PeakID (cmd=annotatePeaks.pl FLAG-S2-jox2017_R1_peaks.narrowPeak dm3.fa -gid -gtf Drosophila_melanogaster.BDGP5.78.chr.gtf -cpu 6) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type FLAG-S2-jox2017_R1_peak_374 chrUextra 27346673 27347372 + 1559 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_271 chrUextra 2684432 2684923 + 1464 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_281 chrUextra 5223966 5224523 + 1182 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_287 chrUextra 7039311 7039798 + 1067 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_297 chrUextra 9036998 9037515 + 1048 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_279 chrUextra 3809272 3809832 + 962 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_376 chrUextra 27485275 27485619 + 826 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_291 chrUextra 8133340 8133836 + 574 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_327 chrUextra 17025990 17026312 + 571 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_99 chr2R 16772047 16772312 + 536 NA exon (FBgn0015524, exon 6 of 6) protein_coding-exon (FBgn0015524, exon 6 of 6) 4744 FBgn0034558 FBgn0034558 FBtr0304717 CG9236 protein_coding FLAG-S2-jox2017_R1_peak_275 chrUextra 3094444 3094776 + 495 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_75 chr2R 7829068 7829317 + 476 NA intron (FBgn0033668, intron 1 of 9) protein_coding-intron (FBgn0033668, intron 1 of 8) 2203 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding FLAG-S2-jox2017_R1_peak_332 chrUextra 18119383 18119760 + 463 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_338 chrUextra 19603817 19604125 + 440 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_490 chrX 4593488 4593684 + 390 NA TTS (FBgn0011760) protein_coding-TTS (FBgn0011760) -2810 FBgn0028325 FBgn0028325 FBtr0070711 l(1)G0334 protein_coding FLAG-S2-jox2017_R1_peak_55 chr2R 4129145 4129362 + 383 NA Intergenic Intergenic 3889 FBgn0013726 FBgn0013726 FBtr0088793 pnut protein_coding FLAG-S2-jox2017_R1_peak_309 chrUextra 11425887 11426358 + 373 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_511 chrX 16456405 16456654 + 373 NA exon (FBgn0030758, exon 2 of 2) protein_coding-exon (FBgn0030758, exon 2 of 2) -2473 FBgn0011826 FBgn0011826 FBtr0074294 Pp2B-14D protein_coding FLAG-S2-jox2017_R1_peak_307 chrUextra 11242087 11242311 + 370 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_295 chrUextra 8511008 8511419 + 341 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_353 chrUextra 24365699 24366005 + 337 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_498 chrX 7584822 7585065 + 331 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) 4008 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding FLAG-S2-jox2017_R1_peak_274 chrUextra 3080790 3081242 + 325 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_293 chrUextra 8455396 8455763 + 315 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_277 chrUextra 3204682 3204991 + 315 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_92 chr2R 13949471 13949722 + 305 NA promoter-TSS (FBgn0085415) protein_coding-promoter-TSS (FBgn0085415) -613 FBgn0085415 FBgn0085415 FBtr0112627 CG34386 protein_coding FLAG-S2-jox2017_R1_peak_341 chrUextra 22164622 22164968 + 302 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_312 chrUextra 12442321 12442695 + 296 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_268 chrU 9151131 9151457 + 295 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_188 chr3R 1108618 1108830 + 292 NA exon (FBgn0013576, exon 1 of 5) protein_coding-exon (FBgn0013576, exon 1 of 5) -5167 FBgn0051538 FBgn0051538 FBtr0078819 CG31538 protein_coding FLAG-S2-jox2017_R1_peak_285 chrUextra 6346386 6346804 + 290 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_305 chrUextra 10241370 10241727 + 289 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_22 chr2L 8566356 8566605 + 279 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -4408 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA FLAG-S2-jox2017_R1_peak_328 chrUextra 17373702 17374010 + 262 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_185 chr3R 845247 845430 + 255 NA Intergenic Intergenic -8585 FBgn0037292 FBgn0037292 FBtr0301312 CG2022 protein_coding FLAG-S2-jox2017_R1_peak_10 chr2L 4811748 4811984 + 244 NA Intergenic Intergenic -1143 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding FLAG-S2-jox2017_R1_peak_440 chrUextra 28746040 28746309 + 232 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_158 chr3L 16428625 16428874 + 232 NA intron (FBgn0261799, intron 1 of 4) protein_coding-intron (FBgn0053158, intron 3 of 5) 16052 FBgn0053158 FBgn0053158 FBtr0075390 CG33158 protein_coding FLAG-S2-jox2017_R1_peak_260 chr3RHet 2136543 2136769 + 226 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_330 chrUextra 17985565 17985854 + 223 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_267 chrU 9143003 9143249 + 219 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_142 chr3L 10849667 10849880 + 215 NA Intergenic Intergenic -1731 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding FLAG-S2-jox2017_R1_peak_482 chrX 3347148 3347395 + 213 NA Intergenic Intergenic 7002 FBgn0029659 FBgn0029659 FBtr0331608 CG16782 protein_coding FLAG-S2-jox2017_R1_peak_64 chr2R 5911387 5911633 + 207 NA intron (FBgn0022382, intron 2 of 9) protein_coding-intron (FBgn0022382, intron 2 of 9) 2037 FBgn0022382 FBgn0022382 FBtr0112902 Pka-R2 protein_coding FLAG-S2-jox2017_R1_peak_494 chrX 6627659 6627800 + 205 NA intron (FBgn0263415, intron 1 of 1) protein_coding-intron (FBgn0029896, intron 1 of 3) 979 FBgn0263415 FBgn0263415 FBtr0309201 CR43461 ncRNA FLAG-S2-jox2017_R1_peak_393 chrUextra 28219869 28220222 + 204 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_286 chrUextra 6950149 6950438 + 200 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_29 chr2L 13322052 13322296 + 198 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) 8947 FBgn0264308 FBgn0264308 FBtr0331504 CG43778 protein_coding FLAG-S2-jox2017_R1_peak_512 chrX 16527710 16527959 + 194 NA intron (FBgn0026181, intron 2 of 10) protein_coding-intron (FBgn0026181, intron 2 of 10) -1566 FBgn0030764 FBgn0030764 FBtr0074287 CG9777 protein_coding FLAG-S2-jox2017_R1_peak_208 chr3R 9843432 9843660 + 188 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 8135 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding FLAG-S2-jox2017_R1_peak_235 chr3R 17415528 17415720 + 186 NA intron (FBgn0013984, intron 2 of 12) protein_coding-intron (FBgn0013984, intron 2 of 12) 289 FBgn0013984 FBgn0013984 FBtr0290232 InR protein_coding FLAG-S2-jox2017_R1_peak_4 chr2L 2376202 2376374 + 185 NA promoter-TSS (FBgn0031420) protein_coding-promoter-TSS (FBgn0031420) 447 FBgn0031420 FBgn0031420 FBtr0331437 CG9866 protein_coding FLAG-S2-jox2017_R1_peak_357 chrUextra 25124577 25124842 + 185 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_503 chrX 10629738 10629921 + 180 NA intron (FBgn0052676, intron 1 of 3) protein_coding-intron (FBgn0052676, intron 1 of 3) -8706 FBgn0003204 FBgn0003204 FBtr0071496 ras protein_coding FLAG-S2-jox2017_R1_peak_174 chr3L 22324302 22324483 + 179 NA TTS (FBgn0052450) protein_coding-TTS (FBgn0052450) 1514 FBgn0052450 FBgn0052450 FBtr0078501 CG32450 protein_coding FLAG-S2-jox2017_R1_peak_190 chr3R 1526833 1527014 + 169 NA intron (FBgn0261261, intron 3 of 9) protein_coding-intron (FBgn0261261, intron 3 of 9) -1452 FBgn0261261 FBgn0261261 FBtr0302090 plx protein_coding FLAG-S2-jox2017_R1_peak_398 chrUextra 28342783 28343033 + 168 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_368 chrUextra 26582219 26582469 + 167 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_322 chrUextra 15572696 15572944 + 166 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_73 chr2R 7550346 7550524 + 165 NA intron (FBgn0044020, intron 3 of 3) protein_coding-intron (FBgn0044020, intron 2 of 2) -2295 FBgn0011916 FBgn0011916 FBtr0088086 tRNA:M2:48Bb tRNA FLAG-S2-jox2017_R1_peak_350 chrUextra 23887278 23887417 + 163 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_454 chrUextra 28878742 28879008 + 161 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_435 chrUextra 28734832 28735150 + 161 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_109 chr2RHet 1 294 + 160 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_317 chrUextra 13674390 13674687 + 152 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_141 chr3L 10786730 10786907 + 152 NA Intergenic Intergenic -7472 FBgn0036102 FBgn0036102 FBtr0076266 CG12523 protein_coding FLAG-S2-jox2017_R1_peak_23 chr2L 9731505 9731661 + 149 NA TTS (FBgn0032139) protein_coding-TTS (FBgn0032139) 1643 FBgn0032139 FBgn0032139 FBtr0079863 CG13116 protein_coding FLAG-S2-jox2017_R1_peak_417 chrUextra 28583479 28583809 + 149 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_262 chrU 2149631 2149882 + 143 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_319 chrUextra 14301904 14302161 + 143 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_358 chrUextra 25505516 25505789 + 142 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_306 chrUextra 10890799 10891126 + 141 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_519 chrX 20223607 20223754 + 137 NA Intergenic Intergenic 23869 FBgn0031103 FBgn0031103 FBtr0077332 CG12679 protein_coding FLAG-S2-jox2017_R1_peak_505 chrX 11580266 11580471 + 136 NA intron (FBgn0014133, intron 3 of 6) protein_coding-intron (FBgn0014133, intron 3 of 5) 7340 FBgn0014133 FBgn0014133 FBtr0073526 bif protein_coding FLAG-S2-jox2017_R1_peak_269 chrU 9934791 9935040 + 136 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_183 chr3R 627791 628006 + 133 NA promoter-TSS (FBgn0260794) protein_coding-promoter-TSS (FBgn0260794) 9885 FBgn0260794 FBgn0260794 FBtr0303915 ctrip protein_coding FLAG-S2-jox2017_R1_peak_443 chrUextra 28804637 28804879 + 131 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_161 chr3L 16923742 16923913 + 131 NA TTS (FBgn0036678) protein_coding-TTS (FBgn0036678) -3293 FBgn0036677 FBgn0036677 FBtr0075307 CG13023 protein_coding FLAG-S2-jox2017_R1_peak_487 chrX 4453386 4453587 + 131 NA exon (FBgn0029716, exon 1 of 1) protein_coding-exon (FBgn0029716, exon 1 of 1) 1381 FBgn0029716 FBgn0029716 FBtr0070679 CG3546 protein_coding FLAG-S2-jox2017_R1_peak_37 chr2L 17243200 17243413 + 130 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 3947 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding FLAG-S2-jox2017_R1_peak_352 chrUextra 24282098 24282393 + 130 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_391 chrUextra 28172171 28172419 + 128 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_100 chr2R 16885578 16885781 + 128 NA intron (FBgn0034570, intron 1 of 6) protein_coding-intron (FBgn0034570, intron 1 of 6) 1954 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding FLAG-S2-jox2017_R1_peak_510 chrX 16041757 16042064 + 128 NA exon (FBgn0042650, exon 1 of 4) protein_coding-exon (FBgn0042650, exon 1 of 4) -23545 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding FLAG-S2-jox2017_R1_peak_333 chrUextra 