5672 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6307 chr3R 25327030 25327107 + 22 NA exon (FBgn0039668, exon 3 of 8) protein_coding-exon (FBgn0039668, exon 3 of 8) 2451 FBgn0039668 FBgn0039668 FBtr0085431 Trc8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3219 chr2RHet 1266463 1266522 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3430 chr3L 624303 624377 + 22 NA Intergenic Intergenic -2024 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3429 chr3L 623155 623250 + 22 NA promoter-TSS (FBgn0263042) protein_coding-promoter-TSS (FBgn0263042) -886 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_524 chr2L 8560412 8560488 + 22 NA intron (FBgn0011259, intron 2 of 20) protein_coding-intron (FBgn0011259, intron 2 of 21) -10438 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3827 chr3L 9502693 9502747 + 22 NA promoter-TSS (FBgn0036008) protein_coding-promoter-TSS (FBgn0036008) -37 FBgn0036008 FBgn0036008 FBtr0333863 CG3408 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1385 chr2L 18672952 18673014 + 22 NA TTS (FBgn0261349) protein_coding-TTS (FBgn0261349) 302 FBgn0263078 FBgn0263078 FBtr0306920 CG43339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3783 chr3L 8572741 8572836 + 21 NA intron (FBgn0262508, intron 2 of 7) protein_coding-intron (FBgn0262508, intron 2 of 7) 946 FBgn0262508 FBgn0262508 FBtr0304812 CG43078 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5769 chr3R 16964122 16964176 + 21 NA promoter-TSS (FBgn0250820) protein_coding-promoter-TSS (FBgn0250820) 157 FBgn0250820 FBgn0250820 FBtr0084017 CG5802 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5009 chr3R 6698075 6698168 + 21 NA promoter-TSS (FBgn0037849) protein_coding-promoter-TSS (FBgn0037849) -19 FBgn0011768 FBgn0011768 FBtr0082290 Fdh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5221 chr3R 9926508 9926577 + 21 NA exon (FBgn0038201, exon 3 of 4) protein_coding-exon (FBgn0038201, exon 3 of 4) 2302 FBgn0038201 FBgn0038201 FBtr0100131 Pk1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5629 chr3R 15410804 15410858 + 21 NA intron (FBgn0260003, intron 1 of 10) protein_coding-intron (FBgn0260003, intron 26 of 34) -1087 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_427 chr2L 6480849 6480927 + 21 NA promoter-TSS (FBgn0031820) protein_coding-promoter-TSS (FBgn0031820) -68 FBgn0031820 FBgn0031820 FBtr0079260 DLP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7035 chrX 3642862 3643059 + 21 NA intron (FBgn0086899, intron 1 of 9) protein_coding-intron (FBgn0086899, intron 1 of 9) -23713 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_478 chr2L 7530939 7531004 + 21 NA intron (FBgn0085403, intron 2 of 4) protein_coding-intron (FBgn0085403, intron 3 of 5) -15711 FBgn0085403 FBgn0085403 FBtr0112606 Rapgap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2401 chr2R 8630646 8630721 + 21 NA intron (FBgn0261545, intron 4 of 8) protein_coding-intron (FBgn0261545, intron 3 of 7) 9758 FBgn0033773 FBgn0033773 FBtr0087865 mos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3907 chr3L 11063699 11063796 + 21 NA promoter-TSS (FBgn0263241) protein_coding-promoter-TSS (FBgn0263241) 121 FBgn0263241 FBgn0263241 FBtr0076204 Mocs1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1747 chr2L 22083271 22083360 + 21 NA Intergenic Intergenic 3643 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5331 chr3R 11900985 11901059 + 21 NA exon (FBgn0026059, exon 1 of 7) protein_coding-exon (FBgn0026059, exon 1 of 7) 864 FBgn0026059 FBgn0026059 FBtr0303845 Mhcl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5703 chr3R 16162630 16162684 + 21 NA Intergenic Intergenic -2332 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3811 chr3L 9012459 9012579 + 20 NA promoter-TSS (FBgn0035956) protein_coding-promoter-TSS (FBgn0035956) -173 FBgn0035956 FBgn0035956 FBtr0076547 Doc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1726 chr2L 22030537 22030628 + 20 NA Intergenic Intergenic -7278 FBgn0084001 FBgn0084001 FBtr0332199 CG41434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_302 chr2L 4432029 4432083 + 20 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -1852 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3466 chr3L 1217057 1217123 + 20 NA TTS (FBgn0004429) protein_coding-TTS (FBgn0004429) 1606 FBgn0004429 FBgn0004429 FBtr0072633 LysP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3050 chr2R 19566749 19566819 + 20 NA TTS (FBgn0034886) protein_coding-TTS (FBgn0034886) -2363 FBgn0034887 FBgn0034887 FBtr0114541 St1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1495 chr2L 20027295 20027376 + 20 NA promoter-TSS (FBgn0032840) protein_coding-promoter-TSS (FBgn0032840) -580 FBgn0032840 FBgn0032840 FBtr0081327 sNPF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5218 chr3R 9914223 9914316 + 20 NA promoter-TSS (FBgn0038198) protein_coding-promoter-TSS (FBgn0038198) -2227 FBgn0038198 FBgn0038198 FBtr0082889 Npc2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5641 chr3R 15519990 15520044 + 20 NA intron (FBgn0051216, intron 3 of 6) protein_coding-intron (FBgn0051216, intron 3 of 6) 21632 FBgn0085315 FBgn0085315 FBtr0112482 CG34286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6241 chr3R 24583392 24583487 + 20 NA promoter-TSS (FBgn0039597) protein_coding-promoter-TSS (FBgn0039597) 517 FBgn0039598 FBgn0039598 FBtr0085313 CG14061 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6168 chr3R 23975541 23975606 + 20 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 2971 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4791 chr3R 3138889 3138974 + 20 NA Intergenic Intergenic -3812 FBgn0259172 FBgn0259172 FBtr0299637 rn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1052 chr2L 15189605 15189702 + 20 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 10756 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1251 chr2L 17205915 17205991 + 20 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 24015 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1089 chr2L 15488795 15488883 + 20 NA Intergenic Intergenic 4071 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4220 chr3L 16511573 16511671 + 20 NA exon (FBgn0263131, exon 8 of 31) protein_coding-exon (FBgn0263131, exon 8 of 31) 20871 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4775 chr3R 2990244 2990322 + 20 NA exon (FBgn0002306, exon 2 of 10) protein_coding-exon (FBgn0002306, exon 2 of 10) 1732 FBgn0002306 FBgn0002306 FBtr0081571 sas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5990 chr3R 22176275 22176329 + 20 NA intron (FBgn0053970, intron 5 of 8) protein_coding-intron (FBgn0053970, intron 5 of 8) -4908 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2406 chr2R 8692255 8692309 + 20 NA Intergenic Intergenic -1900 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_603 chr2L 8881275 8881382 + 20 NA Intergenic Intergenic -10161 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4366 chr3L 18657489 18657543 + 20 NA exon (FBgn0036801, exon 8 of 9) protein_coding-exon (FBgn0036801, exon 8 of 9) -2945 FBgn0260027 FBgn0260027 FBtr0300582 CG42495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4193 chr3L 16069112 16069166 + 20 NA intron (FBgn0005536, intron 2 of 6) protein_coding-intron (FBgn0005536, intron 2 of 6) -6512 FBgn0053258 FBgn0053258 FBtr0301030 CG33258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1076 chr2L 15417664 15417745 + 20 NA Intergenic Intergenic 7881 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3767 chr3L 8319988 8320084 + 20 NA exon (FBgn0250833, exon 3 of 3) protein_coding-exon (FBgn0250833, exon 3 of 3) 1077 FBgn0250833 FBgn0250833 FBtr0112767 CG34461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2253 chr2R 6233466 6233547 + 20 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 6160 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_758 chr2L 11808927 11808991 + 20 NA promoter-TSS (FBgn0020309) protein_coding-promoter-TSS (FBgn0020309) 13 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1101 chr2L 15579930 15579984 + 20 NA exon (FBgn0028370, exon 3 of 4) protein_coding-exon (FBgn0028370, exon 3 of 4) 27234 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3692 chr3L 6938366 6938420 + 20 NA intron (FBgn0035719, intron 2 of 6) protein_coding-intron (FBgn0035719, intron 1 of 5) 2437 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_62 chr2L 1017499 1017575 + 20 NA exon (FBgn0031294, exon 5 of 11) protein_coding-exon (FBgn0031294, exon 5 of 11) 9353 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_764 chr2L 11864810 11864864 + 20 NA intron (FBgn0259225, intron 1 of 8) protein_coding-intron (FBgn0259225, intron 3 of 9) 11407 FBgn0261805 FBgn0261805 FBtr0303281 CG42751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6922 chrUextra 11807545 11807599 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2056 chr2R 3234002 3234056 + 20 NA exon (FBgn0033159, exon 9 of 24) protein_coding-exon (FBgn0033159, exon 9 of 24) 35116 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6601 chr4 190355 190409 + 20 NA exon (FBgn0053978, exon 4 of 4) protein_coding-exon (FBgn0053978, exon 4 of 4) 5384 FBgn0053978 FBgn0053978 FBtr0310436 CG33978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5708 chr3R 16170453 16170528 + 20 NA TTS (FBgn0038789) protein_coding-TTS (FBgn0038789) 5501 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4782 chr3R 3063115 3063184 + 20 NA exon (FBgn0037487, exon 5 of 6) protein_coding-exon (FBgn0037487, exon 5 of 6) -4333 FBgn0037488 FBgn0037488 FBtr0303218 CG14607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4628 chr3R 940151 940205 + 20 NA Intergenic Intergenic -5278 FBgn0262605 FBgn0262605 FBtr0305279 CG43131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6779 chrU 1591796 1591901 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_729 chr2L 11378087 11378164 + 20 NA Intergenic Intergenic 14173 FBgn0263764 FBgn0263764 FBtr0333747 CG43681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4620 chr3R 781738 781823 + 20 NA promoter-TSS (FBgn0037288) protein_coding-promoter-TSS (FBgn0037288) -806 FBgn0037288 FBgn0037288 FBtr0305965 CG14661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2371 chr2R 7971030 7971090 + 20 NA Intergenic Intergenic 2279 FBgn0033680 FBgn0033680 FBtr0087981 CG13186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5199 chr3R 9627935 9628021 + 20 NA Intergenic Intergenic -3986 FBgn0051331 FBgn0051331 FBtr0082836 tRNA:CR31331 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3310 chr2RHet 1956970 1957045 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5845 chr3R 18706245 18706303 + 20 NA Intergenic Intergenic -18750 FBgn0017590 FBgn0017590 FBtr0084337 klg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5846 chr3R 18791321 18791375 + 20 NA promoter-TSS (FBgn0051281) protein_coding-promoter-TSS (FBgn0051281) -658 FBgn0051281 FBgn0051281 FBtr0310110 Tpl94D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3496 chr3L 1900423 1900477 + 20 NA TTS (FBgn0035290) protein_coding-TTS (FBgn0035290) 9747 FBgn0035290 FBgn0035290 FBtr0310545 CG1887 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6609 chr4 546098 546199 + 20 NA exon (FBgn0004607, exon 6 of 14) protein_coding-exon (FBgn0004607, exon 6 of 14) 23712 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_318 chr2L 4619727 4619840 + 20 NA Intergenic Intergenic -21513 FBgn0083938 FBgn0083938 FBtr0110769 BG642163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5622 chr3R 15312921 15312975 + 20 NA intron (FBgn0260003, intron 12 of 35) protein_coding-intron (FBgn0260003, intron 12 of 34) 3889 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1390 chr2L 18736810 18736864 + 20 NA Intergenic Intergenic 3169 FBgn0261806 FBgn0261806 FBtr0303282 CG42752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4466 chr3L 23211177 23211264 + 20 NA intron (FBgn0037212, intron 3 of 10) protein_coding-intron (FBgn0037212, intron 3 of 11) 11451 FBgn0037212 FBgn0037212 FBtr0308331 nAcRalpha-80B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5512 chr3R 13889714 13889768 + 20 NA Intergenic Intergenic -14658 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6603 chr4 423088 423142 + 20 NA Intergenic Intergenic -6687 FBgn0262636 FBgn0262636 FBtr0307044 Lin29 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3567 chr3L 3958786 3958840 + 20 NA exon (FBgn0035481, exon 3 of 3) protein_coding-exon (FBgn0035481, exon 3 of 3) 5164 FBgn0035481 FBgn0035481 FBtr0333138 CG12605 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6667 chr4 1210242 1210296 + 20 NA exon (FBgn0250819, exon 6 of 11) protein_coding-exon (FBgn0250819, exon 6 of 11) 3870 FBgn0250819 FBgn0250819 FBtr0308340 CG33521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4262 chr3L 17149354 17149423 + 20 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -10575 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_289 chr2L 4348089 4348143 + 20 NA Intergenic Intergenic 4380 FBgn0262375 FBgn0262375 FBtr0304206 mir-1005 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2444 chr2R 9185499 9185580 + 20 NA exon (FBgn0033826, exon 1 of 3) protein_coding-exon (FBgn0033826, exon 1 of 3) 433 FBgn0033826 FBgn0033826 FBtr0087754 CG4734 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4050 chr3L 13677013 13677120 + 20 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 63129 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4006 chr3L 12927898 12927952 + 20 NA Intergenic Intergenic 19822 FBgn0036325 FBgn0036325 FBtr0075903 CG10752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2867 chr2R 16232192 16232336 + 20 NA exon (FBgn0034506, exon 4 of 4) protein_coding-exon (FBgn0034506, exon 4 of 4) 914 FBgn0034506 FBgn0034506 FBtr0086288 CG13870 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2685 chr2R 13185497 13185551 + 20 NA exon (FBgn0261642, exon 3 of 3) protein_coding-exon (FBgn0261642, exon 3 of 3) 9283 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3716 chr3L 7084201 7084287 + 20 NA Intergenic Intergenic -2060 FBgn0035737 FBgn0035737 FBtr0076909 Cpr65Ec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_677 chr2L 10544846 10544949 + 20 NA promoter-TSS (FBgn0051721) protein_coding-promoter-TSS (FBgn0051721) 16 FBgn0051721 FBgn0051721 FBtr0304114 Trim9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3637 chr3L 6030986 6031072 + 20 NA exon (FBgn0035663, exon 1 of 1) protein_coding-exon (FBgn0035663, exon 1 of 1) 818 FBgn0035663 FBgn0035663 FBtr0077039 CG6462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4047 chr3L 13662038 13662092 + 20 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 48128 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2830 chr2R 15660047 15660101 + 20 NA Intergenic Intergenic -1336 FBgn0034473 FBgn0034473 FBtr0086344 Or56a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6027 chr3R 22507889 22507954 + 20 NA promoter-TSS (FBgn0250908) protein_coding-promoter-TSS (FBgn0250908) -233 FBgn0250908 FBgn0250908 FBtr0290328 beat-VII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2962 chr2R 18117058 18117149 + 20 NA Intergenic Intergenic -1379 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3638 chr3L 6041345 6041410 + 20 NA Intergenic Intergenic -2480 FBgn0035665 FBgn0035665 FBtr0077041 Jon65Aiii protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4172 chr3L 15838038 15838092 + 20 NA promoter-TSS (FBgn0052150) protein_coding-promoter-TSS (FBgn0052150) -1218 FBgn0052150 FBgn0052150 FBtr0306853 CG32150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4492 chr3L 23659619 23659708 + 20 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -48728 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6590 chr3RHet 2290790 2290870 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4339 chr3L 18056537 18056591 + 20 NA intron (FBgn0000568, intron 1 of 7) protein_coding-intron (FBgn0000568, intron 1 of 7) 1232 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1085 chr2L 15460601 15460681 + 20 NA Intergenic Intergenic 17628 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_253 chr2L 3827493 3827547 + 20 NA TTS (FBgn0003430) protein_coding-TTS (FBgn0003430) 1840 FBgn0003430 FBgn0003430 FBtr0077499 slp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4322 chr3L 17883449 17883503 + 20 NA exon (FBgn0036768, exon 5 of 6) protein_coding-exon (FBgn0036768, exon 5 of 6) 2671 FBgn0036768 FBgn0036768 FBtr0075143 CG7402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3690 chr3L 6913577 6913690 + 20 NA Intergenic Intergenic -6569 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7172 chrX 12837719 12837773 + 20 NA exon (FBgn0086675, exon 5 of 6) protein_coding-exon (FBgn0086675, exon 5 of 6) 5196 FBgn0086675 FBgn0086675 FBtr0333319 fne protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4578 chr3LHet 1939056 1939137 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5458 chr3R 13317398 13317452 + 20 NA intron (FBgn0261046, intron 8 of 34) protein_coding-intron (FBgn0261046, intron 9 of 34) 13964 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1713 chr2L 21980419 21980485 + 20 NA Intergenic Intergenic 12481 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3409 chr3L 414415 414492 + 20 NA Intergenic Intergenic 19453 FBgn0035139 FBgn0035139 FBtr0072566 CG13891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1437 chr2L 19328922 19328976 + 20 NA Intergenic Intergenic 28643 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_789 chr2L 12364465 12364519 + 20 NA intron (FBgn0262475, intron 5 of 9) protein_coding-intron (FBgn0262475, intron 5 of 9) 8051 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5749 chr3R 16716409 16716469 + 20 NA promoter-TSS (FBgn0051480) tRNA-promoter-TSS (FBgn0051480) 19 FBgn0051480 FBgn0051480 FBtr0083975 tRNA:CR31480 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5394 chr3R 12553844 12553898 + 20 NA intron (FBgn0003944, intron 1 of 3) protein_coding-intron (FBgn0003944, intron 1 of 3) 6477 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2695 chr2R 13379789 13379855 + 20 NA exon (FBgn0050104, exon 6 of 7) protein_coding-exon (FBgn0050104, exon 6 of 7) -1445 FBgn0050103 FBgn0050103 FBtr0086929 CG30103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2265 chr2R 6275763 6275902 + 20 NA exon (FBgn0261698, exon 2 of 29) protein_coding-exon (FBgn0261698, exon 2 of 29) -8218 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3128 chr2R 20983620 20983674 + 20 NA exon (FBgn0003715, exon 2 of 4) protein_coding-exon (FBgn0003715, exon 2 of 4) 3064 FBgn0003715 FBgn0003715 FBtr0330231 CG16778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4895 chr3R 4702502 4702556 + 20 NA intron (FBgn0262614, intron 2 of 13) protein_coding-intron (FBgn0262614, intron 2 of 13) 13874 FBgn0053551 FBgn0053551 FBtr0091521 tRNA:R:85Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_1740 chr2L 22074009 22074094 + 20 NA Intergenic Intergenic 2898 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_509 chr2L 8475758 8475859 + 20 NA intron (FBgn0262029, intron 1 of 8) protein_coding-intron (FBgn0262029, intron 1 of 8) -1541 FBgn0053194 FBgn0053194 FBtr0079676 CheA29a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_269 chr2L 4159761 4159816 + 20 NA Intergenic Intergenic 6346 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3599 chr3L 4935920 4935974 + 20 NA TTS (FBgn0005775) protein_coding-TTS (FBgn0005775) -4809 FBgn0263618 FBgn0263618 FBtr0309984 CR43627 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1857 chr2L 22705751 22705944 + 20 NA Intergenic Intergenic -14839 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4823 chr3R 3762761 3762820 + 20 NA intron (FBgn0000504, intron 2 of 4) protein_coding-intron (FBgn0000504, intron 2 of 4) 15125 FBgn0261453 FBgn0261453 FBtr0309754 scaRNA:mgU2-41 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5050 chr3R 7199045 7199126 + 20 NA exon (FBgn0004595, exon 4 of 8) protein_coding-exon (FBgn0004595, exon 4 of 8) -20232 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5282 chr3R 11385319 11385373 + 20 NA Intergenic Intergenic -6852 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5733 chr3R 16497662 16497738 + 20 NA exon (FBgn0038819, exon 2 of 2) protein_coding-exon (FBgn0038819, exon 2 of 2) 2407 FBgn0038819 FBgn0038819 FBtr0083919 Cpr92F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5374 chr3R 12329998 12330052 + 20 NA intron (FBgn0259244, intron 1 of 15) protein_coding-intron (FBgn0259244, intron 1 of 16) 1502 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_996 chr2L 14671677 14671731 + 20 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 17621 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4414 chr3L 20414943 20415032 + 20 NA exon (FBgn0036985, exon 4 of 4) protein_coding-exon (FBgn0036985, exon 4 of 4) 4184 FBgn0036986 FBgn0036986 FBtr0078233 CG5282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4205 chr3L 16268583 16268637 + 20 NA Intergenic Intergenic -1925 FBgn0036590 FBgn0036590 FBtr0075468 CG13065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1231 chr2L 17047349 17047418 + 20 NA exon (FBgn0032625, exon 2 of 2) protein_coding-exon (FBgn0032625, exon 2 of 2) 898 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4469 chr3L 23310705 23310799 + 20 NA TTS (FBgn0010215) protein_coding-TTS (FBgn0010215) 20448 FBgn0010215 FBgn0010215 FBtr0070038 alpha-Cat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_822 chr2L 12748424 12748478 + 20 NA Intergenic Intergenic 13389 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4068 chr3L 13978290 13978427 + 20 NA exon (FBgn0036391, exon 2 of 6) protein_coding-exon (FBgn0036391, exon 2 of 6) -1362 FBgn0036393 FBgn0036393 FBtr0333024 CG17362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3238 chr2RHet 1443640 1443757 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2016 chr2R 2139088 2139142 + 20 NA exon (FBgn0033075, exon 4 of 9) protein_coding-exon (FBgn0033075, exon 4 of 9) 6074 FBgn0033075 FBgn0033075 FBtr0114492 Pld protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5303 chr3R 11582829 11582884 + 20 NA Intergenic Intergenic -5981 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_27 chr2L 730205 730303 + 20 NA exon (FBgn0011244, exon 1 of 1) protein_coding-exon (FBgn0011244, exon 1 of 1) 1842 FBgn0011244 FBgn0011244 FBtr0078000 Hsp60B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6072 chr3R 23135199 23135275 + 20 NA exon (FBgn0039510, exon 18 of 32) protein_coding-exon (FBgn0039510, exon 18 of 32) 12810 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6101 chr3R 23340021 23340075 + 20 NA Intergenic Intergenic 2931 FBgn0039522 FBgn0039522 FBtr0085212 CG13972 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2347 chr2R 7659608 7659697 + 20 NA intron (FBgn0033652, intron 1 of 3) protein_coding-intron (FBgn0033652, intron 1 of 3) 3694 FBgn0033650 FBgn0033650 FBtr0088029 CG13193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4274 chr3L 17257871 17257925 + 20 NA TTS (FBgn0264462) ncRNA-TTS (FBgn0264462) 382 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3838 chr3L 9876092 9876155 + 20 NA exon (FBgn0085411, exon 4 of 4) protein_coding-exon (FBgn0085411, exon 4 of 4) 4038 FBgn0085411 FBgn0085411 FBtr0332687 CG34382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6607 chr4 536992 537055 + 20 NA intron (FBgn0004607, intron 3 of 12) protein_coding-intron (FBgn0004607, intron 3 of 13) 14587 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2947 chr2R 17688774 17688864 + 20 NA promoter-TSS (FBgn0034661) protein_coding-promoter-TSS (FBgn0034661) -414 FBgn0034661 FBgn0034661 FBtr0071743 CG4386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3527 chr3L 2796477 2796593 + 20 NA exon (FBgn0263392, exon 5 of 10) protein_coding-exon (FBgn0263392, exon 5 of 10) 14280 FBgn0035375 FBgn0035375 FBtr0333442 pgant6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3669 chr3L 6627408 6627462 + 20 NA exon (FBgn0004619, exon 12 of 13) protein_coding-exon (FBgn0004619, exon 12 of 13) 10303 FBgn0004619 FBgn0004619 FBtr0076982 Glu-RI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6311 chr3R 25366269 25366323 + 20 NA Intergenic Intergenic 5938 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1158 chr2L 16204208 16204289 + 20 NA Intergenic Intergenic -7211 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4967 chr3R 6129726 6129780 + 20 NA exon (FBgn0262617, exon 13 of 14) protein_coding-exon (FBgn0262617, exon 13 of 14) 7564 FBgn0037807 FBgn0037807 FBtr0082240 CG6293 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4199 chr3L 16234287 16234363 + 20 NA Intergenic Intergenic 3502 FBgn0263608 FBgn0263608 FBtr0075460 l(3)72Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6980 chrX 1302998 1303071 + 20 NA promoter-TSS (FBgn0259108) protein_coding-promoter-TSS (FBgn0259108) -68 FBgn0259108 FBgn0259108 FBtr0112628 futsch protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1933 chr2R 468687 468741 + 20 NA Intergenic Intergenic -14084 FBgn0260799 FBgn0260799 FBtr0111114 p120ctn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4563 chr3LHet 1091157 1091228 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_78 chr2L 1139475 1139586 + 20 NA exon (FBgn0031306, exon 4 of 5) protein_coding-exon (FBgn0031306, exon 4 of 5) -3671 FBgn0031307 FBgn0031307 FBtr0077958 MFS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1044 chr2L 15087481 15087561 + 20 NA exon (FBgn0028879, exon 3 of 17) protein_coding-exon (FBgn0028879, exon 3 of 17) 12745 FBgn0028879 FBgn0028879 FBtr0332180 CG15270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3028 chr2R 19195632 19195714 + 20 NA TTS (FBgn0034842) protein_coding-TTS (FBgn0034842) 1666 FBgn0034842 FBgn0034842 FBtr0072045 Prosbeta5R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2662 chr2R 12587510 12587585 + 20 NA intron (FBgn0050463, intron 2 of 10) protein_coding-intron (FBgn0050463, intron 3 of 11) 8344 FBgn0013763 FBgn0013763 FBtr0087111 CG5210 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3012 chr2R 18917526 18917580 + 20 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) 12909 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5313 chr3R 11688877 11688947 + 20 NA exon (FBgn0051183, exon 4 of 8) protein_coding-exon (FBgn0051183, exon 4 of 8) 2994 FBgn0038377 FBgn0038377 FBtr0083186 CG9632 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1067 chr2L 15324500 15324560 + 20 NA Intergenic Intergenic -5629 FBgn0041103 FBgn0041103 FBtr0300021 nht protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6129 chr3R 23631907 23631961 + 20 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -38877 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3590 chr3L 4589796 4589850 + 20 NA exon (FBgn0260657, exon 7 of 8) protein_coding-exon (FBgn0260657, exon 7 of 8) -31442 FBgn0052246 FBgn0052246 FBtr0302941 CG32246 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1094 chr2L 15527050 15527166 + 20 NA Intergenic Intergenic 4670 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6862 chrUextra 187157 187294 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3951 chr3L 12063425 12063526 + 20 NA exon (FBgn0250876, exon 8 of 12) protein_coding-exon (FBgn0250876, exon 8 of 12) -5516 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6240 chr3R 24582319 24582374 + 20 NA TTS (FBgn0039598) protein_coding-TTS (FBgn0039598) 355 FBgn0039597 FBgn0039597 FBtr0085314 CG9997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5195 chr3R 9561238 9561322 + 20 NA promoter-TSS (FBgn0085412) protein_coding-promoter-TSS (FBgn0085412) -17382 FBgn0038175 FBgn0038175 FBtr0082838 CG9602 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2393 chr2R 8361935 8362015 + 20 NA promoter-TSS (FBgn0033744) protein_coding-promoter-TSS (FBgn0033744) 26 FBgn0033744 FBgn0033744 FBtr0087936 Dh44-R2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3726 chr3L 7309563 7309662 + 20 NA Intergenic Intergenic -3556 FBgn0035760 FBgn0035760 FBtr0076837 CG8607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4091 chr3L 14290427 14290481 + 20 NA intron (FBgn0001085, intron 1 of 4) protein_coding-intron (FBgn0001085, intron 1 of 4) 23011 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1909 chr2LHet 207672 207744 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1583 chr2L 20840588 20840642 + 20 NA promoter-TSS (FBgn0051676) protein_coding-promoter-TSS (FBgn0051676) -185 FBgn0051676 FBgn0051676 FBtr0081424 CG31676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2922 chr2R 17283227 17283281 + 20 NA intron (FBgn0010415, intron 3 of 4) protein_coding-intron (FBgn0010415, intron 4 of 5) 6353 FBgn0034629 FBgn0034629 FBtr0071607 Acox57D-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5141 chr3R 8731557 8731649 + 20 NA Intergenic Intergenic 5411 FBgn0038090 FBgn0038090 FBtr0082685 CG10909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4337 chr3L 18027134 18027188 + 20 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -6256 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6713 chrU 201366 201420 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6312 chr3R 25368266 25368342 + 20 NA Intergenic Intergenic 7946 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4981 chr3R 6389337 6389391 + 20 NA intron (FBgn0001235, intron 5 of 12) protein_coding-intron (FBgn0001235, intron 5 of 11) 42028 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1342 chr2L 18074368 18074476 + 20 NA Intergenic Intergenic -3847 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5029 chr3R 7011940 7011999 + 20 NA Intergenic Intergenic -9857 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1705 chr2L 21961995 21962049 + 20 NA Intergenic Intergenic 30911 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3190 chr2RHet 604397 604451 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4648 chr3R 1239477 1239544 + 20 NA promoter-TSS (FBgn0037326) protein_coding-promoter-TSS (FBgn0037326) -765 FBgn0037326 FBgn0037326 FBtr0078679 CG14669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1922 chr2R 182966 183020 + 20 NA Intergenic Intergenic -52549 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1134 chr2L 16010404 16010467 + 20 NA intron (FBgn0028644, intron 1 of 7) protein_coding-intron (FBgn0028644, intron 1 of 7) -4156 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1965 chr2R 853861 853915 + 20 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 16716 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5646 chr3R 15554426 15554514 + 20 NA Intergenic Intergenic -2211 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1035 chr2L 14994966 14995038 + 20 NA intron (FBgn0086711, intron 1 of 5) protein_coding-intron (FBgn0086711, intron 1 of 7) 2557 FBgn0086711 FBgn0086711 FBtr0332521 mol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4973 chr3R 6296454 6296508 + 20 NA Intergenic Intergenic 35970 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_232 chr2L 3557117 3557171 + 20 NA Intergenic Intergenic 17409 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6299 chr3R 25240949 25241020 + 20 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -64436 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6413 chr3R 26494340 26494404 + 20 NA Intergenic Intergenic 18689 FBgn0085462 FBgn0085462 FBtr0304711 CG34433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3785 chr3L 8603326 8603380 + 20 NA exon (FBgn0035914, exon 2 of 6) protein_coding-exon (FBgn0035914, exon 2 of 6) 5596 FBgn0035914 FBgn0035914 FBtr0330165 CG6282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3007 chr2R 18837673 18837762 + 20 NA TTS (FBgn0052835) ncRNA-TTS (FBgn0052835) 3606 FBgn0052835 FBgn0052835 FBtr0308941 CR32835 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3286 chr2RHet 1911244 1911317 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5748 chr3R 16701867 16701983 + 20 NA Intergenic Intergenic -1533 FBgn0044809 FBgn0044809 FBtr0083974 TotZ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4801 chr3R 3241799 3241876 + 20 NA Intergenic Intergenic -2883 FBgn0051544 FBgn0051544 FBtr0081532 CG31544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1769 chr2L 22221805 22221905 + 20 NA Intergenic Intergenic -4296 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7083 chrX 7040747 7040806 + 20 NA exon (FBgn0047092, exon 3 of 3) ncRNA-exon (FBgn0047092, exon 3 of 3) 3107 FBgn0047092 FBgn0047092 FBtr0071016 CR32730 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5503 chr3R 13757400 13757454 + 20 NA promoter-TSS (FBgn0263995) protein_coding-promoter-TSS (FBgn0263995) -12401 FBgn0263995 FBgn0263995 FBtr0330280 cpo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5178 chr3R 9323504 9323558 + 20 NA Intergenic Intergenic 25726 FBgn0038157 FBgn0038157 FBtr0082791 CG12538 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6085 chr3R 23196440 23196533 + 20 NA promoter-TSS (FBgn0263453) ncRNA-promoter-TSS (FBgn0263453) -899 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1529 chr2L 20397631 20397719 + 20 NA intron (FBgn0032857, intron 1 of 1) protein_coding-intron (FBgn0032857, intron 1 of 1) 1719 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6410 chr3R 26439582 26439657 + 20 NA Intergenic Intergenic 7708 FBgn0051016 FBgn0051016 FBtr0300962 CG31016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5978 chr3R 22109704 22109800 + 20 NA Intergenic Intergenic 21368 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1535 chr2L 20470485 20470585 + 20 NA Intergenic Intergenic 2804 FBgn0262878 FBgn0262878 FBtr0306287 CG43233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3743 chr3L 7626657 7626711 + 20 NA exon (FBgn0035802, exon 1 of 9) protein_coding-exon (FBgn0035802, exon 1 of 9) -6133 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5319 chr3R 11752107 11752164 + 20 NA exon (FBgn0085305, exon 2 of 2) protein_coding-exon (FBgn0085305, exon 2 of 2) 784 FBgn0085305 FBgn0085305 FBtr0112471 CG34276 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2561 chr2R 11069242 11069296 + 20 NA intron (FBgn0013467, intron 4 of 4) protein_coding-intron (FBgn0013467, intron 2 of 2) -3394 FBgn0262478 FBgn0262478 FBtr0304816 CG43068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_237 chr2L 3596525 3596607 + 20 NA Intergenic Intergenic -6265 FBgn0264371 FBgn0264371 FBtr0332223 CR43823 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_488 chr2L 7918016 7918090 + 20 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -27459 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_818 chr2L 12685728 12685785 + 20 NA exon (FBgn0004394, exon 5 of 5) protein_coding-exon (FBgn0004394, exon 5 of 5) 7150 FBgn0004394 FBgn0004394 FBtr0080393 pdm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1928 chr2R 284204 284291 + 20 NA intron (FBgn0260798, intron 8 of 15) protein_coding-intron (FBgn0260798, intron 7 of 14) 74311 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1905 chr2LHet 192826 192893 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4871 chr3R 4368867 4368954 + 20 NA Intergenic Intergenic -9420 FBgn0037594 FBgn0037594 FBtr0081872 Or85d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_912 chr2L 14144329 14144383 + 20 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 9865 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3266 chr2RHet 1875878 1875957 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2287 chr2R 6815002 6815056 + 20 NA Intergenic Intergenic 14177 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2566 chr2R 11120627 11120681 + 20 NA intron (FBgn0259878, intron 6 of 8) protein_coding-intron (FBgn0259878, intron 6 of 8) 8430 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6287 chr3R 25163244 25163321 + 20 NA Intergenic Intergenic -17946 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_907 chr2L 14126757 14126811 + 20 NA Intergenic Intergenic -7707 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7138 chrX 10563308 10563362 + 20 NA intron (FBgn0052677, intron 2 of 12) protein_coding-intron (FBgn0052677, intron 2 of 14) 4164 FBgn0030224 FBgn0030224 FBtr0071504 CG12637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_285 chr2L 4324590 4324703 + 20 NA promoter-TSS (FBgn0028482) protein_coding-promoter-TSS (FBgn0028482) 73 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4776 chr3R 3000005 3000059 + 20 NA exon (FBgn0002306, exon 3 of 10) protein_coding-exon (FBgn0002306, exon 3 of 10) 11481 FBgn0002306 FBgn0002306 FBtr0081571 sas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5983 chr3R 22131800 22131880 + 20 NA Intergenic Intergenic 19157 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4556 chr3LHet 875646 875700 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1145 chr2L 16078415 16078469 + 20 NA intron (FBgn0013433, intron 5 of 7) protein_coding-intron (FBgn0013433, intron 5 of 7) -16567 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6178 chr3R 24047079 24047236 + 20 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 42187 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3542 chr3L 3072405 3072466 + 20 NA promoter-TSS (FBgn0035397) protein_coding-promoter-TSS (FBgn0035397) -772 FBgn0035397 FBgn0035397 FBtr0072996 CG11486 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2843 chr2R 15886084 15886138 + 20 NA Intergenic Intergenic 1762 FBgn0050212 FBgn0050212 FBtr0086326 tRNA:CR30212 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5539 chr3R 14184321 14184375 + 20 NA intron (FBgn0038606, intron 1 of 3) protein_coding-intron (FBgn0038606, intron 1 of 3) 2351 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4534 chr3L 24123256 24123310 + 20 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 55954 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4260 chr3L 17143184 17143247 + 20 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -16748 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5593 chr3R 14814865 14814919 + 20 NA intron (FBgn0026239, intron 1 of 6) protein_coding-intron (FBgn0026239, intron 1 of 4) 5145 FBgn0026239 FBgn0026239 FBtr0112924 gukh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1710 chr2L 21974518 21974587 + 20 NA Intergenic Intergenic 18381 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5338 chr3R 11947587 11947662 + 20 NA Intergenic Intergenic -6827 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3288 chr2RHet 1915681 1915745 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_215 chr2L 3226408 3226462 + 20 NA Intergenic Intergenic -26815 FBgn0085422 FBgn0085422 FBtr0112637 CG34393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7096 chrX 7894127 7894181 + 20 NA intron (FBgn0010329, intron 2 of 7) protein_coding-intron (FBgn0010329, intron 2 of 7) 4424 FBgn0010329 FBgn0010329 FBtr0089999 Tbh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2816 chr2R 15531738 15531792 + 20 NA TTS (FBgn0034461) protein_coding-TTS (FBgn0034461) 1313 FBgn0034461 FBgn0034461 FBtr0086470 CG15124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_614 chr2L 8979006 8979071 + 20 NA exon (FBgn0032084, exon 4 of 7) protein_coding-exon (FBgn0032084, exon 4 of 7) -1621 FBgn0040963 FBgn0040963 FBtr0079760 CG18662 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2131 chr2R 4468640 4468694 + 20 NA exon (FBgn0259226, exon 3 of 6) protein_coding-exon (FBgn0259226, exon 3 of 6) -2676 FBgn0259226 FBgn0259226 FBtr0299788 CG42326 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5372 chr3R 12319456 12319510 + 20 NA intron (FBgn0038439, intron 1 of 11) protein_coding-intron (FBgn0038439, intron 1 of 11) 1658 FBgn0038439 FBgn0038439 FBtr0301702 Cad89D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6292 chr3R 25180243 25180393 + 20 NA Intergenic Intergenic -34982 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5452 chr3R 13275269 13275328 + 20 NA promoter-TSS (FBgn0000564) protein_coding-promoter-TSS (FBgn0000564) -48 FBgn0000564 FBgn0000564 FBtr0083444 Eh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_383 chr2L 5691062 5691127 + 20 NA Intergenic Intergenic 12456 FBgn0031729 FBgn0031729 FBtr0305128 CG12511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4816 chr3R 3631301 3631366 + 20 NA TTS (FBgn0037521) protein_coding-TTS (FBgn0037521) -1179 FBgn0037520 FBgn0037520 FBtr0081772 CG18268 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2283 chr2R 6675079 6675133 + 20 NA intron (FBgn0053144, intron 1 of 7) protein_coding-intron (FBgn0053144, intron 1 of 7) -3858 FBgn0050018 FBgn0050018 FBtr0304706 mthl13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5272 chr3R 11249783 11249862 + 