18286312 18286559 + 127 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_355 chrUextra 24405961 24406210 + 126 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_264 chrU 2769070 2769328 + 126 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_326 chrUextra 16632118 16632364 + 121 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_436 chrUextra 28735872 28736128 + 119 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_259 chr3RHet 2107097 2107312 + 115 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_69 chr2R 6241216 6241442 + 115 NA promoter-TSS (FBgn0262790) protein_coding-promoter-TSS (FBgn0262790) 456 FBgn0250840 FBgn0250840 FBtr0305904 CG12907 protein_coding FLAG-S2-jox2017_R1_peak_273 chrUextra 3022865 3023099 + 115 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_415 chrUextra 28582578 28582720 + 115 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_479 chrUextra 28991319 28991553 + 114 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_370 chrUextra 27077273 27077519 + 113 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_314 chrUextra 13217356 13217523 + 112 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_437 chrUextra 28737222 28737373 + 111 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_289 chrUextra 7470331 7470680 + 111 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_240 chr3R 19699671 19699874 + 109 NA intron (FBgn0025574, intron 2 of 9) protein_coding-intron (FBgn0025574, intron 2 of 9) -14420 FBgn0004185 FBgn0004185 FBtr0084528 snRNA:U1:95Ca snRNA FLAG-S2-jox2017_R1_peak_336 chrUextra 19267850 19268074 + 107 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_133 chr3L 8418278 8418428 + 106 NA exon (FBgn0020224, exon 1 of 5) protein_coding-exon (FBgn0020224, exon 1 of 5) 299 FBgn0020224 FBgn0020224 FBtr0076614 Cbl protein_coding FLAG-S2-jox2017_R1_peak_266 chrU 7316198 7316337 + 106 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_377 chrUextra 27757087 27757297 + 105 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_422 chrUextra 28628679 28628922 + 104 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_316 chrUextra 13457168 13457423 + 104 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_344 chrUextra 22459650 22459887 + 103 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_412 chrUextra 28575403 28575611 + 102 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_225 chr3R 14839810 14840025 + 102 NA intron (FBgn0026239, intron 4 of 4) protein_coding-intron (FBgn0026239, intron 4 of 4) 9827 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding FLAG-S2-jox2017_R1_peak_451 chrUextra 28839926 28840167 + 101 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_373 chrUextra 27315957 27316197 + 101 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_323 chrUextra 15907569 15907805 + 101 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_447 chrUextra 28821454 28821765 + 101 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_481 chrX 1519455 1519703 + 101 NA intron (FBgn0000210, intron 3 of 8) protein_coding-intron (FBgn0000210, intron 2 of 7) -7391 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding FLAG-S2-jox2017_R1_peak_414 chrUextra 28579970 28580210 + 100 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_320 chrUextra 14369225 14369468 + 98 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_192 chr3R 2242422 2242609 + 98 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 9936 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding FLAG-S2-jox2017_R1_peak_243 chr3R 20525099 20525238 + 97 NA intron (FBgn0003429, intron 15 of 22) protein_coding-intron (FBgn0003429, intron 16 of 24) -15338 FBgn0039217 FBgn0039217 FBtr0084687 CG13627 protein_coding FLAG-S2-jox2017_R1_peak_349 chrUextra 23704242 23704715 + 97 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_432 chrUextra 28689427 28689592 + 96 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_302 chrUextra 9985931 9986171 + 96 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_288 chrUextra 7328772 7329002 + 95 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_471 chrUextra 28953169 28953415 + 94 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_86 chr2R 11024141 11024290 + 94 NA intron (FBgn0015371, intron 1 of 5) protein_coding-intron (FBgn0015371, intron 1 of 4) 8809 FBgn0262954 FBgn0262954 FBtr0112379 Rpb12 protein_coding FLAG-S2-jox2017_R1_peak_44 chr2L 19549448 19549614 + 94 NA promoter-TSS (FBgn0041180) protein_coding-promoter-TSS (FBgn0041180) 1024 FBgn0041180 FBgn0041180 FBtr0331329 TepIV protein_coding FLAG-S2-jox2017_R1_peak_465 chrUextra 28929793 28930038 + 94 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_173 chr3L 21740013 21740194 + 93 NA exon (FBgn0037130, exon 7 of 8) protein_coding-exon (FBgn0037130, exon 7 of 8) -2734 FBgn0037129 FBgn0037129 FBtr0078452 CG14565 protein_coding FLAG-S2-jox2017_R1_peak_421 chrUextra 28618058 28618300 + 93 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_444 chrUextra 28816096 28816320 + 93 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_20 chr2L 6794142 6794287 + 93 NA intron (FBgn0015777, intron 1 of 6) protein_coding-intron (FBgn0015777, intron 3 of 7) 3980 FBgn0015777 FBgn0015777 FBtr0100381 nrv2 protein_coding FLAG-S2-jox2017_R1_peak_98 chr2R 16664659 16664849 + 93 NA promoter-TSS (FBgn0263848) protein_coding-promoter-TSS (FBgn0263848) 500 FBgn0263849 FBgn0263849 FBtr0321316 CG43710 protein_coding FLAG-S2-jox2017_R1_peak_365 chrUextra 26311051 26311295 + 92 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_294 chrUextra 8459245 8459488 + 92 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_419 chrUextra 28604063 28604332 + 92 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_492 chrX 5411057 5411281 + 89 NA promoter-TSS (FBgn0029771) protein_coding-promoter-TSS (FBgn0029771) -125 FBgn0029771 FBgn0029771 FBtr0070780 CG12730 protein_coding FLAG-S2-jox2017_R1_peak_42 chr2L 18629221 18629383 + 89 NA intron (FBgn0032694, intron 1 of 2) protein_coding-intron (FBgn0032694, intron 1 of 3) 12045 FBgn0032694 FBgn0032694 FBtr0329972 MESR3 protein_coding FLAG-S2-jox2017_R1_peak_499 chrX 7817232 7817453 + 89 NA exon (FBgn0029979, exon 4 of 4) protein_coding-exon (FBgn0029979, exon 4 of 4) 2900 FBgn0260858 FBgn0260858 FBtr0071093 Ykt6 protein_coding FLAG-S2-jox2017_R1_peak_485 chrX 3673818 3673999 + 89 NA promoter-TSS (FBgn0086899) protein_coding-promoter-TSS (FBgn0086899) 2419 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA FLAG-S2-jox2017_R1_peak_452 chrUextra 28855755 28855992 + 88 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_217 chr3R 12795355 12795525 + 88 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -5486 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding FLAG-S2-jox2017_R1_peak_395 chrUextra 28228318 28228559 + 87 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_460 chrUextra 28901972 28902214 + 87 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_405 chrUextra 28499003 28499184 + 86 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_70 chr2R 6452436 6452580 + 86 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 7115 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding FLAG-S2-jox2017_R1_peak_210 chr3R 10204797 10204965 + 86 NA Intergenic Intergenic 2540 FBgn0038225 FBgn0038225 FBtr0082940 soti protein_coding FLAG-S2-jox2017_R1_peak_382 chrUextra 27955455 27955694 + 85 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_339 chrUextra 20554765 20555022 + 85 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_331 chrUextra 18018529 18018853 + 85 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_413 chrUextra 28575666 28575829 + 85 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_159 chr3L 16579431 16579667 + 84 NA promoter-TSS (FBgn0052163) protein_coding-promoter-TSS (FBgn0052163) 608 FBgn0036643 FBgn0036643 FBtr0075365 Syx8 protein_coding FLAG-S2-jox2017_R1_peak_473 chrUextra 28970532 28970757 + 84 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_81 chr2R 9579247 9579393 + 83 NA exon (FBgn0033865, exon 2 of 2) protein_coding-exon (FBgn0033865, exon 2 of 2) 1554 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding FLAG-S2-jox2017_R1_peak_214 chr3R 11925483 11925623 + 83 NA intron (FBgn0010379, intron 1 of 6) protein_coding-intron (FBgn0010379, intron 1 of 6) 615 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding FLAG-S2-jox2017_R1_peak_324 chrUextra 15996413 15996626 + 83 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_366 chrUextra 26370683 26370915 + 83 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_335 chrUextra 19108667 19108913 + 82 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_280 chrUextra 4202889 4203132 + 82 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_518 chrX 19791521 19791667 + 80 NA intron (FBgn0052529, intron 1 of 5) protein_coding-intron (FBgn0052529, intron 4 of 8) -7501 FBgn0086782 FBgn0086782 FBtr0074802 amn protein_coding FLAG-S2-jox2017_R1_peak_502 chrX 10068915 10069073 + 80 NA intron (FBgn0264503, intron 1 of 3) protein_coding-intron (FBgn0264503, intron 1 of 3) 16527 FBgn0264503 FBgn0264503 FBtr0332934 CG43902 protein_coding FLAG-S2-jox2017_R1_peak_457 chrUextra 28886589 28886816 + 80 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_284 chrUextra 5832187 5832387 + 79 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_438 chrUextra 28740091 28740329 + 79 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_151 chr3L 13950739 13950879 + 79 NA intron (FBgn0052137, intron 2 of 6) protein_coding-intron (FBgn0052137, intron 2 of 6) 6993 FBgn0025874 FBgn0025874 FBtr0333030 Meics protein_coding FLAG-S2-jox2017_R1_peak_130 chr3L 6736789 6737002 + 78 NA promoter-TSS (FBgn0261934) protein_coding-promoter-TSS (FBgn0261934) -631 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding FLAG-S2-jox2017_R1_peak_206 chr3R 9465855 9465994 + 78 NA exon (FBgn0263396, exon 5 of 5) protein_coding-exon (FBgn0263396, exon 5 of 5) 6102 FBgn0263396 FBgn0263396 FBtr0082854 sqd protein_coding FLAG-S2-jox2017_R1_peak_119 chr3L 2719139 2719278 + 78 NA TTS (FBgn0052296) protein_coding-TTS (FBgn0052296) -7518 FBgn0264606 FBgn0264606 FBtr0333631 CG43955 protein_coding FLAG-S2-jox2017_R1_peak_372 chrUextra 27225240 27225399 + 78 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_408 chrUextra 28551628 28551878 + 78 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_207 chr3R 9809535 9809680 + 78 NA promoter-TSS (FBgn0264493) protein_coding-promoter-TSS (FBgn0264493) 12152 FBgn0263414 FBgn0263414 FBtr0309198 CR43460 ncRNA FLAG-S2-jox2017_R1_peak_313 chrUextra 12698845 12699084 + 77 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_347 chrUextra 23067261 23067511 + 77 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_476 chrUextra 28981820 28982051 + 77 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_5 chr2L 3047096 3047240 + 76 NA TTS (FBgn0263847) ncRNA-TTS (FBgn0263847) 422 FBgn0263847 FBgn0263847 FBtr0321322 CR43708 ncRNA FLAG-S2-jox2017_R1_peak_126 chr3L 4225777 4225972 + 76 NA promoter-TSS (FBgn0001257) protein_coding-promoter-TSS (FBgn0001257) 1428 FBgn0001257 FBgn0001257 FBtr0073250 ImpL2 protein_coding FLAG-S2-jox2017_R1_peak_453 chrUextra 28858965 28859205 + 75 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_200 chr3R 5926321 5926467 + 74 NA promoter-TSS (FBgn0262459) pre_miRNA-promoter-TSS (FBgn0262459) -280 FBgn0262459 FBgn0262459 FBtr0304500 mir-34 pre_miRNA FLAG-S2-jox2017_R1_peak_162 chr3L 17343454 17343594 + 74 NA promoter-TSS (FBgn0036713) protein_coding-promoter-TSS (FBgn0036713) -758 FBgn0036713 FBgn0036713 FBtr0075241 Mip protein_coding FLAG-S2-jox2017_R1_peak_143 chr3L 10891117 10891275 + 74 NA exon (FBgn0036111, exon 1 of 4) protein_coding-exon (FBgn0036111, exon 1 of 4) 1027 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding FLAG-S2-jox2017_R1_peak_120 chr3L 2766203 2766342 + 74 NA promoter-TSS (FBgn0035370) protein_coding-promoter-TSS (FBgn0035370) -727 FBgn0035370 FBgn0035370 FBtr0072969 CG1240 protein_coding FLAG-S2-jox2017_R1_peak_43 chr2L 19398898 19399076 + 74 NA promoter-TSS (FBgn0032775) protein_coding-promoter-TSS (FBgn0032775) -495 FBgn0032775 FBgn0032775 FBtr0300822 CG17544 protein_coding FLAG-S2-jox2017_R1_peak_68 chr2R 6190157 6190298 + 74 NA promoter-TSS (FBgn0033504) protein_coding-promoter-TSS (FBgn0033504) 7049 FBgn0028426 FBgn0028426 FBtr0088360 JhI-1 protein_coding FLAG-S2-jox2017_R1_peak_441 chrUextra 28779973 28780201 + 73 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_52 chr2R 1934691 1934850 + 73 NA promoter-TSS (FBgn0085240) protein_coding-promoter-TSS (FBgn0085240) 95 FBgn0085240 FBgn0085240 FBtr0112404 CG34211 protein_coding FLAG-S2-jox2017_R1_peak_79 chr2R 8304926 8305096 + 73 NA exon (FBgn0033732, exon 2 of 2) protein_coding-exon (FBgn0033732, exon 2 of 2) 1051 FBgn0033732 FBgn0033732 FBtr0087925 CG13157 protein_coding FLAG-S2-jox2017_R1_peak_359 chrUextra 25557722 25557866 + 72 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_27 chr2L 12127570 12127753 + 72 NA exon (FBgn0032414, exon 5 of 6) protein_coding-exon (FBgn0032414, exon 5 of 6) 5706 FBgn0032415 FBgn0032415 FBtr0080360 rho-6 protein_coding FLAG-S2-jox2017_R1_peak_110 chr2RHet 3065612 3065771 + 72 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_71 chr2R 7116170 7116312 + 71 NA intron (FBgn0050021, intron 4 of 7) protein_coding-intron (FBgn0050021, intron 5 of 8) 3815 FBgn0050021 FBgn0050021 FBtr0114570 metro protein_coding FLAG-S2-jox2017_R1_peak_250 chr3R 23251833 23252036 + 71 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 11270 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding FLAG-S2-jox2017_R1_peak_480 chrUextra 28994785 28995027 + 71 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_222 chr3R 14075051 14075243 + 71 NA TTS (FBgn0020238) protein_coding-TTS (FBgn0020238) -1689 FBgn0038589 FBgn0038589 FBtr0083569 CG18598 protein_coding FLAG-S2-jox2017_R1_peak_59 chr2R 4530613 4530766 + 71 NA Intergenic Intergenic -6451 FBgn0003892 FBgn0003892 FBtr0089427 ptc protein_coding FLAG-S2-jox2017_R1_peak_276 chrUextra 3142588 3142727 + 71 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_72 chr2R 7254011 7254196 + 70 NA promoter-TSS (FBgn0033627) protein_coding-promoter-TSS (FBgn0033627) -1681 FBgn0033627 FBgn0033627 FBtr0088129 CG13204 protein_coding FLAG-S2-jox2017_R1_peak_67 chr2R 5989224 5989400 + 70 NA intron (FBgn0004907, intron 1 of 6) protein_coding-intron (FBgn0004907, intron 1 of 6) -2221 FBgn0033485 FBgn0033485 FBtr0088425 RpLP0-like protein_coding FLAG-S2-jox2017_R1_peak_233 chr3R 17267666 17267808 + 70 NA exon (FBgn0011278, exon 2 of 2) protein_coding-exon (FBgn0011278, exon 2 of 2) 4305 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding FLAG-S2-jox2017_R1_peak_501 chrX 8551221 8551416 + 70 NA Intergenic Intergenic -6604 FBgn0004102 FBgn0004102 FBtr0331305 oc protein_coding FLAG-S2-jox2017_R1_peak_478 chrUextra 28986742 28986887 + 70 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_504 chrX 10645157 10645299 + 69 NA exon (FBgn0030230, exon 3 of 5) protein_coding-exon (FBgn0030230, exon 3 of 5) -6290 FBgn0052676 FBgn0052676 FBtr0071503 CG32676 protein_coding FLAG-S2-jox2017_R1_peak_255 chr3R 25737873 25738041 + 69 NA TTS (FBgn0039722) protein_coding-TTS (FBgn0039722) 2111 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding FLAG-S2-jox2017_R1_peak_304 chrUextra 10240807 10240965 + 69 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_496 chrX 7103364 7103503 + 69 NA intron (FBgn0029939, intron 1 of 3) protein_coding-intron (FBgn0029939, intron 2 of 5) 13371 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding FLAG-S2-jox2017_R1_peak_439 chrUextra 28743201 28743669 + 68 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_272 chrUextra 2900689 2900929 + 68 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_49 chr2L 22320828 22320986 + 68 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -19715 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene FLAG-S2-jox2017_R1_peak_166 chr3L 19852334 19852479 + 68 NA exon (FBgn0020389, exon 4 of 5) protein_coding-exon (FBgn0020389, exon 4 of 5) 11772 FBgn0262518 FBgn0262518 FBtr0308832 Rab8 protein_coding FLAG-S2-jox2017_R1_peak_507 chrX 13487753 13487893 + 68 NA TTS (FBgn0086674) protein_coding-TTS (FBgn0086674) 8713 FBgn0004169 FBgn0004169 FBtr0073853 up protein_coding FLAG-S2-jox2017_R1_peak_301 chrUextra 9848877 9849134 + 68 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_94 chr2R 14687962 14688101 + 68 NA intron (FBgn0010651, intron 1 of 3) protein_coding-intron (FBgn0010651, intron 2 of 4) 1873 FBgn0010651 FBgn0010651 