20 NA exon (FBgn0038339, exon 3 of 5) protein_coding-exon (FBgn0038339, exon 3 of 5) -6317 FBgn0262397 FBgn0262397 FBtr0304297 mir-2c pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4822 chr3R 3758662 3758754 + 20 NA intron (FBgn0000504, intron 3 of 4) protein_coding-intron (FBgn0000504, intron 3 of 4) 11043 FBgn0261453 FBgn0261453 FBtr0309754 scaRNA:mgU2-41 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5398 chr3R 12575411 12575483 + 20 NA intron (FBgn0020556, intron 1 of 2) ncRNA-intron (FBgn0020556, intron 2 of 2) 1609 FBgn0063261 FBgn0063261 FBtr0083345 CG31275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5564 chr3R 14424034 14424088 + 20 NA promoter-TSS (FBgn0038630) protein_coding-promoter-TSS (FBgn0038630) -417 FBgn0038630 FBgn0038630 FBtr0083636 CG14305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2117 chr2R 4214903 4215024 + 20 NA promoter-TSS (FBgn0261588) protein_coding-promoter-TSS (FBgn0261588) -42 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_858 chr2L 13281318 13281401 + 20 NA exon (FBgn0032498, exon 1 of 1) protein_coding-exon (FBgn0032498, exon 1 of 1) 3983 FBgn0032498 FBgn0032498 FBtr0080459 CG6108 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3145 chr2RHet 81262 81316 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2751 chr2R 14270492 14270546 + 20 NA promoter-TSS (FBgn0034329) protein_coding-promoter-TSS (FBgn0034329) 218 FBgn0034328 FBgn0034328 FBtr0086729 IM23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_693 chr2L 10708316 10708408 + 20 NA Intergenic Intergenic -2172 FBgn0024740 FBgn0024740 FBtr0080123 Lip2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3983 chr3L 12585183 12585237 + 20 NA intron (FBgn0015904, intron 3 of 4) protein_coding-intron (FBgn0015904, intron 3 of 4) 11438 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5882 chr3R 19674296 19674353 + 20 NA exon (FBgn0085384, exon 10 of 13) protein_coding-exon (FBgn0085384, exon 10 of 13) 11028 FBgn0004185 FBgn0004185 FBtr0084528 snRNA:U1:95Ca snRNA Nup98-S2-pascual-garcia2017_R1_peak_4806 chr3R 3421342 3421429 + 20 NA intron (FBgn0083963, intron 4 of 12) protein_coding-intron (FBgn0083963, intron 4 of 12) 43771 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1432 chr2L 19312968 19313036 + 20 NA Intergenic Intergenic 12696 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5887 chr3R 19801019 19801073 + 20 NA exon (FBgn0051140, exon 8 of 17) protein_coding-exon (FBgn0051140, exon 8 of 17) -8179 FBgn0051451 FBgn0051451 FBtr0308922 CR31451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_173 chr2L 2352831 2352931 + 20 NA exon (FBgn0031414, exon 9 of 14) protein_coding-exon (FBgn0031414, exon 9 of 14) 4475 FBgn0031413 FBgn0031413 FBtr0077799 CG9967 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6035 chr3R 22532097 22532151 + 20 NA intron (FBgn0023179, intron 1 of 11) protein_coding-intron (FBgn0023179, intron 1 of 11) 7757 FBgn0023179 FBgn0023179 FBtr0085048 amon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1138 chr2L 16045840 16045937 + 20 NA exon (FBgn0000182, exon 8 of 11) protein_coding-exon (FBgn0000182, exon 8 of 11) 1336 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_723 chr2L 11306681 11306786 + 20 NA Intergenic Intergenic -1020 FBgn0263874 FBgn0263874 FBtr0329848 CR43721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5529 chr3R 14061854 14061940 + 20 NA promoter-TSS (FBgn0011701) protein_coding-promoter-TSS (FBgn0011701) -19 FBgn0011701 FBgn0011701 FBtr0083564 repo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6128 chr3R 23628651 23628731 + 20 NA intron (FBgn0085382, intron 4 of 11) protein_coding-intron (FBgn0085382, intron 4 of 11) -42120 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5740 chr3R 16572882 16573019 + 20 NA TTS (FBgn0017557) protein_coding-TTS (FBgn0017557) 1846 FBgn0017557 FBgn0017557 FBtr0083928 Pros28.1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2397 chr2R 8553417 8553522 + 20 NA promoter-TSS (FBgn0261673) protein_coding-promoter-TSS (FBgn0261673) -167 FBgn0261673 FBgn0261673 FBtr0087868 nemy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_668 chr2L 10124342 10124428 + 20 NA intron (FBgn0083945, intron 12 of 12) protein_coding-intron (FBgn0083945, intron 12 of 12) -1614 FBgn0032184 FBgn0032184 FBtr0079966 CG13135 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4741 chr3R 2620562 2620621 + 20 NA intron (FBgn0000439, intron 3 of 4) protein_coding-intron (FBgn0000439, intron 3 of 4) 3033 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5030 chr3R 7012849 7012917 + 20 NA Intergenic Intergenic -8943 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3211 chr2RHet 853376 853482 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6194 chr3R 24206104 24206220 + 20 NA Intergenic Intergenic 28198 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_55 chr2L 959737 959821 + 20 NA Intergenic Intergenic 36986 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_223 chr2L 3395820 3395926 + 20 NA Intergenic Intergenic -2150 FBgn0085204 FBgn0085204 FBtr0112366 CG34175 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5772 chr3R 17101666 17101765 + 20 NA TTS (FBgn0038880) protein_coding-TTS (FBgn0038880) 258 FBgn0038878 FBgn0038878 FBtr0084100 CG3301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5626 chr3R 15365759 15365813 + 20 NA intron (FBgn0260003, intron 2 of 14) protein_coding-intron (FBgn0260003, intron 22 of 34) -46132 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5843 chr3R 18669331 18669385 + 20 NA TTS (FBgn0039029) protein_coding-TTS (FBgn0039029) 1676 FBgn0039029 FBgn0039029 FBtr0084314 CG4704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5177 chr3R 9301794 9301848 + 20 NA Intergenic Intergenic -9993 FBgn0040554 FBgn0040554 FBtr0309274 CR17025 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3316 chr2RHet 1987085 1987159 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3444 chr3L 910076 910133 + 20 NA exon (FBgn0028999, exon 1 of 1) protein_coding-exon (FBgn0028999, exon 1 of 1) 992 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5976 chr3R 22104037 22104091 + 20 NA Intergenic Intergenic 15680 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5545 chr3R 14282508 14282619 + 20 NA intron (FBgn0004652, intron 2 of 7) protein_coding-intron (FBgn0004652, intron 2 of 7) -45210 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4700 chr3R 2118978 2119034 + 20 NA TTS (FBgn0037422) protein_coding-TTS (FBgn0037422) 1382 FBgn0037422 FBgn0037422 FBtr0078605 Osi13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4558 chr3LHet 917611 917706 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5080 chr3R 7887228 7887301 + 20 NA exon (FBgn0037988, exon 4 of 5) protein_coding-exon (FBgn0037988, exon 4 of 5) 1402 FBgn0037988 FBgn0037988 FBtr0082552 CG14740 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6961 chrUextra 26930162 26930216 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_529 chr2L 8583556 8583610 + 20 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 10906 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3839 chr3L 9876313 9876367 + 20 NA exon (FBgn0085411, exon 4 of 4) protein_coding-exon (FBgn0085411, exon 4 of 4) 4255 FBgn0085411 FBgn0085411 FBtr0332687 CG34382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_47 chr2L 899060 899114 + 20 NA exon (FBgn0002563, exon 2 of 2) protein_coding-exon (FBgn0002563, exon 2 of 2) 443 FBgn0002563 FBgn0002563 FBtr0078025 Lsp1beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1329 chr2L 17950533 17950621 + 20 NA Intergenic Intergenic -12837 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1005 chr2L 14734538 14734616 + 20 NA Intergenic Intergenic -1266 FBgn0051835 FBgn0051835 FBtr0080667 CG31835 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1284 chr2L 17559394 17559511 + 20 NA Intergenic Intergenic -3687 FBgn0032650 FBgn0032650 FBtr0080990 CG7094 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2543 chr2R 10724228 10724282 + 20 NA Intergenic Intergenic 3917 FBgn0033970 FBgn0033970 FBtr0087447 CG10205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5292 chr3R 11440465 11440655 + 20 NA Intergenic Intergenic -20630 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4451 chr3L 22025664 22025756 + 20 NA Intergenic Intergenic -2393 FBgn0004514 FBgn0004514 FBtr0301930 Oct-TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3277 chr2RHet 1900979 1901056 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4324 chr3L 17886967 17887076 + 20 NA intron (FBgn0036769, intron 2 of 7) protein_coding-intron (FBgn0036769, intron 2 of 6) 1941 FBgn0036769 FBgn0036769 FBtr0075155 Tsp74F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1388 chr2L 18715714 18715819 + 20 NA exon (FBgn0032707, exon 2 of 2) protein_coding-exon (FBgn0032707, exon 2 of 2) -2003 FBgn0032706 FBgn0032706 FBtr0114486 Irk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3889 chr3L 10713927 10713981 + 20 NA Intergenic Intergenic -23977 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5927 chr3R 21528180 21528234 + 20 NA intron (FBgn0051092, intron 4 of 6) protein_coding-intron (FBgn0051092, intron 8 of 10) -15115 FBgn0039360 FBgn0039360 FBtr0084931 CLS protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2635 chr2R 12290547 12290601 + 20 NA intron (FBgn0264273, intron 2 of 15) protein_coding-intron (FBgn0264273, intron 1 of 13) 16329 FBgn0029154 FBgn0029154 FBtr0100116 Menl-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5407 chr3R 12630025 12630079 + 20 NA Intergenic Intergenic 16019 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_91 chr2L 1286848 1286938 + 20 NA exon (FBgn0041097, exon 7 of 12) protein_coding-exon (FBgn0041097, exon 7 of 12) 30467 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2854 chr2R 16035092 16035146 + 20 NA TTS (FBgn0034481) protein_coding-TTS (FBgn0034481) 1481 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5502 chr3R 13756592 13756646 + 20 NA promoter-TSS (FBgn0263995) protein_coding-promoter-TSS (FBgn0263995) -13209 FBgn0263995 FBgn0263995 FBtr0330280 cpo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4352 chr3L 18188548 18188671 + 20 NA Intergenic Intergenic -5985 FBgn0036782 FBgn0036782 FBtr0310156 CG7320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_820 chr2L 12746036 12746133 + 20 NA Intergenic Intergenic 15756 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5607 chr3R 15090878 15090953 + 20 NA Intergenic Intergenic 7927 FBgn0038695 FBgn0038695 FBtr0083738 CG14280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2171 chr2R 4907234 4907303 + 20 NA TTS (FBgn0033364) protein_coding-TTS (FBgn0033364) 1908 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3633 chr3L 5997728 5997792 + 20 NA intron (FBgn0052406, intron 1 of 6) protein_coding-intron (FBgn0052406, intron 1 of 6) 6361 FBgn0035657 FBgn0035657 FBtr0077069 alphaKap4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5980 chr3R 22115926 22116053 + 20 NA Intergenic Intergenic 27605 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3575 chr3L 4190181 4190236 + 20 NA exon (FBgn0003710, exon 2 of 3) protein_coding-exon (FBgn0003710, exon 2 of 3) 1709 FBgn0003710 FBgn0003710 FBtr0073219 tipE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5053 chr3R 7216469 7216577 + 20 NA intron (FBgn0004595, intron 6 of 7) protein_coding-intron (FBgn0004595, intron 6 of 7) -17096 FBgn0037892 FBgn0037892 FBtr0082384 mRpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3974 chr3L 12456334 12456388 + 20 NA exon (FBgn0000625, exon 5 of 5) protein_coding-exon (FBgn0000625, exon 5 of 5) 4760 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5826 chr3R 18153065 18153119 + 20 NA Intergenic Intergenic -1931 FBgn0038941 FBgn0038941 FBtr0084203 CG7080 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5073 chr3R 7728627 7728696 + 20 NA intron (FBgn0037963, intron 3 of 15) protein_coding-intron (FBgn0037963, intron 3 of 15) 5357 FBgn0085336 FBgn0085336 FBtr0301079 CG34307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1544 chr2L 20517549 20517642 + 20 NA Intergenic Intergenic 22489 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5500 chr3R 13739740 13739822 + 20 NA intron (FBgn0053547, intron 2 of 24) protein_coding-intron (FBgn0053547, intron 2 of 26) 2519 FBgn0053547 FBgn0053547 FBtr0305019 Rim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2740 chr2R 14124313 14124390 + 20 NA TTS (FBgn0000658) protein_coding-TTS (FBgn0000658) 4083 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3798 chr3L 8779808 8779864 + 20 NA exon (FBgn0261259, exon 10 of 17) protein_coding-exon (FBgn0261259, exon 10 of 17) 1809 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5428 chr3R 12777349 12777403 + 20 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -20041 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2153 chr2R 4685766 4685820 + 20 NA promoter-TSS (FBgn0024189) protein_coding-promoter-TSS (FBgn0024189) -229 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1732 chr2L 22055096 22055174 + 20 NA promoter-TSS (FBgn0085202) protein_coding-promoter-TSS (FBgn0085202) -890 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2203 chr2R 5423797 5423851 + 20 NA exon (FBgn0259246, exon 19 of 22) protein_coding-exon (FBgn0259246, exon 19 of 22) 11816 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_540 chr2L 8628525 8628608 + 20 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 8538 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1827 chr2L 22593451 22593530 + 20 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 51037 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2708 chr2R 13543134 13543188 + 20 NA Intergenic Intergenic -1360 FBgn0050106 FBgn0050106 FBtr0086893 CCHa1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7168 chrX 12771780 12771839 + 20 NA intron (FBgn0259171, intron 2 of 9) protein_coding-intron (FBgn0259171, intron 2 of 9) 19055 FBgn0259171 FBgn0259171 FBtr0333524 Pde9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4440 chr3L 21597567 21597621 + 20 NA intron (FBgn0261953, intron 1 of 7) protein_coding-intron (FBgn0261953, intron 1 of 7) 9897 FBgn0264568 FBgn0264568 FBtr0333469 CR43940 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6537 chr3R 27843476 27843548 + 20 NA Intergenic Intergenic -20583 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6574 chr3RHet 1675321 1675375 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5742 chr3R 16579782 16579836 + 20 NA TTS (FBgn0259222) protein_coding-TTS (FBgn0259222) -2642 FBgn0038826 FBgn0038826 FBtr0113255 CG17838 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2475 chr2R 9572591 9572676 + 20 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 8241 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1396 chr2L 18802523 18802611 + 20 NA Intergenic Intergenic 2780 FBgn0264362 FBgn0264362 FBtr0332209 CG43814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1234 chr2L 17071566 17071644 + 20 NA Intergenic Intergenic -14045 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3201 chr2RHet 706582 706657 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4410 chr3L 20282578 20282682 + 20 NA intron (FBgn0052227, intron 1 of 9) protein_coding-intron (FBgn0052227, intron 1 of 9) 1622 FBgn0264482 FBgn0264482 FBtr0332777 CG43890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3923 chr3L 11505655 11505739 + 20 NA exon (FBgn0003373, exon 2 of 2) protein_coding-exon (FBgn0003373, exon 2 of 2) 376 FBgn0003373 FBgn0003373 FBtr0076096 Sgs3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_205 chr2L 3081918 3081972 + 20 NA intron (FBgn0015600, intron 4 of 8) protein_coding-intron (FBgn0015600, intron 6 of 10) 23483 FBgn0027571 FBgn0027571 FBtr0290093 CG3523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_982 chr2L 14617065 14617145 + 20 NA exon (FBgn0000056, exon 4 of 6) protein_coding-exon (FBgn0000056, exon 4 of 6) 836 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1766 chr2L 22208193 22208283 + 20 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 6027 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4516 chr3L 23949545 23949629 + 20 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 29923 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2730 chr2R 13949631 13949779 + 20 NA promoter-TSS (FBgn0085415) protein_coding-promoter-TSS (FBgn0085415) -504 FBgn0085415 FBgn0085415 FBtr0112627 CG34386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4207 chr3L 16303782 16303836 + 20 NA exon (FBgn0052160, exon 2 of 2) ncRNA-exon (FBgn0052160, exon 2 of 2) 1769 FBgn0052160 FBgn0052160 FBtr0308930 CR32160 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_116 chr2L 1457850 1457904 + 20 NA Intergenic Intergenic 15151 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1313 chr2L 17809856 17809982 + 20 NA intron (FBgn0262018, intron 5 of 14) protein_coding-intron (FBgn0262018, intron 4 of 13) 2753 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1945 chr2R 762883 762937 + 20 NA Intergenic Intergenic 46185 FBgn0033000 FBgn0033000 FBtr0299923 CG14464 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4384 chr3L 19130577 19130631 + 20 NA intron (FBgn0036851, intron 1 of 4) protein_coding-intron (FBgn0036851, intron 1 of 4) 1471 FBgn0036851 FBgn0036851 FBtr0330092 CG14082 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1088 chr2L 15486440 15486494 + 20 NA TTS (FBgn0020371) protein_coding-TTS (FBgn0020371) 1699 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4272 chr3L 17246292 17246377 + 20 NA exon (FBgn0036704, exon 1 of 1) protein_coding-exon (FBgn0036704, exon 1 of 1) 703 FBgn0036704 FBgn0036704 FBtr0075250 CG6497 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1020 chr2L 14872246 14872337 + 20 NA promoter-TSS (FBgn0032553) protein_coding-promoter-TSS (FBgn0032553) -269 FBgn0032553 FBgn0032553 FBtr0304004 CG4480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3372 chr2RHet 2347115 2347169 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3581 chr3L 4372133 4372216 + 20 NA intron (FBgn0035538, intron 2 of 4) protein_coding-intron (FBgn0035538, intron 2 of 4) -4716 FBgn0035537 FBgn0035537 FBtr0073338 CG11342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6728 chrU 251534 251609 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3589 chr3L 4516302 4516366 + 20 NA intron (FBgn0014073, intron 2 of 5) protein_coding-intron (FBgn0014073, intron 2 of 5) -7901 FBgn0261526 FBgn0261526 FBtr0301520 NT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_724 chr2L 11324239 11324328 + 20 NA Intergenic Intergenic 16530 FBgn0263874 FBgn0263874 FBtr0329848 CR43721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4450 chr3L 21898147 21898201 + 20 NA intron (FBgn0262737, intron 2 of 10) protein_coding-intron (FBgn0262737, intron 1 of 8) -18035 FBgn0264470 FBgn0264470 FBtr0332737 CR43878 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7263 chrX 20150304 20150358 + 20 NA Intergenic Intergenic -9805 FBgn0027107 FBgn0027107 FBtr0077339 inx6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4348 chr3L 18155691 18155745 + 20 NA promoter-TSS (FBgn0036781) protein_coding-promoter-TSS (FBgn0036781) -96 FBgn0036781 FBgn0036781 FBtr0075134 CG13699 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6565 chr3RHet 1111628 1111682 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4540 chr3L 24367866 24367920 + 20 NA intron (FBgn0259697, intron 3 of 5) protein_coding-intron (FBgn0259697, intron 3 of 5) 49926 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1063 chr2L 15283783 15283851 + 20 NA Intergenic Intergenic -1195 FBgn0028853 FBgn0028853 FBtr0080729 CG15263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6076 chr3R 23141834 23141888 + 20 NA exon (FBgn0039510, exon 10 of 32) protein_coding-exon (FBgn0039510, exon 10 of 32) 6186 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_406 chr2L 5941548 5941617 + 20 NA Intergenic Intergenic 1681 FBgn0261055 FBgn0261055 FBtr0301935 Sfp26Ad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2249 chr2R 6219088 6219161 + 20 NA intron (FBgn0261698, intron 16 of 27) protein_coding-intron (FBgn0261698, intron 17 of 28) -11119 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_266 chr2L 4139001 4139120 + 20 NA Intergenic Intergenic -10219 FBgn0031585 FBgn0031585 FBtr0077468 CG2955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2820 chr2R 15600184 15600279 + 20 NA promoter-TSS (FBgn0043533) protein_coding-promoter-TSS (FBgn0043533) 381 FBgn0034471 FBgn0034471 FBtr0086327 Obp56e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5987 chr3R 22144912 22144966 + 20 NA intron (FBgn0053970, intron 1 of 8) protein_coding-intron (FBgn0053970, intron 1 of 8) 6058 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3601 chr3L 5006834 5006911 + 20 NA intron (FBgn0005775, intron 3 of 7) protein_coding-intron (FBgn0005775, intron 3 of 7) 5261 FBgn0035585 FBgn0035585 FBtr0073372 CG12027 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5822 chr3R 18114232 18114286 + 20 NA intron (FBgn0051163, intron 12 of 18) protein_coding-intron (FBgn0051163, intron 12 of 18) -4389 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4568 chr3LHet 1224868 1224972 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4585 chr3LHet 2450718 2450806 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2741 chr2R 14125732 14125794 + 20 NA Intergenic Intergenic 5495 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2731 chr2R 13957351 13957434 + 20 NA intron (FBgn0085415, intron 1 of 4) protein_coding-intron (FBgn0085415, intron 1 of 4) 7183 FBgn0085415 FBgn0085415 FBtr0112627 CG34386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4866 chr3R 4318804 4318858 + 20 NA Intergenic Intergenic -15516 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3840 chr3L 9961499 9961563 + 20 NA promoter-TSS (FBgn0026404) protein_coding-promoter-TSS (FBgn0026404) -48 FBgn0026404 FBgn0026404 FBtr0076347 Nc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2855 chr2R 16064805 16064909 + 20 NA Intergenic Intergenic 31219 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5576 chr3R 14669273 14669363 + 20 NA intron (FBgn0038653, intron 1 of 3) protein_coding-intron (FBgn0038653, intron 1 of 2) 5628 FBgn0038653 FBgn0038653 FBtr0332809 CG18208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6631 chr4 797199 797290 + 20 NA TTS (FBgn0005666) protein_coding-TTS (FBgn0005666) 11018 FBgn0039923 FBgn0039923 FBtr0089254 MED26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5946 chr3R 21760229 21760313 + 20 NA intron (FBgn0039396, intron 2 of 6) protein_coding-intron (FBgn0039396, intron 2 of 6) 3148 FBgn0054024 FBgn0054024 FBtr0308933 CR34024 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2313 chr2R 7359712 7359766 + 20 NA Intergenic Intergenic -3471 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5443 chr3R 13127863 13127934 + 20 NA Intergenic Intergenic 14388 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3487 chr3L 1815831 1815921 + 20 NA intron (FBgn0027790, intron 2 of 3) protein_coding-intron (FBgn0027790, intron 2 of 4) 5288 FBgn0027790 FBgn0027790 FBtr0072785 GV1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4798 chr3R 3199781 3199835 + 20 NA Intergenic Intergenic -4781 FBgn0015770 FBgn0015770 FBtr0081585 MstProx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4409 chr3L 20245663 20245717 + 20 NA intron (FBgn0036960, intron 1 of 2) protein_coding-intron (FBgn0036960, intron 1 of 2) 4508 FBgn0036960 FBgn0036960 FBtr0332772 CG13814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_151 chr2L 1872617 1872671 + 20 NA intron (FBgn0051663, intron 3 of 10) protein_coding-intron (FBgn0051663, intron 3 of 11) 2777 FBgn0031372 FBgn0031372 FBtr0077891 CG7295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5346 chr3R 12006327 12006416 + 20 NA promoter-TSS (FBgn0038405) protein_coding-promoter-TSS (FBgn0038405) -373 FBgn0038405 FBgn0038405 FBtr0100110 CG8927 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5710 chr3R 16174986 16175045 + 20 NA Intergenic Intergenic 10026 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1916 chr2LHet 287770 287824 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1855 chr2L 22704675 22704729 + 20 NA Intergenic Intergenic -13694 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1861 chr2L 22709313 22709397 + 20 NA Intergenic Intergenic -18347 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6599 chr4 170075 170150 + 20 NA Intergenic Intergenic -1278 FBgn0052006 FBgn0052006 FBtr0089170 CG32006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1632 chr2L 21582028 21582082 + 20 NA intron (FBgn0016919, intron 4 of 6) protein_coding-intron (FBgn0016919, intron 4 of 7) -4379 FBgn0260718 FBgn0260718 FBtr0331679 CR42545 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2202 chr2R 5418063 5418139 + 20 NA intron (FBgn0259246, intron 12 of 20) protein_coding-intron (FBgn0259246, intron 13 of 21) 17539 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5225 chr3R 10088809 10088891 + 20 NA promoter-TSS (FBgn0038218) protein_coding-promoter-TSS (FBgn0038218) -710 FBgn0038218 FBgn0038218 FBtr0082951 CG14841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5673 chr3R 15866523 15866577 + 20 NA intron (FBgn0040571, intron 2 of 2) protein_coding-intron (FBgn0040571, intron 2 of 2) -1929 FBgn0064119 FBgn0064119 FBtr0300808 CG33934 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1597 chr2L 21062510 21062569 + 20 NA exon (FBgn0032910, exon 2 of 8) protein_coding-exon (FBgn0032910, exon 2 of 8) 7742 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3844 chr3L 10008928 10008982 + 20 NA intron (FBgn0040823, intron 2 of 6) protein_coding-intron (FBgn0040823, intron 2 of 5) 41204 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6743 chrU 476356 476410 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1622 chr2L 21374994 21375066 + 20 NA exon (FBgn0032945, exon 2 of 3) protein_coding-exon (FBgn0032945, exon 2 of 3) 3803 FBgn0032945 FBgn0032945 FBtr0081517 CG8665 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2588 chr2R 11540155 11540223 + 20 NA Intergenic Intergenic -4438 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1963 chr2R 851958 852054 + 20 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 14834 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6528 chr3R 27751702 27751818 + 20 NA intron (FBgn0011224, intron 3 of 13) protein_coding-intron (FBgn0011224, intron 4 of 13) 55131 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3155 chr2RHet 146423 146521 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5138 chr3R 8680532 8680620 + 20 NA TTS (FBgn0038088) protein_coding-TTS (FBgn0038088) 4363 FBgn0038088 FBgn0038088 FBtr0082686 CG10126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2510 chr2R 10232088 10232196 + 20 NA intron (FBgn0085408, intron 1 of 3) protein_coding-intron (FBgn0085408, intron 7 of 9) -7602 FBgn0033924 FBgn0033924 FBtr0087546 CG8613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3649 chr3L 6129624 6129678 + 20 NA exon (FBgn0020639, exon 2 of 2) protein_coding-exon (FBgn0020639, exon 2 of 2) 240 FBgn0020639 FBgn0020639 FBtr0077057 Lcp65Af protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6482 chr3R 27177245 27177299 + 20 NA intron (FBgn0085376, intron 3 of 7) protein_coding-intron (FBgn0085376, intron 3 of 16) -20877 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5363 chr3R 12233666 12233811 + 20 NA Intergenic Intergenic -4326 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1836 chr2L 22619413 22619467 + 20 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 25087 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_355 chr2L 5340017 5340106 + 20 NA exon (FBgn0031703, exon 2 of 3) protein_coding-exon (FBgn0031703, exon 2 of 3) -2260 FBgn0016920 FBgn0016920 FBtr0079074 nompC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3958 chr3L 12220037 12220091 + 20 NA intron (FBgn0260941, intron 2 of 9) protein_coding-intron (FBgn0260941, intron 3 of 9) -12514 FBgn0260941 FBgn0260941 FBtr0301053 app protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3769 chr3L 8324513 8324608 + 20 NA Intergenic Intergenic 2877 FBgn0085491 FBgn0085491 FBtr0112768 CG34462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4202 chr3L 16245478 16245565 + 20 NA promoter-TSS (FBgn0036583) protein_coding-promoter-TSS (FBgn0036583) -66 FBgn0036583 FBgn0036583 FBtr0075482 CG13055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2509 chr2R 10220320 10220414 + 20 NA exon (FBgn0085408, exon 1 of 4) protein_coding-exon (FBgn0085408, exon 1 of 4) 467 FBgn0085408 FBgn0085408 FBtr0112616 Shroom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5644 chr3R 15543024 15543078 + 20 NA Intergenic Intergenic -1402 FBgn0085315 FBgn0085315 FBtr0112482 CG34286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_36 chr2L 761731 761808 + 20 NA exon (FBgn0031275, exon 10 of 10) protein_coding-exon (FBgn0031275, exon 10 of 10) 11160 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3895 chr3L 10749545 10749610 + 20 NA Intergenic Intergenic -15515 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3258 chr2RHet 1851266 1851320 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4755 chr3R 2753026 2753101 + 20 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) 5499 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5849 chr3R 18849841 18849895 + 20 NA intron (FBgn0039039, intron 1 of 2) protein_coding-intron (FBgn0039039, intron 1 of 2) 2567 FBgn0039039 FBgn0039039 FBtr0084364 lmd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7044 chrX 4305597 4305661 + 20 NA intron (FBgn0052773, intron 3 of 4) protein_coding-intron (FBgn0052773, intron 3 of 4) -1260 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1955 chr2R 835023 835077 + 20 NA Intergenic Intergenic -2122 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1994 chr2R 1745613 1745667 + 20 NA intron (FBgn0085414, intron 8 of 9) protein_coding-intron (FBgn0085414, intron 8 of 9) -35789 FBgn0263109 FBgn0263109 FBtr0307307 CG43366 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5028 chr3R 6965021 6965075 + 20 NA exon (FBgn0037862, exon 1 of 1) protein_coding-exon (FBgn0037862, exon 1 of 1) 2149 FBgn0037862 FBgn0037862 FBtr0082336 CG4706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4577 chr3LHet 1697496 1697550 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2028 chr2R 2664139 2664199 + 20 NA exon (FBgn0085421, exon 1 of 17) protein_coding-exon (FBgn0085421, exon 1 of 17) 4827 FBgn0000473 FBgn0000473 FBtr0086133 Cyp6a2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3965 chr3L 12316825 12316897 + 20 NA Intergenic Intergenic -5471 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4139 chr3L 15195311 15195390 + 20 NA Intergenic Intergenic -5594 FBgn0036490 FBgn0036490 FBtr0075644 CG6888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5509 chr3R 13873663 13873717 + 20 NA exon (FBgn0010389, exon 2 of 2) protein_coding-exon (FBgn0010389, exon 2 of 2) 1393 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5743 chr3R 16634875 16634929 + 20 NA Intergenic Intergenic 7021 FBgn0038827 FBgn0038827 FBtr0083995 Fancd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_196 chr2L 2822742 2822804 + 20 NA TTS (FBgn0031465) protein_coding-TTS (FBgn0031465) 2733 FBgn0031465 FBgn0031465 FBtr0077723 CG3123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5549 chr3R 14333585 14333639 + 20 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 37696 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_831 chr2L 12844299 12844378 + 20 NA Intergenic Intergenic -21551 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4658 chr3R 1353733 1353787 + 20 NA exon (FBgn0010051, exon 3 of 19) protein_coding-exon (FBgn0010051, exon 3 of 19) 459 FBgn0010051 FBgn0010051 FBtr0078687 Itp-r83A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_888 chr2L 13761421 13761512 + 20 NA Intergenic Intergenic -9621 FBgn0028541 FBgn0028541 FBtr0080532 TM9SF4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5016 chr3R 6790847 6790901 + 20 NA Intergenic Intergenic 14868 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1571 chr2L 20706137 20706191 + 20 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 8252 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6282 chr3R 25094083 25094137 + 20 NA Intergenic Intergenic -12608 FBgn0003525 FBgn0003525 FBtr0085397 stg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5499 chr3R 13731559 13731628 + 20 NA promoter-TSS (FBgn0038558) protein_coding-promoter-TSS (FBgn0038558) -593 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3859 chr3L 10463224 10463392 + 20 NA Intergenic Intergenic 3873 FBgn0045770 FBgn0045770 FBtr0334098 S-Lap3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4517 chr3L 23957198 23957261 + 20 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 22281 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5058 chr3R 7430575 7430647 + 20 NA promoter-TSS (FBgn0051363) protein_coding-promoter-TSS (FBgn0051363) -12645 FBgn0051363 FBgn0051363 FBtr0082457 Jupiter protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4011 chr3L 12989439 12989493 + 20 NA exon (FBgn0036329, exon 1 of 1) protein_coding-exon (FBgn0036329, exon 1 of 1) 1231 FBgn0036329 FBgn0036329 FBtr0075872 CG11262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1147 chr2L 16088690 16088744 + 20 NA Intergenic Intergenic -6292 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3856 chr3L 10318504 10318558 + 20 NA Intergenic Intergenic 5585 FBgn0262381 FBgn0262381 FBtr0304227 mir-276b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5444 chr3R 13153000 13153054 + 20 NA exon (FBgn0038498, exon 5 of 7) protein_coding-exon (FBgn0038498, exon 5 of 7) 38812 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_122 chr2L 1510317 1510371 + 20 NA Intergenic Intergenic 7134 FBgn0031345 FBgn0031345 FBtr0077919 CG18132 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2672 chr2R 12791093 12791158 + 20 NA Intergenic Intergenic 5037 FBgn0004784 FBgn0004784 FBtr0087047 inaC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_272 chr2L 4178444 4178561 + 20 NA Intergenic Intergenic 9287 FBgn0051961 FBgn0051961 FBtr0077485 CG31961 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1259 chr2L 17260777 17260870 + 20 NA promoter-TSS (FBgn0032629) protein_coding-promoter-TSS (FBgn0032629) -91 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1258 chr2L 17251917 17251980 + 20 NA intron (FBgn0032629, intron 1 of 6) protein_coding-intron (FBgn0032629, intron 1 of 5) 8784 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_189 chr2L 2686773 2686827 + 20 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) 9067 FBgn0051690 FBgn0051690 FBtr0301682 CG31690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3439 chr3L 697037 697091 + 20 NA intron (FBgn0035157, intron 1 of 1) protein_coding-intron (FBgn0035157, intron 1 of 1) 2080 FBgn0035157 FBgn0035157 FBtr0072606 CG13894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4401 chr3L 20055588 20055642 + 20 NA intron (FBgn0036934, intron 2 of 2) protein_coding-intron (FBgn0036934, intron 2 of 2) 26492 FBgn0036934 FBgn0036934 FBtr0074871 sNPF-R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4997 chr3R 6493154 6493208 + 20 NA Intergenic Intergenic 9711 FBgn0037818 FBgn0037818 FBtr0082323 CG6465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5304 chr3R 11587384 11587452 + 20 NA Intergenic Intergenic -1419 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6448 chr3R 26857002 26857105 + 20 NA Intergenic Intergenic -4015 FBgn0053773 FBgn0053773 FBtr0091774 CG33773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3940 chr3L 11856515 11856641 + 20 NA promoter-TSS (FBgn0085449) protein_coding-promoter-TSS (FBgn0085449) -31 FBgn0085449 FBgn0085449 FBtr0330129 CG34420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4757 chr3R 2762409 2762463 + 20 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 2 of 6) -3874 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1409 chr2L 19077633 19077687 + 20 NA exon (FBgn0032754, exon 1 of 1) protein_coding-exon (FBgn0032754, exon 1 of 1) 1368 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4553 chr3LHet 718238 718313 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3536 chr3L 3010084 3010138 + 20 NA exon (FBgn0035385, exon 2 of 2) protein_coding-exon (FBgn0035385, exon 2 of 2) 5958 FBgn0052488 FBgn0052488 FBtr0073008 CG32488 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4497 chr3L 23743864 23743972 + 20 NA Intergenic Intergenic 12858 FBgn0040056 FBgn0040056 FBtr0333914 CG17698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3845 chr3L 10012134 10012188 + 20 NA intron (FBgn0040823, intron 2 of 6) protein_coding-intron (FBgn0040823, intron 2 of 5) 44410 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3233 chr2RHet 1322532 1322649 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_531 chr2L 8602465 8602519 + 20 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -8003 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4924 chr3R 5150887 5150963 + 20 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) 3302 FBgn0037676 FBgn0037676 FBtr0301210 CG8861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4465 chr3L 23047062 23047116 + 20 NA Intergenic Intergenic 41482 FBgn0024733 FBgn0024733 FBtr0299870 RpL10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5302 chr3R 11580929 11581031 + 20 NA Intergenic Intergenic -7857 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4093 chr3L 14333232 14333349 + 20 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) 10844 FBgn0036419 FBgn0036419 FBtr0075744 CG13482 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4689 chr3R 2018986 2019090 + 20 NA exon (FBgn0037408, exon 5 of 5) protein_coding-exon (FBgn0037408, exon 5 of 5) -5497 FBgn0037409 FBgn0037409 FBtr0078591 Osi24 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1079 chr2L 15427856 15427915 + 20 NA Intergenic Intergenic -2300 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4774 chr3R 2962834 2962891 + 20 NA exon (FBgn0037475, exon 2 of 5) protein_coding-exon (FBgn0037475, exon 2 of 5) 932 FBgn0037475 FBgn0037475 FBtr0081567 Fer1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_570 chr2L 8783957 8784037 + 20 NA Intergenic Intergenic -1503 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2837 chr2R 15793025 15793121 + 20 NA Intergenic Intergenic -24648 FBgn0034477 FBgn0034477 FBtr0086341 CG13872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6157 chr3R 23883914 23883995 + 20 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 31620 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1332 chr2L 17980568 17980645 + 20 NA exon (FBgn0023096, exon 6 of 25) protein_coding-exon (FBgn0023096, exon 6 of 25) 1866 FBgn0023096 FBgn0023096 FBtr0273418 btv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2716 chr2R 13714898 13714952 + 20 NA exon (FBgn0259211, exon 5 of 15) protein_coding-exon (FBgn0259211, exon 5 of 15) 3855 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_251 chr2L 3814223 3814277 + 20 NA promoter-TSS (FBgn0031573) protein_coding-promoter-TSS (FBgn0031573) -843 FBgn0031573 FBgn0031573 FBtr0077515 CG3407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3503 chr3L 2031339 2031393 + 20 NA Intergenic Intergenic 4375 FBgn0085288 FBgn0085288 FBtr0300030 CG34259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_621 chr2L 9057718 9057805 + 20 NA intron (FBgn0051708, intron 6 of 9) protein_coding-intron (FBgn0051708, intron 6 of 9) 13401 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1802 chr2L 22477149 22477223 + 20 NA exon (FBgn0040011, exon 3 of 4) protein_coding-exon (FBgn0040011, exon 3 of 4) 4704 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1996 chr2R 1830760 1830814 + 20 NA Intergenic Intergenic -14573 FBgn0033047 FBgn0033047 FBtr0085966 CG7882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2320 chr2R 7412264 7412318 + 20 NA exon (FBgn0000577, exon 3 of 3) protein_coding-exon (FBgn0000577, exon 3 of 3) 3097 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5309 chr3R 11601821 11601887 + 20 NA exon (FBgn0038358, exon 3 of 5) protein_coding-exon (FBgn0038358, exon 3 of 5) 1757 FBgn0038358 FBgn0038358 FBtr0083170 CG4525 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3899 chr3L 10838008 10838076 + 20 NA Intergenic Intergenic -13462 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3989 chr3L 12627743 12627797 + 20 NA intron (FBgn0052111, intron 2 of 6) protein_coding-intron (FBgn0052111, intron 2 of 6) 6734 FBgn0052111 FBgn0052111 FBtr0309060 CG32111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1829 chr2L 22595717 22595849 + 20 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 48744 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_571 chr2L 8787043 8787148 + 20 NA Intergenic Intergenic -4601 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2845 chr2R 15894797 15894859 + 20 NA Intergenic Intergenic -2336 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4751 chr3R 2721565 2721619 + 20 NA TTS (FBgn0260642) protein_coding-TTS (FBgn0260642) 8812 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6188 chr3R 24130984 24131078 + 20 NA promoter-TSS (FBgn0039577) protein_coding-promoter-TSS (FBgn0039577) -704 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5403 chr3R 12602004 12602084 + 20 NA Intergenic Intergenic -9966 FBgn0085056 FBgn0085056 FBtr0113492 tre-1 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1968 chr2R 867947 868001 + 20 NA intron (FBgn0040849, intron 2 of 4) protein_coding-intron (FBgn0040849, intron 2 of 4) 30802 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_136 chr2L 1607565 1607619 + 20 NA exon (FBgn0261509, exon 11 of 11) protein_coding-exon (FBgn0261509, exon 11 of 11) 3533 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_594 chr2L 8863323 8863386 + 20 NA promoter-TSS (FBgn0052987) protein_coding-promoter-TSS (FBgn0052987) -457 FBgn0052987 FBgn0052987 FBtr0079735 CG32987 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1908 chr2LHet 206914 206968 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3094 chr2R 20388881 20388980 + 20 NA exon (FBgn0017556, exon 3 of 3) protein_coding-exon (FBgn0017556, exon 3 of 3) 827 FBgn0017556 FBgn0017556 FBtr0072350 Pros28.1B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4799 chr3R 3208950 3209004 + 20 NA Intergenic Intergenic -8227 FBgn0261502 FBgn0261502 FBtr0302394 CG42650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2994 chr2R 18598785 18598839 + 20 NA exon (FBgn0050275, exon 10 of 14) protein_coding-exon (FBgn0050275, exon 10 of 14) -1394 FBgn0050268 FBgn0050268 FBtr0273311 CG30268 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4769 chr3R 2864553 2864632 + 20 NA Intergenic Intergenic -13465 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_605 chr2L 8897518 8897572 + 20 NA Intergenic Intergenic -1259 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2553 chr2R 10898869 10898937 + 20 NA promoter-TSS (FBgn0029082) protein_coding-promoter-TSS (FBgn0029082) 0 FBgn0029082 FBgn0029082 FBtr0087414 hbs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1028 chr2L 14942845 14942932 + 20 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 18153 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3268 chr2RHet 1876300 1876373 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4487 chr3L 23606438 23606609 + 20 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 57498 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4569 chr3LHet 1268551 1268605 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5796 chr3R 17503043 17503097 + 20 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) -5598 FBgn0259113 FBgn0259113 FBtr0084115 DNApol-alpha180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_130 chr2L 1566319 1566449 + 20 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 11254 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5191 chr3R 9459313 9459367 + 20 NA exon (FBgn0038163, exon 7 of 9) protein_coding-exon (FBgn0038163, exon 7 of 9) 1676 FBgn0038163 FBgn0038163 FBtr0309093 CG10841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_399 chr2L 5845788 5845874 + 20 NA exon (FBgn0085410, exon 2 of 10) protein_coding-exon (FBgn0085410, exon 2 of 10) 21037 FBgn0085410 FBgn0085410 FBtr0330222 TrissinR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3594 chr3L 4683121 4683199 + 20 NA intron (FBgn0262870, intron 1 of 20) protein_coding-intron (FBgn0262870, intron 1 of 20) 4157 FBgn0262870 FBgn0262870 FBtr0306207 axo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2506 chr2R 10198210 10198264 + 20 NA intron (FBgn0085408, intron 1 of 9) protein_coding-intron (FBgn0085408, intron 1 of 9) -8379 FBgn0033921 FBgn0033921 FBtr0087562 tej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_67 chr2L 1033082 1033136 + 20 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) 1473 FBgn0031294 FBgn0031294 FBtr0332270 IA-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1238 chr2L 17091577 17091644 + 20 NA Intergenic Intergenic 3969 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4580 chr3LHet 2129103 2129157 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6587 chr3RHet 2099883 2099953 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3757 chr3L 8028151 8028205 + 20 NA intron (FBgn0011817, intron 3 of 8) protein_coding-intron (FBgn0011817, intron 3 of 9) -6460 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4899 chr3R 4793038 4793093 + 20 NA Intergenic Intergenic -4382 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3596 chr3L 4760711 4760771 + 20 NA intron (FBgn0035574, intron 5 of 10) protein_coding-intron (FBgn0035574, intron 5 of 10) 2858 FBgn0035572 FBgn0035572 FBtr0073347 CG13711 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2917 chr2R 17234922 17234991 + 20 NA TTS (FBgn0034624) protein_coding-TTS (FBgn0034624) 400 FBgn0034623 FBgn0034623 FBtr0071612 CG9822 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_308 chr2L 4475650 4475718 + 20 NA intron (FBgn0011603, intron 1 of 9) protein_coding-intron (FBgn0011603, intron 1 of 9) 1340 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2786 chr2R 14954699 14954797 + 20 NA promoter-TSS (FBgn0004168) protein_coding-promoter-TSS (FBgn0004168) 88 FBgn0004168 FBgn0004168 FBtr0086577 5-HT1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2774 chr2R 14760561 14760651 + 20 NA Intergenic Intergenic -4934 FBgn0262569 FBgn0262569 FBtr0304896 CG43109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1317 chr2L 17838391 17838465 + 20 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 1 of 13) -25756 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6290 chr3R 25175560 25175686 + 20 NA Intergenic Intergenic -30287 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5998 chr3R 22217335 22217404 + 20 NA Intergenic Intergenic 12009 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_169 chr2L 2277770 2277824 + 20 NA TTS (FBgn0264084) ncRNA-TTS (FBgn0264084) 1917 FBgn0264084 FBgn0264084 FBtr0330688 CR43753 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_606 chr2L 8903478 8903532 + 20 NA intron (FBgn0085427, intron 1 of 11) protein_coding-intron (FBgn0085427, intron 1 of 10) 4701 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5335 chr3R 11938007 11938061 + 20 NA Intergenic Intergenic 13096 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1398 chr2L 18861122 18861176 + 20 NA exon (FBgn0003896, exon 8 of 9) protein_coding-exon (FBgn0003896, exon 8 of 9) -1903 FBgn0032720 FBgn0032720 FBtr0089318 mRpL13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1348 chr2L 18101716 18101770 + 20 NA Intergenic Intergenic 5175 FBgn0032664 FBgn0032664 FBtr0081033 CG5755 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4383 chr3L 19104844 19104898 + 20 NA intron (FBgn0036851, intron 3 of 4) protein_coding-intron (FBgn0036851, intron 3 of 4) -11408 FBgn0036850 FBgn0036850 FBtr0075032 Gem2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6520 chr3R 27647626 27647703 + 20 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -3902 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2146 chr2R 4645620 4645694 + 20 NA exon (FBgn0027585, exon 6 of 8) protein_coding-exon (FBgn0027585, exon 6 of 8) 20782 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1155 chr2L 16168617 16168671 + 20 NA intron (FBgn0001991, intron 1 of 32) protein_coding-intron (FBgn0001991, intron 1 of 31) 2813 FBgn0001991 FBgn0001991 FBtr0332020 Ca-alpha1D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5256 chr3R 10860282 10860336 + 20 NA Intergenic Intergenic -2779 FBgn0038281 FBgn0038281 FBtr0083024 RpL10Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_279 chr2L 4283751 4283809 + 20 NA promoter-TSS (FBgn0010473) protein_coding-promoter-TSS (FBgn0010473) 632 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6469 chr3R 26989086 26989140 + 20 NA intron (FBgn0086704, intron 6 of 8) protein_coding-intron (FBgn0013973, intron 16 of 16) 5712 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4623 chr3R 812505 812590 + 20 NA promoter-TSS (FBgn0263343) ncRNA-promoter-TSS (FBgn0263343) -705 FBgn0263343 FBgn0263343 FBtr0308777 CR43424 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4797 chr3R 3183744 3183849 + 20 NA Intergenic Intergenic 4049 FBgn0037500 FBgn0037500 FBtr0081590 CG17944 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4279 chr3L 17277095 17277158 + 20 NA Intergenic Intergenic 19610 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3711 chr3L 7023998 7024067 + 20 NA intron (FBgn0260660, intron 2 of 5) protein_coding-intron (FBgn0260660, intron 4 of 21) -4138 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3665 chr3L 6433413 6433467 + 20 NA intron (FBgn0261801, intron 1 of 6) protein_coding-intron (FBgn0261801, intron 1 of 6) 39748 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_415 chr2L 6252373 6252448 + 20 NA promoter-TSS (FBgn0053531) protein_coding-promoter-TSS (FBgn0053531) -713 FBgn0053531 FBgn0053531 FBtr0301305 Ddr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5997 chr3R 22216125 22216199 + 20 NA Intergenic Intergenic 13216 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5596 chr3R 14841122 14841176 + 20 NA intron (FBgn0026239, intron 4 of 4) protein_coding-intron (FBgn0026239, intron 4 of 4) 8595 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4499 chr3L 23759061 23759115 + 20 NA Intergenic Intergenic -18243 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6826 chrU 3341686 3341779 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1430 chr2L 19295648 19295703 + 20 NA Intergenic Intergenic 4176 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3591 chr3L 4613837 4613907 + 20 NA promoter-TSS (FBgn0262733) protein_coding-promoter-TSS (FBgn0262733) -7393 FBgn0052246 FBgn0052246 FBtr0302941 CG32246 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1043 chr2L 15084217 15084271 + 20 NA intron (FBgn0028879, intron 2 of 16) protein_coding-intron (FBgn0028879, intron 1 of 16) 9468 FBgn0028879 FBgn0028879 FBtr0332180 CG15270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1399 chr2L 18881365 18881461 + 20 NA promoter-TSS (FBgn0003896) protein_coding-promoter-TSS (FBgn0003896) -157 FBgn0003896 FBgn0003896 FBtr0081111 tup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1616 chr2L 21334054 21334120 + 20 NA intron (FBgn0023091, intron 1 of 2) protein_coding-intron (FBgn0023091, intron 1 of 2) 2331 FBgn0023091 FBgn0023091 FBtr0081514 dimm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_516 chr2L 8499812 8499882 + 20 NA intron (FBgn0032048, intron 2 of 3) protein_coding-intron (FBgn0032048, intron 2 of 4) -3540 FBgn0032049 FBgn0032049 FBtr0079701 Bace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6007 chr3R 22323702 22323756 + 20 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 31934 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1376 chr2L 18474283 18474413 + 20 NA exon (FBgn0032681, exon 7 of 9) protein_coding-exon (FBgn0032681, exon 7 of 9) 2005 FBgn0262456 FBgn0262456 FBtr0304492 mir-125 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6876 chrUextra 272024 272149 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5409 chr3R 12645411 12645527 + 20 NA intron (FBgn0000014, intron 4 of 5) protein_coding-intron (FBgn0000014, intron 5 of 6) 10298 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2953 chr2R 17856566 17856630 + 20 NA exon (FBgn0085398, exon 6 of 10) protein_coding-exon (FBgn0085398, exon 6 of 10) 2187 FBgn0054029 FBgn0054029 FBtr0100084 CG34029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_156 chr2L 1964439 1964497 + 20 NA promoter-TSS (FBgn0051942) tRNA-promoter-TSS (FBgn0051942) -958 FBgn0051942 FBgn0051942 FBtr0077812 tRNA:CR31942 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3949 chr3L 12057985 12058039 + 20 NA promoter-TSS (FBgn0041096) protein_coding-promoter-TSS (FBgn0041096) -53 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding Nup98-S2-pascual-garcia2017_R1_peak_458 chr2L 7104910 7105002 + 20 NA intron (FBgn0085407, intron 3 of 4) protein_coding-intron (FBgn0085407, intron 4 of 5) -20322 FBgn0031888 FBgn0031888 FBtr0079423 Pvf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5106 chr3R 8188448 8188502 + 20 NA promoter-TSS (FBgn0065094) ncRNA-promoter-TSS (FBgn0065094) -163 FBgn0065094 FBgn0065094 FBtr0091921 snmRNA:419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4972 chr3R 6296308 6296409 + 20 NA Intergenic Intergenic 35847 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2460 chr2R 9370032 9370089 + 20 NA TTS (FBgn0033842) protein_coding-TTS (FBgn0033842) 663 FBgn0000119 FBgn0000119 FBtr0087702 arr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3088 chr2R 20231172 20231236 + 20 NA promoter-TSS (FBgn0004101) protein_coding-promoter-TSS (FBgn0004101) 815 FBgn0004101 FBgn0004101 FBtr0072271 bs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4536 chr3L 24180260 24180351 + 20 NA intron (FBgn0011288, intron 4 of 7) protein_coding-intron (FBgn0011288, intron 4 of 7) 112976 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5001 chr3R 6541018 6541117 + 20 NA exon (FBgn0037827, exon 1 of 1) protein_coding-exon (FBgn0037827, exon 1 of 1) 547 FBgn0037827 FBgn0037827 FBtr0082269 CG4073 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_95 chr2L 1328398 1328468 + 20 NA promoter-TSS (FBgn0011294) protein_coding-promoter-TSS (FBgn0011294) -728 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_728 chr2L 11360863 11360917 + 20 NA intron (FBgn0000287, intron 1 of 6) protein_coding-intron (FBgn0000287, intron 1 of 6) 2017 FBgn0000287 FBgn0000287 FBtr0080236 salr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5884 chr3R 19748075 19748172 + 20 NA promoter-TSS (FBgn0051141) protein_coding-promoter-TSS (FBgn0051141) 572 FBgn0016754 FBgn0016754 FBtr0330380 sba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2053 chr2R 3212087 3212141 + 20 NA exon (FBgn0033159, exon 18 of 24) protein_coding-exon (FBgn0033159, exon 18 of 24) 13201 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1925 chr2R 186695 186810 + 20 NA Intergenic Intergenic -56308 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6618 chr4 611914 612039 + 20 NA Intergenic Intergenic 8205 FBgn0039911 FBgn0039911 FBtr0089080 CG1909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_208 chr2L 3092177 3092246 + 20 NA intron (FBgn0015600, intron 4 of 8) protein_coding-intron (FBgn0015600, intron 6 of 10) 15931 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3629 chr3L 5953703 5953757 + 20 NA Intergenic Intergenic 15377 FBgn0035656 FBgn0035656 FBtr0332041 CG10479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7186 chrX 13338846 13338955 + 20 NA Intergenic Intergenic -1039 FBgn0052635 FBgn0052635 FBtr0073780 Neto protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2577 chr2R 11367184 11367275 + 20 NA intron (FBgn0034021, intron 1 of 4) protein_coding-intron (FBgn0034021, intron 1 of 4) 3109 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2807 chr2R 15451069 15451123 + 20 NA intron (FBgn0003435, intron 5 of 10) protein_coding-intron (FBgn0003435, intron 5 of 9) 1353 FBgn0053535 FBgn0053535 FBtr0100843 tRNA:CR33535 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5667 chr3R 15773196 15773267 + 20 NA promoter-TSS (FBgn0038756) protein_coding-promoter-TSS (FBgn0038756) -961 FBgn0038756 FBgn0038756 FBtr0083823 CG4783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3218 chr2RHet 1090281 1090344 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5453 chr3R 13275857 13275930 + 20 NA promoter-TSS (FBgn0000564) protein_coding-promoter-TSS (FBgn0000564) -643 FBgn0000564 FBgn0000564 FBtr0083444 Eh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_745 chr2L 11589495 11589569 + 20 NA Intergenic Intergenic 2146 FBgn0046212 FBgn0046212 FBtr0100526 CG15841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1631 chr2L 21556923 21557015 + 20 NA Intergenic Intergenic 13980 FBgn0051614 FBgn0051614 FBtr0085895 His-Psi:CR31614 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4496 chr3L 23742461 23742515 + 20 NA TTS (FBgn0040056) protein_coding-TTS (FBgn0040056) 11428 FBgn0040056 FBgn0040056 FBtr0333914 CG17698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6433 chr3R 26750633 26750687 + 20 NA intron (FBgn0020912, intron 4 of 4) protein_coding-intron (FBgn0020912, intron 4 of 4) 11569 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_86 chr2L 1245475 1245529 + 20 NA Intergenic Intergenic 5464 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5125 chr3R 8605015 8605157 + 20 NA Intergenic Intergenic -1212 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1886 chr2L 22924013 22924099 + 20 NA Intergenic Intergenic -5496 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1833 chr2L 22613062 22613116 + 20 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 31438 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4018 chr3L 13080731 13080785 + 20 NA promoter-TSS (FBgn0036345) protein_coding-promoter-TSS (FBgn0036345) -369 FBgn0036345 FBgn0036345 FBtr0075892 CG17300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4713 chr3R 2334135 2334189 + 20 NA Intergenic Intergenic -12329 FBgn0011919 FBgn0011919 FBtr0081706 tRNA:M2:83F tRNA Nup98-S2-pascual-garcia2017_R1_peak_6047 chr3R 22613254 22613337 + 20 NA Intergenic Intergenic 3235 FBgn0261861 FBgn0261861 FBtr0310470 CG42790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2431 chr2R 9009773 9009827 + 20 NA exon (FBgn0033792, exon 2 of 11) protein_coding-exon (FBgn0033792, exon 2 of 11) 5990 FBgn0033792 FBgn0033792 FBtr0087722 CG13325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4513 chr3L 23899328 23899447 + 20 NA intron (FBgn0058470, intron 6 of 12) protein_coding-intron (FBgn0058470, intron 6 of 12) -2832 FBgn0264570 FBgn0264570 FBtr0333470 CR43942 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_753 chr2L 11768993 11769094 + 20 NA Intergenic Intergenic -14541 FBgn0259962 FBgn0259962 FBtr0300306 Sfp33A1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1580 chr2L 20776028 20776082 + 20 NA intron (FBgn0000251, intron 1 of 1) protein_coding-intron (FBgn0000251, intron 1 of 1) 5161 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4168 chr3L 15787166 15787238 + 20 NA Intergenic Intergenic -14220 FBgn0036531 FBgn0036531 FBtr0075502 CG6244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1903 chr2LHet 192268 192322 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4859 chr3R 4223011 4223070 + 20 NA intron (FBgn0263416, intron 9 of 15) protein_coding-intron (FBgn0263416, intron 9 of 15) -9116 FBgn0051462 FBgn0051462 FBtr0081851 CG31462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_148 chr2L 1826733 1826834 + 20 NA promoter-TSS (FBgn0051664) protein_coding-promoter-TSS (FBgn0051664) -405 FBgn0051664 FBgn0051664 FBtr0303377 CG31664 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4286 chr3L 17377263 17377329 + 20 NA exon (FBgn0036717, exon 3 of 3) protein_coding-exon (FBgn0036717, exon 3 of 3) -1468 FBgn0036716 FBgn0036716 FBtr0075238 CG13728 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2017 chr2R 2370120 2370198 + 20 NA Intergenic Intergenic 50941 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2587 chr2R 11539810 11539876 + 20 NA Intergenic Intergenic -4784 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2478 chr2R 9609339 9609393 + 20 NA intron (FBgn0000633, intron 9 of 12) protein_coding-intron (FBgn0000633, intron 9 of 12) -28492 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3463 chr3L 1181027 1181081 + 20 NA Intergenic Intergenic -3778 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_327 chr2L 4759452 4759607 + 20 NA intron (FBgn0031627, intron 1 of 6) protein_coding-intron (FBgn0031627, intron 1 of 6) -3408 FBgn0260428 FBgn0260428 FBtr0300851 CG42523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1075 chr2L 15401549 15401664 + 20 NA Intergenic Intergenic 23979 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4478 chr3L 23471277 23471403 + 20 NA Intergenic Intergenic -77685 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4993 chr3R 6453909 6454043 + 20 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -22584 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_837 chr2L 12913203 12913271 + 20 NA exon (FBgn0040508, exon 4 of 12) protein_coding-exon (FBgn0040508, exon 4 of 12) 707 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1061 chr2L 15233399 15233453 + 20 NA intron (FBgn0028516, intron 4 of 6) protein_coding-intron (FBgn0028516, intron 6 of 8) 12492 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3910 chr3L 11152031 11152124 + 20 NA exon (FBgn0052082, exon 7 of 12) protein_coding-exon (FBgn0052082, exon 7 of 12) 5824 FBgn0264721 FBgn0264721 FBtr0334097 CR43989 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_680 chr2L 10567539 10567609 + 20 NA exon (FBgn0032268, exon 1 of 1) protein_coding-exon (FBgn0032268, exon 1 of 1) 284 FBgn0032268 FBgn0032268 FBtr0080098 CG6138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6148 chr3R 23829072 23829146 + 20 NA Intergenic Intergenic -12636 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1854 chr2L 22703485 22703597 + 20 NA Intergenic Intergenic -12533 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_662 chr2L 10021114 10021200 + 20 NA Intergenic Intergenic -3694 FBgn0032175 FBgn0032175 FBtr0273335 CG13131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3800 chr3L 8784061 8784118 + 20 NA exon (FBgn0261259, exon 15 of 17) protein_coding-exon (FBgn0261259, exon 15 of 17) -2444 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4552 chr3LHet 635018 635094 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7147 chrX 11710862 11710916 + 20 NA promoter-TSS (FBgn0030336) protein_coding-promoter-TSS (FBgn0030336) -324 FBgn0030336 FBgn0030336 FBtr0073607 CG1578 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_126 chr2L 1544497 1544584 + 20 NA Intergenic Intergenic -10590 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4987 chr3R 6428554 6428616 + 20 NA exon (FBgn0001235, exon 2 of 12) protein_coding-exon (FBgn0001235, exon 2 of 12) 2807 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_28 chr2L 736313 736384 + 20 NA TTS (FBgn0026438) protein_coding-TTS (FBgn0026438) 7936 FBgn0011244 FBgn0011244 FBtr0078000 Hsp60B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5462 chr3R 13343608 13343687 + 20 NA Intergenic Intergenic -12258 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4974 chr3R 6317720 6317784 + 20 NA Intergenic Intergenic 21026 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_895 chr2L 13955294 13955388 + 20 NA exon (FBgn0032536, exon 9 of 9) protein_coding-exon (FBgn0032536, exon 9 of 9) -2198 FBgn0261514 FBgn0261514 FBtr0304720 nimA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6210 chr3R 24298479 24298550 + 20 NA exon (FBgn0039584, exon 7 of 7) protein_coding-exon (FBgn0039584, exon 7 of 7) -11765 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6521 chr3R 27649370 27649424 + 20 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -2169 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6316 chr3R 25383260 25383376 + 20 NA exon (FBgn0000492, exon 1 of 2) protein_coding-exon (FBgn0000492, exon 1 of 2) 1209 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5137 chr3R 8678739 8678812 + 20 NA Intergenic Intergenic -4634 FBgn0038087 FBgn0038087 FBtr0302367 beat-Va protein_coding Nup98-S2-pascual-garcia2017_R1_peak_681 chr2L 10603046 10603100 + 20 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -21411 FBgn0085190 FBgn0085190 FBtr0112352 CG34161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3196 chr2RHet 700086 700140 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3447 chr3L 964250 964347 + 20 NA intron (FBgn0264574, intron 1 of 15) protein_coding-intron (FBgn0264574, intron 1 of 10) 4638 FBgn0264574 FBgn0264574 FBtr0333507 Glut1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6665 chr4 1126824 1126878 + 20 NA exon (FBgn0005561, exon 7 of 13) protein_coding-exon (FBgn0005561, exon 7 of 13) 7838 FBgn0005561 FBgn0005561 FBtr0301563 sv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_671 chr2L 10153082 10153136 + 20 NA exon (FBgn0032187, exon 6 of 11) protein_coding-exon (FBgn0032187, exon 6 of 11) 6250 FBgn0032187 FBgn0032187 FBtr0079944 CG4839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6632 chr4 822532 822701 + 20 NA exon (FBgn0039938, exon 3 of 3) protein_coding-exon (FBgn0039938, exon 3 of 3) 2557 FBgn0039939 FBgn0039939 FBtr0089242 CG11231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_376 chr2L 5556678 5556771 + 20 NA exon (FBgn0004620, exon 7 of 12) protein_coding-exon (FBgn0004620, exon 7 of 12) 1650 FBgn0004620 FBgn0004620 FBtr0079106 GluRIIA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6760 chrU 1187773 1187900 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3253 chr2RHet 1721158 1721212 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2454 chr2R 9286669 9286741 + 20 NA exon (FBgn0033834, exon 1 of 2) protein_coding-exon (FBgn0033834, exon 1 of 2) 168 FBgn0033834 FBgn0033834 FBtr0087717 CG4744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1264 chr2L 17278930 17278984 + 20 NA Intergenic Intergenic -7337 FBgn0032631 FBgn0032631 FBtr0302408 CG15140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2828 chr2R 15654359 15654440 + 20 NA promoter-TSS (FBgn0053353) rRNA-promoter-TSS (FBgn0053353) -616 FBgn0053353 FBgn0053353 FBtr0086345 5SrRNA:CR33353 rRNA Nup98-S2-pascual-garcia2017_R1_peak_6536 chr3R 27834937 27835022 + 20 NA Intergenic Intergenic 22408 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1349 chr2L 18116059 18116124 + 20 NA TTS (FBgn0032665) protein_coding-TTS (FBgn0032665) 1544 FBgn0032665 FBgn0032665 FBtr0081034 CG15152 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2877 chr2R 16422224 16422297 + 20 NA TTS (FBgn0050154) protein_coding-TTS (FBgn0050154) 243 FBgn0034512 FBgn0034512 FBtr0086216 CG18067 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5019 chr3R 6832274 6832341 + 20 NA intron (FBgn0083950, intron 1 of 13) protein_coding-intron (FBgn0083950, intron 1 of 15) 13102 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5487 chr3R 13604591 13604664 + 20 NA exon (FBgn0262562, exon 4 of 17) protein_coding-exon (FBgn0262562, exon 4 of 17) 15669 FBgn0262562 FBgn0262562 FBtr0305013 CG43102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5886 chr3R 19779723 19779777 + 20 NA exon (FBgn0005674, exon 5 of 6) protein_coding-exon (FBgn0005674, exon 5 of 6) 1471 FBgn0005674 FBgn0005674 FBtr0084512 Aats-glupro protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2835 chr2R 15759471 15759571 + 20 NA Intergenic Intergenic 7299 FBgn0043532 FBgn0043532 FBtr0086337 Obp56i protein_coding Nup98-S2-pascual-garcia2017_R1_peak_182 chr2L 2547423 2547477 + 20 NA Intergenic Intergenic 5394 FBgn0031431 FBgn0031431 FBtr0077750 CG3515 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1620 chr2L 21365505 21365615 + 20 NA exon (FBgn0023090, exon 5 of 5) protein_coding-exon (FBgn0023090, exon 5 of 5) 4146 FBgn0041245 FBgn0041245 FBtr0081522 Gr39b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2102 chr2R 3922150 3922234 + 20 NA intron (FBgn0025360, intron 3 of 3) protein_coding-intron (FBgn0025360, intron 3 of 3) 3403 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_252 chr2L 3826554 3826608 + 20 NA exon (FBgn0003430, exon 1 of 1) protein_coding-exon (FBgn0003430, exon 1 of 1) 901 FBgn0003430 FBgn0003430 FBtr0077499 slp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_184 chr2L 2606141 2606195 + 20 NA Intergenic Intergenic -3978 FBgn0031440 FBgn0031440 FBtr0114513 CG15395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4909 chr3R 5119194 5119268 + 20 NA Intergenic Intergenic 26477 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4049 chr3L 13675503 13675557 + 20 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 61593 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_41 chr2L 795148 795202 + 20 NA Intergenic Intergenic -4377 FBgn0000442 FBgn0000442 FBtr0078042 Pkg21D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5852 chr3R 18898884 18898938 + 20 NA intron (FBgn0039054, intron 10 of 10) protein_coding-intron (FBgn0039054, intron 10 of 10) -5930 FBgn0039048 FBgn0039048 FBtr0303508 CG17111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3592 chr3L 4624622 4624706 + 20 NA intron (FBgn0262733, intron 2 of 7) protein_coding-intron (FBgn0262733, intron 2 of 7) 1468 FBgn0262733 FBgn0262733 FBtr0302594 Src64B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4109 chr3L 14557693 14557773 + 20 NA Intergenic Intergenic -2807 FBgn0261816 FBgn0261816 FBtr0303303 CG42758 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3240 chr2RHet 1451130 1451203 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_176 chr2L 2388546 2388641 + 20 NA Intergenic Intergenic 2096 FBgn0264081 FBgn0264081 FBtr0330686 CG43750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4083 chr3L 14155584 14155638 + 20 NA Intergenic Intergenic 16109 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2025 chr2R 2609154 2609231 + 20 NA exon (FBgn0010482, exon 26 of 26) protein_coding-exon (FBgn0010482, exon 26 of 26) -2154 FBgn0033097 FBgn0033097 FBtr0306802 CG9430 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2438 chr2R 9151367 9151446 + 20 NA exon (FBgn0259219, exon 5 of 5) protein_coding-exon (FBgn0259219, exon 5 of 5) 1416 FBgn0259219 FBgn0259219 FBtr0299738 CG42319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_973 chr2L 14574790 14574844 + 20 NA Intergenic Intergenic -11091 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6669 chrM 696 750 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1436 chr2L 19322186 19322240 + 20 NA Intergenic Intergenic 21907 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1249 chr2L 17202435 17202502 + 20 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 20530 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_85 chr2L 1236891 1236964 + 20 NA Intergenic Intergenic -3111 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5066 chr3R 7541280 7541386 + 20 NA Intergenic Intergenic 3832 FBgn0037940 FBgn0037940 FBtr0082428 CG14720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4005 chr3L 12878600 12878701 + 20 NA exon (FBgn0036321, exon 1 of 1) protein_coding-exon (FBgn0036321, exon 1 of 1) 498 FBgn0036321 FBgn0036321 FBtr0075868 CG14120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4155 chr3L 15420147 15420201 + 20 NA Intergenic Intergenic -10127 FBgn0263616 FBgn0263616 FBtr0309981 CR43625 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5724 chr3R 16325166 16325263 + 20 NA TTS (FBgn0038797) protein_coding-TTS (FBgn0038797) 2434 FBgn0038797 FBgn0038797 FBtr0083892 Dic2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4334 chr3L 18019728 18019782 + 20 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -13662 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_824 chr2L 12764476 12764559 + 20 NA Intergenic Intergenic -2677 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3495 chr3L 1890682 1890736 + 20 NA exon (FBgn0262624, exon 5 of 6) protein_coding-exon (FBgn0262624, exon 5 of 6) 1219 FBgn0262624 FBgn0262624 FBtr0072837 Tmhs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_259 chr2L 4047930 4047986 + 20 NA intron (FBgn0000547, intron 2 of 8) protein_coding-intron (FBgn0000547, intron 2 of 8) 16579 FBgn0000547 FBgn0000547 FBtr0077465 ed protein_coding Nup98-S2-pascual-garcia2017_R1_peak_281 chr2L 4298785 4298871 + 20 NA intron (FBgn0010473, intron 3 of 12) protein_coding-intron (FBgn0010473, intron 3 of 6) 15680 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4467 chr3L 23228366 23228438 + 20 NA intron (FBgn0037212, intron 4 of 10) protein_coding-intron (FBgn0037212, intron 4 of 11) 28633 FBgn0037212 FBgn0037212 FBtr0308331 nAcRalpha-80B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3984 chr3L 12587875 12587929 + 20 NA exon (FBgn0015904, exon 5 of 5) protein_coding-exon (FBgn0015904, exon 5 of 5) 14130 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1850 chr2L 22701990 22702044 + 20 NA Intergenic Intergenic -11009 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_177 chr2L 2462577 2462633 + 20 NA promoter-TSS (FBgn0012016) tRNA-promoter-TSS (FBgn0012016) 12 FBgn0012016 FBgn0012016 FBtr0089298 tRNA:Y1:22Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_4096 chr3L 14372289 14372343 + 20 NA Intergenic Intergenic -2697 FBgn0262580 FBgn0262580 FBtr0304959 CG43120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_704 chr2L 10870397 10870451 + 20 NA exon (FBgn0032311, exon 1 of 1) protein_coding-exon (FBgn0032311, exon 1 of 1) 257 FBgn0032311 FBgn0032311 FBtr0080144 CG12517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1108 chr2L 15624677 15624748 + 20 NA Intergenic Intergenic -1154 FBgn0028946 FBgn0028946 FBtr0080781 Or35a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_92 chr2L 1300776 1300869 + 20 NA Intergenic Intergenic -28339 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1285 chr2L 17562224 17562318 + 20 NA Intergenic Intergenic -4155 FBgn0262398 FBgn0262398 FBtr0304299 mir-124 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_684 chr2L 10623202 10623285 + 20 NA exon (FBgn0051721, exon 7 of 9) protein_coding-exon (FBgn0051721, exon 7 of 9) 16265 FBgn0032271 FBgn0032271 FBtr0080131 CG7329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_346 chr2L 5134488 5134574 + 20 NA exon (FBgn0261836, exon 7 of 18) protein_coding-exon (FBgn0261836, exon 7 of 18) -17218 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2324 chr2R 7419327 7419402 + 20 NA Intergenic Intergenic -3976 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1203 chr2L 16808773 16808831 + 20 NA intron (FBgn0086673, intron 1 of 2) protein_coding-intron (FBgn0086673, intron 1 of 2) 3918 FBgn0086673 FBgn0086673 FBtr0080914 CG13272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5140 chr3R 8689912 8690031 + 20 NA Intergenic Intergenic -5032 FBgn0038088 FBgn0038088 FBtr0082686 CG10126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2091 chr2R 3900085 3900139 + 20 NA exon (FBgn0033250, exon 2 of 9) protein_coding-exon (FBgn0033250, exon 2 of 9) 1147 FBgn0033250 FBgn0033250 FBtr0304750 CG14762 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_737 chr2L 11505229 11505306 + 20 NA intron (FBgn0032362, intron 1 of 2) protein_coding-intron (FBgn0032362, intron 1 of 2) 3516 FBgn0032362 FBgn0032362 FBtr0305261 spz4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6925 chrUextra 12724826 12724880 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3645 chr3L 6104858 6104912 + 20 NA exon (FBgn0005658, exon 1 of 7) protein_coding-exon (FBgn0005658, exon 1 of 7) 318 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_117 chr2L 1467082 1467167 + 20 NA Intergenic Intergenic 24398 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_628 chr2L 9306973 9307037 + 20 NA Intergenic Intergenic -1998 FBgn0262033 FBgn0262033 FBtr0303929 CG42844 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3204 chr2RHet 740029 740083 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_669 chr2L 10133024 10133118 + 20 NA intron (FBgn0262032, intron 1 of 6) protein_coding-intron (FBgn0262032, intron 1 of 6) 4481 FBgn0262032 FBgn0262032 FBtr0303928 CG42843 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_400 chr2L 5853331 5853411 + 20 NA intron (FBgn0085410, intron 8 of 9) protein_coding-intron (FBgn0085410, intron 8 of 9) 26110 FBgn0031745 FBgn0031745 FBtr0079158 CG8965 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_589 chr2L 8852026 8852115 + 20 NA Intergenic Intergenic -10706 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1034 chr2L 14968003 14968097 + 20 NA intron (FBgn0259213, intron 1 of 19) protein_coding-intron (FBgn0259213, intron 1 of 19) 4250 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1798 chr2L 22407369 22407449 + 20 NA Intergenic Intergenic 20916 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_321 chr2L 4673102 4673169 + 20 NA Intergenic Intergenic -9542 FBgn0031620 FBgn0031620 FBtr0077377 CG11929 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_629 chr2L 9324249 9324303 + 20 NA Intergenic Intergenic -3468 FBgn0032109 FBgn0032109 FBtr0273186 CG17005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6666 chr4 1187986 1188040 + 20 NA exon (FBgn0039925, exon 5 of 5) protein_coding-exon (FBgn0039925, exon 5 of 5) 14229 FBgn0002521 FBgn0002521 FBtr0089205 pho protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3172 chr2RHet 445718 445772 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6196 chr3R 24210902 24210956 + 20 NA Intergenic Intergenic 32965 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1624 chr2L 21376755 21376813 + 20 NA exon (FBgn0032945, exon 3 of 3) protein_coding-exon (FBgn0032945, exon 3 of 3) -3216 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1149 chr2L 16096625 16096682 + 20 NA TTS (FBgn0028520) protein_coding-TTS (FBgn0028520) 1644 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4489 chr3L 23646904 23646958 + 20 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -61460 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1982 chr2R 1375772 1375863 + 20 NA intron (FBgn0050440, intron 2 of 7) protein_coding-intron (FBgn0050440, intron 2 of 7) 7524 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1680 chr2L 21858907 21858990 + 20 NA Intergenic Intergenic 30355 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1701 chr2L 21957980 21958098 + 20 NA Intergenic Intergenic 34894 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3834 chr3L 9791566 9791641 + 20 NA promoter-TSS (FBgn0044051) protein_coding-promoter-TSS (FBgn0044051) 69 FBgn0044051 FBgn0044051 FBtr0076328 Ilp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_766 chr2L 11944210 11944264 + 20 NA promoter-TSS (FBgn0005664) protein_coding-promoter-TSS (FBgn0005664) 96 FBgn0005664 FBgn0005664 FBtr0080281 Cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4861 chr3R 4243754 4243808 + 20 NA intron (FBgn0263416, intron 2 of 15) protein_coding-intron (FBgn0263416, intron 2 of 15) 2538 FBgn0037589 FBgn0037589 FBtr0081849 Obp85a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5315 chr3R 11738044 11738098 + 20 NA TTS (FBgn0085304) protein_coding-TTS (FBgn0085304) 1582 FBgn0085304 FBgn0085304 FBtr0112470 CG34275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3955 chr3L 12159114 12159246 + 20 NA exon (FBgn0036260, exon 4 of 4) protein_coding-exon (FBgn0036260, exon 4 of 4) -2345 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1470 chr2L 19729154 19729208 + 20 NA exon (FBgn0000464, exon 14 of 17) protein_coding-exon (FBgn0000464, exon 14 of 17) 6539 FBgn0032815 FBgn0032815 FBtr0331244 CG10462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_948 chr2L 14442638 14442692 + 20 NA Intergenic Intergenic 8257 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_87 chr2L 1246590 1246644 + 20 NA Intergenic Intergenic 6579 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5262 chr3R 10999730 10999784 + 20 NA exon (FBgn0038294, exon 6 of 9) protein_coding-exon (FBgn0038294, exon 6 of 9) 6235 FBgn0038294 FBgn0038294 FBtr0306642 Mf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6291 chr3R 25179688 25179765 + 20 NA Intergenic Intergenic -34390 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1130 chr2L 15943865 15943919 + 20 NA intron (FBgn0028645, intron 1 of 6) protein_coding-intron (FBgn0028645, intron 1 of 6) 2451 FBgn0028857 FBgn0028857 FBtr0300613 CG12448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2739 chr2R 14122824 14122904 + 20 NA exon (FBgn0000658, exon 1 of 1) protein_coding-exon (FBgn0000658, exon 1 of 1) 2596 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1638 chr2L 21649090 21649144 + 20 NA Intergenic Intergenic -8439 FBgn0262620 FBgn0262620 FBtr0305481 CG43144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3941 chr3L 11870247 11870324 + 20 NA Intergenic Intergenic -1930 FBgn0036218 FBgn0036218 FBtr0300724 CG14128 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2530 chr2R 10566438 10566507 + 20 NA promoter-TSS (FBgn0050480) protein_coding-promoter-TSS (FBgn0050480) -831 FBgn0050480 FBgn0050480 FBtr0087478 CG30480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3027 chr2R 19193507 19193561 + 20 NA Intergenic Intergenic 3805 FBgn0034842 FBgn0034842 FBtr0072045 Prosbeta5R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6405 chr3R 26336115 26336169 + 20 NA TTS (FBgn0054041) protein_coding-TTS (FBgn0054041) 1794 FBgn0039783 FBgn0039783 FBtr0085685 PH4alphaNE2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3102 chr2R 20507005 20507059 + 20 NA intron (FBgn0035041, intron 7 of 7) protein_coding-intron (FBgn0035041, intron 7 of 7) -4369 FBgn0035040 FBgn0035040 FBtr0072337 CG4741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2398 chr2R 8583778 8583931 + 20 NA Intergenic Intergenic -3661 FBgn0033769 FBgn0033769 FBtr0087871 CG8768 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1525 chr2L 20377434 20377488 + 20 NA exon (FBgn0032856, exon 6 of 6) protein_coding-exon (FBgn0032856, exon 6 of 6) -3494 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6355 chr3R 25537118 25537266 + 20 NA Intergenic Intergenic -3069 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_951 chr2L 14454655 14454757 + 20 NA Intergenic Intergenic -3784 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2481 chr2R 9664336 9664437 + 20 NA intron (FBgn0033867, intron 4 of 4) protein_coding-intron (FBgn0033867, intron 4 of 4) 3364 FBgn0033868 FBgn0033868 FBtr0332255 S-Lap7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4873 chr3R 4379085 4379161 + 20 NA exon (FBgn0037594, exon 1 of 3) protein_coding-exon (FBgn0037594, exon 1 of 3) 793 FBgn0037594 FBgn0037594 FBtr0081872 Or85d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_359 chr2L 5401105 5401162 + 20 NA Intergenic Intergenic -3209 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1687 chr2L 21875121 21875198 + 20 NA Intergenic Intergenic -19068 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1972 chr2R 1209179 1209233 + 20 NA intron (FBgn0261403, intron 5 of 8) protein_coding-intron (FBgn0261403, intron 6 of 9) 14394 FBgn0261403 FBgn0261403 FBtr0086086 sxc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5717 chr3R 16231283 16231373 + 20 NA intron (FBgn0262869, intron 4 of 20) protein_coding-intron (FBgn0262869, intron 3 of 19) 2240 FBgn0038795 FBgn0038795 FBtr0083894 CG4335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5289 chr3R 11414197 11414310 + 20 NA Intergenic Intergenic -35759 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2199 chr2R 5402001 5402055 + 20 NA intron (FBgn0259246, intron 7 of 20) protein_coding-intron (FBgn0259246, intron 8 of 21) 10735 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6036 chr3R 22538128 22538226 + 20 NA intron (FBgn0023179, intron 1 of 11) protein_coding-intron (FBgn0023179, intron 1 of 11) 1704 FBgn0023179 FBgn0023179 FBtr0085048 amon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6301 chr3R 25250152 25250242 + 20 NA exon (FBgn0004369, exon 6 of 19) protein_coding-exon (FBgn0004369, exon 6 of 19) -55223 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4328 chr3L 17969488 17969546 + 20 NA intron (FBgn0000568, intron 4 of 7) protein_coding-intron (FBgn0000568, intron 2 of 5) 26661 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4114 chr3L 14669747 14669801 + 20 NA intron (FBgn0036436, intron 1 of 1) protein_coding-intron (FBgn0036436, intron 1 of 1) 1473 FBgn0036436 FBgn0036436 FBtr0075712 CG4914 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2637 chr2R 12299625 12299679 + 20 NA intron (FBgn0264273, intron 2 of 15) protein_coding-intron (FBgn0264273, intron 1 of 13) 7251 FBgn0029154 FBgn0029154 FBtr0100116 Menl-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5587 chr3R 14766899 14766990 + 20 NA intron (FBgn0261262, intron 3 of 17) protein_coding-intron (FBgn0261262, intron 3 of 18) -8974 FBgn0263983 FBgn0263983 FBtr0330024 CG43732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5333 chr3R 11924482 11924539 + 20 NA promoter-TSS (FBgn0010379) protein_coding-promoter-TSS (FBgn0010379) -428 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3024 chr2R 19063699 19063796 + 20 NA exon (FBgn0085400, exon 3 of 14) protein_coding-exon (FBgn0085400, exon 3 of 14) -8184 FBgn0034833 FBgn0034833 FBtr0071998 CG13539 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3062 chr2R 19666502 19666603 + 20 NA exon (FBgn0034903, exon 4 of 14) protein_coding-exon (FBgn0034903, exon 4 of 14) 12167 FBgn0034904 FBgn0034904 FBtr0072245 CG15800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3788 chr3L 8634672 8634726 + 20 NA intron (FBgn0052029, intron 2 of 2) protein_coding-intron (FBgn0052029, intron 2 of 2) 1160 FBgn0052029 FBgn0052029 FBtr0076567 Cpr66D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4876 chr3R 4453118 4453174 + 20 NA TTS (FBgn0261929) protein_coding-TTS (FBgn0261929) 8454 FBgn0026399 FBgn0026399 FBtr0310300 Or85e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2584 chr2R 11474038 11474092 + 20 NA Intergenic Intergenic -12569 FBgn0034033 FBgn0034033 FBtr0087349 CG8204 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2787 chr2R 14963862 14963916 + 20 NA intron (FBgn0004168, intron 1 of 10) protein_coding-intron (FBgn0004168, intron 1 of 10) 9229 FBgn0004168 FBgn0004168 FBtr0086577 5-HT1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6783 chrU 1913804 1913919 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1023 chr2L 14914554 14914654 + 20 NA intron (FBgn0259213, intron 15 of 19) protein_coding-intron (FBgn0259213, intron 15 of 19) -10131 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1336 chr2L 18010541 18010668 + 20 NA TTS (FBgn0051740) protein_coding-TTS (FBgn0051740) 871 FBgn0032660 FBgn0032660 FBtr0302031 elfless protein_coding Nup98-S2-pascual-garcia2017_R1_peak_584 chr2L 8827423 8827518 + 20 NA exon (FBgn0029123, exon 1 of 1) protein_coding-exon (FBgn0029123, exon 1 of 1) 1845 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6742 chrU 446049 446114 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2650 chr2R 12438307 12438369 + 20 NA Intergenic Intergenic -1427 FBgn0034135 FBgn0034135 FBtr0087097 Syn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1383 chr2L 18668915 18668969 + 20 NA exon (FBgn0263079, exon 3 of 5) protein_coding-exon (FBgn0263079, exon 3 of 5) 2245 FBgn0263079 FBgn0263079 FBtr0306921 CG43338 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1118 chr2L 15806446 15806500 + 20 NA Intergenic Intergenic 5668 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3758 chr3L 8038281 8038372 + 20 NA intron (FBgn0011817, intron 4 of 8) protein_coding-intron (FBgn0011817, intron 4 of 9) 11149 FBgn0026263 FBgn0026263 FBtr0302329 bip1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5389 chr3R 12523448 12523518 + 20 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) 36865 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_752 chr2L 11751764 11751818 + 20 NA Intergenic Intergenic 1739 FBgn0259960 FBgn0259960 FBtr0300308 CG42470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3736 chr3L 7548047 7548155 + 20 NA TTS (FBgn0035797) protein_coding-TTS (FBgn0035797) 5036 FBgn0035797 FBgn0035797 FBtr0290223 CG14837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3290 chr2RHet 1919526 1919604 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1458 chr2L 19638080 19638134 + 20 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 51484 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2726 chr2R 13898265 13898377 + 20 NA Intergenic Intergenic -2951 FBgn0034286 FBgn0034286 FBtr0300215 dpr13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_844 chr2L 12946626 12946693 + 20 NA Intergenic Intergenic -20090 FBgn0032462 FBgn0032462 FBtr0273445 CG16800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6166 chr3R 23973480 23973534 + 20 NA exon (FBgn0085383, exon 2 of 9) protein_coding-exon (FBgn0085383, exon 2 of 9) 905 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2297 chr2R 7152771 7152825 + 20 NA exon (FBgn0033602, exon 1 of 2) protein_coding-exon (FBgn0033602, exon 1 of 2) 167 FBgn0033602 FBgn0033602 FBtr0088114 Cpr47Ee protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1 chr2L 5796 5850 + 20 NA Intergenic Intergenic -1706 FBgn0031208 FBgn0031208 FBtr0330654 CG11023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3052 chr2R 19575696 19575762 + 20 NA promoter-TSS (FBgn0262728) protein_coding-promoter-TSS (FBgn0262728) 45 FBgn0262728 FBgn0262728 FBtr0301509 Pal2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1311 chr2L 17803845 17803899 + 20 NA intron (FBgn0262018, intron 7 of 14) protein_coding-intron (FBgn0262018, intron 6 of 13) 8800 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_384 chr2L 5708400 5708454 + 20 NA promoter-TSS (FBgn0031730) protein_coding-promoter-TSS (FBgn0031730) -3532 FBgn0031730 FBgn0031730 FBtr0302950 CG7236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6159 chr3R 23911919 23912010 + 20 NA TTS (FBgn0085391) protein_coding-TTS (FBgn0085391) 59630 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6545 chr3RHet 383819 383913 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5680 chr3R 15902248 15902302 + 20 NA Intergenic Intergenic 5897 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2047 chr2R 3184611 3184665 + 20 NA exon (FBgn0003174, exon 3 of 9) protein_coding-exon (FBgn0003174, exon 3 of 9) -14275 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4961 chr3R 6010439 6010493 + 20 NA intron (FBgn0037796, intron 2 of 10) protein_coding-intron (FBgn0037796, intron 2 of 9) 4849 FBgn0037796 FBgn0037796 FBtr0306090 CG12814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4317 chr3L 17695835 17695937 + 20 NA intron (FBgn0052183, intron 1 of 9) protein_coding-intron (FBgn0052183, intron 1 of 9) 12771 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_367 chr2L 5457644 5457698 + 20 NA Intergenic Intergenic -3970 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2870 chr2R 16285234 16285288 + 20 NA Intergenic Intergenic -26579 FBgn0086604 FBgn0086604 FBtr0112774 CG12484 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1139 chr2L 16048132 16048218 + 20 NA exon (FBgn0000182, exon 11 of 11) protein_coding-exon (FBgn0000182, exon 11 of 11) -1820 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5682 chr3R 15907152 15907206 + 20 NA exon (FBgn0003249, exon 1 of 1) protein_coding-exon (FBgn0003249, exon 1 of 1) 993 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6079 chr3R 23152544 23152598 + 20 NA Intergenic Intergenic 4033 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6374 chr3R 25662900 25662964 + 20 NA promoter-TSS (FBgn0260969) protein_coding-promoter-TSS (FBgn0260969) -971 FBgn0260969 FBgn0260969 FBtr0301747 CG42592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1300 chr2L 17706466 17706520 + 20 NA TTS (FBgn0262876) protein_coding-TTS (FBgn0262876) 1812 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_640 chr2L 9582054 9582120 + 20 NA promoter-TSS (FBgn0014179) protein_coding-promoter-TSS (FBgn0014179) -345 FBgn0014179 FBgn0014179 FBtr0079855 gcm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3684 chr3L 6836628 6836682 + 20 NA Intergenic Intergenic 53397 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6442 chr3R 26808639 26808706 + 20 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) 7056 FBgn0051008 FBgn0051008 FBtr0085748 CG31008 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2713 chr2R 13703740 13703863 + 20 NA intron (FBgn0259211, intron 1 of 12) protein_coding-intron (FBgn0259211, intron 2 of 12) -7269 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3666 chr3L 6450068 6450122 + 20 NA intron (FBgn0261801, intron 2 of 6) protein_coding-intron (FBgn0261801, intron 2 of 6) 31429 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3781 chr3L 8465170 8465224 + 20 NA TTS (FBgn0262719) protein_coding-TTS (FBgn0262719) 22175 FBgn0010825 FBgn0010825 FBtr0076618 Gug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6509 chr3R 27491897 27491978 + 20 NA Intergenic Intergenic -3250 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1453 chr2L 19625700 19625851 + 20 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 39152 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5024 chr3R 6928223 6928297 + 20 NA Intergenic Intergenic 13168 FBgn0037860 FBgn0037860 FBtr0082380 CG6629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6373 chr3R 25650854 25650921 + 20 NA exon (FBgn0039704, exon 8 of 8) protein_coding-exon (FBgn0039704, exon 8 of 8) 6053 FBgn0039704 FBgn0039704 FBtr0085486 neo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6173 chr3R 24008558 24008634 + 20 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 35994 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6208 chr3R 24275689 24275744 + 20 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) 31786 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6498 chr3R 27372340 27372410 + 20 NA intron (FBgn0039852, intron 1 of 8) protein_coding-intron (FBgn0039852, intron 1 of 8) 3490 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3948 chr3L 12053671 12053727 + 20 NA intron (FBgn0041096, intron 2 of 6) protein_coding-intron (FBgn0041096, intron 2 of 7) 4260 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1971 chr2R 970785 970839 + 20 NA promoter-TSS (FBgn0263092) pseudogene-promoter-TSS (FBgn0263092) -876 FBgn0263092 FBgn0263092 FBtr0307111 CR43360 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6519 chr3R 27644908 27644977 + 20 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -6624 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1970 chr2R 966569 966623 + 20 NA Intergenic Intergenic 3340 FBgn0263092 FBgn0263092 FBtr0307111 CR43360 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1026 chr2L 14936553 14936627 + 20 NA exon (FBgn0259213, exon 6 of 20) protein_coding-exon (FBgn0259213, exon 6 of 20) 11855 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_673 chr2L 10190443 10190497 + 20 NA exon (FBgn0051874, exon 2 of 2) protein_coding-exon (FBgn0051874, exon 2 of 2) 1026 FBgn0051874 FBgn0051874 FBtr0079964 CG31874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_984 chr2L 14619959 14620013 + 20 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 3717 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6004 chr3R 22319139 22319193 + 20 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 27371 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_504 chr2L 8332050 8332104 + 20 NA intron (FBgn0032022, intron 2 of 2) protein_coding-intron (FBgn0032022, intron 2 of 2) 3029 FBgn0032022 FBgn0032022 FBtr0079603 CG14275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6256 chr3R 24611877 24611944 + 20 NA Intergenic Intergenic -3429 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6213 chr3R 24379981 24380051 + 20 NA Intergenic Intergenic -9492 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_317 chr2L 4600246 4600327 + 20 NA Intergenic Intergenic -8323 FBgn0053196 FBgn0053196 FBtr0332355 dp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1856 chr2L 22705595 22705702 + 20 NA Intergenic Intergenic -14640 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_782 chr2L 12279473 12279535 + 20 NA intron (FBgn0000114, intron 3 of 8) protein_coding-intron (FBgn0000114, intron 4 of 11) -59344 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2052 chr2R 3210690 3210779 + 20 NA exon (FBgn0033159, exon 20 of 24) protein_coding-exon (FBgn0033159, exon 20 of 24) 11821 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3861 chr3L 10582535 10582589 + 20 NA exon (FBgn0052062, exon 13 of 15) protein_coding-exon (FBgn0052062, exon 13 of 15) -30380 FBgn0036085 FBgn0036085 FBtr0076291 CG6527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6657 chr4 1024275 1024362 + 20 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 13967 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_611 chr2L 8929039 8929105 + 20 NA exon (FBgn0085427, exon 9 of 11) protein_coding-exon (FBgn0085427, exon 9 of 11) -4991 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1514 chr2L 20226741 20226826 + 20 NA Intergenic Intergenic -21440 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_927 chr2L 14312546 14312639 + 20 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -15837 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2862 chr2R 16123068 16123181 + 20 NA promoter-TSS (FBgn0034485) protein_coding-promoter-TSS (FBgn0034485) -616 FBgn0034485 FBgn0034485 FBtr0086315 CG11099 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1734 chr2L 22056934 22057094 + 20 NA Intergenic Intergenic -2769 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1144 chr2L 16076673 16076768 + 20 NA exon (FBgn0013433, exon 4 of 8) protein_coding-exon (FBgn0013433, exon 4 of 8) -18289 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2489 chr2R 9732277 9732364 + 20 NA intron (FBgn0033876, intron 1 of 4) protein_coding-intron (FBgn0033876, intron 1 of 4) 1437 FBgn0033876 FBgn0033876 FBtr0087645 synaptogyrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3188 chr2RHet 586280 586416 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6309 chr3R 25335095 25335156 + 20 NA Intergenic Intergenic -5606 FBgn0039668 FBgn0039668 FBtr0085431 Trc8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5307 chr3R 11597608 11597685 + 20 NA Intergenic Intergenic -2451 FBgn0038358 FBgn0038358 FBtr0083170 CG4525 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1435 chr2L 19318254 19318317 + 20 NA Intergenic Intergenic 17979 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3636 chr3L 6021709 6021763 + 20 NA Intergenic Intergenic 5975 FBgn0035661 FBgn0035661 FBtr0077068 CG10477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4458 chr3L 22454128 22454196 + 20 NA promoter-TSS (FBgn0037163) protein_coding-promoter-TSS (FBgn0037163) 69 FBgn0037163 FBgn0037163 FBtr0078508 laza protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3657 chr3L 6285757 6285868 + 20 NA Intergenic Intergenic 17012 FBgn0262787 FBgn0262787 FBtr0305900 CG43168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4253 chr3L 17070020 17070099 + 20 NA exon (FBgn0260943, exon 10 of 10) protein_coding-exon (FBgn0260943, exon 10 of 10) 21346 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_597 chr2L 8870935 8871044 + 20 NA Intergenic Intergenic 4222 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2488 chr2R 9718263 9718317 + 20 NA exon (FBgn0033872, exon 4 of 4) protein_coding-exon (FBgn0033872, exon 4 of 4) 3824 FBgn0033872 FBgn0033872 FBtr0087635 CG6329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6333 chr3R 25494147 25494201 + 20 NA promoter-TSS (FBgn0039677) protein_coding-promoter-TSS (FBgn0039677) 425 FBgn0039676 FBgn0039676 FBtr0332443 ppk20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5283 chr3R 11385952 11386006 + 20 NA Intergenic Intergenic -7485 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4433 chr3L 21314670 21314787 + 20 NA promoter-TSS (FBgn0086913) protein_coding-promoter-TSS (FBgn0086913) -753 FBgn0086913 FBgn0086913 FBtr0331795 Rab26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5408 chr3R 12638687 12638741 + 20 NA intron (FBgn0000014, intron 4 of 5) protein_coding-intron (FBgn0000014, intron 5 of 6) 17053 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_897 chr2L 14005074 14005131 + 20 NA Intergenic Intergenic -3025 FBgn0261582 FBgn0261582 FBtr0302893 CG42692 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2666 chr2R 12650677 12650731 + 20 NA exon (FBgn0034155, exon 3 of 27) protein_coding-exon (FBgn0034155, exon 3 of 27) 2729 FBgn0259738 FBgn0259738 FBtr0300043 CG42392 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2888 chr2R 16688630 16688684 + 20 NA Intergenic Intergenic 8185 FBgn0034551 FBgn0034551 FBtr0071513 CG15225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_22 chr2L 616123 616177 + 20 NA Intergenic Intergenic 5108 FBgn0040106 FBgn0040106 FBtr0308305 lectin-21Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4995 chr3R 6484358 6484426 + 20 NA exon (FBgn0085333, exon 2 of 4) protein_coding-exon (FBgn0085333, exon 2 of 4) 2224 FBgn0085333 FBgn0085333 FBtr0112500 CG34304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_239 chr2L 3606598 3606652 + 20 NA exon (FBgn0002985, exon 1 of 2) protein_coding-exon (FBgn0002985, exon 1 of 2) 123 FBgn0002985 FBgn0002985 FBtr0077557 odd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5467 chr3R 13412003 13412057 + 20 NA Intergenic Intergenic -8078 FBgn0038523 FBgn0038523 FBtr0083460 CG7587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1429 chr2L 19291978 19292084 + 20 NA Intergenic Intergenic 7820 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1810 chr2L 22526881 22526975 + 20 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 54446 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1288 chr2L 17589281 17589364 + 20 NA promoter-TSS (FBgn0032651) protein_coding-promoter-TSS (FBgn0032651) -818 FBgn0032651 FBgn0032651 FBtr0303253 Oli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6499 chr3R 27374179 27374241 + 20 NA intron (FBgn0039852, intron 1 of 8) protein_coding-intron (FBgn0039852, intron 1 of 8) 5325 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_464 chr2L 7147868 7147922 + 20 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -14368 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_461 chr2L 7133092 7133146 + 20 NA exon (FBgn0085407, exon 1 of 6) protein_coding-exon (FBgn0085407, exon 1 of 6) 408 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4057 chr3L 13753839 13753917 + 20 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 42622 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5321 chr3R 11775695 11775804 + 20 NA TTS (FBgn0051088) protein_coding-TTS (FBgn0051088) 916 FBgn0051088 FBgn0051088 FBtr0083241 CG31088 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5146 chr3R 8772565 8772619 + 20 NA Intergenic Intergenic -14882 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_63 chr2L 1020812 1020891 + 20 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) 6039 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2343 chr2R 7592347 7592401 + 20 NA Intergenic Intergenic -2420 FBgn0033648 FBgn0033648 FBtr0088080 Ir48b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1736 chr2L 22060619 22060760 + 20 NA Intergenic Intergenic 4591 FBgn0260996 FBgn0260996 FBtr0301799 CG42597 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5670 chr3R 15792875 15792941 + 20 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) -6327 FBgn0051213 FBgn0051213 FBtr0083824 CG31213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3276 chr2RHet 1900555 1900673 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3563 chr3L 3860316 3860370 + 20 NA exon (FBgn0013751, exon 4 of 6) protein_coding-exon (FBgn0013751, exon 4 of 6) 14137 FBgn0013751 FBgn0013751 FBtr0330071 Awh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1289 chr2L 17601688 17601756 + 20 NA exon (FBgn0261089, exon 3 of 6) protein_coding-exon (FBgn0261089, exon 3 of 6) 7057 FBgn0261089 FBgn0261089 FBtr0303255 Sytalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4284 chr3L 17343527 17343588 + 20 NA promoter-TSS (FBgn0036713) protein_coding-promoter-TSS (FBgn0036713) -791 FBgn0036713 FBgn0036713 FBtr0075241 Mip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6875 chrUextra 238295 238355 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4152 chr3L 15407828 15407917 + 20 NA Intergenic Intergenic 6940 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5970 chr3R 22016623 22016748 + 20 NA promoter-TSS (FBgn0083966) protein_coding-promoter-TSS (FBgn0083966) 242 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6447 chr3R 26848421 26848475 + 20 NA Intergenic Intergenic -5879 FBgn0004573 FBgn0004573 FBtr0085746 5-HT7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_405 chr2L 5940299 5940371 + 20 NA Intergenic Intergenic 2928 FBgn0261055 FBgn0261055 FBtr0301935 Sfp26Ad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2321 chr2R 7414863 7414944 + 20 NA exon (FBgn0000577, exon 1 of 3) protein_coding-exon (FBgn0000577, exon 1 of 3) 485 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3185 chr2RHet 558178 558232 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7052 chrX 5017149 5017203 + 20 NA intron (FBgn0086911, intron 2 of 28) protein_coding-intron (FBgn0086911, intron 2 of 29) -8755 FBgn0029745 FBgn0029745 FBtr0070741 CG6789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_577 chr2L 8806407 8806468 + 20 NA Intergenic Intergenic -2963 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3936 chr3L 11804133 11804187 + 20 NA exon (FBgn0259140, exon 5 of 17) protein_coding-exon (FBgn0259140, exon 5 of 17) 3695 FBgn0259140 FBgn0259140 FBtr0332131 CG42255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_124 chr2L 1527025 1527108 + 20 NA Intergenic Intergenic 4375 FBgn0026397 FBgn0026397 FBtr0077874 Or22b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1911 chr2LHet 250571 250625 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5589 chr3R 14797756 14797856 + 20 NA exon (FBgn0261262, exon 14 of 19) protein_coding-exon (FBgn0261262, exon 14 of 19) 6725 FBgn0038665 FBgn0038665 FBtr0304691 CG12269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6620 chr4 626216 626288 + 20 NA exon (FBgn0028996, exon 1 of 4) protein_coding-exon (FBgn0028996, exon 1 of 4) 2099 FBgn0028996 FBgn0028996 FBtr0089104 onecut protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1553 chr2L 20552381 20552468 + 20 NA Intergenic Intergenic -10000 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1201 chr2L 16807097 16807151 + 20 NA promoter-TSS (FBgn0086673) protein_coding-promoter-TSS (FBgn0086673) 2240 FBgn0086673 FBgn0086673 FBtr0080914 CG13272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6152 chr3R 23845121 23845202 + 20 NA Intergenic Intergenic -7173 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6016 chr3R 22455959 22456032 + 20 NA exon (FBgn0039440, exon 1 of 1) protein_coding-exon (FBgn0039440, exon 1 of 1) 317 FBgn0039440 FBgn0039440 FBtr0114538 TwdlJ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4313 chr3L 17676092 17676147 + 20 NA exon (FBgn0085280, exon 4 of 4) protein_coding-exon (FBgn0085280, exon 4 of 4) -6996 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_282 chr2L 4306318 4306466 + 20 NA TTS (FBgn0010473) protein_coding-TTS (FBgn0010473) -18181 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4182 chr3L 16011990 16012044 + 20 NA promoter-TSS (FBgn0264601) protein_coding-promoter-TSS (FBgn0264601) -600 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4275 chr3L 17262828 17262882 + 20 NA Intergenic Intergenic 5339 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1099 chr2L 15553347 15553401 + 20 NA intron (FBgn0028370, intron 1 of 3) protein_coding-intron (FBgn0028370, intron 1 of 3) 651 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2570 chr2R 11185527 11185581 + 20 NA exon (FBgn0034007, exon 1 of 2) protein_coding-exon (FBgn0034007, exon 1 of 2) 280 FBgn0034007 FBgn0034007 FBtr0087394 CG8102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5869 chr3R 19408587 19408656 + 20 NA Intergenic Intergenic 6916 FBgn0039091 FBgn0039091 FBtr0084486 CG10182 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1297 chr2L 17669339 17669433 + 20 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -35295 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6751 chrU 1045329 1045436 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1333 chr2L 17981090 17981157 + 20 NA exon (FBgn0023096, exon 5 of 25) protein_coding-exon (FBgn0023096, exon 5 of 25) 1349 FBgn0023096 FBgn0023096 FBtr0273418 btv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1907 chr2LHet 194027 194081 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1642 chr2L 21712923 21712977 + 20 NA exon (FBgn0051619, exon 11 of 19) protein_coding-exon (FBgn0051619, exon 11 of 19) 28768 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6456 chr3R 26921861 26921915 + 20 NA intron (FBgn0039816, intron 1 of 3) protein_coding-intron (FBgn0039816, intron 1 of 3) 1152 FBgn0039816 FBgn0039816 FBtr0085741 CG11317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3852 chr3L 10200176 10200230 + 20 NA Intergenic Intergenic -5578 FBgn0000451 FBgn0000451 FBtr0301385 ect protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2443 chr2R 9183445 9183517 + 20 NA promoter-TSS (FBgn0052843) protein_coding-promoter-TSS (FBgn0052843) -52 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4851 chr3R 4150496 4150577 + 20 NA exon (FBgn0037577, exon 3 of 3) protein_coding-exon (FBgn0037577, exon 3 of 3) 479 FBgn0037577 FBgn0037577 FBtr0081837 CG7443 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1293 chr2L 17620115 17620233 + 20 NA Intergenic Intergenic 6172 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1887 chr2L 22924992 22925046 + 20 NA Intergenic Intergenic -6459 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4085 chr3L 14165177 14165237 + 20 NA Intergenic Intergenic 6513 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5697 chr3R 16025133 16025224 + 20 NA Intergenic Intergenic -5353 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6140 chr3R 23725122 23725205 + 20 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 6402 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_969 chr2L 14556586 14556640 + 20 NA Intergenic Intergenic 7113 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4615 chr3R 710509 710563 + 20 NA Intergenic Intergenic -6281 FBgn0020280 FBgn0020280 FBtr0078852 laf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2889 chr2R 16703187 16703282 + 20 NA Intergenic Intergenic 16685 FBgn0016984 FBgn0016984 FBtr0071563 sktl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_238 chr2L 3599026 3599080 + 20 NA Intergenic Intergenic 7695 FBgn0002985 FBgn0002985 FBtr0077557 odd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6789 chrU 1971607 1971740 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_257 chr2L 3940967 3941021 + 20 NA intron (FBgn0051774, intron 3 of 9) protein_coding-intron (FBgn0051774, intron 3 of 8) -26706 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1884 chr2L 22909680 22909830 + 20 NA intron (FBgn0250907, intron 2 of 8) protein_coding-intron (FBgn0250907, intron 2 of 8) 8805 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6150 chr3R 23838834 23838901 + 20 NA Intergenic Intergenic -13467 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4266 chr3L 17164093 17164147 + 20 NA intron (FBgn0260943, intron 4 of 14) protein_coding-intron (FBgn0260943, intron 4 of 14) 4157 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6321 chr3R 25399773 25399874 + 20 NA Intergenic Intergenic 13999 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4785 chr3R 3114739 3114793 + 20 NA intron (FBgn0259172, intron 7 of 8) protein_coding-intron (FBgn0259172, intron 6 of 7) 3082 FBgn0045843 FBgn0045843 FBtr0081581 RacGAP84C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4849 chr3R 4105989 4106043 + 20 NA Intergenic Intergenic 2502 FBgn0010433 FBgn0010433 FBtr0081828 ato protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1709 chr2L 21970826 21970931 + 20 NA Intergenic Intergenic 22055 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7020 chrX 2847833 2847887 + 20 NA exon (FBgn0003285, exon 8 of 8) protein_coding-exon (FBgn0003285, exon 8 of 8) 5793 FBgn0029648 FBgn0029648 FBtr0070558 CG3603 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_952 chr2L 14455370 14455440 + 20 NA Intergenic Intergenic -4483 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6576 chr3RHet 1700670 1700724 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1558 chr2L 20584776 20584878 + 20 NA Intergenic Intergenic 19369 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6497 chr3R 27356159 27356278 + 20 NA Intergenic Intergenic -12667 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5482 chr3R 13545927 13545983 + 20 NA exon (FBgn0261987, exon 2 of 8) protein_coding-exon (FBgn0261987, exon 2 of 8) 781 FBgn0261987 FBgn0261987 FBtr0083508 Pxt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1125 chr2L 15890846 15890953 + 20 NA exon (FBgn0041183, exon 8 of 9) protein_coding-exon (FBgn0041183, exon 8 of 9) 2912 FBgn0041183 FBgn0041183 FBtr0080811 TepI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5376 chr3R 12339783 12339837 + 20 NA exon (FBgn0259244, exon 2 of 17) protein_coding-exon (FBgn0259244, exon 2 of 17) 11287 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2641 chr2R 12350087 12350170 + 20 NA Intergenic Intergenic -4086 FBgn0261292 FBgn0261292 FBtr0091520 CheB53a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4649 chr3R 1246340 1246394 + 20 NA intron (FBgn0037326, intron 2 of 7) protein_coding-intron (FBgn0037326, intron 2 of 7) 6092 FBgn0037326 FBgn0037326 FBtr0078679 CG14669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3918 chr3L 11391694 11391778 + 20 NA Intergenic Intergenic 3946 FBgn0036156 FBgn0036156 FBtr0076172 CG11726 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3373 chr2RHet 2352515 2352569 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2352 chr2R 7708193 7708263 + 20 NA Intergenic Intergenic -4642 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5984 chr3R 22132205 22132259 + 20 NA Intergenic Intergenic 18765 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1837 chr2L 22619799 22619853 + 20 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 24701 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6887 chrUextra 560191 560245 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_438 chr2L 6746630 6746684 + 20 NA intron (FBgn0031855, intron 1 of 1) protein_coding-intron (FBgn0031855, intron 1 of 1) -1048 FBgn0051910 FBgn0051910 FBtr0079304 CG31910 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2482 chr2R 9669826 9669880 + 20 NA intron (FBgn0033867, intron 4 of 4) protein_coding-intron (FBgn0033867, intron 4 of 4) -1647 FBgn0264358 FBgn0264358 FBtr0332253 CR43810 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1347 chr2L 18094225 18094324 + 20 NA Intergenic Intergenic -2036 FBgn0032663 FBgn0032663 FBtr0081045 CG15153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5284 chr3R 11393718 11393772 + 20 NA Intergenic Intergenic -15251 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2485 chr2R 9687331 9687423 + 20 NA intron (FBgn0033869, intron 2 of 4) protein_coding-intron (FBgn0033869, intron 2 of 4) 5095 FBgn0033869 FBgn0033869 FBtr0087630 Cpr50Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2359 chr2R 7759749 7759825 + 20 NA exon (FBgn0033661, exon 8 of 13) protein_coding-exon (FBgn0033661, exon 8 of 13) 5339 FBgn0260437 FBgn0260437 FBtr0300860 CR42532 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3225 chr2RHet 1298276 1298462 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_884 chr2L 13736520 13736586 + 20 NA exon (FBgn0051813, exon 1 of 1) protein_coding-exon (FBgn0051813, exon 1 of 1) 413 FBgn0051813 FBgn0051813 FBtr0080531 CG31813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6346 chr3R 25527580 25527692 + 20 NA Intergenic Intergenic 9323 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4856 chr3R 4160824 4160907 + 20 NA Intergenic Intergenic -1351 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2697 chr2R 13387928 13388005 + 20 NA Intergenic Intergenic -2245 FBgn0262720 FBgn0262720 FBtr0305704 CG43164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5097 chr3R 8104927 8105048 + 20 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) -1887 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2611 chr2R 11953916 11953970 + 20 NA Intergenic Intergenic -1147 FBgn0262446 FBgn0262446 FBtr0304457 mir-137 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7235 chrX 18039441 18039495 + 20 NA Intergenic Intergenic 6809 FBgn0262874 FBgn0262874 FBtr0306281 CG43229 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1136 chr2L 16025308 16025362 + 20 NA intron (FBgn0028644, intron 2 of 7) protein_coding-intron (FBgn0028644, intron 2 of 7) -19056 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7063 chrX 5745031 5745085 + 20 NA Intergenic Intergenic -2778 FBgn0262610 FBgn0262610 FBtr0305284 CG43136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5714 chr3R 16203192 16203246 + 20 NA Intergenic Intergenic 17189 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1000 chr2L 14719534 14719588 + 20 NA Intergenic Intergenic 5784 FBgn0085194 FBgn0085194 FBtr0112356 CG34165 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6135 chr3R 23677027 23677133 + 20 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) 5408 FBgn0039551 FBgn0039551 FBtr0085226 Or98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_129 chr2L 1565751 1565805 + 20 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 10648 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5119 chr3R 8467740 8467813 + 20 NA exon (FBgn0038070, exon 1 of 3) protein_coding-exon (FBgn0038070, exon 1 of 3) 519 FBgn0038070 FBgn0038070 FBtr0301150 CG6753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5194 chr3R 9558656 9558743 + 20 NA intron (FBgn0085412, intron 2 of 12) protein_coding-intron (FBgn0085412, intron 2 of 12) -14801 FBgn0038175 FBgn0038175 FBtr0082838 CG9602 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4545 chr3LHet 235168 235238 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3483 chr3L 1686578 1686665 + 20 NA intron (FBgn0035260, intron 1 of 3) protein_coding-intron (FBgn0035260, intron 1 of 3) -2188 FBgn0035260 FBgn0035260 FBtr0303103 CG7991 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1213 chr2L 16928357 16928431 + 20 NA Intergenic Intergenic 16980 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_290 chr2L 4349173 4349227 + 20 NA Intergenic Intergenic -3775 FBgn0031596 FBgn0031596 FBtr0077428 CG15429 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2326 chr2R 7432197 7432251 + 20 NA Intergenic Intergenic -16836 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_262 chr2L 4099744 4099807 + 20 NA exon (FBgn0000547, exon 6 of 9) protein_coding-exon (FBgn0000547, exon 6 of 9) 13885 FBgn0086032 FBgn0086032 FBtr0114308 snoRNA:Me28S-C437 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_258 chr2L 3983241 3983298 + 20 NA intron (FBgn0051774, intron 2 of 9) protein_coding-intron (FBgn0051774, intron 2 of 8) 8444 FBgn0051774 FBgn0051774 FBtr0308126 fred protein_coding Nup98-S2-pascual-garcia2017_R1_peak_928 chr2L 14312750 14312806 + 20 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -15651 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_70 chr2L 1055096 1055216 + 20 NA intron (FBgn0003310, intron 2 of 4) protein_coding-intron (FBgn0003310, intron 2 of 4) 17910 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4439 chr3L 21585512 21585592 + 20 NA intron (FBgn0261953, intron 1 of 7) protein_coding-intron (FBgn0261953, intron 1 of 7) -2145 FBgn0264568 FBgn0264568 FBtr0333469 CR43940 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3602 chr3L 5016121 5016175 + 20 NA intron (FBgn0005775, intron 3 of 7) protein_coding-intron (FBgn0005775, intron 3 of 7) -4015 FBgn0035585 FBgn0035585 FBtr0073372 CG12027 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4175 chr3L 15906574 15906666 + 20 NA intron (FBgn0036544, intron 1 of 15) protein_coding-intron (FBgn0036544, intron 1 of 15) 11341 FBgn0036544 FBgn0036544 FBtr0334071 sff protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3321 chr2RHet 1991413 1991545 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5918 chr3R 21020591 21020645 + 20 NA promoter-TSS (FBgn0039288) protein_coding-promoter-TSS (FBgn0039288) -631 FBgn0039288 FBgn0039288 FBtr0084804 CG13653 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1876 chr2L 22893596 22893686 + 20 NA exon (FBgn0250907, exon 9 of 9) protein_coding-exon (FBgn0250907, exon 9 of 9) 19107 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5636 chr3R 15444230 15444284 + 20 NA exon (FBgn0038720, exon 4 of 7) protein_coding-exon (FBgn0038720, exon 4 of 7) 2603 FBgn0038720 FBgn0038720 FBtr0083810 CG6231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2266 chr2R 6302828 6302882 + 20 NA intron (FBgn0261698, intron 