FBtr0086635 l(2)08717 protein_coding FLAG-S2-jox2017_R1_peak_394 chrUextra 28220292 28220438 + 67 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_517 chrX 19531953 19532092 + 67 NA promoter-TSS (FBgn0031047) protein_coding-promoter-TSS (FBgn0031047) 363 FBgn0087008 FBgn0087008 FBtr0074762 e(y)3 protein_coding FLAG-S2-jox2017_R1_peak_85 chr2R 11022994 11023140 + 67 NA intron (FBgn0015371, intron 1 of 5) protein_coding-intron (FBgn0015371, intron 1 of 4) 9957 FBgn0262954 FBgn0262954 FBtr0112379 Rpb12 protein_coding FLAG-S2-jox2017_R1_peak_236 chr3R 18320643 18320782 + 67 NA Intergenic Intergenic 1981 FBgn0038979 FBgn0038979 FBtr0084259 CG7046 protein_coding FLAG-S2-jox2017_R1_peak_303 chrUextra 10087022 10087265 + 67 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_135 chr3L 9328858 9328997 + 67 NA promoter-TSS (FBgn0035975) protein_coding-promoter-TSS (FBgn0035975) 138 FBgn0035975 FBgn0035975 FBtr0076433 PGRP-LA protein_coding FLAG-S2-jox2017_R1_peak_401 chrUextra 28422834 28423166 + 66 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_380 chrUextra 27923563 27923801 + 66 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_508 chrX 14424722 14424861 + 66 NA Intergenic Intergenic 34621 FBgn0030570 FBgn0030570 FBtr0073929 CG12540 protein_coding FLAG-S2-jox2017_R1_peak_458 chrUextra 28887066 28887299 + 66 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_497 chrX 7195116 7195260 + 66 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -6786 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding FLAG-S2-jox2017_R1_peak_153 chr3L 14104628 14104789 + 66 NA TTS (FBgn0042630) protein_coding-TTS (FBgn0042630) -3490 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding FLAG-S2-jox2017_R1_peak_112 chr3L 691376 691515 + 65 NA TTS (FBgn0260862) protein_coding-TTS (FBgn0260862) 928 FBgn0035155 FBgn0035155 FBtr0330078 RabX6 protein_coding FLAG-S2-jox2017_R1_peak_138 chr3L 9671358 9671551 + 64 NA promoter-TSS (FBgn0036028) protein_coding-promoter-TSS (FBgn0036028) 749 FBgn0016081 FBgn0016081 FBtr0333858 fry protein_coding FLAG-S2-jox2017_R1_peak_392 chrUextra 28213732 28213975 + 64 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_375 chrUextra 27370450 27370681 + 64 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_477 chrUextra 28982888 28983164 + 64 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_239 chr3R 19001118 19001325 + 63 NA intron (FBgn0039061, intron 1 of 3) protein_coding-intron (FBgn0039061, intron 1 of 3) 1626 FBgn0039061 FBgn0039061 FBtr0301382 Ir protein_coding FLAG-S2-jox2017_R1_peak_334 chrUextra 19094525 19094805 + 62 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_160 chr3L 16683255 16683406 + 62 NA intron (FBgn0264605, intron 2 of 5) protein_coding-intron (FBgn0063485, intron 2 of 6) -14743 FBgn0036654 FBgn0036654 FBtr0075317 CG9692 protein_coding FLAG-S2-jox2017_R1_peak_388 chrUextra 28061247 28061393 + 60 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_362 chrUextra 26138380 26138615 + 60 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_361 chrUextra 25862140 25862593 + 59 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_466 chrUextra 28931943 28932194 + 59 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_300 chrUextra 9319839 9319993 + 59 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_265 chrU 4022787 4022980 + 59 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_7 chr2L 4507516 4507661 + 59 NA exon (FBgn0053196, exon 52 of 82) protein_coding-exon (FBgn0053196, exon 52 of 82) -30564 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding FLAG-S2-jox2017_R1_peak_462 chrUextra 28918603 28918743 + 59 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_342 chrUextra 22179043 22179191 + 59 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_387 chrUextra 28061027 28061177 + 59 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_470 chrUextra 28940552 28940691 + 58 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_157 chr3L 16312128 16312267 + 58 NA promoter-TSS (FBgn0036606) protein_coding-promoter-TSS (FBgn0036606) 429 FBgn0036605 FBgn0036605 FBtr0075432 CG13041 protein_coding FLAG-S2-jox2017_R1_peak_165 chr3L 19133548 19133712 + 58 NA TTS (FBgn0016797) protein_coding-TTS (FBgn0016797) -1555 FBgn0036851 FBgn0036851 FBtr0330092 CG14082 protein_coding FLAG-S2-jox2017_R1_peak_251 chr3R 24223124 24223264 + 57 NA Intergenic Intergenic -20736 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding FLAG-S2-jox2017_R1_peak_491 chrX 5048726 5048949 + 57 NA intron (FBgn0086911, intron 2 of 28) protein_coding-intron (FBgn0086911, intron 2 of 29) -10527 FBgn0029746 FBgn0029746 FBtr0070742 CG15465 protein_coding FLAG-S2-jox2017_R1_peak_351 chrUextra 23971047 23971305 + 57 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_455 chrUextra 28879597 28879736 + 56 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_474 chrUextra 28972877 28973105 + 56 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_484 chrX 3638589 3638744 + 56 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -25001 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding FLAG-S2-jox2017_R1_peak_456 chrUextra 28879808 28879948 + 56 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_426 chrUextra 28641313 28641452 + 56 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_386 chrUextra 28031577 28031721 + 56 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_410 chrUextra 28556144 28556371 + 56 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_258 chr3RHet 184084 184238 + 56 