1 of 27) protein_coding-intron (FBgn0261698, intron 1 of 27) 1646 FBgn0261698 FBgn0261698 FBtr0303082 CG42732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4511 chr3L 23874147 23874240 + 20 NA TTS (FBgn0264569) ncRNA-TTS (FBgn0264569) 2049 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3115 chr2R 20741648 20741735 + 20 NA Intergenic Intergenic 5192 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1100 chr2L 15571881 15571942 + 20 NA intron (FBgn0028370, intron 2 of 3) protein_coding-intron (FBgn0028370, intron 2 of 3) 19188 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1834 chr2L 22614795 22614872 + 20 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 29694 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_698 chr2L 10798575 10798629 + 20 NA intron (FBgn0051869, intron 2 of 7) protein_coding-intron (FBgn0051869, intron 1 of 6) 2244 FBgn0051869 FBgn0051869 FBtr0290246 CG31869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3210 chr2RHet 824748 824859 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1741 chr2L 22074566 22074620 + 20 NA Intergenic Intergenic 3440 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6294 chr3R 25188339 25188422 + 20 NA Intergenic Intergenic -43044 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6108 chr3R 23451440 23451494 + 20 NA exon (FBgn0039529, exon 1 of 4) protein_coding-exon (FBgn0039529, exon 1 of 4) 264 FBgn0039529 FBgn0039529 FBtr0085200 CG5612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1474 chr2L 19750414 19750468 + 20 NA exon (FBgn0032817, exon 6 of 8) protein_coding-exon (FBgn0032817, exon 6 of 8) 6426 FBgn0032817 FBgn0032817 FBtr0081324 CG10631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5255 chr3R 10800497 10800551 + 20 NA Intergenic Intergenic -39968 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5204 chr3R 9708364 9708451 + 20 NA Intergenic Intergenic -7769 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4259 chr3L 17140458 17140537 + 20 NA exon (FBgn0260943, exon 1 of 11) protein_coding-exon (FBgn0260943, exon 1 of 11) -19466 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1646 chr2L 21720485 21720553 + 20 NA TTS (FBgn0051619) protein_coding-TTS (FBgn0051619) 36337 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5921 chr3R 21185467 21185556 + 20 NA exon (FBgn0039331, exon 2 of 2) protein_coding-exon (FBgn0039331, exon 2 of 2) 1504 FBgn0039331 FBgn0039331 FBtr0273265 CG11913 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5656 chr3R 15667414 15667468 + 20 NA intron (FBgn0051459, intron 3 of 3) protein_coding-intron (FBgn0051459, intron 3 of 3) 874 FBgn0051459 FBgn0051459 FBtr0083812 CG31459 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4457 chr3L 22444453 22444535 + 20 NA Intergenic Intergenic -2979 FBgn0037162 FBgn0037162 FBtr0078503 CG11449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2212 chr2R 5545784 5545838 + 20 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) -2919 FBgn0011921 FBgn0011921 FBtr0088465 tRNA:M3:46A tRNA Nup98-S2-pascual-garcia2017_R1_peak_1039 chr2L 15016932 15016995 + 20 NA promoter-TSS (FBgn0260446) protein_coding-promoter-TSS (FBgn0260446) -191 FBgn0260446 FBgn0260446 FBtr0304731 GABA-B-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1849 chr2L 22701688 22701804 + 20 NA Intergenic Intergenic -10738 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_470 chr2L 7303638 7303739 + 20 NA Intergenic Intergenic -3473 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4256 chr3L 17076608 17076662 + 20 NA intron (FBgn0260943, intron 8 of 14) protein_coding-intron (FBgn0260943, intron 8 of 14) 27922 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2586 chr2R 11491227 11491329 + 20 NA Intergenic Intergenic -10329 FBgn0260429 FBgn0260429 FBtr0304712 CG42524 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1962 chr2R 849072 849186 + 20 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 11957 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1818 chr2L 22555108 22555162 + 20 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 82653 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2636 chr2R 12298491 12298545 + 20 NA intron (FBgn0264273, intron 2 of 15) protein_coding-intron (FBgn0264273, intron 1 of 13) 8385 FBgn0029154 FBgn0029154 FBtr0100116 Menl-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_348 chr2L 5163933 5163987 + 20 NA exon (FBgn0261836, exon 6 of 6) protein_coding-exon (FBgn0261836, exon 6 of 6) 12211 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4217 chr3L 16464471 16464557 + 20 NA exon (FBgn0004569, exon 4 of 4) protein_coding-exon (FBgn0004569, exon 4 of 4) 12236 FBgn0004569 FBgn0004569 FBtr0075408 aos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3863 chr3L 10587475 10587547 + 20 NA TTS (FBgn0052062) protein_coding-TTS (FBgn0052062) 29165 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5663 chr3R 15722155 15722251 + 20 NA exon (FBgn0038744, exon 5 of 9) protein_coding-exon (FBgn0038744, exon 5 of 9) 5633 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6255 chr3R 24611677 24611785 + 20 NA Intergenic Intergenic -3608 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2698 chr2R 13390177 13390244 + 20 NA promoter-TSS (FBgn0262720) protein_coding-promoter-TSS (FBgn0262720) -1 FBgn0262720 FBgn0262720 FBtr0305704 CG43164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_463 chr2L 7147764 7147825 + 20 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -14267 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5427 chr3R 12776794 12776861 + 20 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -19492 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1764 chr2L 22201038 22201114 + 20 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 13189 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4617 chr3R 729533 729587 + 20 NA Intergenic Intergenic -2788 FBgn0004913 FBgn0004913 FBtr0100159 Gnf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6445 chr3R 26823107 26823179 + 20 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) -4964 FBgn0051007 FBgn0051007 FBtr0085747 CG31007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6550 chr3RHet 626658 626736 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5935 chr3R 21690861 21690915 + 20 NA Intergenic Intergenic -1934 FBgn0039380 FBgn0039380 FBtr0301147 CG5890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_315 chr2L 4525107 4525192 + 20 NA exon (FBgn0053196, exon 27 of 47) protein_coding-exon (FBgn0053196, exon 27 of 47) -48125 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3462 chr3L 1178936 1179016 + 20 NA Intergenic Intergenic -1700 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7194 chrX 13764593 13764688 + 20 NA exon (FBgn0263115, exon 6 of 8) protein_coding-exon (FBgn0263115, exon 6 of 8) -13483 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_793 chr2L 12393396 12393487 + 20 NA exon (FBgn0262475, exon 8 of 10) protein_coding-exon (FBgn0262475, exon 8 of 10) -4833 FBgn0041195 FBgn0041195 FBtr0080365 Pkd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4356 chr3L 18314570 18314624 + 20 NA Intergenic Intergenic -17080 FBgn0015946 FBgn0015946 FBtr0075130 grim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4281 chr3L 17309445 17309511 + 20 NA Intergenic Intergenic 1354 FBgn0262376 FBgn0262376 FBtr0304211 mir-219 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4781 chr3R 3061073 3061132 + 20 NA intron (FBgn0037487, intron 2 of 5) protein_coding-intron (FBgn0037487, intron 2 of 5) -6380 FBgn0037488 FBgn0037488 FBtr0303218 CG14607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5314 chr3R 11714910 11714974 + 20 NA TTS (FBgn0038380) protein_coding-TTS (FBgn0038380) 895 FBgn0038380 FBgn0038380 FBtr0083249 CG14877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5012 chr3R 6734173 6734229 + 20 NA Intergenic Intergenic -14949 FBgn0037855 FBgn0037855 FBtr0302935 CG6621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3130 chr2R 21067260 21067330 + 20 NA Intergenic Intergenic -3057 FBgn0004181 FBgn0004181 FBtr0072454 Peb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3078 chr2R 20106640 20106694 + 20 NA intron (FBgn0050419, intron 1 of 1) protein_coding-intron (FBgn0050419, intron 1 of 1) 10644 FBgn0050419 FBgn0050419 FBtr0072275 CG30419 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2289 chr2R 6854413 6854498 + 20 NA Intergenic Intergenic -25249 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7266 chrX 20477557 20477611 + 20 NA intron (FBgn0083981, intron 1 of 5) protein_coding-intron (FBgn0083981, intron 1 of 5) 17216 FBgn0083981 FBgn0083981 FBtr0331160 RunxA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4444 chr3L 21666416 21666470 + 20 NA exon (FBgn0037115, exon 2 of 2) protein_coding-exon (FBgn0037115, exon 2 of 2) 1204 FBgn0037115 FBgn0037115 FBtr0078429 CG11249 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3011 chr2R 18907648 18907702 + 20 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) -21269 FBgn0034808 FBgn0034808 FBtr0071988 CG9896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5649 chr3R 15576818 15576915 + 20 NA intron (FBgn0024963, intron 1 of 12) protein_coding-intron (FBgn0024963, intron 1 of 11) -6667 FBgn0263499 FBgn0263499 FBtr0309521 CR43488 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6835 chrU 4477063 4477139 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5792 chr3R 17332293 17332355 + 20 NA intron (FBgn0004863, intron 2 of 3) protein_coding-intron (FBgn0004863, intron 2 of 3) 6347 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_903 chr2L 14056211 14056277 + 20 NA intron (FBgn0028875, intron 2 of 13) protein_coding-intron (FBgn0028875, intron 2 of 13) 8662 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5031 chr3R 7018112 7018186 + 20 NA Intergenic Intergenic -3677 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5611 chr3R 15119806 15119860 + 20 NA Intergenic Intergenic 5754 FBgn0263405 FBgn0263405 FBtr0309184 CR43451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2604 chr2R 11793777 11793831 + 20 NA intron (FBgn0264089, intron 1 of 20) protein_coding-intron (FBgn0264089, intron 1 of 19) -9872 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_779 chr2L 12187892 12187946 + 20 NA intron (FBgn0000114, intron 1 of 8) protein_coding-intron (FBgn0000114, intron 1 of 8) -10167 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6522 chr3R 27650261 27650321 + 20 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -1275 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2547 chr2R 10834289 10834343 + 20 NA exon (FBgn0261854, exon 8 of 10) protein_coding-exon (FBgn0261854, exon 8 of 10) 2936 FBgn0261854 FBgn0261854 FBtr0303437 aPKC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2158 chr2R 4751175 4751231 + 20 NA intron (FBgn0011286, intron 2 of 27) protein_coding-intron (FBgn0011286, intron 2 of 26) 3334 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4362 chr3L 18483383 18483437 + 20 NA intron (FBgn0036789, intron 1 of 3) protein_coding-intron (FBgn0036789, intron 1 of 3) 12247 FBgn0036789 FBgn0036789 FBtr0330088 AlCR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7215 chrX 16110998 16111168 + 20 NA promoter-TSS (FBgn0000459) protein_coding-promoter-TSS (FBgn0000459) -304 FBgn0000459 FBgn0000459 FBtr0100384 disco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3578 chr3L 4307599 4307730 + 20 NA promoter-TSS (FBgn0066365) protein_coding-promoter-TSS (FBgn0066365) -5819 FBgn0052251 FBgn0052251 FBtr0073286 CG32251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2680 chr2R 13080316 13080382 + 20 NA Intergenic Intergenic -2359 FBgn0034205 FBgn0034205 FBtr0086990 CG10950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6992 chrX 1466097 1466163 + 20 NA intron (FBgn0025390, intron 3 of 7) protein_coding-intron (FBgn0025390, intron 3 of 7) -13697 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4257 chr3L 17090271 17090329 + 20 NA intron (FBgn0260943, intron 7 of 14) protein_coding-intron (FBgn0260943, intron 7 of 14) 41587 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5974 chr3R 22095099 22095207 + 20 NA exon (FBgn0039420, exon 4 of 8) protein_coding-exon (FBgn0039420, exon 4 of 8) 6769 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4682 chr3R 1877358 1877412 + 20 NA Intergenic Intergenic 5874 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_416 chr2L 6253015 6253069 + 20 NA promoter-TSS (FBgn0053531) protein_coding-promoter-TSS (FBgn0053531) -81 FBgn0053531 FBgn0053531 FBtr0301305 Ddr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6032 chr3R 22521008 22521094 + 20 NA Intergenic Intergenic -1806 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2642 chr2R 12354639 12354693 + 20 NA exon (FBgn0261292, exon 2 of 3) protein_coding-exon (FBgn0261292, exon 2 of 3) 452 FBgn0261292 FBgn0261292 FBtr0091520 CheB53a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5930 chr3R 21653168 21653237 + 20 NA Intergenic Intergenic 2285 FBgn0011670 FBgn0011670 FBtr0084916 Mst57Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_950 chr2L 14453294 14453348 + 20 NA Intergenic Intergenic -2399 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5928 chr3R 21574777 21574831 + 20 NA exon (FBgn0066101, exon 4 of 12) protein_coding-exon (FBgn0066101, exon 4 of 12) -8617 FBgn0051092 FBgn0051092 FBtr0113387 LpR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1152 chr2L 16124246 16124313 + 20 NA Intergenic Intergenic -9229 FBgn0028884 FBgn0028884 FBtr0080816 CG4892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3464 chr3L 1203995 1204055 + 20 NA promoter-TSS (FBgn0063667) protein_coding-promoter-TSS (FBgn0063667) 767 FBgn0035189 FBgn0035189 FBtr0072635 CG9119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5174 chr3R 9249798 9249852 + 20 NA TTS (FBgn0038153) protein_coding-TTS (FBgn0038153) -2344 FBgn0000046 FBgn0000046 FBtr0082786 Act87E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_265 chr2L 4136296 4136354 + 20 NA Intergenic Intergenic -12954 FBgn0031585 FBgn0031585 FBtr0077468 CG2955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4163 chr3L 15708307 15708361 + 20 NA Intergenic Intergenic -1219 FBgn0260777 FBgn0260777 FBtr0331799 CG42571 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3687 chr3L 6892055 6892136 + 20 NA Intergenic Intergenic 14969 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5460 chr3R 13323000 13323087 + 20 NA intron (FBgn0261046, intron 4 of 34) protein_coding-intron (FBgn0261046, intron 5 of 34) 8346 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_276 chr2L 4244607 4244661 + 20 NA Intergenic Intergenic -12938 FBgn0031591 FBgn0031591 FBtr0077471 CG15425 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3408 chr3L 396604 396692 + 20 NA Intergenic Intergenic 3054 FBgn0264700 FBgn0264700 FBtr0333900 CR43969 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5565 chr3R 14426752 14426836 + 20 NA TTS (FBgn0038630) protein_coding-TTS (FBgn0038630) 2316 FBgn0038630 FBgn0038630 FBtr0083636 CG14305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6649 chr4 1000649 1000724 + 20 NA Intergenic Intergenic 4892 FBgn0083990 FBgn0083990 FBtr0111046 sphinx ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1295 chr2L 17652687 17652741 + 20 NA exon (FBgn0015609, exon 19 of 22) protein_coding-exon (FBgn0015609, exon 19 of 22) 24855 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2533 chr2R 10618691 10618749 + 20 NA Intergenic Intergenic 8027 FBgn0263376 FBgn0263376 FBtr0309057 CR43428 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2500 chr2R 10063115 10063219 + 20 NA intron (FBgn0000289, intron 1 of 11) protein_coding-intron (FBgn0000289, intron 1 of 9) 1992 FBgn0000289 FBgn0000289 FBtr0112795 cg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1967 chr2R 858280 858397 + 20 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 21166 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3963 chr3L 12310718 12310775 + 20 NA Intergenic Intergenic -11586 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1868 chr2L 22746658 22746712 + 20 NA TTS (FBgn0041004) protein_coding-TTS (FBgn0041004) 9733 FBgn0041004 FBgn0041004 FBtr0306550 CG17715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2866 chr2R 16225851 16225932 + 20 NA Intergenic Intergenic -3642 FBgn0034505 FBgn0034505 FBtr0086286 CG16739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_362 chr2L 5407696 5407765 + 20 NA exon (FBgn0016660, exon 3 of 6) protein_coding-exon (FBgn0016660, exon 3 of 6) 3388 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3075 chr2R 20092328 20092400 + 20 NA exon (FBgn0034990, exon 2 of 3) protein_coding-exon (FBgn0034990, exon 2 of 3) 2082 FBgn0034990 FBgn0034990 FBtr0072276 CG11406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_139 chr2L 1627885 1627939 + 20 NA Intergenic Intergenic -13730 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1489 chr2L 19917021 19917116 + 20 NA intron (FBgn0263873, intron 6 of 15) protein_coding-intron (FBgn0263873, intron 7 of 15) -2777 FBgn0264376 FBgn0264376 FBtr0332238 CR43828 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6617 chr4 599427 599496 + 20 NA TTS (FBgn0040324) protein_coding-TTS (FBgn0040324) -4310 FBgn0039911 FBgn0039911 FBtr0089080 CG1909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1891 chr2L 22939586 22939640 + 20 NA Intergenic Intergenic -21053 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4830 chr3R 3884892 3884980 + 20 NA promoter-TSS (FBgn0037546) protein_coding-promoter-TSS (FBgn0037546) -70 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1688 chr2L 21880552 21880651 + 20 NA Intergenic Intergenic -13626 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5973 chr3R 22031547 22031660 + 20 NA Intergenic Intergenic -14676 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5696 chr3R 16022832 16022886 + 20 NA Intergenic Intergenic -7672 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4789 chr3R 3127622 3127693 + 20 NA exon (FBgn0259172, exon 1 of 8) protein_coding-exon (FBgn0259172, exon 1 of 8) -2657 FBgn0260713 FBgn0260713 FBtr0301214 CG42544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_453 chr2L 6986705 6986759 + 20 NA intron (FBgn0031879, intron 4 of 13) protein_coding-intron (FBgn0031879, intron 4 of 11) 14489 FBgn0262616 FBgn0262616 FBtr0305347 CR43142 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_192 chr2L 2716227 2716281 + 20 NA intron (FBgn0051690, intron 5 of 7) protein_coding-intron (FBgn0051690, intron 6 of 8) -14584 FBgn0031449 FBgn0031449 FBtr0077708 CG31689 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_81 chr2L 1209637 1209691 + 20 NA Intergenic Intergenic 5423 FBgn0031324 FBgn0031324 FBtr0114498 CG14342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1826 chr2L 22593045 22593127 + 20 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 51441 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5945 chr3R 21758352 21758481 + 20 NA TTS (FBgn0054024) ncRNA-TTS (FBgn0054024) 1293 FBgn0054024 FBgn0054024 FBtr0308933 CR34024 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4482 chr3L 23582681 23582735 + 20 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 33683 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1365 chr2L 18296838 18296898 + 20 NA exon (FBgn0032677, exon 1 of 1) protein_coding-exon (FBgn0032677, exon 1 of 1) 1964 FBgn0032677 FBgn0032677 FBtr0081050 CG5790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5385 chr3R 12436559 12436635 + 20 NA TTS (FBgn0038448) protein_coding-TTS (FBgn0038448) 1117 FBgn0027109 FBgn0027109 FBtr0331686 npf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3865 chr3L 10589228 10589282 + 20 NA Intergenic Intergenic 27421 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4739 chr3R 2618249 2618340 + 20 NA exon (FBgn0000439, exon 1 of 5) protein_coding-exon (FBgn0000439, exon 1 of 5) 736 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4375 chr3L 18911968 18912022 + 20 NA TTS (FBgn0036832) protein_coding-TTS (FBgn0036832) 1314 FBgn0036831 FBgn0036831 FBtr0075069 CG6839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_38 chr2L 778377 778433 + 20 NA promoter-TSS (FBgn0031277) protein_coding-promoter-TSS (FBgn0031277) -768 FBgn0031277 FBgn0031277 FBtr0078005 CG13947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3664 chr3L 6395814 6395899 + 20 NA intron (FBgn0261801, intron 1 of 6) protein_coding-intron (FBgn0261801, intron 1 of 6) 2164 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6029 chr3R 22515480 22515534 + 20 NA Intergenic Intergenic 3738 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_733 chr2L 11440973 11441027 + 20 NA intron (FBgn0261648, intron 1 of 3) protein_coding-intron (FBgn0261648, intron 1 of 3) 4603 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5252 chr3R 10766731 10766804 + 20 NA Intergenic Intergenic 22365 FBgn0038279 FBgn0038279 FBtr0083004 CG3837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6119 chr3R 23569743 23569815 + 20 NA exon (FBgn0005659, exon 2 of 5) protein_coding-exon (FBgn0005659, exon 2 of 5) 7517 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_576 chr2L 8805882 8805936 + 20 NA Intergenic Intergenic -3491 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3570 chr3L 3996043 3996109 + 20 NA Intergenic Intergenic -7404 FBgn0035482 FBgn0035482 FBtr0307170 CG14985 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6061 chr3R 22916016 22916070 + 20 NA exon (FBgn0039481, exon 2 of 2) protein_coding-exon (FBgn0039481, exon 2 of 2) 809 FBgn0039481 FBgn0039481 FBtr0085135 Cpr97Eb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_210 chr2L 3108765 3108826 + 20 NA promoter-TSS (FBgn0005779) protein_coding-promoter-TSS (FBgn0005779) -653 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6506 chr3R 27475938 27475992 + 20 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) -19222 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1318 chr2L 17839556 17839636 + 20 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 1 of 13) -26924 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6268 chr3R 24840799 24840853 + 20 NA intron (FBgn0039620, intron 1 of 9) protein_coding-intron (FBgn0039620, intron 1 of 9) 5302 FBgn0039620 FBgn0039620 FBtr0085345 CG1443 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5612 chr3R 15154829 15154883 + 20 NA promoter-TSS (FBgn0262903) ncRNA-promoter-TSS (FBgn0262903) -602 FBgn0262903 FBgn0262903 FBtr0306320 CR43258 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_475 chr2L 7374715 7374769 + 20 NA intron (FBgn0031903, intron 3 of 5) protein_coding-intron (FBgn0031903, intron 3 of 5) -2994 FBgn0002938 FBgn0002938 FBtr0079437 ninaC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2629 chr2R 12169890 12170000 + 20 NA promoter-TSS (FBgn0034106) protein_coding-promoter-TSS (FBgn0034106) 506 FBgn0034105 FBgn0034105 FBtr0087182 CG7755 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5888 chr3R 19801328 19801382 + 20 NA exon (FBgn0051140, exon 8 of 17) protein_coding-exon (FBgn0051140, exon 8 of 17) -7870 FBgn0051451 FBgn0051451 FBtr0308922 CR31451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4173 chr3L 15846763 15846823 + 20 NA intron (FBgn0036542, intron 13 of 15) protein_coding-intron (FBgn0036542, intron 12 of 14) 2684 FBgn0036541 FBgn0036541 FBtr0075533 CG12486 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1490 chr2L 19929262 19929349 + 20 NA exon (FBgn0263873, exon 12 of 16) protein_coding-exon (FBgn0263873, exon 12 of 16) 6304 FBgn0264375 FBgn0264375 FBtr0332241 CR43827 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5889 chr3R 19801938 19802049 + 20 NA exon (FBgn0051140, exon 9 of 17) protein_coding-exon (FBgn0051140, exon 9 of 17) -7232 FBgn0051451 FBgn0051451 FBtr0308922 CR31451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4345 chr3L 18113117 18113171 + 20 NA TTS (FBgn0052195) protein_coding-TTS (FBgn0052195) 1945 FBgn0262100 FBgn0262100 FBtr0304019 CG42853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5155 chr3R 8896311 8896365 + 20 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 12857 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5240 chr3R 10440563 10440674 + 20 NA intron (FBgn0038246, intron 1 of 6) protein_coding-intron (FBgn0038246, intron 1 of 6) 5254 FBgn0038246 FBgn0038246 FBtr0082961 CG14853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_846 chr2L 12992069 12992145 + 20 NA Intergenic Intergenic 8524 FBgn0032465 FBgn0032465 FBtr0080430 CG12404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4461 chr3L 22840806 22840951 + 20 NA promoter-TSS (FBgn0052460) tRNA-promoter-TSS (FBgn0052460) 18 FBgn0052460 FBgn0052460 FBtr0078580 tRNA:CR32460 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2048 chr2R 3186147 3186244 + 20 NA exon (FBgn0003174, exon 5 of 9) protein_coding-exon (FBgn0003174, exon 5 of 9) -12718 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6022 chr3R 22482800 22482909 + 20 NA exon (FBgn0243586, exon 2 of 2) protein_coding-exon (FBgn0243586, exon 2 of 2) 686 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4019 chr3L 13093657 13093791 + 20 NA Intergenic Intergenic -10655 FBgn0036346 FBgn0036346 FBtr0075891 CG11251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4470 chr3L 23339485 23339545 + 20 NA TTS (FBgn0052230) protein_coding-TTS (FBgn0052230) 7089 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5783 chr3R 17264406 17264519 + 20 NA Intergenic Intergenic -4607 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6435 chr3R 26754872 26754957 + 20 NA exon (FBgn0020912, exon 5 of 5) protein_coding-exon (FBgn0020912, exon 5 of 5) 7315 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4153 chr3L 15411961 15412075 + 20 NA Intergenic Intergenic 11086 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3771 chr3L 8361494 8361614 + 20 NA Intergenic Intergenic -3951 FBgn0001253 FBgn0001253 FBtr0076607 ImpE1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6440 chr3R 26780890 26780944 + 20 NA Intergenic Intergenic -4612 FBgn0039812 FBgn0039812 FBtr0085731 CG15548 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6615 chr4 557875 557982 + 20 NA exon (FBgn0004607, exon 12 of 14) protein_coding-exon (FBgn0004607, exon 12 of 14) 20552 FBgn0264618 FBgn0264618 FBtr0333707 CR43958 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2764 chr2R 14453017 14453091 + 20 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 25964 FBgn0085419 FBgn0085419 FBtr0112633 Rgk2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4347 chr3L 18146394 18146487 + 20 NA exon (FBgn0036780, exon 3 of 3) protein_coding-exon (FBgn0036780, exon 3 of 3) 4417 FBgn0036780 FBgn0036780 FBtr0075127 CG7330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5560 chr3R 14374556 14374623 + 20 NA Intergenic Intergenic -3281 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3060 chr2R 19657860 19657919 + 20 NA intron (FBgn0034903, intron 4 of 13) protein_coding-intron (FBgn0034903, intron 4 of 13) 17625 FBgn0034902 FBgn0034902 FBtr0072091 CG5532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5862 chr3R 19095121 19095207 + 20 NA exon (FBgn0004882, exon 4 of 10) protein_coding-exon (FBgn0004882, exon 4 of 10) 868 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_419 chr2L 6310560 6310614 + 20 NA intron (FBgn0053531, intron 15 of 17) protein_coding-intron (FBgn0053531, intron 15 of 17) 1768 FBgn0260452 FBgn0260452 FBtr0079247 CG13984 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2123 chr2R 4270901 4270982 + 20 NA intron (FBgn0261588, intron 2 of 10) protein_coding-intron (FBgn0261588, intron 2 of 10) 12363 FBgn0033287 FBgn0033287 FBtr0088740 CG8701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3391 chr2RHet 3066537 3066591 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6151 chr3R 23839819 23839873 + 20 NA Intergenic Intergenic -12488 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_149 chr2L 1855776 1855871 + 20 NA intron (FBgn0051665, intron 12 of 12) protein_coding-intron (FBgn0051665, intron 12 of 12) -14044 FBgn0031372 FBgn0031372 FBtr0077891 CG7295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5665 chr3R 15753902 15753980 + 20 NA exon (FBgn0038753, exon 1 of 4) protein_coding-exon (FBgn0038753, exon 1 of 4) 425 FBgn0038753 FBgn0038753 FBtr0083849 CG4459 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4142 chr3L 15269833 15269924 + 20 NA Intergenic Intergenic -22180 FBgn0036491 FBgn0036491 FBtr0113172 Best4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4468 chr3L 23304077 23304131 + 20 NA Intergenic Intergenic 27096 FBgn0010215 FBgn0010215 FBtr0070038 alpha-Cat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3446 chr3L 918206 918280 + 20 NA intron (FBgn0264574, intron 2 of 14) protein_coding-intron (FBgn0264574, intron 2 of 12) 9131 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4815 chr3R 3627640 3627710 + 20 NA TTS (FBgn0037520) protein_coding-TTS (FBgn0037520) 225 FBgn0037519 FBgn0037519 FBtr0081773 CG3014 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2345 chr2R 7635128 7635182 + 20 NA Intergenic Intergenic -20803 FBgn0033650 FBgn0033650 FBtr0088029 CG13193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4008 chr3L 12946553 12946637 + 20 NA exon (FBgn0036325, exon 2 of 2) protein_coding-exon (FBgn0036325, exon 2 of 2) 1152 FBgn0036325 FBgn0036325 FBtr0075903 CG10752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_909 chr2L 14133900 14133954 + 20 NA promoter-TSS (FBgn0028906) protein_coding-promoter-TSS (FBgn0028906) -564 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1872 chr2L 22890986 22891071 + 20 NA Intergenic Intergenic 16494 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2630 chr2R 12248129 12248187 + 20 NA promoter-TSS (FBgn0034121) protein_coding-promoter-TSS (FBgn0034121) -973 FBgn0034121 FBgn0034121 FBtr0087153 CG6262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_165 chr2L 2074329 2074383 + 20 NA intron (FBgn0053516, intron 2 of 7) protein_coding-intron (FBgn0053516, intron 2 of 7) -5621 FBgn0031388 FBgn0031388 FBtr0077827 CG12674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_917 chr2L 14276861 14276999 + 20 NA promoter-TSS (FBgn0052971) protein_coding-promoter-TSS (FBgn0052971) 2135 FBgn0052971 FBgn0052971 FBtr0080621 CG32971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2847 chr2R 15913026 15913080 + 20 NA Intergenic Intergenic -20561 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6570 chr3RHet 1464195 1464249 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6297 chr3R 25207983 25208124 + 20 NA intron (FBgn0004369, intron 1 of 18) protein_coding-intron (FBgn0004369, intron 1 of 18) -62717 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_647 chr2L 9769884 9769981 + 20 NA TTS (FBgn0032145) protein_coding-TTS (FBgn0032145) 865 FBgn0032144 FBgn0032144 FBtr0079868 CG17633 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4365 chr3L 18655738 18655821 + 20 NA exon (FBgn0036801, exon 4 of 9) protein_coding-exon (FBgn0036801, exon 4 of 9) -4682 FBgn0260027 FBgn0260027 FBtr0300582 CG42495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5809 chr3R 17721372 17721430 + 20 NA intron (FBgn0038917, intron 4 of 4) protein_coding-intron (FBgn0038917, intron 4 of 4) 6140 FBgn0264426 FBgn0264426 FBtr0332545 CR43844 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_616 chr2L 9008952 9009018 + 20 NA Intergenic Intergenic -1601 FBgn0032087 FBgn0032087 FBtr0079765 CG9568 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6695 chrU 85286 85367 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6598 chr4 143652 143729 + 20 NA exon (FBgn0011747, exon 4 of 11) protein_coding-exon (FBgn0011747, exon 4 of 11) 6388 FBgn0011747 FBgn0011747 FBtr0089173 Ank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2342 chr2R 7571335 7571389 + 20 NA TTS (FBgn0033645) protein_coding-TTS (FBgn0033645) 2575 FBgn0033645 FBgn0033645 FBtr0088084 CG13196 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5377 chr3R 12340268 12340341 + 20 NA intron (FBgn0259244, intron 2 of 15) protein_coding-intron (FBgn0259244, intron 2 of 16) 11781 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2126 chr2R 4351688 4351763 + 20 NA promoter-TSS (FBgn0050360) protein_coding-promoter-TSS (FBgn0050360) -950 FBgn0050360 FBgn0050360 FBtr0273322 Mal-A6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7210 chrX 16041692 16041746 + 20 NA exon (FBgn0042650, exon 1 of 4) protein_coding-exon (FBgn0042650, exon 1 of 4) -23354 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1520 chr2L 20256218 20256279 + 20 NA exon (FBgn0259998, exon 1 of 1) protein_coding-exon (FBgn0259998, exon 1 of 1) 787 FBgn0259998 FBgn0259998 FBtr0081376 CG17571 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1146 chr2L 16083774 16083872 + 20 NA Intergenic Intergenic -11186 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2286 chr2R 6795062 6795116 + 20 NA Intergenic Intergenic -2339 FBgn0033573 FBgn0033573 FBtr0088200 Obp47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6258 chr3R 24615604 24615658 + 20 NA promoter-TSS (FBgn0039599) protein_coding-promoter-TSS (FBgn0039599) 292 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5972 chr3R 22029610 22029700 + 20 NA Intergenic Intergenic -12728 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6678 chrU 28637 28691 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1471 chr2L 19729846 19729963 + 20 NA exon (FBgn0000464, exon 16 of 17) protein_coding-exon (FBgn0000464, exon 16 of 17) 5816 FBgn0032815 FBgn0032815 FBtr0331244 CG10462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1537 chr2L 20484749 20484874 + 20 NA Intergenic Intergenic -2685 FBgn0262455 FBgn0262455 FBtr0304488 mir-1 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4231 chr3L 16732200 16732272 + 20 NA exon (FBgn0036659, exon 4 of 4) protein_coding-exon (FBgn0036659, exon 4 of 4) 5590 FBgn0036659 FBgn0036659 FBtr0075321 CG9701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4206 chr3L 16270838 16270972 + 20 NA TTS (FBgn0036591) protein_coding-TTS (FBgn0036591) 370 FBgn0036590 FBgn0036590 FBtr0075468 CG13065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_667 chr2L 10114475 10114547 + 20 NA intron (FBgn0083945, intron 8 of 12) protein_coding-intron (FBgn0083945, intron 8 of 12) 8260 FBgn0032184 FBgn0032184 FBtr0079966 CG13135 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2113 chr2R 4205392 4205460 + 20 NA Intergenic Intergenic -9579 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2055 chr2R 3228198 3228300 + 20 NA exon (FBgn0033159, exon 9 of 24) protein_coding-exon (FBgn0033159, exon 9 of 24) 29336 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_206 chr2L 3083026 3083080 + 20 NA intron (FBgn0015600, intron 4 of 8) protein_coding-intron (FBgn0015600, intron 6 of 10) 24591 FBgn0027571 FBgn0027571 FBtr0290093 CG3523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5117 chr3R 8464462 8464516 + 20 NA TTS (FBgn0038068) protein_coding-TTS (FBgn0038068) 286 FBgn0038069 FBgn0038069 FBtr0303841 CG11608 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3364 chr2RHet 2274006 2274068 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5558 chr3R 14371358 14371445 + 20 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) -93 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1177 chr2L 16422734 16422864 + 20 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -4915 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_32 chr2L 753135 753229 + 20 NA exon (FBgn0031275, exon 1 of 10) protein_coding-exon (FBgn0031275, exon 1 of 10) 2573 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3697 chr3L 6941389 6941455 + 20 NA exon (FBgn0035719, exon 6 of 6) protein_coding-exon (FBgn0035719, exon 6 of 6) 5466 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3328 chr2RHet 2129352 2129406 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6383 chr3R 25745977 25746031 + 20 NA promoter-TSS (FBgn0003861) protein_coding-promoter-TSS (FBgn0003861) 7 FBgn0003861 FBgn0003861 FBtr0331356 trp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_805 chr2L 12630910 12630981 + 20 NA intron (FBgn0032439, intron 2 of 2) protein_coding-intron (FBgn0032439, intron 2 of 2) 12597 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5603 chr3R 15031557 15031666 + 20 NA Intergenic Intergenic -6304 FBgn0025680 FBgn0025680 FBtr0083736 cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5118 chr3R 8464610 8464664 + 20 NA exon (FBgn0038069, exon 3 of 4) protein_coding-exon (FBgn0038069, exon 3 of 4) 434 FBgn0038069 FBgn0038069 FBtr0303841 CG11608 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5681 chr3R 15905189 15905243 + 20 NA Intergenic Intergenic 2956 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1813 chr2L 22529438 22529495 + 20 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 56984 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3454 chr3L 1106983 1107037 + 20 NA Intergenic Intergenic -5921 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4054 chr3L 13733995 13734063 + 20 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 62471 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1369 chr2L 18345860 18345914 + 20 NA intron (FBgn0000636, intron 1 of 6) protein_coding-intron (FBgn0000636, intron 1 of 7) 13139 FBgn0011559 FBgn0011559 FBtr0081054 Acp36DE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6638 chr4 939950 940110 + 20 NA exon (FBgn0023213, exon 8 of 16) protein_coding-exon (FBgn0023213, exon 8 of 16) 11317 FBgn0023213 FBgn0023213 FBtr0289951 eIF4G protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3131 chr2R 21102871 21102940 + 20 NA intron (FBgn0035094, intron 2 of 8) protein_coding-intron (FBgn0035094, intron 2 of 8) -11229 FBgn0001325 FBgn0001325 FBtr0072449 Kr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3120 chr2R 20802100 20802181 + 20 NA exon (FBgn0085434, exon 22 of 27) protein_coding-exon (FBgn0085434, exon 22 of 27) 8979 FBgn0060296 FBgn0060296 FBtr0333814 pain protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4307 chr3L 17590669 17590732 + 20 NA exon (FBgn0000567, exon 5 of 8) protein_coding-exon (FBgn0000567, exon 5 of 8) 21725 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2795 chr2R 15142991 15143046 + 20 NA Intergenic Intergenic -2328 FBgn0053453 FBgn0053453 FBtr0086564 CG33453 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4490 chr3L 23658906 23658960 + 20 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -49458 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4887 chr3R 4513001 4513055 + 20 NA Intergenic Intergenic -7272 FBgn0053325 FBgn0053325 FBtr0307515 CG33325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5964 chr3R 21972861 21972928 + 20 NA Intergenic Intergenic 14018 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2216 chr2R 5658162 5658239 + 20 NA intron (FBgn0027589, intron 7 of 8) protein_coding-intron (FBgn0027589, intron 7 of 8) -12627 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6724 chrU 236961 237027 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1425 chr2L 19240456 19240517 + 20 NA Intergenic Intergenic 22407 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3682 chr3L 6794590 6794644 + 20 NA Intergenic Intergenic 11359 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1585 chr2L 20845922 20845993 + 20 NA intron (FBgn0051676, intron 2 of 2) protein_coding-intron (FBgn0051676, intron 2 of 2) -3400 FBgn0032894 FBgn0032894 FBtr0081425 CG14402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6134 chr3R 23670266 23670349 + 20 NA promoter-TSS (FBgn0067407) pseudogene-promoter-TSS (FBgn0067407) -504 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1133 chr2L 15994905 15994984 + 20 NA Intergenic Intergenic 5188 FBgn0263331 FBgn0263331 FBtr0308754 CR43412 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5643 chr3R 15542437 15542491 + 20 NA promoter-TSS (FBgn0085315) protein_coding-promoter-TSS (FBgn0085315) -815 FBgn0085315 FBgn0085315 FBtr0112482 CG34286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_796 chr2L 12551583 12551669 + 20 NA Intergenic Intergenic 8450 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6531 chr3R 27793753 27793812 + 20 NA intron (FBgn0011224, intron 2 of 13) protein_coding-intron (FBgn0011224, intron 3 of 13) 13109 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1951 chr2R 825675 825732 + 20 NA Intergenic Intergenic -11469 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4258 chr3L 17102520 17102621 + 20 NA intron (FBgn0260943, intron 7 of 14) protein_coding-intron (FBgn0260943, intron 7 of 14) 53857 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3523 chr3L 2702630 2702704 + 20 NA intron (FBgn0264606, intron 1 of 16) protein_coding-intron (FBgn0264606, intron 1 of 17) 9023 FBgn0264606 FBgn0264606 FBtr0333631 CG43955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1058 chr2L 15211532 15211586 + 20 NA Intergenic Intergenic -3663 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6748 chrU 955023 955092 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3213 chr2RHet 932246 932309 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6421 chr3R 26689347 26689401 + 20 NA Intergenic Intergenic -3871 FBgn0039805 FBgn0039805 FBtr0085710 Cpr100A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_535 chr2L 8614773 8614832 + 20 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -5226 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_659 chr2L 9984843 9984934 + 20 NA promoter-TSS (FBgn0040965) protein_coding-promoter-TSS (FBgn0040965) -145 FBgn0040965 FBgn0040965 FBtr0079974 CG13130 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5253 chr3R 10791121 10791175 + 20 NA Intergenic Intergenic 46746 FBgn0038279 FBgn0038279 FBtr0083004 CG3837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4132 chr3L 15048442 15048533 + 20 NA exon (FBgn0036470, exon 1 of 1) protein_coding-exon (FBgn0036470, exon 1 of 1) 610 FBgn0036470 FBgn0036470 FBtr0075631 CG13463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3153 chr2RHet 142405 142465 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6639 chr4 940663 940717 + 20 NA exon (FBgn0023213, exon 8 of 16) protein_coding-exon (FBgn0023213, exon 8 of 16) 10657 FBgn0023213 FBgn0023213 FBtr0289951 eIF4G protein_coding Nup98-S2-pascual-garcia2017_R1_peak_314 chr2L 4524423 4524533 + 20 NA exon (FBgn0053196, exon 29 of 47) protein_coding-exon (FBgn0053196, exon 29 of 47) -47454 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3375 chr2RHet 2356901 2356962 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5133 chr3R 8644390 8644578 + 20 NA Intergenic Intergenic -1733 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4361 chr3L 18461871 18461963 + 20 NA TTS (FBgn0028415) protein_coding-TTS (FBgn0028415) 801 FBgn0028415 FBgn0028415 FBtr0075116 Met75Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1621 chr2L 21368323 21368410 + 20 NA intron (FBgn0041245, intron 1 of 2) protein_coding-intron (FBgn0041245, intron 1 of 2) 1340 FBgn0041245 FBgn0041245 FBtr0081522 Gr39b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5238 chr3R 10353286 10353364 + 20 NA intron (FBgn0038237, intron 3 of 13) protein_coding-intron (FBgn0038237, intron 3 of 13) 6554 FBgn0038236 FBgn0038236 FBtr0082954 Cyp313a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7059 chrX 5454845 5454929 + 20 NA promoter-TSS (FBgn0263512) protein_coding-promoter-TSS (FBgn0263512) -671 FBgn0263512 FBgn0263512 FBtr0100024 Vsx2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_905 chr2L 14097336 14097399 + 20 NA Intergenic Intergenic -7116 FBgn0028904 FBgn0028904 FBtr0080596 CG16879 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3957 chr3L 12191704 12191771 + 20 NA exon (FBgn0036264, exon 1 of 1) protein_coding-exon (FBgn0036264, exon 1 of 1) 846 FBgn0036264 FBgn0036264 FBtr0076005 CG11529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6087 chr3R 23220848 23220905 + 20 NA intron (FBgn0016061, intron 8 of 16) protein_coding-intron (FBgn0016061, intron 8 of 16) -25289 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3220 chr2RHet 1285490 1285544 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4015 chr3L 13073412 13073498 + 20 NA TTS (FBgn0263661) ncRNA-TTS (FBgn0263661) 2297 FBgn0263661 FBgn0263661 FBtr0310106 CR43652 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1942 chr2R 683841 683944 + 20 NA Intergenic Intergenic -7745 FBgn0250830 FBgn0250830 FBtr0111273 CG12547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1681 chr2L 21859708 21859776 + 20 NA Intergenic Intergenic 31149 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3305 chr2RHet 1944602 1944678 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_150 chr2L 1862294 1862375 + 20 NA intron (FBgn0051663, intron 10 of 10) protein_coding-intron (FBgn0051663, intron 11 of 11) -7533 FBgn0031372 FBgn0031372 FBtr0077891 CG7295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6110 chr3R 23473684 23473738 + 20 NA exon (FBgn0051058, exon 3 of 3) protein_coding-exon (FBgn0051058, exon 3 of 3) 2723 FBgn0051058 FBgn0051058 FBtr0085198 CG31058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2961 chr2R 18113611 18113708 + 20 NA exon (FBgn0034716, exon 4 of 7) protein_coding-exon (FBgn0034716, exon 4 of 7) 2065 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2783 chr2R 14908350 14908404 + 20 NA Intergenic Intergenic -9137 FBgn0263083 FBgn0263083 FBtr0307099 CG43351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3740 chr3L 7609224 7609309 + 20 NA exon (FBgn0035802, exon 2 of 15) protein_coding-exon (FBgn0035802, exon 2 of 15) 18936 FBgn0035802 FBgn0035802 FBtr0089851 CG33275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4748 chr3R 2691635 2691777 + 20 NA exon (FBgn0001077, exon 2 of 2) protein_coding-exon (FBgn0001077, exon 2 of 2) 1660 FBgn0001077 FBgn0001077 FBtr0081625 ftz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1878 chr2L 22900881 22900962 + 20 NA intron (FBgn0250907, intron 5 of 8) protein_coding-intron (FBgn0250907, intron 5 of 8) 17639 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5780 chr3R 17259551 17259651 + 20 NA exon (FBgn0008651, exon 1 of 3) protein_coding-exon (FBgn0008651, exon 1 of 3) 254 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_300 chr2L 4430077 4430177 + 20 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -3781 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6174 chr3R 24018525 24018579 + 20 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 45950 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2174 chr2R 4910571 4910625 + 20 NA exon (FBgn0033365, exon 3 of 9) protein_coding-exon (FBgn0033365, exon 3 of 9) 5238 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1748 chr2L 22083443 22083497 + 20 NA Intergenic Intergenic 3798 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_712 chr2L 11139070 11139141 + 20 NA TTS (FBgn0040211) protein_coding-TTS (FBgn0040211) 2710 FBgn0040211 FBgn0040211 FBtr0080201 hgo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3143 chr2RHet 73656 73710 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_401 chr2L 5854876 5854983 + 20 NA intron (FBgn0085410, intron 8 of 9) protein_coding-intron (FBgn0085410, intron 8 of 9) 24552 FBgn0031745 FBgn0031745 FBtr0079158 CG8965 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5994 chr3R 22191770 22191824 + 20 NA Intergenic Intergenic 10587 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2280 chr2R 6627356 6627430 + 20 NA promoter-TSS (FBgn0024956) protein_coding-promoter-TSS (FBgn0024956) -54 FBgn0024956 FBgn0024956 FBtr0088255 Mat1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1029 chr2L 14942982 14943036 + 20 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 18274 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1254 chr2L 17212264 17212356 + 20 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -27049 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2798 chr2R 15155024 15155078 + 20 NA Intergenic Intergenic 7637 FBgn0034423 FBgn0034423 FBtr0086511 CG7229 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6399 chr3R 26239126 26239213 + 20 NA Intergenic Intergenic 9524 FBgn0261704 FBgn0261704 FBtr0303202 CG42740 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5995 chr3R 22193975 22194029 + 20 NA Intergenic Intergenic 12792 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3593 chr3L 4638645 4638700 + 20 NA intron (FBgn0262870, intron 20 of 20) protein_coding-intron (FBgn0262870, intron 20 of 20) -3883 FBgn0035563 FBgn0035563 FBtr0073319 CG13716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2796 chr2R 15143097 15143204 + 20 NA Intergenic Intergenic -2460 FBgn0053453 FBgn0053453 FBtr0086564 CG33453 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5695 chr3R 16020949 16021060 + 20 NA Intergenic Intergenic -9527 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2479 chr2R 9625085 9625203 + 20 NA intron (FBgn0000633, intron 11 of 12) protein_coding-intron (FBgn0000633, intron 11 of 12) -17705 FBgn0033866 FBgn0033866 FBtr0087628 CG6280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_511 chr2L 8482108 8482175 + 20 NA promoter-TSS (FBgn0051892) tRNA-promoter-TSS (FBgn0051892) 14 FBgn0051892 FBgn0051892 FBtr0079702 tRNA:CR31892 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1614 chr2L 21285549 21285603 + 20 NA TTS (FBgn0032940) protein_coding-TTS (FBgn0032940) -1303 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_366 chr2L 5445670 5445731 + 20 NA Intergenic Intergenic -6423 FBgn0051647 FBgn0051647 FBtr0308924 CR31647 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4518 chr3L 23962132 23962260 + 20 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 17314 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_808 chr2L 12655838 12655906 + 20 NA Intergenic Intergenic -9516 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4766 chr3R 2843650 2843736 + 20 NA Intergenic Intergenic -34364 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1273 chr2L 17351780 17351866 + 20 NA Intergenic Intergenic 2845 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2074 chr2R 3441415 3441476 + 20 NA intron (FBgn0033192, intron 1 of 13) protein_coding-intron (FBgn0033192, intron 1 of 13) 8278 FBgn0033192 FBgn0033192 FBtr0088909 Corin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2129 chr2R 4376379 4376491 + 20 NA intron (FBgn0050361, intron 4 of 18) protein_coding-intron (FBgn0050361, intron 4 of 18) 16947 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6799 chrU 2312551 2312645 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5068 chr3R 7594384 7594458 + 20 NA TTS (FBgn0086910) protein_coding-TTS (FBgn0086910) -8621 FBgn0017581 FBgn0017581 FBtr0082535 Lk6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6071 chr3R 23130747 23130801 + 20 NA intron (FBgn0039510, intron 22 of 30) protein_coding-intron (FBgn0039510, intron 23 of 31) -12863 FBgn0040609 FBgn0040609 FBtr0085172 CG3348 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5824 chr3R 18117436 18117490 + 20 NA intron (FBgn0051163, intron 15 of 18) protein_coding-intron (FBgn0051163, intron 15 of 18) -1185 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6011 chr3R 22405563 22405617 + 20 NA intron (FBgn0263289, intron 16 of 24) protein_coding-intron (FBgn0263289, intron 16 of 22) -39255 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6091 chr3R 23260163 23260236 + 20 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 3005 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2919 chr2R 17249902 17249982 + 20 NA intron (FBgn0000395, intron 3 of 6) protein_coding-intron (FBgn0000395, intron 3 of 6) -11593 FBgn0034624 FBgn0034624 FBtr0071611 CG17974 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_568 chr2L 8778338 8778473 + 20 NA exon (FBgn0032069, exon 5 of 5) protein_coding-exon (FBgn0032069, exon 5 of 5) -2148 FBgn0032068 FBgn0032068 FBtr0079742 CG9466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1096 chr2L 15542547 15542636 + 20 NA Intergenic Intergenic -4928 FBgn0259922 FBgn0259922 FBtr0300217 CG42448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1303 chr2L 17746049 17746103 + 20 NA intron (FBgn0015609, intron 3 of 23) protein_coding-intron (FBgn0015609, intron 1 of 21) 6270 FBgn0015609 FBgn0015609 FBtr0100316 CadN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1718 chr2L 22008815 22008886 + 20 NA Intergenic Intergenic -6381 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_57 chr2L 963947 964005 + 20 NA Intergenic Intergenic 41183 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4800 chr3R 3213416 3213470 + 20 NA Intergenic Intergenic -3761 FBgn0261502 FBgn0261502 FBtr0302394 CG42650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5241 chr3R 10464697 10464751 + 20 NA exon (FBgn0038247, exon 5 of 10) protein_coding-exon (FBgn0038247, exon 5 of 10) 3561 FBgn0038248 FBgn0038248 FBtr0082976 CG7886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6648 chr4 998156 998210 + 20 NA TTS (FBgn0083990) ncRNA-TTS (FBgn0083990) 2389 FBgn0083990 FBgn0083990 FBtr0111046 sphinx ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6023 chr3R 22483557 22483611 + 20 NA TTS (FBgn0243586) protein_coding-TTS (FBgn0243586) 1416 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3600 chr3L 4965769 4965823 + 20 NA intron (FBgn0005775, intron 4 of 7) protein_coding-intron (FBgn0005775, intron 1 of 4) 14973 FBgn0035584 FBgn0035584 FBtr0073374 CG17030 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4772 chr3R 2955565 2955662 + 20 NA promoter-TSS (FBgn0051494) tRNA-promoter-TSS (FBgn0051494) 27 FBgn0051494 FBgn0051494 FBtr0081565 tRNA:CR31494 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5842 chr3R 18666306 18666366 + 20 NA Intergenic Intergenic 4698 FBgn0039029 FBgn0039029 FBtr0084314 CG4704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5608 chr3R 15092941 15093025 + 20 NA Intergenic Intergenic 9995 FBgn0038695 FBgn0038695 FBtr0083738 CG14280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6384 chr3R 25784939 25785031 + 20 NA intron (FBgn0004622, intron 2 of 9) protein_coding-intron (FBgn0004622, intron 2 of 9) 10184 FBgn0004622 FBgn0004622 FBtr0330298 Takr99D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5132 chr3R 8642732 8642786 + 20 NA promoter-TSS (FBgn0051345) protein_coding-promoter-TSS (FBgn0051345) -8 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2374 chr2R 8011840 8011903 + 20 NA Intergenic Intergenic -5026 FBgn0086677 FBgn0086677 FBtr0088021 jeb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3534 chr3L 2951070 2951169 + 20 NA exon (FBgn0052846, exon 2 of 2) protein_coding-exon (FBgn0052846, exon 2 of 2) 499 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5684 chr3R 15951032 15951098 + 20 NA Intergenic Intergenic 4283 FBgn0045471 FBgn0045471 FBtr0083865 Gr92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3717 chr3L 7086685 7086751 + 20 NA exon (FBgn0035737, exon 2 of 2) protein_coding-exon (FBgn0035737, exon 2 of 2) 414 FBgn0035737 FBgn0035737 FBtr0076909 Cpr65Ec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6317 chr3R 25386642 25386696 + 20 NA intron (FBgn0000492, intron 1 of 1) protein_coding-intron (FBgn0000492, intron 1 of 1) 4560 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_147 chr2L 1825649 1825743 + 20 NA exon (FBgn0051664, exon 3 of 5) protein_coding-exon (FBgn0051664, exon 3 of 5) 682 FBgn0051664 FBgn0051664 FBtr0303377 CG31664 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2977 chr2R 18226836 18226890 + 20 NA exon (FBgn0034720, exon 9 of 14) protein_coding-exon (FBgn0034720, exon 9 of 14) 6232 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6780 chrU 1663365 1663461 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5367 chr3R 12249103 12249309 + 20 NA Intergenic Intergenic 1576 FBgn0051497 FBgn0051497 FBtr0083317 tRNA:CR31497 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1302 chr2L 17723261 17723324 + 20 NA intron (FBgn0015609, intron 2 of 22) protein_coding-intron (FBgn0015609, intron 2 of 21) 18611 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_915 chr2L 14250114 14250168 + 20 NA Intergenic Intergenic -12886 FBgn0261563 FBgn0261563 FBtr0302735 wb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5095 chr3R 8101950 8102009 + 20 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) 3131 FBgn0259975 FBgn0259975 FBtr0300319 Sfp87B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6141 chr3R 23731638 23731692 + 20 NA promoter-TSS (FBgn0085382) protein_coding-promoter-TSS (FBgn0085382) -100 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2176 chr2R 4948560 4948614 + 20 NA exon (FBgn0033369, exon 2 of 2) protein_coding-exon (FBgn0033369, exon 2 of 2) 842 FBgn0033369 FBgn0033369 FBtr0088661 CG8197 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6154 chr3R 23864240 23864294 + 20 NA intron (FBgn0085391, intron 2 of 9) protein_coding-intron (FBgn0085391, intron 2 of 9) 11933 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6025 chr3R 22491421 22491483 + 20 NA intron (FBgn0250908, intron 2 of 8) protein_coding-intron (FBgn0250908, intron 2 of 8) 9284 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5605 chr3R 15064549 15064624 + 20 NA exon (FBgn0038693, exon 15 of 28) protein_coding-exon (FBgn0038693, exon 15 of 28) 7265 FBgn0038693 FBgn0038693 FBtr0301694 unc79 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5342 chr3R 11955063 11955157 + 20 NA intron (FBgn0003319, intron 1 of 10) protein_coding-intron (FBgn0003319, intron 1 of 10) 659 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4723 chr3R 2503958 2504057 + 20 NA exon (FBgn0002522, exon 1 of 3) protein_coding-exon (FBgn0002522, exon 1 of 3) -6165 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1290 chr2L 17606074 17606128 + 20 NA Intergenic Intergenic 11436 FBgn0261089 FBgn0261089 FBtr0303255 Sytalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1771 chr2L 22223193 22223301 + 20 NA Intergenic Intergenic -2904 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1863 chr2L 22712538 22712592 + 20 NA Intergenic Intergenic -21557 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_190 chr2L 2692401 2692455 + 20 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) 4009 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1375 chr2L 18415738 18415815 + 20 NA Intergenic Intergenic 27452 FBgn0261597 FBgn0261597 FBtr0081090 RpS26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5139 chr3R 8688123 8688177 + 20 NA Intergenic Intergenic -3211 FBgn0038088 FBgn0038088 FBtr0082686 CG10126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1364 chr2L 18288271 18288325 + 20 NA Intergenic Intergenic -2614 FBgn0051787 FBgn0051787 FBtr0081055 CG31787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2312 chr2R 7357302 7357395 + 20 NA Intergenic Intergenic -5862 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1677 chr2L 21842445 21842541 + 20 NA Intergenic Intergenic 13900 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4107 chr3L 14522958 14523020 + 20 NA intron (FBgn0087007, intron 2 of 8) protein_coding-intron (FBgn0087007, intron 2 of 8) 6387 FBgn0087007 FBgn0087007 FBtr0273426 bbg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_598 chr2L 8871629 8871724 + 20 NA Intergenic Intergenic 4909 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2759 chr2R 14383023 14383077 + 20 NA intron (FBgn0028496, intron 2 of 18) protein_coding-intron (FBgn0028496, intron 2 of 18) 2446 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_682 chr2L 10603998 10604052 + 20 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -22363 FBgn0085190 FBgn0085190 FBtr0112352 CG34161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4862 chr3R 4283178 4283232 + 20 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 20110 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1240 chr2L 17109367 17109427 + 20 NA Intergenic Intergenic 16564 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1451 chr2L 19597929 19597983 + 20 NA intron (FBgn0000464, intron 1 of 17) protein_coding-intron (FBgn0000464, intron 1 of 17) 11333 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4913 chr3R 5126332 5126391 + 20 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -21131 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_736 chr2L 11469881 11469935 + 20 NA Intergenic Intergenic -14799 FBgn0263087 FBgn0263087 FBtr0307103 CG43355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_778 chr2L 12184343 12184405 + 20 NA intron (FBgn0000114, intron 1 of 8) protein_coding-intron (FBgn0000114, intron 1 of 8) -6622 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3667 chr3L 6470759 6470869 + 20 NA intron (FBgn0261801, intron 4 of 6) protein_coding-intron (FBgn0261801, intron 4 of 6) 10710 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2034 chr2R 2795600 2795654 + 20 NA intron (FBgn0050158, intron 3 of 7) protein_coding-intron (FBgn0050158, intron 3 of 7) -15324 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3693 chr3L 6939371 6939425 + 20 NA exon (FBgn0035719, exon 2 of 6) protein_coding-exon (FBgn0035719, exon 2 of 6) 3442 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_450 chr2L 6896687 6896751 + 20 NA promoter-TSS (FBgn0031866) protein_coding-promoter-TSS (FBgn0031866) -5358 FBgn0262205 FBgn0262205 FBtr0304244 mir-932 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3772 chr3L 8362769 8362843 + 20 NA Intergenic Intergenic -2699 FBgn0001253 FBgn0001253 FBtr0076607 ImpE1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2362 chr2R 7812055 7812125 + 20 NA Intergenic Intergenic -11810 FBgn0033667 FBgn0033667 FBtr0088054 CG13183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1338 chr2L 18022612 18022666 + 20 NA intron (FBgn0243486, intron 1 of 14) protein_coding-intron (FBgn0243486, intron 1 of 14) 10232 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3959 chr3L 12234345 12234443 + 20 NA intron (FBgn0260941, intron 2 of 11) protein_coding-intron (FBgn0260941, intron 2 of 9) 4754 FBgn0264723 FBgn0264723 FBtr0334104 CG43991 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_197 chr2L 2830135 2830253 + 20 NA promoter-TSS (FBgn0031464) protein_coding-promoter-TSS (FBgn0031464) 42 FBgn0031464 FBgn0031464 FBtr0300382 Duox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2940 chr2R 17471482 17471565 + 19 NA exon (FBgn0050222, exon 3 of 6) protein_coding-exon (FBgn0050222, exon 3 of 6) 526 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4948 chr3R 5807427 5807481 + 19 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 4328 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_387 chr2L 5724035 5724128 + 19 NA promoter-TSS (FBgn0031736) protein_coding-promoter-TSS (FBgn0031736) -575 FBgn0031736 FBgn0031736 FBtr0079135 CG11030 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_83 chr2L 1215881 1215935 + 19 NA TTS (FBgn0262944) ncRNA-TTS (FBgn0262944) 1877 FBgn0262944 FBgn0262944 FBtr0306546 CR43263 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4999 chr3R 6518344 6518398 + 19 NA exon (FBgn0262717, exon 5 of 8) protein_coding-exon (FBgn0262717, exon 5 of 8) -3998 FBgn0037822 FBgn0037822 FBtr0082267 CG14683 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2766 chr2R 14540427 14540553 + 19 NA promoter-TSS (FBgn0034371) protein_coding-promoter-TSS (FBgn0034371) -211 FBgn0034371 FBgn0034371 FBtr0086658 SP2637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5246 chr3R 10634151 10634214 + 19 NA exon (FBgn0053555, exon 8 of 12) protein_coding-exon (FBgn0053555, exon 8 of 12) 6687 FBgn0038262 FBgn0038262 FBtr0082993 CG14857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1673 chr2L 21834338 21834424 + 19 NA exon (FBgn0003866, exon 2 of 3) protein_coding-exon (FBgn0003866, exon 2 of 3) 5788 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_112 chr2L 1419564 1419618 + 19 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 858 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4666 chr3R 1607749 1607803 + 19 NA promoter-TSS (FBgn0027608) protein_coding-promoter-TSS (FBgn0027608) 292 FBgn0037375 FBgn0037375 FBtr0300738 kat-60L1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6363 chr3R 25583191 25583270 + 19 NA Intergenic Intergenic 8289 FBgn0260990 FBgn0260990 FBtr0085477 yata protein_coding Nup98-S2-pascual-garcia2017_R1_peak_590 chr2L 8853005 8853115 + 19 NA Intergenic Intergenic -9716 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6224 chr3R 24463082 24463136 + 19 NA exon (FBgn0039591, exon 3 of 3) protein_coding-exon (FBgn0039591, exon 3 of 3) 975 FBgn0039591 FBgn0039591 FBtr0085305 CG9988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6987 chrX 1397022 1397098 + 19 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 1 of 10) 4782 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2186 chr2R 5135605 5135728 + 19 NA promoter-TSS (FBgn0010114) protein_coding-promoter-TSS (FBgn0010114) -914 FBgn0010114 FBgn0010114 FBtr0088607 hig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_612 chr2L 8931433 8931525 + 19 NA exon (FBgn0085427, exon 11 of 11) protein_coding-exon (FBgn0085427, exon 11 of 11) -2584 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4943 chr3R 5745685 5745739 + 19 NA intron (FBgn0263097, intron 1 of 6) protein_coding-intron (FBgn0263097, intron 1 of 6) 45309 FBgn0263097 FBgn0263097 FBtr0114583 Glut4EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4135 chr3L 15122428 15122482 + 19 NA exon (FBgn0036482, exon 2 of 3) protein_coding-exon (FBgn0036482, exon 2 of 3) 2023 FBgn0036482 FBgn0036482 FBtr0075654 CG13457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1280 chr2L 17434273 17434354 + 19 NA exon (FBgn0032636, exon 2 of 4) protein_coding-exon (FBgn0032636, exon 2 of 4) 451 FBgn0032636 FBgn0032636 FBtr0080980 CG5043 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3790 chr3L 8661170 8661225 + 19 NA Intergenic Intergenic -7662 FBgn0001168 FBgn0001168 FBtr0076569 h protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3315 chr2RHet 1968927 1969031 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4065 chr3L 13884837 13884917 + 19 NA exon (FBgn0264006, exon 2 of 17) protein_coding-exon (FBgn0264006, exon 2 of 17) 10006 FBgn0036382 FBgn0036382 FBtr0075755 CG13737 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4571 chr3LHet 1271065 1271119 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5382 chr3R 12396724 12396778 + 19 NA promoter-TSS (FBgn0038445) protein_coding-promoter-TSS (FBgn0038445) -486 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3582 chr3L 4403394 4403448 + 19 NA promoter-TSS (FBgn0035540) protein_coding-promoter-TSS (FBgn0035540) -66 FBgn0035540 FBgn0035540 FBtr0330179 Syx17 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5294 chr3R 11483198 11483252 + 18 NA Intergenic Intergenic -8680 FBgn0053207 FBgn0053207 FBtr0083162 pxb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6336 chr3R 25514986 25515040 + 18 NA promoter-TSS (FBgn0039682) protein_coding-promoter-TSS (FBgn0039682) 20 FBgn0039682 FBgn0039682 FBtr0085463 Obp99c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4581 chr3LHet 2231651 2231705 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6981 chrX 1330125 1330192 + 18 NA exon (FBgn0259108, exon 6 of 8) protein_coding-exon (FBgn0259108, exon 6 of 8) -16578 FBgn0027796 FBgn0027796 FBtr0300224 Gr2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_981 chr2L 14603769 14603859 + 18 NA exon (FBgn0003016, exon 6 of 11) protein_coding-exon (FBgn0003016, exon 6 of 11) 4140 FBgn0028910 FBgn0028910 FBtr0080647 tRNA:P:35Bc tRNA Nup98-S2-pascual-garcia2017_R1_peak_1930 chr2R 362754 362823 + 18 NA Intergenic Intergenic -4230 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_261 chr2L 4098289 4098343 + 18 NA exon (FBgn0000547, exon 6 of 9) protein_coding-exon (FBgn0000547, exon 6 of 9) 12426 FBgn0086032 FBgn0086032 FBtr0114308 snoRNA:Me28S-C437 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4179 chr3L 16009797 16009890 + 18 NA TTS (FBgn0264601) protein_coding-TTS (FBgn0264601) 1574 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4945 chr3R 5784292 5784346 + 18 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 27463 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_875 chr2L 13514205 13514288 + 18 NA intron (FBgn0023407, intron 3 of 6) protein_coding-intron (FBgn0023407, intron 3 of 6) -13595 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1649 chr2L 21725450 21725549 + 18 NA intron (FBgn0051619, intron 17 of 19) protein_coding-intron (FBgn0051619, intron 16 of 18) 31967 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2933 chr2R 17452112 17452178 + 18 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 11395 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7223 chrX 16734125 16734179 + 18 NA TTS (FBgn0024941) protein_coding-TTS (FBgn0024941) 4247 FBgn0024941 FBgn0024941 FBtr0074350 RSG7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6250 chr3R 24605082 24605194 + 17 NA Intergenic Intergenic -10201 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6867 chrUextra 198021 198087 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3819 chr3L 9085631 9085717 + 17 NA promoter-TSS (FBgn0043806) protein_coding-promoter-TSS (FBgn0043806) -479 FBgn0043806 FBgn0043806 FBtr0076529 CG32032 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5941 chr3R 21727341 21727423 + 17 NA promoter-TSS (FBgn0051089) protein_coding-promoter-TSS (FBgn0051089) -983 FBgn0051089 FBgn0051089 FBtr0084942 CG31089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1084 chr2L 15437828 15437882 + 17 NA Intergenic Intergenic 4493 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6343 chr3R 25521287 25521522 + 17 NA exon (FBgn0039683, exon 4 of 4) protein_coding-exon (FBgn0039683, exon 4 of 4) 3091 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5525 chr3R 13985478 13985539 + 17 NA TTS (FBgn0038568) protein_coding-TTS (FBgn0038568) 1085 FBgn0038568 FBgn0038568 FBtr0083547 CG14315 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1640 chr2L 21668458 21668512 + 17 NA exon (FBgn0032957, exon 7 of 11) protein_coding-exon (FBgn0032957, exon 7 of 11) 9045 FBgn0032957 FBgn0032957 FBtr0085917 CG2225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5563 chr3R 14422130 14422184 + 17 NA intron (FBgn0038629, intron 3 of 7) protein_coding-intron (FBgn0038629, intron 4 of 8) -2321 FBgn0038630 FBgn0038630 FBtr0083636 CG14305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1482 chr2L 19865912 19866017 + 17 NA promoter-TSS (FBgn0263873) protein_coding-promoter-TSS (FBgn0263873) 9863 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3056 chr2R 19608431 19608485 + 17 NA promoter-TSS (FBgn0034898) protein_coding-promoter-TSS (FBgn0034898) -999 FBgn0034898 FBgn0034898 FBtr0072094 CG18128 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5327 chr3R 11889671 11889808 + 17 NA exon (FBgn0038397, exon 7 of 12) protein_coding-exon (FBgn0038397, exon 7 of 12) 3495 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6347 chr3R 25529247 25529302 + 17 NA Intergenic Intergenic 10961 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4115 chr3L 14699681 14699924 + 17 NA promoter-TSS (FBgn0259175) protein_coding-promoter-TSS (FBgn0259175) -49 FBgn0259175 FBgn0259175 FBtr0333043 ome protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3701 chr3L 6978611 6978697 + 17 NA promoter-TSS (FBgn0250849) protein_coding-promoter-TSS (FBgn0250849) -968 FBgn0250849 FBgn0250849 FBtr0076933 CG32388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3174 chr2RHet 493101 493185 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_601 chr2L 8879271 8879325 + 16 NA Intergenic Intergenic -12191 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3677 chr3L 6740356 6740424 + 16 NA promoter-TSS (FBgn0035713) protein_coding-promoter-TSS (FBgn0035713) -4126 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3040 chr2R 19369860 19369950 + 16 NA exon (FBgn0264339, exon 7 of 14) protein_coding-exon (FBgn0264339, exon 7 of 14) -4905 FBgn0264337 FBgn0264337 FBtr0331988 CR43793 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4932 chr3R 5560754 5560830 + 16 NA exon (FBgn0037736, exon 16 of 16) protein_coding-exon (FBgn0037736, exon 16 of 16) -1805 FBgn0003886 FBgn0003886 FBtr0082087 alphaTub85E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7261 chrX 19800899 19800963 + 16 NA TTS (FBgn0052529) protein_coding-TTS (FBgn0052529) 3623 FBgn0052821 FBgn0052821 FBtr0307588 CR32821 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5687 chr3R 15964967 15965057 + 16 NA exon (FBgn0262025, exon 3 of 3) ncRNA-exon (FBgn0262025, exon 3 of 3) 631 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5326 chr3R 11886655 11886751 + 16 NA TTS (FBgn0027948) protein_coding-TTS (FBgn0027948) 6531 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_641 chr2L 9602255 9602356 + 16 NA Intergenic Intergenic -1452 FBgn0032132 FBgn0032132 FBtr0114535 CG4382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2943 chr2R 17485489 17485543 + 16 NA Intergenic Intergenic 7625 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_713 chr2L 11151778 11151832 + 16 NA exon (FBgn0032350, exon 6 of 6) protein_coding-exon (FBgn0032350, exon 6 of 6) -2930 FBgn0010197 FBgn0010197 FBtr0301840 Gyc32E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2246 chr2R 6190259 6190375 + 16 NA promoter-TSS (FBgn0033504) protein_coding-promoter-TSS (FBgn0033504) 6959 FBgn0028426 FBgn0028426 FBtr0088360 JhI-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1512 chr2L 20206927 20207003 + 16 NA Intergenic Intergenic -41258 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3671 chr3L 6657631 6657698 + 16 NA exon (FBgn0035709, exon 4 of 4) protein_coding-exon (FBgn0035709, exon 4 of 4) 1077 FBgn0035709 FBgn0035709 FBtr0076963 eIF4E-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_491 chr2L 7947039 7947093 + 16 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) 29999 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2939 chr2R 17467730 17467799 + 16 NA Intergenic Intergenic -3233 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3977 chr3L 12471576 12471630 + 16 NA intron (FBgn0036287, intron 2 of 7) protein_coding-intron (FBgn0036287, intron 2 of 7) 6451 FBgn0036287 FBgn0036287 FBtr0113167 CG10663 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1860 chr2L 22707859 22707948 + 16 NA Intergenic Intergenic -16895 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4562 chr3LHet 1077766 1077820 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1800 chr2L 22446577 22446641 + 16 NA exon (FBgn0040010, exon 2 of 2) protein_coding-exon (FBgn0040010, exon 2 of 2) 3637 FBgn0040010 FBgn0040010 FBtr0332631 CG17493 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3112 chr2R 20723930 20723984 + 15 NA Intergenic Intergenic -12542 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1366 chr2L 18312907 18312961 + 15 NA Intergenic Intergenic -3527 FBgn0263086 FBgn0263086 FBtr0307101 CG43354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3142 chr2RHet 58481 58589 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1467 chr2L 19715816 19715938 + 15 NA exon (FBgn0000464, exon 9 of 17) protein_coding-exon (FBgn0000464, exon 9 of 17) -14909 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3887 chr3L 10711560 10711678 + 15 NA Intergenic Intergenic -21642 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4631 chr3R 971010 971091 + 15 NA Intergenic Intergenic -7755 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5336 chr3R 11938311 11938372 + 15 NA Intergenic Intergenic 13403 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2550 chr2R 10855027 10855103 + 15 NA intron (FBgn0033987, intron 1 of 5) protein_coding-intron (FBgn0033987, intron 1 of 5) 1880 FBgn0033987 FBgn0033987 FBtr0087411 ckn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5962 chr3R 21903337 21903391 + 15 NA exon (FBgn0039411, exon 10 of 11) protein_coding-exon (FBgn0039411, exon 10 of 11) -14631 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1559 chr2L 20588570 20588652 + 15 NA Intergenic Intergenic 15585 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5591 chr3R 14798486 14798540 + 15 NA exon (FBgn0261262, exon 16 of 19) protein_coding-exon (FBgn0261262, exon 16 of 19) 6018 FBgn0038665 FBgn0038665 FBtr0304691 CG12269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2124 chr2R 4291577 4291710 + 15 NA exon (FBgn0033289, exon 2 of 6) protein_coding-exon (FBgn0033289, exon 2 of 6) 7585 FBgn0033289 FBgn0033289 FBtr0088764 CG2121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1361 chr2L 18275777 18275876 + 15 NA promoter-TSS (FBgn0261804) protein_coding-promoter-TSS (FBgn0261804) -56 FBgn0261804 FBgn0261804 FBtr0303280 CG42750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6371 chr3R 25643174 25643239 + 15 NA exon (FBgn0039703, exon 1 of 2) protein_coding-exon (FBgn0039703, exon 1 of 2) 280 FBgn0039703 FBgn0039703 FBtr0085532 CG7829 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6038 chr3R 22573232 22573310 + 15 NA Intergenic Intergenic 9923 FBgn0039454 FBgn0039454 FBtr0085043 CG14247 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6314 chr3R 25378878 25378957 + 15 NA Intergenic Intergenic -3192 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1838 chr2L 22622134 22622234 + 15 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 22343 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1881 chr2L 22907681 22907781 + 15 NA exon (FBgn0250907, exon 4 of 9) protein_coding-exon (FBgn0250907, exon 4 of 9) 10829 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5102 chr3R 8145332 8145392 + 15 NA Intergenic Intergenic 2994 FBgn0051432 FBgn0051432 FBtr0082616 tRNA:CR31432 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4590 chr3LHet 2540184 2540314 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1592 chr2L 20989385 20989467 + 15 NA intron (FBgn0250867, intron 5 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -20459 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3920 chr3L 11454668 11454749 + 15 NA Intergenic Intergenic 3118 FBgn0036161 FBgn0036161 FBtr0076176 CG7551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4314 chr3L 17677449 17677546 + 15 NA TTS (FBgn0085280) protein_coding-TTS (FBgn0085280) -5618 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4599 chr3R 434589 434643 + 15 NA Intergenic Intergenic -13608 FBgn0087012 FBgn0087012 FBtr0301885 5-HT2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6419 chr3R 26679625 26679694 + 15 NA exon (FBgn0003720, exon 2 of 2) protein_coding-exon (FBgn0003720, exon 2 of 2) 1622 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3549 chr3L 3264267 3264322 + 15 NA intron (FBgn0035427, intron 2 of 5) protein_coding-intron (FBgn0035427, intron 1 of 4) -4201 FBgn0085294 FBgn0085294 FBtr0331459 CG34265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4298 chr3L 17578077 17578157 + 15 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -18855 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6539 chr3R 27870449 27870553 + 15 NA Intergenic Intergenic 6406 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6714 chrU 201915 202003 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1781 chr2L 22299829 22299933 + 15 NA Intergenic Intergenic -40741 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5356 chr3R 12204166 12204233 + 15 NA exon (FBgn0003513, exon 6 of 8) protein_coding-exon (FBgn0003513, exon 6 of 8) -7944 FBgn0038423 FBgn0038423 FBtr0300678 CG10317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4888 chr3R 4514044 4514169 + 15 NA Intergenic Intergenic 6216 FBgn0001180 FBgn0001180 FBtr0081951 hb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2154 chr2R 4688507 4688573 + 15 NA intron (FBgn0024189, intron 1 of 21) protein_coding-intron (FBgn0024189, intron 1 of 20) 2518 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2595 chr2R 11612917 11612999 + 15 NA Intergenic Intergenic -1945 FBgn0050089 FBgn0050089 FBtr0087285 CG30089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2831 chr2R 15667841 15667931 + 15 NA Intergenic Intergenic 3639 FBgn0034474 FBgn0034474 FBtr0086343 Obp56g protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2542 chr2R 10703791 10703845 + 15 NA Intergenic Intergenic 3674 FBgn0033969 FBgn0033969 FBtr0087464 CG10202 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3004 chr2R 18795536 18795628 + 15 NA intron (FBgn0034797, intron 2 of 11) protein_coding-intron (FBgn0034797, intron 2 of 10) 10707 FBgn0050187 FBgn0050187 FBtr0304796 CG30187 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4852 chr3R 4150897 4150955 + 15 NA TTS (FBgn0037577) protein_coding-TTS (FBgn0037577) 869 FBgn0037577 FBgn0037577 FBtr0081837 CG7443 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3506 chr3L 2036470 2036524 + 15 NA TTS (FBgn0259701) protein_coding-TTS (FBgn0259701) 1727 FBgn0259701 FBgn0259701 FBtr0309792 CG42355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4635 chr3R 1033310 1033372 + 15 NA intron (FBgn0259212, intron 1 of 