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_230 chr3R 16957117 16957282 + 55 NA exon (FBgn0038860, exon 2 of 2) protein_coding-exon (FBgn0038860, exon 2 of 2) 1258 FBgn0038860 FBgn0038860 FBtr0084015 Ice2 protein_coding FLAG-S2-jox2017_R1_peak_117 chr3L 2531420 2531622 + 55 NA intron (FBgn0010905, intron 3 of 16) protein_coding-intron (FBgn0010905, intron 3 of 15) -4548 FBgn0260480 FBgn0260480 FBtr0072962 CG32295 protein_coding FLAG-S2-jox2017_R1_peak_513 chrX 18095638 18095777 + 55 NA exon (FBgn0083228, exon 8 of 8) protein_coding-exon (FBgn0083228, exon 8 of 8) 3470 FBgn0030899 FBgn0030899 FBtr0074590 Her protein_coding FLAG-S2-jox2017_R1_peak_150 chr3L 12514720 12514969 + 55 NA TTS (FBgn0041775) protein_coding-TTS (FBgn0041775) 2270 FBgn0020388 FBgn0020388 FBtr0075969 Pcaf protein_coding FLAG-S2-jox2017_R1_peak_257 chr3R 27215171 27215335 + 55 NA exon (FBgn0039844, exon 6 of 10) protein_coding-exon (FBgn0039844, exon 6 of 10) 3996 FBgn0051204 FBgn0051204 FBtr0085814 CG31204 protein_coding FLAG-S2-jox2017_R1_peak_371 chrUextra 27214174 27214317 + 55 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_248 chr3R 22157138 22157277 + 54 NA exon (FBgn0053970, exon 2 of 9) protein_coding-exon (FBgn0053970, exon 2 of 9) -6210 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding FLAG-S2-jox2017_R1_peak_449 chrUextra 28830789 28831060 + 54 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_9 chr2L 4804050 4804189 + 54 NA Intergenic Intergenic -2196 FBgn0031629 FBgn0031629 FBtr0332595 Clect27 protein_coding FLAG-S2-jox2017_R1_peak_427 chrUextra 28654993 28655217 + 54 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_46 chr2L 20348966 20349105 + 54 NA TTS (FBgn0003475) protein_coding-TTS (FBgn0003475) 975 FBgn0011638 FBgn0011638 FBtr0081374 La protein_coding FLAG-S2-jox2017_R1_peak_418 chrUextra 28594768 28595002 + 54 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_247 chr3R 22099392 22099531 + 53 NA intron (FBgn0039420, intron 7 of 7) protein_coding-intron (FBgn0039420, intron 7 of 7) 11077 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding FLAG-S2-jox2017_R1_peak_448 chrUextra 28829092 28829368 + 53 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_383 chrUextra 27958696 27958929 + 53 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_127 chr3L 4550877 4551066 + 53 NA intron (FBgn0035558, intron 1 of 2) protein_coding-intron (FBgn0035558, intron 2 of 3) 4265 FBgn0053777 FBgn0053777 FBtr0091778 CG33777 protein_coding FLAG-S2-jox2017_R1_peak_396 chrUextra 28281774 28281917 + 52 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_467 chrUextra 28933519 28933658 + 52 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_90 chr2R 13639617 13639812 + 52 NA exon (FBgn0034275, exon 6 of 9) protein_coding-exon (FBgn0034275, exon 6 of 9) 1911 FBgn0034275 FBgn0034275 FBtr0089546 CG5002 protein_coding FLAG-S2-jox2017_R1_peak_229 chr3R 15474485 15474643 + 52 NA promoter-TSS (FBgn0038723) protein_coding-promoter-TSS (FBgn0038723) -340 FBgn0038723 FBgn0038723 FBtr0083803 CG6195 protein_coding FLAG-S2-jox2017_R1_peak_108 chr2R 20642322 20642472 + 51 NA exon (FBgn0050421, exon 5 of 7) protein_coding-exon (FBgn0050421, exon 5 of 7) -2506 FBgn0035056 FBgn0035056 FBtr0072370 spz6 protein_coding FLAG-S2-jox2017_R1_peak_28 chr2L 13285329 13285468 + 51 NA exon (FBgn0028406, exon 3 of 3) protein_coding-exon (FBgn0028406, exon 3 of 3) 1011 FBgn0028406 FBgn0028406 FBtr0080478 Drep-4 protein_coding FLAG-S2-jox2017_R1_peak_483 chrX 3637343 3637544 + 51 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -23778 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding FLAG-S2-jox2017_R1_peak_60 chr2R 4884489 4884628 + 51 NA exon (FBgn0085379, exon 4 of 9) protein_coding-exon (FBgn0085379, exon 4 of 9) 9534 FBgn0085379 FBgn0085379 FBtr0112560 CG34350 protein_coding FLAG-S2-jox2017_R1_peak_221 chr3R 14042677 14042816 + 50 NA exon (FBgn0038581, exon 4 of 5) protein_coding-exon (FBgn0038581, exon 4 of 5) 890 FBgn0038581 FBgn0038581 FBtr0083560 CG14314 protein_coding FLAG-S2-jox2017_R1_peak_125 chr3L 3418423 3418577 + 50 NA promoter-TSS (FBgn0014388) protein_coding-promoter-TSS (FBgn0014388) -573 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding FLAG-S2-jox2017_R1_peak_378 chrUextra 27809222 27809456 + 50 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_17 chr2L 6249478 6249617 + 50 NA Intergenic Intergenic -3576 FBgn0053531 FBgn0053531 FBtr0301305 Ddr protein_coding FLAG-S2-jox2017_R1_peak_40 chr2L 18183111 18183256 + 49 NA exon (FBgn0032673, exon 2 of 2) protein_coding-exon (FBgn0032673, exon 2 of 2) 1447 FBgn0032673 FBgn0032673 FBtr0081061 CG7180 protein_coding FLAG-S2-jox2017_R1_peak_148 chr3L 12203628 12203769 + 49 NA exon (FBgn0260941, exon 11 of 11) protein_coding-exon (FBgn0260941, exon 11 of 11) 3852 FBgn0260941 FBgn0260941 FBtr0301053 app protein_coding FLAG-S2-jox2017_R1_peak_83 chr2R 9722532 9722671 + 49 NA promoter-TSS (FBgn0033873) protein_coding-promoter-TSS (FBgn0033873) -8 FBgn0033873 FBgn0033873 FBtr0087646 CG6337 protein_coding FLAG-S2-jox2017_R1_peak_167 chr3L 20264717 20264856 + 49 NA exon (FBgn0052227, exon 6 of 10) protein_coding-exon (FBgn0052227, exon 6 of 10) 3649 FBgn0036962 FBgn0036962 FBtr0074849 CG17122 protein_coding FLAG-S2-jox2017_R1_peak_379 chrUextra 27826131 27826273 + 49 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_475 chrUextra 28977281 28977420 + 48 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_506 chrX 12782506 12782669 + 48 NA intron (FBgn0259171, intron 1 of 9) protein_coding-intron (FBgn0259171, intron 1 of 9) 8277 FBgn0259171 FBgn0259171 FBtr0333524 Pde9 protein_coding FLAG-S2-jox2017_R1_peak_14 chr2L 5356974 5357113 + 48 NA exon (FBgn0016920, exon 8 of 13) protein_coding-exon (FBgn0016920, exon 8 of 13) -14694 FBgn0031703 FBgn0031703 FBtr0079077 CG12512 protein_coding FLAG-S2-jox2017_R1_peak_270 chrUextra 27060 27306 + 48 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_93 chr2R 14095394 14095541 + 48 NA exon (FBgn0050114, exon 1 of 1) protein_coding-exon (FBgn0050114, exon 1 of 1) 207 FBgn0050114 FBgn0050114 FBtr0086753 CG30114 protein_coding FLAG-S2-jox2017_R1_peak_65 chr2R 5929102 5929255 + 48 NA exon (FBgn0085249, exon 2 of 2) protein_coding-exon (FBgn0085249, exon 2 of 2) 1817 FBgn0085249 FBgn0085249 FBtr0112413 CG34220 protein_coding FLAG-S2-jox2017_R1_peak_516 chrX 19329305 19329464 + 48 NA intron (FBgn0031016, intron 3 of 4) protein_coding-intron (FBgn0031016, intron 3 of 5) -39776 FBgn0031018 FBgn0031018 FBtr0074710 CG12200 protein_coding FLAG-S2-jox2017_R1_peak_115 chr3L 1719340 1719570 + 48 NA exon (FBgn0027594, exon 6 of 11) protein_coding-exon (FBgn0027594, exon 6 of 11) 3698 FBgn0035262 FBgn0035262 FBtr0072800 CG18171 protein_coding FLAG-S2-jox2017_R1_peak_486 chrX 4240941 4241115 + 48 NA promoter-TSS (FBgn0262738) protein_coding-promoter-TSS (FBgn0262738) -17692 FBgn0029705 FBgn0029705 FBtr0070654 CG12693 protein_coding FLAG-S2-jox2017_R1_peak_186 chr3R 992877 993016 + 48 NA exon (FBgn0037295, exon 5 of 6) protein_coding-exon (FBgn0037295, exon 5 of 6) 1917 FBgn0037295 FBgn0037295 FBtr0110950 dpr16 protein_coding FLAG-S2-jox2017_R1_peak_364 chrUextra 26185772 26186081 + 48 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_430 chrUextra 28676988 28677206 + 47 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_47 chr2L 21645653 21645792 + 47 NA intron (FBgn0023416, intron 18 of 18) protein_coding-intron (FBgn0023416, intron 18 of 18) -11834 FBgn0262620 FBgn0262620 FBtr0305481 CG43144 protein_coding FLAG-S2-jox2017_R1_peak_500 chrX 8502338 8502477 + 47 NA Intergenic Intergenic -2072 FBgn0030054 FBgn0030054 FBtr0071228 Caf1-180 protein_coding FLAG-S2-jox2017_R1_peak_194 chr3R 3172703 3172855 + 47 NA TTS (FBgn0051496) protein_coding-TTS (FBgn0051496) 224 FBgn0051501 FBgn0051501 FBtr0081583 nxf4 protein_coding FLAG-S2-jox2017_R1_peak_509 chrX 15405569 15405709 + 47 NA TTS (FBgn0027287) protein_coding-TTS (FBgn0027287) 2127 FBgn0262395 FBgn0262395 FBtr0304289 mir-12 pre_miRNA FLAG-S2-jox2017_R1_peak_369 chrUextra 26731169 26731310 + 47 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_420 chrUextra 28616559 28616783 + 47 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_184 chr3R 814117 814256 + 47 NA intron (FBgn0037292, intron 2 of 3) protein_coding-intron (FBgn0037292, intron 2 of 3) -2344 FBgn0263343 FBgn0263343 FBtr0308777 CR43424 ncRNA FLAG-S2-jox2017_R1_peak_397 chrUextra 28309343 28309485 + 46 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_89 chr2R 11716017 11716156 + 46 NA intron (FBgn0003130, intron 4 of 4) protein_coding-intron (FBgn0003130, intron 4 of 4) 6474 FBgn0003130 FBgn0003130 FBtr0087311 Poxn protein_coding FLAG-S2-jox2017_R1_peak_103 chr2R 18589193 18589353 + 46 NA promoter-TSS (FBgn0034766) protein_coding-promoter-TSS (FBgn0034766) -949 FBgn0034766 FBgn0034766 FBtr0071870 Obp59a protein_coding FLAG-S2-jox2017_R1_peak_147 chr3L 12054781 12054923 + 46 NA exon (FBgn0041096, exon 2 of 8) protein_coding-exon (FBgn0041096, exon 2 of 8) 3107 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding FLAG-S2-jox2017_R1_peak_155 chr3L 15033586 15033725 + 46 NA intron (FBgn0261090, intron 2 of 7) protein_coding-intron (FBgn0261090, intron 2 of 7) 2015 FBgn0036465 FBgn0036465 FBtr0075669 Rpn12R protein_coding FLAG-S2-jox2017_R1_peak_74 chr2R 7733752 7733891 + 46 NA intron (FBgn0033657, intron 1 of 5) protein_coding-intron (FBgn0033657, intron 1 of 5) 990 FBgn0033657 FBgn0033657 FBtr0088032 Sln protein_coding FLAG-S2-jox2017_R1_peak_197 chr3R 5292244 5292458 + 45 NA exon (FBgn0037698, exon 12 of 12) protein_coding-exon (FBgn0037698, exon 12 of 12) -7453 FBgn0037697 FBgn0037697 FBtr0082042 CG9363 protein_coding FLAG-S2-jox2017_R1_peak_145 chr3L 11505801 11505943 + 45 NA promoter-TSS (FBgn0036168) protein_coding-promoter-TSS (FBgn0036168) 551 FBgn0003373 FBgn0003373 FBtr0076096 Sgs3 protein_coding FLAG-S2-jox2017_R1_peak_310 chrUextra 11675848 11676054 + 45 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_252 chr3R 24329771 24329934 + 45 NA intron (FBgn0013813, intron 25 of 45) protein_coding-intron (FBgn0013813, intron 26 of 46) 16385 FBgn0051051 FBgn0051051 FBtr0085296 CG31051 protein_coding FLAG-S2-jox2017_R1_peak_340 chrUextra 21375671 21375904 + 45 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_298 chrUextra 9178666 9178805 + 44 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_104 chr2R 18733893 18734032 + 44 NA exon (FBgn0034785, exon 2 of 4) protein_coding-exon (FBgn0034785, exon 2 of 4) 438 FBgn0034785 FBgn0034785 FBtr0303785 CG3649 protein_coding FLAG-S2-jox2017_R1_peak_241 chr3R 20131077 20131244 + 44 NA exon (FBgn0259685, exon 2 of 13) protein_coding-exon (FBgn0259685, exon 2 of 13) 10360 FBgn0259685 FBgn0259685 FBtr0304726 crb protein_coding FLAG-S2-jox2017_R1_peak_282 chrUextra 5350266 5350487 + 44 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_299 chrUextra 9215549 9215797 + 44 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_256 chr3R 26591361 26591503 + 44 NA promoter-TSS (FBgn0004606) protein_coding-promoter-TSS (FBgn0004606) -216 FBgn0004606 FBgn0004