19) protein_coding-intron (FBgn0259212, intron 1 of 16) 9806 FBgn0259212 FBgn0259212 FBtr0299710 cno protein_coding Nup98-S2-pascual-garcia2017_R1_peak_911 chr2L 14137827 14137881 + 15 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 3363 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4413 chr3L 20410406 20410480 + 15 NA intron (FBgn0036985, intron 2 of 3) protein_coding-intron (FBgn0036985, intron 2 of 3) 3739 FBgn0036985 FBgn0036985 FBtr0078191 zye protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4770 chr3R 2864681 2864795 + 15 NA Intergenic Intergenic -13319 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5610 chr3R 15110916 15111079 + 15 NA Intergenic Intergenic -3082 FBgn0263405 FBgn0263405 FBtr0309184 CR43451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1228 chr2L 17038660 17038773 + 15 NA Intergenic Intergenic 4449 FBgn0264346 FBgn0264346 FBtr0332013 CR43802 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5536 chr3R 14143280 14143389 + 15 NA intron (FBgn0051235, intron 4 of 4) protein_coding-intron (FBgn0051235, intron 4 of 4) -6706 FBgn0038603 FBgn0038603 FBtr0083592 PKD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5337 chr3R 11945901 11945977 + 15 NA Intergenic Intergenic -8512 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2679 chr2R 13061163 13061223 + 15 NA Intergenic Intergenic -7045 FBgn0034204 FBgn0034204 FBtr0086997 CG10953 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_217 chr2L 3281383 3281437 + 15 NA promoter-TSS (FBgn0031514) protein_coding-promoter-TSS (FBgn0031514) -1953 FBgn0031514 FBgn0031514 FBtr0077609 CG3332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_104 chr2L 1383001 1383098 + 15 NA intron (FBgn0002543, intron 13 of 13) protein_coding-intron (FBgn0002543, intron 13 of 13) 14960 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6449 chr3R 26871852 26871906 + 15 NA exon (FBgn0010015, exon 13 of 13) protein_coding-exon (FBgn0010015, exon 13 of 13) -1052 FBgn0053920 FBgn0053920 FBtr0091924 CG33920 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6635 chr4 881674 881797 + 15 NA exon (FBgn0039936, exon 6 of 9) protein_coding-exon (FBgn0039936, exon 6 of 9) 5917 FBgn0039936 FBgn0039936 FBtr0300886 CG11148 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5735 chr3R 16518591 16518668 + 15 NA exon (FBgn0024944, exon 7 of 7) protein_coding-exon (FBgn0024944, exon 7 of 7) 14724 FBgn0263406 FBgn0263406 FBtr0309185 CR43452 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1729 chr2L 22049033 22049109 + 15 NA Intergenic Intergenic 5174 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6984 chrX 1383504 1383587 + 15 NA exon (FBgn0053513, exon 10 of 11) protein_coding-exon (FBgn0053513, exon 10 of 11) -6492 FBgn0003517 FBgn0003517 FBtr0070291 sta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7 chr2L 56156 56261 + 15 NA intron (FBgn0051973, intron 3 of 14) protein_coding-intron (FBgn0051973, intron 2 of 12) 3060 FBgn0051973 FBgn0051973 FBtr0309229 Cda5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5774 chr3R 17167606 17167692 + 15 NA exon (FBgn0038881, exon 2 of 15) protein_coding-exon (FBgn0038881, exon 2 of 15) 7657 FBgn0038881 FBgn0038881 FBtr0084095 CG16791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1093 chr2L 15523004 15523058 + 15 NA exon (FBgn0264261, exon 2 of 3) ncRNA-exon (FBgn0264261, exon 2 of 3) 593 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6327 chr3R 25458021 25458105 + 15 NA exon (FBgn0015129, exon 5 of 5) protein_coding-exon (FBgn0015129, exon 5 of 5) 13307 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3980 chr3L 12573669 12573750 + 15 NA promoter-TSS (FBgn0015904) protein_coding-promoter-TSS (FBgn0015904) -63 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_922 chr2L 14296107 14296189 + 15 NA promoter-TSS (FBgn0263649) ncRNA-promoter-TSS (FBgn0263649) -754 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1817 chr2L 22554750 22554812 + 15 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 82299 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1737 chr2L 22061247 22061348 + 15 NA Intergenic Intergenic 3983 FBgn0260996 FBgn0260996 FBtr0301799 CG42597 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_675 chr2L 10282520 10282590 + 15 NA exon (FBgn0032208, exon 7 of 8) protein_coding-exon (FBgn0032208, exon 7 of 8) -1683 FBgn0054043 FBgn0054043 FBtr0300408 CG34043 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6474 chr3R 27059658 27059712 + 15 NA exon (FBgn0039833, exon 3 of 6) protein_coding-exon (FBgn0039833, exon 3 of 6) 1318 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2906 chr2R 16939170 16939248 + 15 NA exon (FBgn0003391, exon 2 of 2) protein_coding-exon (FBgn0003391, exon 2 of 2) 5455 FBgn0003391 FBgn0003391 FBtr0071546 shg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2942 chr2R 17483121 17483211 + 15 NA Intergenic Intergenic 5275 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_429 chr2L 6540702 6540789 + 15 NA intron (FBgn0000320, intron 1 of 4) protein_coding-intron (FBgn0000320, intron 1 of 4) -10236 FBgn0000320 FBgn0000320 FBtr0306113 eya protein_coding Nup98-S2-pascual-garcia2017_R1_peak_25 chr2L 706001 706090 + 15 NA exon (FBgn0000497, exon 2 of 12) protein_coding-exon (FBgn0000497, exon 2 of 12) 8923 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6109 chr3R 23472912 23472999 + 15 NA TTS (FBgn0051058) protein_coding-TTS (FBgn0051058) 3479 FBgn0051058 FBgn0051058 FBtr0085198 CG31058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3369 chr2RHet 2314347 2314441 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4420 chr3L 20717228 20717282 + 15 NA Intergenic Intergenic -4955 FBgn0037015 FBgn0037015 FBtr0305579 cmpy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5320 chr3R 11769471 11769554 + 15 NA intron (FBgn0013334, intron 2 of 9) protein_coding-intron (FBgn0013334, intron 1 of 8) 7153 FBgn0051088 FBgn0051088 FBtr0083241 CG31088 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7153 chrX 12598528 12598606 + 15 NA intron (FBgn0263865, intron 7 of 10) protein_coding-intron (FBgn0263865, intron 6 of 9) -1320 FBgn0030417 FBgn0030417 FBtr0073685 CG15725 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5212 chr3R 9824619 9824673 + 15 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 27035 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6730 chrU 252241 252323 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5493 chr3R 13690146 13690259 + 15 NA exon (FBgn0261649, exon 7 of 10) protein_coding-exon (FBgn0261649, exon 7 of 10) -41984 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5079 chr3R 7861592 7861646 + 15 NA TTS (FBgn0037985) protein_coding-TTS (FBgn0037985) 2755 FBgn0037985 FBgn0037985 FBtr0082538 ssp5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1220 chr2L 16989341 16989415 + 15 NA intron (FBgn0053179, intron 4 of 6) protein_coding-intron (FBgn0053179, intron 4 of 6) 4400 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4821 chr3R 3707445 3707539 + 15 NA intron (FBgn0037525, intron 2 of 14) protein_coding-intron (FBgn0037525, intron 2 of 14) 4963 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4786 chr3R 3117469 3117549 + 15 NA intron (FBgn0259172, intron 7 of 8) protein_coding-intron (FBgn0259172, intron 6 of 7) 5825 FBgn0045843 FBgn0045843 FBtr0081581 RacGAP84C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3107 chr2R 20581974 20582046 + 15 NA promoter-TSS (FBgn0035050) protein_coding-promoter-TSS (FBgn0035050) -101 FBgn0035050 FBgn0035050 FBtr0072442 ST6Gal protein_coding Nup98-S2-pascual-garcia2017_R1_peak_75 chr2L 1096736 1096831 + 15 NA intron (FBgn0031299, intron 1 of 7) protein_coding-intron (FBgn0031299, intron 2 of 8) 5721 FBgn0031299 FBgn0031299 FBtr0332571 CG4629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_295 chr2L 4418009 4418091 + 15 NA TTS (FBgn0051963) tRNA-TTS (FBgn0051963) 998 FBgn0051963 FBgn0051963 FBtr0077458 tRNA:CR31963 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6145 chr3R 23820981 23821045 + 15 NA Intergenic Intergenic -4540 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1242 chr2L 17127429 17127490 + 15 NA Intergenic Intergenic -1498 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4645 chr3R 1235592 1235646 + 15 NA exon (FBgn0037324, exon 2 of 7) protein_coding-exon (FBgn0037324, exon 2 of 7) 2509 FBgn0037324 FBgn0037324 FBtr0078794 Orco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1382 chr2L 18586891 18586945 + 15 NA Intergenic Intergenic -3979 FBgn0032688 FBgn0032688 FBtr0081070 CG15160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_530 chr2L 8594365 8594431 + 15 NA promoter-TSS (FBgn0264437) ncRNA-promoter-TSS (FBgn0264437) 91 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3058 chr2R 19652129 19652205 + 15 NA intron (FBgn0034903, intron 7 of 13) protein_coding-intron (FBgn0034903, intron 7 of 13) 11903 FBgn0034902 FBgn0034902 FBtr0072091 CG5532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6001 chr3R 22247414 22247468 + 15 NA Intergenic Intergenic 3374 FBgn0040606 FBgn0040606 FBtr0309031 CG6503 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1452 chr2L 19605024 19605120 + 15 NA intron (FBgn0000464, intron 2 of 18) protein_coding-intron (FBgn0000464, intron 2 of 17) 18449 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2618 chr2R 12105988 12106063 + 15 NA TTS (FBgn0050238) tRNA-TTS (FBgn0050238) 925 FBgn0050238 FBgn0050238 FBtr0087197 tRNA:CR30238 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6322 chr3R 25406114 25406210 + 15 NA Intergenic Intergenic 7660 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4525 chr3L 24116145 24116265 + 15 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 48876 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3355 chr2RHet 2245084 2245202 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5384 chr3R 12420868 12420922 + 15 NA exon (FBgn0038447, exon 1 of 4) protein_coding-exon (FBgn0038447, exon 1 of 4) 759 FBgn0038447 FBgn0038447 FBtr0083327 CG14892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_998 chr2L 14714068 14714160 + 15 NA TTS (FBgn0028855) protein_coding-TTS (FBgn0028855) 337 FBgn0085194 FBgn0085194 FBtr0112356 CG34165 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6403 chr3R 26261169 26261239 + 15 NA TTS (FBgn0039769) protein_coding-TTS (FBgn0039769) 3418 FBgn0039769 FBgn0039769 FBtr0085644 CG15534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2030 chr2R 2688923 2689036 + 15 NA Intergenic Intergenic -6138 FBgn0014028 FBgn0014028 FBtr0086156 SdhB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4219 chr3L 16492079 16492178 + 15 NA exon (FBgn0003515, exon 4 of 7) protein_coding-exon (FBgn0003515, exon 4 of 7) 1377 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1676 chr2L 21840455 21840567 + 15 NA Intergenic Intergenic 11918 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2149 chr2R 4650894 4650948 + 15 NA Intergenic Intergenic 26046 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6180 chr3R 24054679 24054750 + 15 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 34630 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3281 chr2RHet 1904769 1904854 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1323 chr2L 17896813 17896899 + 15 NA Intergenic Intergenic 3044 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3202 chr2RHet 708835 708899 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1541 chr2L 20509259 20509344 + 15 NA Intergenic Intergenic 14195 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6458 chr3R 26940535 26940716 + 15 NA Intergenic Intergenic -5715 FBgn0039818 FBgn0039818 FBtr0085739 CG11318 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4294 chr3L 17557001 17557087 + 15 NA intron (FBgn0000567, intron 7 of 7) protein_coding-intron (FBgn0000567, intron 7 of 7) 2218 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4488 chr3L 23606698 23606760 + 15 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 57704 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5004 chr3R 6594104 6594168 + 15 NA promoter-TSS (FBgn0010421) protein_coding-promoter-TSS (FBgn0010421) -468 FBgn0010421 FBgn0010421 FBtr0082310 TfIIFbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6402 chr3R 26260604 26260658 + 15 NA TTS (FBgn0039770) protein_coding-TTS (FBgn0039770) 2845 FBgn0039769 FBgn0039769 FBtr0085644 CG15534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3842 chr3L 9978284 9978338 + 15 NA intron (FBgn0040823, intron 1 of 6) protein_coding-intron (FBgn0040823, intron 1 of 5) 10560 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5207 chr3R 9738082 9738154 + 15 NA Intergenic Intergenic 10537 FBgn0000576 FBgn0000576 FBtr0082863 ems protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2318 chr2R 7393601 7393658 + 15 NA exon (FBgn0001269, exon 4 of 6) protein_coding-exon (FBgn0001269, exon 4 of 6) 21759 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6286 chr3R 25159940 25160057 + 15 NA Intergenic Intergenic -14662 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6179 chr3R 24053991 24054045 + 15 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 35326 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4980 chr3R 6376881 6376935 + 15 NA intron (FBgn0001235, intron 6 of 12) protein_coding-intron (FBgn0001235, intron 6 of 11) -38130 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5 chr2L 27148 27274 + 15 NA exon (FBgn0051973, exon 11 of 13) protein_coding-exon (FBgn0051973, exon 11 of 13) -2056 FBgn0031209 FBgn0031209 FBtr0113008 Ir21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4064 chr3L 13884425 13884541 + 15 NA exon (FBgn0264006, exon 2 of 17) protein_coding-exon (FBgn0264006, exon 2 of 17) 9612 FBgn0036382 FBgn0036382 FBtr0075755 CG13737 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2033 chr2R 2744488 2744556 + 15 NA Intergenic Intergenic 15752 FBgn0033109 FBgn0033109 FBtr0086208 coro protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5181 chr3R 9392775 9392846 + 15 NA Intergenic Intergenic -7737 FBgn0264430 FBgn0264430 FBtr0332550 CR43848 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6679 chrU 31349 31416 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3333 chr2RHet 2139398 2139477 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4040 chr3L 13548040 13548134 + 15 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -35382 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2626 chr2R 12138936 12138990 + 15 NA intron (FBgn0261612, intron 3 of 8) protein_coding-intron (FBgn0261612, intron 3 of 8) 8037 FBgn0261612 FBgn0261612 FBtr0302924 Cng protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4092 chr3L 14316973 14317059 + 15 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) -5430 FBgn0036419 FBgn0036419 FBtr0075744 CG13482 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1423 chr2L 19210651 19210710 + 15 NA Intergenic Intergenic 20334 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1057 chr2L 15211312 15211381 + 15 NA Intergenic Intergenic -3876 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_572 chr2L 8787382 8787462 + 15 NA Intergenic Intergenic -4928 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1576 chr2L 20725323 20725398 + 15 NA exon (FBgn0032878, exon 2 of 4) protein_coding-exon (FBgn0032878, exon 2 of 4) 1191 FBgn0032878 FBgn0032878 FBtr0081396 CG9316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1691 chr2L 21884707 21884761 + 15 NA Intergenic Intergenic -9493 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2951 chr2R 17771890 17772014 + 15 NA intron (FBgn0085397, intron 1 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 1135 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7165 chrX 12695173 12695227 + 15 NA promoter-TSS (FBgn0030425) protein_coding-promoter-TSS (FBgn0030425) -494 FBgn0030425 FBgn0030425 FBtr0305591 CG3775 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2197 chr2R 5387656 5387717 + 15 NA intron (FBgn0004360, intron 1 of 4) protein_coding-intron (FBgn0004360, intron 1 of 4) -3607 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_839 chr2L 12918446 12918500 + 15 NA exon (FBgn0040509, exon 6 of 12) protein_coding-exon (FBgn0040509, exon 6 of 12) 1659 FBgn0040509 FBgn0040509 FBtr0080414 ACXB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5942 chr3R 21728700 21728779 + 15 NA TTS (FBgn0051091) protein_coding-TTS (FBgn0051091) 374 FBgn0051089 FBgn0051089 FBtr0084942 CG31089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5574 chr3R 14640523 14640577 + 15 NA intron (FBgn0038653, intron 1 of 3) protein_coding-intron (FBgn0038653, intron 1 of 2) -22480 FBgn0038652 FBgn0038652 FBtr0083679 CG7720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4512 chr3L 23887592 23887677 + 15 NA intron (FBgn0058470, intron 6 of 12) protein_coding-intron (FBgn0058470, intron 6 of 12) -11392 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3742 chr3L 7620948 7621002 + 15 NA intron (FBgn0035802, intron 9 of 16) protein_coding-intron (FBgn0035802, intron 7 of 14) -11842 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3962 chr3L 12287437 12287491 + 15 NA intron (FBgn0036274, intron 1 of 5) protein_coding-intron (FBgn0036274, intron 1 of 5) 1759 FBgn0036274 FBgn0036274 FBtr0301071 CG4328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3137 chr2RHet 28572 28626 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4592 chr3R 80741 80817 + 15 NA exon (FBgn0037227, exon 2 of 2) protein_coding-exon (FBgn0037227, exon 2 of 2) 277 FBgn0037227 FBgn0037227 FBtr0078976 TwdlV protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6172 chr3R 24007147 24007207 + 15 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 34575 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6534 chr3R 27834165 27834219 + 15 NA Intergenic Intergenic 21621 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_186 chr2L 2610901 2610981 + 15 NA exon (FBgn0031440, exon 2 of 2) protein_coding-exon (FBgn0031440, exon 2 of 2) 795 FBgn0031440 FBgn0031440 FBtr0114513 CG15395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4166 chr3L 15746998 15747109 + 15 NA Intergenic Intergenic -25523 FBgn0010105 FBgn0010105 FBtr0075579 comm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_374 chr2L 5553117 5553185 + 15 NA promoter-TSS (FBgn0031721) protein_coding-promoter-TSS (FBgn0031721) 699 FBgn0031720 FBgn0031720 FBtr0079121 CG14013 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5551 chr3R 14338968 14339068 + 15 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 32290 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1782 chr2L 22311370 22311472 + 15 NA promoter-TSS (FBgn0039972) protein_coding-promoter-TSS (FBgn0039972) -29201 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_80 chr2L 1196306 1196375 + 15 NA exon (FBgn0031322, exon 6 of 6) protein_coding-exon (FBgn0031322, exon 6 of 6) 2864 FBgn0031323 FBgn0031323 FBtr0077977 CG5139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1645 chr2L 21719523 21719585 + 15 NA exon (FBgn0051619, exon 15 of 19) protein_coding-exon (FBgn0051619, exon 15 of 19) 35372 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_807 chr2L 12653997 12654055 + 15 NA Intergenic Intergenic -7670 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2840 chr2R 15867328 15867400 + 15 NA intron (FBgn0034479, intron 1 of 3) protein_coding-intron (FBgn0034479, intron 1 of 3) 615 FBgn0034479 FBgn0034479 FBtr0305676 CG8654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2453 chr2R 9281457 9281531 + 15 NA promoter-TSS (FBgn0263774) protein_coding-promoter-TSS (FBgn0263774) 284 FBgn0041579 FBgn0041579 FBtr0305795 AttC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2885 chr2R 16633648 16633719 + 15 NA intron (FBgn0040726, intron 6 of 7) protein_coding-intron (FBgn0040726, intron 6 of 7) -4769 FBgn0085230 FBgn0085230 FBtr0112394 CG34201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4947 chr3R 5800582 5800636 + 15 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 11173 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_389 chr2L 5763948 5764041 + 15 NA exon (FBgn0031737, exon 2 of 2) protein_coding-exon (FBgn0031737, exon 2 of 2) 2148 FBgn0031737 FBgn0031737 FBtr0079163 obst-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2242 chr2R 6097867 6097954 + 15 NA intron (FBgn0000448, intron 1 of 8) protein_coding-intron (FBgn0000448, intron 1 of 8) -10714 FBgn0085250 FBgn0085250 FBtr0299834 CG34221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_195 chr2L 2820974 2821028 + 15 NA exon (FBgn0031464, exon 4 of 10) protein_coding-exon (FBgn0031464, exon 4 of 10) 4505 FBgn0031465 FBgn0031465 FBtr0077723 CG3123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_34 chr2L 757828 757929 + 15 NA TTS (FBgn0031275) protein_coding-TTS (FBgn0031275) 7269 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5466 chr3R 13392894 13392977 + 15 NA exon (FBgn0264005, exon 3 of 3) protein_coding-exon (FBgn0264005, exon 3 of 3) 8283 FBgn0264005 FBgn0264005 FBtr0330386 Hmx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5288 chr3R 11406268 11406474 + 15 NA Intergenic Intergenic -27877 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6472 chr3R 27031136 27031198 + 15 NA exon (FBgn0000313, exon 12 of 15) protein_coding-exon (FBgn0000313, exon 12 of 15) 5285 FBgn0000313 FBgn0000313 FBtr0330101 chp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1784 chr2L 22325488 22325542 + 15 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -15107 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1135 chr2L 16016590 16016691 + 15 NA intron (FBgn0028644, intron 2 of 7) protein_coding-intron (FBgn0028644, intron 2 of 7) -10361 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6496 chr3R 27329760 27329856 + 15 NA exon (FBgn0039851, exon 5 of 7) protein_coding-exon (FBgn0039851, exon 5 of 7) 4847 FBgn0039851 FBgn0039851 FBtr0085790 mey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4505 chr3L 23807434 23807514 + 15 NA Intergenic Intergenic 30143 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1131 chr2L 15979607 15979661 + 15 NA promoter-TSS (FBgn0028858) protein_coding-promoter-TSS (FBgn0028858) 99 FBgn0028858 FBgn0028858 FBtr0080800 CG10839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2851 chr2R 16009291 16009345 + 15 NA Intergenic Intergenic 10302 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5173 chr3R 9235999 9236053 + 15 NA exon (FBgn0041711, exon 3 of 3) protein_coding-exon (FBgn0041711, exon 3 of 3) -3337 FBgn0038151 FBgn0038151 FBtr0302576 yellow-e2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_620 chr2L 9057009 9057081 + 15 NA intron (FBgn0051708, intron 6 of 9) protein_coding-intron (FBgn0051708, intron 6 of 9) 14117 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4716 chr3R 2398479 2398549 + 15 NA intron (FBgn0053202, intron 1 of 7) protein_coding-intron (FBgn0053202, intron 1 of 7) -7992 FBgn0037455 FBgn0037455 FBtr0089748 CG2336 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3808 chr3L 8999493 8999547 + 15 NA exon (FBgn0035954, exon 5 of 5) protein_coding-exon (FBgn0035954, exon 5 of 5) 1224 FBgn0035954 FBgn0035954 FBtr0076521 Doc3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_988 chr2L 14629974 14630050 + 15 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 13743 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6275 chr3R 24999659 24999770 + 15 NA exon (FBgn0039647, exon 7 of 7) protein_coding-exon (FBgn0039647, exon 7 of 7) 8199 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_872 chr2L 13486162 13486216 + 15 NA intron (FBgn0263354, intron 2 of 6) protein_coding-intron (FBgn0263354, intron 4 of 8) 24415 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1783 chr2L 22319877 22319959 + 15 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -20704 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6524 chr3R 27664833 27664910 + 15 NA intron (FBgn0039883, intron 9 of 10) protein_coding-intron (FBgn0039883, intron 8 of 9) 13305 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3165 chr2RHet 397407 397461 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6031 chr3R 22518937 22519024 + 15 NA exon (FBgn0039448, exon 2 of 2) protein_coding-exon (FBgn0039448, exon 2 of 2) 265 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1307 chr2L 17786611 17786665 + 15 NA TTS (FBgn0262018) protein_coding-TTS (FBgn0262018) -5774 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3903 chr3L 10923637 10923691 + 15 NA Intergenic Intergenic -13892 FBgn0054050 FBgn0054050 FBtr0100105 CG34050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4435 chr3L 21472784 21472838 + 15 NA Intergenic Intergenic -3232 FBgn0014143 FBgn0014143 FBtr0078395 croc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3025 chr2R 19138242 19138356 + 15 NA Intergenic Intergenic -2889 FBgn0034837 FBgn0034837 FBtr0072049 RpL22-like protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6111 chr3R 23474165 23474241 + 15 NA exon (FBgn0051058, exon 3 of 3) protein_coding-exon (FBgn0051058, exon 3 of 3) 2231 FBgn0051058 FBgn0051058 FBtr0085198 CG31058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1976 chr2R 1341162 1341216 + 15 NA exon (FBgn0259247, exon 6 of 6) protein_coding-exon (FBgn0259247, exon 6 of 6) 37332 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5247 chr3R 10646977 10647031 + 15 NA promoter-TSS (FBgn0053555) protein_coding-promoter-TSS (FBgn0053555) 19509 FBgn0038262 FBgn0038262 FBtr0082993 CG14857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_904 chr2L 14064296 14064417 + 15 NA intron (FBgn0028875, intron 4 of 13) protein_coding-intron (FBgn0028875, intron 4 of 13) 16774 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5761 chr3R 16838239 16838357 + 15 NA exon (FBgn0013995, exon 8 of 9) protein_coding-exon (FBgn0013995, exon 8 of 9) -3373 FBgn0038846 FBgn0038846 FBtr0309208 CG5697 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6418 chr3R 26664025 26664083 + 15 NA exon (FBgn0039804, exon 3 of 4) protein_coding-exon (FBgn0039804, exon 3 of 4) 10482 FBgn0039804 FBgn0039804 FBtr0085708 CG15544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2477 chr2R 9594221 9594319 + 15 NA exon (FBgn0000633, exon 4 of 13) protein_coding-exon (FBgn0000633, exon 4 of 13) -13396 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1561 chr2L 20590862 20590916 + 15 NA Intergenic Intergenic 13307 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4660 chr3R 1403773 1403839 + 15 NA exon (FBgn0023023, exon 9 of 10) protein_coding-exon (FBgn0023023, exon 9 of 10) 6976 FBgn0023023 FBgn0023023 FBtr0114453 CRMP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4810 chr3R 3492575 3492687 + 15 NA exon (FBgn0051146, exon 3 of 12) protein_coding-exon (FBgn0051146, exon 3 of 12) 8660 FBgn0051146 FBgn0051146 FBtr0305969 Nlg1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5726 chr3R 16353039 16353108 + 15 NA Intergenic Intergenic 7353 FBgn0262146 FBgn0262146 FBtr0304129 MtnE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_902 chr2L 14051207 14051279 + 15 NA intron (FBgn0028875, intron 2 of 13) protein_coding-intron (FBgn0028875, intron 2 of 13) 3661 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4586 chr3LHet 2469728 2469806 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6634 chr4 858823 858913 + 15 NA exon (FBgn0039937, exon 2 of 2) protein_coding-exon (FBgn0039937, exon 2 of 2) -4229 FBgn0039938 FBgn0039938 FBtr0089252 Sox102F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3400 chr3L 221586 221669 + 15 NA promoter-TSS (FBgn0035113) protein_coding-promoter-TSS (FBgn0035113) -906 FBgn0035113 FBgn0035113 FBtr0072525 pyx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1637 chr2L 21648449 21648503 + 15 NA TTS (FBgn0023416) protein_coding-TTS (FBgn0023416) -9080 FBgn0262620 FBgn0262620 FBtr0305481 CG43144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1598 chr2L 21063226 21063316 + 15 NA intron (FBgn0032910, intron 1 of 7) protein_coding-intron (FBgn0032910, intron 1 of 7) 7010 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1378 chr2L 18504028 18504118 + 15 NA promoter-TSS (FBgn0032683) protein_coding-promoter-TSS (FBgn0032683) -3216 FBgn0032683 FBgn0032683 FBtr0332323 kon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5005 chr3R 6600521 6600597 + 15 NA exon (FBgn0020439, exon 2 of 2) protein_coding-exon (FBgn0020439, exon 2 of 2) 2531 FBgn0020439 FBgn0020439 FBtr0082306 fau protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1954 chr2R 834629 834729 + 15 NA Intergenic Intergenic -2493 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1534 chr2L 20407109 20407171 + 15 NA Intergenic Intergenic -7746 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3001 chr2R 18764064 18764146 + 15 NA exon (FBgn0034789, exon 6 of 14) protein_coding-exon (FBgn0034789, exon 6 of 14) 1811 FBgn0034789 FBgn0034789 FBtr0304923 PIP5K59B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4914 chr3R 5127495 5127549 + 15 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -19970 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7243 chrX 18248764 18248818 + 15 NA intron (FBgn0030913, intron 2 of 5) protein_coding-intron (FBgn0030913, intron 2 of 5) 1330 FBgn0030913 FBgn0030913 FBtr0074578 CG6123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1124 chr2L 15882216 15882270 + 15 NA Intergenic Intergenic -2178 FBgn0028935 FBgn0028935 FBtr0306681 CG7653 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3289 chr2RHet 1919089 1919173 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2350 chr2R 7704417 7704497 + 15 NA Intergenic Intergenic -8413 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2660 chr2R 12568105 12568183 + 15 NA intron (FBgn0050463, intron 2 of 6) protein_coding-intron (FBgn0050463, intron 7 of 11) 3354 FBgn0050463 FBgn0050463 FBtr0113381 CG30463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4343 chr3L 18073151 18073205 + 15 NA Intergenic Intergenic 5232 FBgn0262898 FBgn0262898 FBtr0306318 CG43253 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2520 chr2R 10400236 10400319 + 15 NA TTS (FBgn0261823) protein_coding-TTS (FBgn0261823) -1262 FBgn0050197 FBgn0050197 FBtr0087494 CG30197 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1232 chr2L 17052065 17052119 + 15 NA Intergenic Intergenic -3811 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3234 chr2RHet 1325696 1325794 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2356 chr2R 7721184 7721275 + 15 NA intron (FBgn0033654, intron 2 of 3) protein_coding-intron (FBgn0033654, intron 2 of 3) 5806 FBgn0033654 FBgn0033654 FBtr0088064 Sobp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1901 chr2LHet 190792 190885 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6508 chr3R 27486946 27487010 + 15 NA exon (FBgn0039862, exon 4 of 4) protein_coding-exon (FBgn0039862, exon 4 of 4) -8209 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2562 chr2R 11074911 11074965 + 15 NA intron (FBgn0013467, intron 4 of 4) protein_coding-intron (FBgn0013467, intron 2 of 2) 2275 FBgn0262478 FBgn0262478 FBtr0304816 CG43068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3868 chr3L 10594324 10594429 + 15 NA Intergenic Intergenic 22300 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3873 chr3L 10611934 10612031 + 15 NA Intergenic Intergenic 4694 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6593 chr4 72691 72767 + 15 NA exon (FBgn0004859, exon 2 of 6) protein_coding-exon (FBgn0004859, exon 2 of 6) 4228 FBgn0004859 FBgn0004859 FBtr0308074 ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2386 chr2R 8264403 8264505 + 15 NA exon (FBgn0050045, exon 2 of 3) protein_coding-exon (FBgn0050045, exon 2 of 3) 279 FBgn0050045 FBgn0050045 FBtr0113359 Cpr49Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5070 chr3R 7664392 7664503 + 15 NA intron (FBgn0037956, intron 1 of 2) protein_coding-intron (FBgn0037956, intron 1 of 2) -16492 FBgn0037955 FBgn0037955 FBtr0082521 CG6950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5715 chr3R 16207698 16207782 + 15 NA exon (FBgn0262869, exon 19 of 20) protein_coding-exon (FBgn0262869, exon 19 of 20) 21710 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3287 chr2RHet 1912484 1912559 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6382 chr3R 25741587 25741641 + 15 NA exon (FBgn0003861, exon 12 of 14) protein_coding-exon (FBgn0003861, exon 12 of 14) -1546 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1787 chr2L 22342180 22342271 + 15 NA TTS (FBgn0263091) pseudogene-TTS (FBgn0263091) 1603 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3009 chr2R 18844143 18844228 + 15 NA Intergenic Intergenic -2862 FBgn0052835 FBgn0052835 FBtr0308941 CR32835 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6034 chr3R 22526285 22526365 + 15 NA exon (FBgn0023179, exon 8 of 12) protein_coding-exon (FBgn0023179, exon 8 of 12) -7080 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5457 chr3R 13311598 13311711 + 15 NA intron (FBgn0261046, intron 13 of 34) protein_coding-intron (FBgn0261046, intron 14 of 34) 19735 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1564 chr2L 20607348 20607402 + 15 NA exon (FBgn0263583, exon 1 of 1) ncRNA-exon (FBgn0263583, exon 1 of 1) 472 FBgn0263583 FBgn0263583 FBtr0309809 CR43608 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5739 chr3R 16572665 16572756 + 15 NA exon (FBgn0259222, exon 2 of 10) protein_coding-exon (FBgn0259222, exon 2 of 10) -1650 FBgn0051200 FBgn0051200 FBtr0083929 CG31200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2745 chr2R 14151379 14151433 + 15 NA Intergenic Intergenic 13292 FBgn0003022 FBgn0003022 FBtr0086768 Ote protein_coding Nup98-S2-pascual-garcia2017_R1_peak_517 chr2L 8502095 8502255 + 15 NA intron (FBgn0032048, intron 2 of 3) protein_coding-intron (FBgn0032048, intron 2 of 4) 4670 FBgn0032048 FBgn0032048 FBtr0300450 Dh31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4053 chr3L 13717036 13717090 + 15 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 79437 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3176 chr2RHet 496831 496930 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6246 chr3R 24601627 24601690 + 15 NA Intergenic Intergenic -13681 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1978 chr2R 1343470 1343544 + 15 NA TTS (FBgn0259247) protein_coding-TTS (FBgn0259247) 39650 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5006 chr3R 6660975 6661057 + 15 NA intron (FBgn0261053, intron 1 of 10) protein_coding-intron (FBgn0261053, intron 1 of 11) 8215 FBgn0261053 FBgn0261053 FBtr0304666 Cad86C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2278 chr2R 6595106 6595160 + 15 NA exon (FBgn0024836, exon 1 of 4) protein_coding-exon (FBgn0024836, exon 1 of 4) -17642 FBgn0033542 FBgn0033542 FBtr0088215 CG12309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3469 chr3L 1384481 1384542 + 15 NA exon (FBgn0003295, exon 2 of 4) protein_coding-exon (FBgn0003295, exon 2 of 4) 3982 FBgn0052329 FBgn0052329 FBtr0072684 tRNA:CR32329 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1693 chr2L 21887914 21888091 + 15 NA Intergenic Intergenic -6225 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2260 chr2R 6261364 6261448 + 15 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 6208 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4633 chr3R 976386 976440 + 15 NA promoter-TSS (FBgn0037295) protein_coding-promoter-TSS (FBgn0037295) -8921 FBgn0037294 FBgn0037294 FBtr0078773 CG12590 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6054 chr3R 22821759 22821890 + 15 NA promoter-TSS (FBgn0004842) protein_coding-promoter-TSS (FBgn0004842) -878 FBgn0004842 FBgn0004842 FBtr0085100 NepYr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1682 chr2L 21860679 21860741 + 15 NA Intergenic Intergenic 32117 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1533 chr2L 20404443 20404497 + 15 NA Intergenic Intergenic -5076 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4346 chr3L 18128429 18128483 + 15 NA Intergenic Intergenic -2667 FBgn0036778 FBgn0036778 FBtr0075135 Cyp312a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1013 chr2L 14782169 14782287 + 15 NA exon (FBgn0028867, exon 4 of 4) pseudogene-exon (FBgn0028867, exon 4 of 4) 882 FBgn0028867 FBgn0028867 FBtr0100604 CR15280 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2900 chr2R 16854005 16854059 + 15 NA Intergenic Intergenic -5618 FBgn0008636 FBgn0008636 FBtr0071556 hbn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4063 chr3L 13882639 13882693 + 15 NA exon (FBgn0264006, exon 4 of 17) protein_coding-exon (FBgn0264006, exon 4 of 17) 7795 FBgn0036382 FBgn0036382 FBtr0075755 CG13737 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5148 chr3R 8775161 8775238 + 15 NA TTS (FBgn0040493) protein_coding-TTS (FBgn0040493) -12275 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4712 chr3R 2308554 2308632 + 15 NA promoter-TSS (FBgn0037448) protein_coding-promoter-TSS (FBgn0037448) -4118 FBgn0037448 FBgn0037448 FBtr0308036 CG15186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4685 chr3R 1892353 1892432 + 15 NA Intergenic Intergenic -9133 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4254 chr3L 17070197 17070269 + 15 NA exon (FBgn0260943, exon 10 of 10) protein_coding-exon (FBgn0260943, exon 10 of 10) 21520 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_679 chr2L 10566661 10566715 + 15 NA promoter-TSS (FBgn0032268) protein_coding-promoter-TSS (FBgn0032268) -602 FBgn0032268 FBgn0032268 FBtr0080098 CG6138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2368 chr2R 7889943 7890012 + 15 NA exon (FBgn0004839, exon 6 of 7) protein_coding-exon (FBgn0004839, exon 6 of 7) 13339 FBgn0033673 FBgn0033673 FBtr0088043 CG8298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1170 chr2L 16382223 16382277 + 15 NA Intergenic Intergenic 16331 FBgn0028841 FBgn0028841 FBtr0080859 jhamt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5671 chr3R 15799797 15799881 + 15 NA exon (FBgn0051213, exon 2 of 7) protein_coding-exon (FBgn0051213, exon 2 of 7) 604 FBgn0051213 FBgn0051213 FBtr0083824 CG31213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1835 chr2L 22616006 22616083 + 15 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 28483 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5296 chr3R 11528258 11528324 + 15 NA Intergenic Intergenic -2126 FBgn0038354 FBgn0038354 FBtr0083165 CG5404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_548 chr2L 8651901 8651955 + 15 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -21224 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7190 chrX 13592541 13592595 + 15 NA intron (FBgn0052627, intron 1 of 8) protein_coding-intron (FBgn0052627, intron 1 of 9) 1873 FBgn0052627 FBgn0052627 FBtr0304972 NnaD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_593 chr2L 8862835 8862921 + 15 NA promoter-TSS (FBgn0052987) protein_coding-promoter-TSS (FBgn0052987) 102 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5504 chr3R 13835711 13835765 + 15 NA exon (FBgn0263995, exon 8 of 12) protein_coding-exon (FBgn0263995, exon 8 of 12) -9359 FBgn0000477 FBgn0000477 FBtr0083538 DNaseII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4223 chr3L 16557399 16557453 + 15 NA exon (FBgn0026061, exon 6 of 6) protein_coding-exon (FBgn0026061, exon 6 of 6) -2424 FBgn0262842 FBgn0262842 FBtr0306084 CG43206 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_457 chr2L 7100338 7100459 + 15 NA exon (FBgn0085407, exon 5 of 6) protein_coding-exon (FBgn0085407, exon 5 of 6) -15764 FBgn0031888 FBgn0031888 FBtr0079423 Pvf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_324 chr2L 4689342 4689445 + 15 NA TTS (FBgn0031621) protein_coding-TTS (FBgn0031621) 1309 FBgn0031622 FBgn0031622 FBtr0077422 CG3251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_31 chr2L 751233 751304 + 15 NA intron (FBgn0031275, intron 1 of 10) protein_coding-intron (FBgn0031275, intron 1 of 10) 659 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_788 chr2L 12359640 12359726 + 15 NA exon (FBgn0262475, exon 4 of 10) protein_coding-exon (FBgn0262475, exon 4 of 10) 3242 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1601 chr2L 21093068 21093175 + 15 NA intron (FBgn0032914, intron 1 of 2) protein_coding-intron (FBgn0032914, intron 1 of 2) 1894 FBgn0032914 FBgn0032914 FBtr0300444 CG14397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3883 chr3L 10702755 10702822 + 15 NA Intergenic Intergenic -12811 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1269 chr2L 17347457 17347537 + 15 NA Intergenic Intergenic 7171 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5569 chr3R 14514849 14514903 + 15 NA exon (FBgn0038642, exon 4 of 4) protein_coding-exon (FBgn0038642, exon 4 of 4) 3565 FBgn0038642 FBgn0038642 FBtr0083687 Muc91C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3365 chr2RHet 2274535 2274610 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5668 chr3R 15782890 15783006 + 15 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) 8756 FBgn0038756 FBgn0038756 FBtr0083823 CG4783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4024 chr3L 13196971 13197037 + 15 NA Intergenic Intergenic -7310 FBgn0052129 FBgn0052129 FBtr0075828 tRNA:CR32129 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3189 chr2RHet 601643 601709 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6880 chrUextra 332767 332838 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1703 chr2L 21959770 21959855 + 15 NA Intergenic Intergenic 33121 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_751 chr2L 11727470 11727524 + 15 NA Intergenic Intergenic -11455 FBgn0032373 FBgn0032373 FBtr0080255 Vha100-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6318 chr3R 25387712 25387842 + 15 NA intron (FBgn0000492, intron 1 of 1) protein_coding-intron (FBgn0000492, intron 1 of 1) 5668 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2978 chr2R 18232404 18232474 + 15 NA exon (FBgn0034720, exon 4 of 14) protein_coding-exon (FBgn0034720, exon 4 of 14) -3373 FBgn0034721 FBgn0034721 FBtr0071819 CG11298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5056 chr3R 7361757 7361845 + 15 NA exon (FBgn0053512, exon 4 of 6) protein_coding-exon (FBgn0053512, exon 4 of 6) 816 FBgn0053512 FBgn0053512 FBtr0300492 dpr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6077 chr3R 23143350 23143404 + 15 NA exon (FBgn0039510, exon 8 of 32) protein_coding-exon (FBgn0039510, exon 8 of 32) 4670 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2373 chr2R 8002045 8002111 + 15 NA intron (FBgn0086677, intron 1 of 2) protein_coding-intron (FBgn0086677, intron 1 of 2) 4767 FBgn0086677 FBgn0086677 FBtr0088021 jeb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1801 chr2L 22453839 22453937 + 15 NA Intergenic Intergenic 10916 FBgn0040010 FBgn0040010 FBtr0332631 CG17493 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1408 chr2L 19072298 19072413 + 15 NA intron (FBgn0032753, intron 4 of 5) protein_coding-intron (FBgn0032753, intron 4 of 5) 1791 FBgn0032753 FBgn0032753 FBtr0081173 CG17572 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3471 chr3L 1423970 1424078 + 15 NA promoter-TSS (FBgn0035218) protein_coding-promoter-TSS (FBgn0035218) -553 FBgn0035218 FBgn0035218 FBtr0072720 CG9173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1588 chr2L 20857540 20857646 + 15 NA TTS (FBgn0032895) protein_coding-TTS (FBgn0032895) 298 FBgn0032896 FBgn0032896 FBtr0081449 CG14400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3122 chr2R 20918558 20918654 + 15 NA TTS (FBgn0004055) protein_coding-TTS (FBgn0004055) -1297 FBgn0035092 FBgn0035092 FBtr0110861 Nplp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4416 chr3L 20541759 20541855 + 14 NA Intergenic Intergenic -8290 FBgn0037012 FBgn0037012 FBtr0078213 Rcd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4417 chr3L 20633176 20633230 + 14 NA exon (FBgn0037014, exon 3 of 3) protein_coding-exon (FBgn0037014, exon 3 of 3) 2904 FBgn0037014 FBgn0037014 FBtr0078243 CG13251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_562 chr2L 8760310 8760429 + 14 NA Intergenic Intergenic 8064 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5683 chr3R 15931351 15931440 + 14 NA Intergenic Intergenic 2328 FBgn0051206 FBgn0051206 FBtr0083875 CG31206 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4501 chr3L 23761882 23761951 + 14 NA Intergenic Intergenic -15415 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5168 chr3R 9149059 9149113 + 14 NA Intergenic Intergenic 10799 FBgn0038139 FBgn0038139 FBtr0100149 CG8795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6744 chrU 490816 490870 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3182 chr2RHet 529461 529526 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5161 chr3R 9033029 9033083 + 14 NA Intergenic Intergenic 7131 FBgn0038126 FBgn0038126 FBtr0082782 CG8483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_643 chr2L 9636475 9636553 + 14 NA intron (FBgn0032136, intron 1 of 19) protein_coding-intron (FBgn0032136, intron 1 of 19) 2313 FBgn0032136 FBgn0032136 FBtr0303874 CG15828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5784 chr3R 17268363 17268417 + 14 NA intron (FBgn0011278, intron 1 of 1) protein_coding-intron (FBgn0011278, intron 1 of 1) 3652 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5224 chr3R 10003688 10003746 + 14 NA exon (FBgn0011582, exon 6 of 6) protein_coding-exon (FBgn0011582, exon 6 of 6) 15286 FBgn0038210 FBgn0038210 FBtr0082894 CG3199 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3971 chr3L 12429944 12430037 + 14 NA Intergenic Intergenic -4222 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3377 chr2RHet 2362456 2362531 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5359 chr3R 12227815 12227894 + 14 NA exon (FBgn0003513, exon 2 of 8) protein_coding-exon (FBgn0003513, exon 2 of 8) 1558 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5505 chr3R 13837287 13837341 + 14 NA exon (FBgn0263995, exon 10 of 12) protein_coding-exon (FBgn0263995, exon 10 of 12) -7783 FBgn0000477 FBgn0000477 FBtr0083538 DNaseII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2842 chr2R 15885470 15885553 + 14 NA Intergenic Intergenic 2362 FBgn0050212 FBgn0050212 FBtr0086326 tRNA:CR30212 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3299 chr2RHet 1930537 1930591 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3585 chr3L 4471949 4472003 + 14 NA TTS (FBgn0052249) protein_coding-TTS (FBgn0052249) 227 FBgn0052248 FBgn0052248 FBtr0303004 CG32248 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1545 chr2L 20518370 20518424 + 14 NA Intergenic Intergenic 23291 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3278 chr2RHet 1901794 1901848 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2361 chr2R 7800273 7800327 + 14 NA promoter-TSS (FBgn0033667) protein_coding-promoter-TSS (FBgn0033667) -20 FBgn0033667 FBgn0033667 FBtr0088054 CG13183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2941 chr2R 17481833 17481888 + 14 NA Intergenic Intergenic 3969 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_465 chr2L 7171002 7171065 + 14 NA Intergenic Intergenic -11203 FBgn0031893 FBgn0031893 FBtr0113028 CG4495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2644 chr2R 12364142 12364196 + 14 NA Intergenic Intergenic 8455 FBgn0261293 FBgn0261293 FBtr0091479 CheB53b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4939 chr3R 5687302 5687356 + 14 NA intron (FBgn0037766, intron 2 of 2) protein_coding-intron (FBgn0037766, intron 2 of 2) 6513 FBgn0037766 FBgn0037766 FBtr0330082 Teh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5091 chr3R 8074170 8074233 + 14 NA Intergenic Intergenic -5708 FBgn0038008 FBgn0038008 FBtr0082561 CG3942 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2632 chr2R 12258361 12258415 + 14 NA Intergenic Intergenic -6576 FBgn0034122 FBgn0034122 FBtr0087167 CG15711 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6094 chr3R 23306487 23306556 + 14 NA TTS (FBgn0039519) protein_coding-TTS (FBgn0039519) 2122 FBgn0039519 FBgn0039519 FBtr0085183 Cyp6a18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3241 chr2RHet 1452281 1452378 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3138 chr2RHet 38810 38864 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4900 chr3R 4793950 4794033 + 14 NA Intergenic Intergenic -5308 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3982 chr3L 12584944 12585052 + 14 NA intron (FBgn0015904, intron 3 of 4) protein_coding-intron (FBgn0015904, intron 3 of 4) 11226 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4403 chr3L 20095732 20095786 + 14 NA exon (FBgn0036935, exon 1 of 5) protein_coding-exon (FBgn0036935, exon 1 of 5) 1168 FBgn0036935 FBgn0036935 FBtr0074870 CG14186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4975 chr3R 6328994 6329048 + 14 NA Intergenic Intergenic 9757 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4116 chr3L 14795266 14795333 + 14 NA promoter-TSS (FBgn0029148) protein_coding-promoter-TSS (FBgn0029148) -31 FBgn0029148 FBgn0029148 FBtr0075698 NHP2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4017 chr3L 13079156 13079277 + 14 NA TTS (FBgn0036345) protein_coding-TTS (FBgn0036345) 1173 FBgn0036345 FBgn0036345 FBtr0075892 CG17300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6349 chr3R 25531909 25531993 + 14 NA Intergenic Intergenic -8310 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4864 chr3R 4289475 4289558 + 14 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 13799 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_128 chr2L 1555314 1555406 + 14 NA exon (FBgn0261509, exon 1 of 10) protein_coding-exon (FBgn0261509, exon 1 of 10) 230 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3161 chr2RHet 373161 373215 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_949 chr2L 14446170 14446224 + 14 NA Intergenic Intergenic 4725 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1510 chr2L 20141847 20141901 + 14 NA Intergenic Intergenic -6951 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4098 chr3L 14392523 14392611 + 14 NA Intergenic Intergenic 3258 FBgn0036422 FBgn0036422 FBtr0075729 CG3868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3686 chr3L 6880200 6880254 + 14 NA Intergenic Intergenic 26837 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6105 chr3R 23416640 23416714 + 14 NA exon (FBgn0039527, exon 2 of 5) protein_coding-exon (FBgn0039527, exon 2 of 5) 2583 FBgn0039527 FBgn0039527 FBtr0085202 CG5639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5223 chr3R 9964957 9965011 + 14 NA Intergenic Intergenic -7193 FBgn0038207 FBgn0038207 FBtr0082908 CG14356 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2663 chr2R 12590119 12590173 + 14 NA intron (FBgn0050463, intron 2 of 10) protein_coding-intron (FBgn0050463, intron 3 of 11) 10943 FBgn0013763 FBgn0013763 FBtr0087111 CG5210 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4130 chr3L 15046302 15046384 + 14 NA promoter-TSS (FBgn0036468) protein_coding-promoter-TSS (FBgn0036468) 108 FBgn0263763 FBgn0263763 FBtr0310455 CG43680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1017 chr2L 14809605 14809659 + 14 NA Intergenic Intergenic -1156 FBgn0053309 FBgn0053309 FBtr0080674 CG33309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5495 chr3R 13714921 13715018 + 14 NA intron (FBgn0053547, intron 8 of 19) protein_coding-intron (FBgn0053547, intron 8 of 19) -17217 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_699 chr2L 10801191 10801312 + 14 NA promoter-TSS (FBgn0051869) protein_coding-promoter-TSS (FBgn0051869) -405 FBgn0051869 FBgn0051869 FBtr0290246 CG31869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3933 chr3L 11745696 11745750 + 14 NA TTS (FBgn0041231) protein_coding-TTS (FBgn0041231) 1318 FBgn0041231 FBgn0041231 FBtr0076118 Gr68a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6476 chr3R 27060888 27060942 + 14 NA promoter-TSS (FBgn0039833) protein_coding-promoter-TSS (FBgn0039833) 88 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2871 chr2R 16351644 16351698 + 14 NA intron (FBgn0086604, intron 5 of 19) protein_coding-intron (FBgn0086604, intron 6 of 15) -39449 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1625 chr2L 21377005 21377059 + 14 NA exon (FBgn0032945, exon 3 of 3) protein_coding-exon (FBgn0032945, exon 3 of 3) -2968 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4803 chr3R 3284033 3284087 + 14 NA Intergenic Intergenic 6278 FBgn0011998 FBgn0011998 FBtr0081536 tRNA:V3b:84Da tRNA Nup98-S2-pascual-garcia2017_R1_peak_4811 chr3R 3499874 3499928 + 14 NA intron (FBgn0051146, intron 7 of 11) protein_coding-intron (FBgn0051146, intron 7 of 11) 15930 FBgn0051146 FBgn0051146 FBtr0305969 Nlg1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2450 chr2R 9255019 9255123 + 14 NA Intergenic Intergenic 10148 FBgn0033830 FBgn0033830 FBtr0087720 CG10814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3660 chr3L 6355916 6356012 + 14 NA Intergenic Intergenic -10474 FBgn0035699 FBgn0035699 FBtr0077007 CG13300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6633 chr4 850492 850593 + 14 NA intron (FBgn0039938, intron 1 of 4) protein_coding-intron (FBgn0039938, intron 1 of 4) 4097 FBgn0039938 FBgn0039938 FBtr0089252 Sox102F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5454 chr3R 13291679 13291818 + 14 NA Intergenic Intergenic -9250 FBgn0038512 FBgn0038512 FBtr0083443 CG14330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6644 chr4 964217 964294 + 14 NA exon (FBgn0019985, exon 6 of 9) protein_coding-exon (FBgn0019985, exon 6 of 9) 6810 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2388 chr2R 8267678 8267744 + 14 NA TTS (FBgn0050042) protein_coding-TTS (FBgn0050042) 220 FBgn0033723 FBgn0033723 FBtr0087956 CG13155 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2689 chr2R 13271948 13272025 + 14 NA Intergenic Intergenic 7364 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6625 chr4 723617 723703 + 14 NA intron (FBgn0005558, intron 1 of 7) protein_coding-intron (FBgn0005558, intron 1 of 7) -2043 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3003 chr2R 18788470 18788540 + 14 NA intron (FBgn0034797, intron 1 of 11) protein_coding-intron (FBgn0034797, intron 1 of 10) 4809 FBgn0034797 FBgn0034797 FBtr0304795 nahoda protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6616 chr4 571696 571779 + 14 NA exon (FBgn0026869, exon 3 of 6) protein_coding-exon (FBgn0026869, exon 3 of 6) 6743 FBgn0264618 FBgn0264618 FBtr0333707 CR43958 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1219 chr2L 16987870 16987960 + 14 NA intron (FBgn0053179, intron 4 of 6) protein_coding-intron (FBgn0053179, intron 4 of 6) 2937 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5290 chr3R 11424602 11424656 + 14 NA Intergenic Intergenic -36561 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1360 chr2L 18271169 18271262 + 14 NA exon (FBgn0261804, exon 2 of 15) protein_coding-exon (FBgn0261804, exon 2 of 15) 4555 FBgn0261804 FBgn0261804 FBtr0303280 CG42750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5158 chr3R 8956777 8956853 + 14 NA intron (FBgn0260793, intron 3 of 3) protein_coding-intron (FBgn0038118, intron 11 of 17) 24571 FBgn0260793 FBgn0260793 FBtr0330143 2mit protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1428 chr2L 19269228 19269307 + 14 NA Intergenic Intergenic -6374 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1265 chr2L 17319236 17319309 + 14 NA Intergenic Intergenic -7452 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5615 chr3R 15222629 15222683 + 14 NA TTS (FBgn0051244) protein_coding-TTS (FBgn0051244) 1633 FBgn0051244 FBgn0051244 FBtr0083772 CG31244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7101 chrX 8261944 8261998 + 14 NA Intergenic Intergenic -17843 FBgn0030033 FBgn0030033 FBtr0071173 CG1387 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_849 chr2L 13025314 13025391 + 14 NA exon (FBgn0262160, exon 7 of 7) protein_coding-exon (FBgn0262160, exon 7 of 7) -4045 FBgn0028965 FBgn0028965 FBtr0080427 A16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4867 chr3R 4324856 4324926 + 14 NA Intergenic Intergenic 12189 FBgn0037590 FBgn0037590 FBtr0081900 Or85b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5786 chr3R 17282775 17282829 + 14 NA Intergenic Intergenic -8621 FBgn0263407 FBgn0263407 FBtr0309186 CR43453 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6460 chr3R 26952448 26952502 + 14 NA exon (FBgn0039820, exon 2 of 2) protein_coding-exon (FBgn0039820, exon 2 of 2) 602 FBgn0039820 FBgn0039820 FBtr0085736 CG15554 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4048 chr3L 13667874 13667994 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 53997 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5490 chr3R 13679944 13679998 + 14 NA intron (FBgn0261649, intron 5 of 9) protein_coding-intron (FBgn0261649, intron 5 of 9) 42705 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5618 chr3R 15249952 15250059 + 14 NA exon (FBgn0038706, exon 1 of 1) protein_coding-exon (FBgn0038706, exon 1 of 1) 916 FBgn0038706 FBgn0038706 FBtr0083770 CG3517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4874 chr3R 4379260 4379314 + 14 NA exon (FBgn0037594, exon 1 of 3) protein_coding-exon (FBgn0037594, exon 1 of 3) 957 FBgn0037594 FBgn0037594 FBtr0081872 Or85d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6640 chr4 946971 947029 + 14 NA exon (FBgn0023213, exon 4 of 16) protein_coding-exon (FBgn0023213, exon 4 of 16) 4347 FBgn0023213 FBgn0023213 FBtr0289951 eIF4G protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4557 chr3LHet 877349 877403 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1547 chr2L 20532064 20532133 + 14 NA Intergenic Intergenic -30326 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5375 chr3R 12333663 12333730 + 14 NA intron (FBgn0259244, intron 1 of 15) protein_coding-intron (FBgn0259244, intron 1 of 16) 5173 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4794 chr3R 3158343 3158397 + 14 NA Intergenic Intergenic -12421 FBgn0051496 FBgn0051496 FBtr0081582 CG31496 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2722 chr2R 13854179 13854277 + 14 NA Intergenic Intergenic -10153 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2815 chr2R 15529732 15529881 + 14 NA promoter-TSS (FBgn0034461) protein_coding-promoter-TSS (FBgn0034461) -646 FBgn0034461 FBgn0034461 FBtr0086470 CG15124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6137 chr3R 23719819 23719897 + 14 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 11707 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3853 chr3L 10282118 10282205 + 14 NA Intergenic Intergenic 15857 FBgn0036080 FBgn0036080 FBtr0076297 Or67d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6904 chrUextra 3933295 3933349 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6487 chr3R 27196688 27196776 + 14 NA TTS (FBgn0085376) protein_coding-TTS (FBgn0085376) -1417 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4282 chr3L 17325898 17325983 + 14 NA Intergenic Intergenic -3671 FBgn0036709 FBgn0036709 FBtr0075247 Or74a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4796 chr3R 3172367 3172421 + 14 NA promoter-TSS (FBgn0051501) protein_coding-promoter-TSS (FBgn0051501) -161 FBgn0051501 FBgn0051501 FBtr0081583 nxf4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1468 chr2L 19716253 19716307 + 14 NA intron (FBgn0000464, intron 12 of 18) protein_coding-intron (FBgn0000464, intron 9 of 16) -15312 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_743 chr2L 11563282 11563336 + 14 NA Intergenic Intergenic 23524 FBgn0028412 FBgn0028412 FBtr0305324 Mst33A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2674 chr2R 12877990 12878078 + 14 NA intron (FBgn0004580, intron 8 of 10) protein_coding-intron (FBgn0004580, intron 8 of 10) 8065 FBgn0050461 FBgn0050461 FBtr0100252 CG30461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7118 chrX 8825373 8825467 + 14 NA intron (FBgn0261549, intron 1 of 15) protein_coding-intron (FBgn0261549, intron 1 of 15) 6203 FBgn0261549 FBgn0261549 FBtr0302662 rdgA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5825 chr3R 18144516 18144614 + 14 NA exon (FBgn0263117, exon 3 of 8) protein_coding-exon (FBgn0263117, exon 3 of 8) 5251 FBgn0263117 FBgn0263117 FBtr0330388 CG34377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2451 chr2R 9268603 9268682 + 14 NA Intergenic Intergenic -3423 FBgn0033830 FBgn0033830 FBtr0087720 CG10814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4699 chr3R 2117013 2117086 + 14 NA promoter-TSS (FBgn0037422) protein_coding-promoter-TSS (FBgn0037422) -575 FBgn0037422 FBgn0037422 FBtr0078605 Osi13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7004 chrX 1698922 1698976 + 14 NA intron (FBgn0261548, intron 2 of 3) protein_coding-intron (FBgn0261548, intron 2 of 3) 15350 FBgn0052806 FBgn0052806 FBtr0070301 CG32806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_552 chr2L 8662953 8663070 + 14 NA exon (FBgn0011259, exon 19 of 22) protein_coding-exon (FBgn0011259, exon 19 of 22) -10141 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6186 chr3R 24120598 24120705 + 14 NA TTS (FBgn0039576) protein_coding-TTS (FBgn0039576) 825 FBgn0039576 FBgn0039576 FBtr0085279 CG17856 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2548 chr2R 10844888 10844948 + 14 NA intron (FBgn0261854, intron 1 of 9) protein_coding-intron (FBgn0261854, intron 3 of 9) -7666 FBgn0261854 FBgn0261854 FBtr0303437 aPKC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5881 chr3R 19650542 19650612 + 14 NA TTS (FBgn0262974) protein_coding-TTS (FBgn0262974) 1052 FBgn0262974 FBgn0262974 FBtr0306736 CG43285 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1943 chr2R 688146 688261 + 14 NA Intergenic Intergenic -12056 FBgn0250830 FBgn0250830 FBtr0111273 CG12547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_755 chr2L 11774899 11774953 + 14 NA Intergenic Intergenic -13535 FBgn0032374 FBgn0032374 FBtr0300370 CG14931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5483 chr3R 13560955 13561009 + 14 NA TTS (FBgn0038540) protein_coding-TTS (FBgn0038540) -1351 FBgn0038541 FBgn0038541 FBtr0083512 TyrRII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4052 chr3L 13709737 13709829 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 86717 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5072 chr3R 7694988 7695110 + 14 NA exon (FBgn0037956, exon 1 of 3) protein_coding-exon (FBgn0037956, exon 1 of 3) 134 FBgn0037956 FBgn0037956 FBtr0299594 CG6959 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5032 chr3R 7018274 7018353 + 14 NA Intergenic Intergenic -3513 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5515 chr3R 13906823 13906923 + 14 NA promoter-TSS (FBgn0038566) protein_coding-promoter-TSS (FBgn0038566) 30 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5364 chr3R 12236133 12236216 + 14 NA Intergenic Intergenic -6762 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6102 chr3R 23358992 23359046 + 14 NA exon (FBgn0039523, exon 4 of 4) protein_coding-exon (FBgn0039523, exon 4 of 4) -9200 FBgn0046887 FBgn0046887 FBtr0085186 Gr98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5758 chr3R 16803799 16803853 + 14 NA promoter-TSS (FBgn0013995) protein_coding-promoter-TSS (FBgn0013995) -179 FBgn0013995 FBgn0013995 FBtr0309202 Calx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2247 chr2R 6212827 6212898 + 14 NA exon (FBgn0261698, exon 27 of 29) protein_coding-exon (FBgn0261698, exon 27 of 29) -4857 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4726 chr3R 2524270 2524353 + 14 NA TTS (FBgn0063127) ncRNA-TTS (FBgn0063127) 1575 FBgn0063127 FBgn0063127 FBtr0091948 pncr002:3R ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4117 chr3L 14809480 14809534 + 14 NA intron (FBgn0036454, intron 2 of 7) protein_coding-intron (FBgn0036454, intron 2 of 18) 11155 FBgn0036454 FBgn0036454 FBtr0110825 CG17839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6000 chr3R 22235517 22235593 + 14 NA Intergenic Intergenic -4255 FBgn0039425 FBgn0039425 FBtr0306708 CG5432 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6055 chr3R 22832544 22832598 + 14 NA exon (FBgn0039471, exon 2 of 2) protein_coding-exon (FBgn0039471, exon 2 of 2) 206 FBgn0039471 FBgn0039471 FBtr0085077 CG6295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3869 chr3L 10596479 10596533 + 14 NA Intergenic Intergenic 20170 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5936 chr3R 21692412 21692466 + 14 NA promoter-TSS (FBgn0039380) protein_coding-promoter-TSS (FBgn0039380) -383 FBgn0039380 FBgn0039380 FBtr0301147 CG5890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4853 chr3R 4159514 4159568 + 14 NA promoter-TSS (FBgn0003129) protein_coding-promoter-TSS (FBgn0003129) -27 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6627 chr4 731580 731641 + 14 NA exon (FBgn0005558, exon 2 of 8) protein_coding-exon (FBgn0005558, exon 2 of 8) 5907 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2449 chr2R 9253114 9253168 + 14 NA Intergenic Intergenic -11168 FBgn0033828 FBgn0033828 FBtr0087721 CG17048 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5601 chr3R 15025767 15025864 + 14 NA exon (FBgn0051475, exon 3 of 4) protein_coding-exon (FBgn0051475, exon 3 of 4) -12100 FBgn0025680 FBgn0025680 FBtr0083736 cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6495 chr3R 27326797 27326871 + 14 NA intron (FBgn0039851, intron 1 of 6) protein_coding-intron (FBgn0039851, intron 1 of 6) 1873 FBgn0039851 FBgn0039851 FBtr0085790 mey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_797 chr2L 12570077 12570131 + 14 NA Intergenic Intergenic 26928 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4629 chr3R 947157 947226 + 14 NA Intergenic Intergenic -6619 FBgn0037293 FBgn0037293 FBtr0078842 CG12007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1521 chr2L 20284981 20285065 + 14 NA Intergenic Intergenic -9684 FBgn0040996 FBgn0040996 FBtr0081351 CG12617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4711 chr3R 2307559 2307649 + 14 NA promoter-TSS (FBgn0037448) protein_coding-promoter-TSS (FBgn0037448) -5107 FBgn0037448 FBgn0037448 FBtr0308036 CG15186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4059 chr3L 13777110 13777194 + 14 NA intron (FBgn0264001, intron 2 of 13) protein_coding-intron (FBgn0264001, intron 2 of 13) 19348 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_956 chr2L 14471597 14471674 + 14 NA Intergenic Intergenic -19227 FBgn0005771 FBgn0005771 FBtr0080643 noc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3931 chr3L 11708785 11708839 + 14 NA promoter-TSS (FBgn0040817) protein_coding-promoter-TSS (FBgn0040817) -427 FBgn0040817 FBgn0040817 FBtr0113334 CG14132 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5114 chr3R 8405115 8405177 + 14 NA intron (FBgn0038063, intron 1 of 6) protein_coding-intron (FBgn0038063, intron 1 of 6) -18258 FBgn0038063 FBgn0038063 FBtr0330120 Octbeta2R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5480 chr3R 13478126 13478196 + 14 NA intron (FBgn0038532, intron 2 of 7) protein_coding-intron (FBgn0038532, intron 1 of 6) -4706 FBgn0051577 FBgn0051577 FBtr0083475 tRNA:CR31577 tRNA Nup98-S2-pascual-garcia2017_R1_peak_408 chr2L 6033948 6034040 + 14 NA TTS (FBgn0025742) protein_coding-TTS (FBgn0025742) 429 FBgn0031765 FBgn0031765 FBtr0100665 CG9109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6220 chr3R 24408535 24408614 + 14 NA exon (FBgn0000659, exon 1 of 1) protein_coding-exon (FBgn0000659, exon 1 of 1) 2260 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6816 chrU 2649442 2649517 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3747 chr3L 7745202 7745256 + 14 NA intron (FBgn0052373, intron 2 of 8) protein_coding-intron (FBgn0052373, intron 1 of 7) -2280 FBgn0035817 FBgn0035817 FBtr0076810 CG7409 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6425 chr3R 26732848 26732902 + 14 NA Intergenic Intergenic -4992 FBgn0053483 FBgn0053483 FBtr0089295 CG33483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1354 chr2L 18164607 18164661 + 14 NA intron (FBgn0261804, intron 13 of 14) protein_coding-intron (FBgn0261804, intron 13 of 14) -5948 FBgn0032671 FBgn0032671 FBtr0081062 CG7200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5584 chr3R 14759734 14759815 + 14 NA intron (FBgn0261262, intron 2 of 17) protein_coding-intron (FBgn0261262, intron 2 of 18) 4856 FBgn0261262 FBgn0261262 FBtr0304686 CG42613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6807 chrU 2433136 2433190 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3754 chr3L 7949853 7949932 + 14 NA Intergenic Intergenic 8606 FBgn0041156 FBgn0041156 FBtr0076751 exex protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4389 chr3L 19397816 19397904 + 14 NA promoter-TSS (FBgn0264697) ncRNA-promoter-TSS (FBgn0264697) -779 FBgn0264697 FBgn0264697 FBtr0333868 CR43966 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3789 chr3L 8637489 8637581 + 14 NA TTS (FBgn0052029) protein_coding-TTS (FBgn0052029) 2387 FBgn0035921 FBgn0035921 FBtr0273349 CG13305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_97 chr2L 1346178 1346265 + 14 NA Intergenic Intergenic 1741 FBgn0026141 FBgn0026141 FBtr0305553 Cdlc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6721 chrU 228804 228874 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3282 chr2RHet 1907032 1907127 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_264 chr2L 4107541 4107672 + 14 NA exon (FBgn0000547, exon 8 of 9) protein_coding-exon (FBgn0000547, exon 8 of 9) -12757 FBgn0020376 FBgn0020376 FBtr0077466 Sr-CIII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1526 chr2L 20377892 20377964 + 14 NA exon (FBgn0032856, exon 5 of 6) protein_coding-exon (FBgn0032856, exon 5 of 6) -3961 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6139 chr3R 23722365 23722467 + 14 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 9149 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5777 chr3R 17215937 17215991 + 14 NA exon (FBgn0004862, exon 2 of 2) protein_coding-exon (FBgn0004862, exon 2 of 2) 1359 FBgn0004862 FBgn0004862 FBtr0084087 bap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_993 chr2L 14652002 14652085 + 14 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 35774 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5546 chr3R 14291309 14291363 + 14 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) -53983 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4688 chr3R 1965302 1965356 + 14 NA Intergenic Intergenic -11652 FBgn0263498 FBgn0263498 FBtr0309514 CR43487 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1554 chr2L 20561215 20561300 + 14 NA Intergenic Intergenic -1167 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5992 chr3R 22188847 22188919 + 14 NA Intergenic Intergenic 7673 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6769 chrU 1307812 1307866 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4351 chr3L 18188399 18188487 + 14 NA Intergenic Intergenic -6151 FBgn0036782 FBgn0036782 FBtr0310156 CG7320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6014 chr3R 22434727 22434839 + 14 NA Intergenic Intergenic -10062 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4701 chr3R 2128855 2128922 + 14 NA exon (FBgn0037424, exon 3 of 3) protein_coding-exon (FBgn0037424, exon 3 of 3) 1360 FBgn0037424 FBgn0037424 FBtr0078607 Osi15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5511 chr3R 13889241 13889295 + 14 NA Intergenic Intergenic -14185 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4690 chr3R 2032777 2032880 + 14 NA exon (FBgn0037409, exon 6 of 6) protein_coding-exon (FBgn0037409, exon 6 of 6) -2267 FBgn0037410 FBgn0037410 FBtr0078593 Osi2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6563 chr3RHet 923977 924031 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1060 chr2L 15231335 15231389 + 14 NA intron (FBgn0028516, intron 4 of 6) protein_coding-intron (FBgn0028516, intron 6 of 8) 14556 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5486 chr3R 13601853 13601907 + 14 NA exon (FBgn0262562, exon 1 of 13) protein_coding-exon (FBgn0262562, exon 1 of 13) -13677 FBgn0038542 FBgn0038542 FBtr0083532 TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_311 chr2L 4499274 4499369 + 14 NA exon (FBgn0053196, exon 66 of 82) protein_coding-exon (FBgn0053196, exon 66 of 82) -22297 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2714 chr2R 13708705 13708770 + 14 NA exon (FBgn0259211, exon 3 of 13) protein_coding-exon (FBgn0259211, exon 3 of 13) -2333 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1446 chr2L 19503222 19503292 + 14 NA TTS (FBgn0040268) protein_coding-TTS (FBgn0040268) 5089 FBgn0040268 FBgn0040268 FBtr0081246 Top3alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1215 chr2L 16939143 16939220 + 14 NA Intergenic Intergenic 6193 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2844 chr2R 15890987 15891041 + 14 NA TTS (FBgn0034480) protein_coding-TTS (FBgn0034480) 1478 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2022 chr2R 2453914 2453968 + 14 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) -32841 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2319 chr2R 7409741 7409795 + 14 NA Intergenic Intergenic 5620 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6330 chr3R 25475717 25475771 + 14 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 9962 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1685 chr2L 21870342 21870396 + 14 NA Intergenic Intergenic -23858 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4326 chr3L 17934441 17934507 + 14 NA intron (FBgn0262793, intron 1 of 1) protein_coding-intron (FBgn0262793, intron 1 of 1) 7342 FBgn0262793 FBgn0262793 FBtr0305909 CG43174 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5803 chr3R 17585967 17586042 + 14 NA exon (FBgn0259237, exon 4 of 7) protein_coding-exon (FBgn0259237, exon 4 of 7) 1508 FBgn0259237 FBgn0259237 FBtr0301691 CG42335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4968 chr3R 6199053 6199123 + 14 NA intron (FBgn0020379, intron 1 of 10) protein_coding-intron (FBgn0020379, intron 1 of 10) 4702 FBgn0020379 FBgn0020379 FBtr0305997 Rfx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6211 chr3R 24335891 24335977 + 14 NA exon (FBgn0013813, exon 35 of 47) protein_coding-exon (FBgn0013813, exon 35 of 47) 10303 FBgn0051051 FBgn0051051 FBtr0085296 CG31051 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1309 chr2L 17798248 17798333 + 14 NA exon (FBgn0262018, exon 9 of 14) protein_coding-exon (FBgn0262018, exon 9 of 14) 5878 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_845 chr2L 12981925 12981979 + 14 NA TTS (FBgn0032464) protein_coding-TTS (FBgn0032464) 3166 FBgn0032464 FBgn0032464 FBtr0080421 Vha68-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_976 chr2L 14596696 14596778 + 14 NA Intergenic Intergenic -2122 FBgn0028912 FBgn0028912 FBtr0080646 tRNA:P:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_655 chr2L 9865917 9866029 + 14 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 17684 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2625 chr2R 12137218 12137272 + 14 NA promoter-TSS (FBgn0261612) protein_coding-promoter-TSS (FBgn0261612) -7806 FBgn0034099 FBgn0034099 FBtr0087188 CG15708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_607 chr2L 8907212 8907290 + 14 NA intron (FBgn0085427, intron 1 of 11) protein_coding-intron (FBgn0085427, intron 1 of 10) 8447 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5299 chr3R 11560304 11560358 + 14 NA Intergenic Intergenic 2863 FBgn0085303 FBgn0085303 FBtr0112469 CG34274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4106 chr3L 14489964 14490030 + 14 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) -20928 FBgn0036426 FBgn0036426 FBtr0290282 CG9592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4149 chr3L 15377093 15377193 + 14 NA Intergenic Intergenic -23789 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2077 chr2R 3613996 3614071 + 14 NA promoter-TSS (FBgn0042135) protein_coding-promoter-TSS (FBgn0042135) 9091 FBgn0042135 FBgn0042135 FBtr0330328 CG18812 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6729 chrU 251911 252005 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7196 chrX 13909471 13909562 + 14 NA promoter-TSS (FBgn0011976) tRNA-promoter-TSS (FBgn0011976) 38 FBgn0011976 FBgn0011976 FBtr0073859 tRNA:S4:12Eb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4915 chr3R 5127621 5127698 + 14 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -19833 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5571 chr3R 14538334 14538388 + 14 NA exon (FBgn0015323, exon 2 of 2) protein_coding-exon (FBgn0015323, exon 2 of 2) 7105 FBgn0000303 FBgn0000303 FBtr0089368 Cha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2354 chr2R 7716342 7716409 + 13 NA exon (FBgn0033654, exon 4 of 4) protein_coding-exon (FBgn0033654, exon 4 of 4) 3505 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2598 chr2R 11725947 11726042 + 13 NA Intergenic Intergenic -3434 FBgn0003130 FBgn0003130 FBtr0087311 Poxn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6642 chr4 960315 960394 + 13 NA intron (FBgn0019985, intron 2 of 5) protein_coding-intron (FBgn0019985, intron 2 of 8) 2909 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4405 chr3L 20151546 20151621 + 13 NA exon (FBgn0261556, exon 5 of 15) protein_coding-exon (FBgn0261556, exon 5 of 15) -17876 FBgn0036942 FBgn0036942 FBtr0074864 CG7328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5330 chr3R 11898808 11898898 + 13 NA exon (FBgn0026059, exon 13 of 18) protein_coding-exon (FBgn0026059, exon 13 of 18) 3033 FBgn0026059 FBgn0026059 FBtr0303845 Mhcl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_885 chr2L 13737381 13737475 + 13 NA TTS (FBgn0051813) protein_coding-TTS (FBgn0051813) 1288 FBgn0051813 FBgn0051813 FBtr0080531 CG31813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_125 chr2L 1534789 1534866 + 13 NA Intergenic Intergenic 12136 FBgn0026397 FBgn0026397 FBtr0077874 Or22b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4036 chr3L 13450639 13450732 + 13 NA promoter-TSS (FBgn0036367) protein_coding-promoter-TSS (FBgn0036367) -347 FBgn0036367 FBgn0036367 FBtr0075824 CG10116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4819 chr3R 3686964 3687034 + 13 NA exon (FBgn0037525, exon 13 of 15) protein_coding-exon (FBgn0037525, exon 13 of 15) 25456 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1445 chr2L 19471135 19471209 + 13 NA exon (FBgn0264391, exon 1 of 1) ncRNA-exon (FBgn0264391, exon 1 of 1) 455 FBgn0264391 FBgn0264391 FBtr0332319 CR43839 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_452 chr2L 6982614 6982690 + 13 NA exon (FBgn0031879, exon 7 of 12) protein_coding-exon (FBgn0031879, exon 7 of 12) 10409 FBgn0262616 FBgn0262616 FBtr0305347 CR43142 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3712 chr3L 7040883 7040973 + 13 NA promoter-TSS (FBgn0260660) protein_coding-promoter-TSS (FBgn0260660) -18486 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2934 chr2R 17453335 17453389 + 13 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 10178 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6823 chrU 3230891 3230994 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3340 chr2RHet 2160288 2160386 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3814 chr3L 9035535 9035611 + 13 NA intron (FBgn0028789, intron 2 of 4) protein_coding-intron (FBgn0028789, intron 2 of 4) 644 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1953 chr2R 833438 833527 + 13 NA Intergenic Intergenic -3690 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_767 chr2L 11945906 11945990 + 13 NA exon (FBgn0005664, exon 2 of 2) protein_coding-exon (FBgn0005664, exon 2 of 2) 1807 FBgn0005664 FBgn0005664 FBtr0080281 Cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1574 chr2L 20716397 20716489 + 13 NA Intergenic Intergenic -2027 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5996 chr3R 22196983 22197065 + 13 NA Intergenic Intergenic 15814 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4185 chr3L 16014309 16014363 + 13 NA exon (FBgn0264600, exon 1 of 1) protein_coding-exon (FBgn0264600, exon 1 of 1) 270 FBgn0264600 FBgn0264600 FBtr0333620 CG43949 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6756 chrU 1090198 1090300 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_619 chr2L 9055309 9055386 + 13 NA exon (FBgn0051708, exon 7 of 10) protein_coding-exon (FBgn0051708, exon 7 of 10) 15815 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6177 chr3R 24046489 24046624 + 13 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 42788 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2775 chr2R 14763668 14763796 + 13 NA Intergenic Intergenic -2167 FBgn0034408 FBgn0034408 FBtr0086569 sano protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1591 chr2L 20982587 20982656 + 13 NA intron (FBgn0250867, intron 5 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -13654 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding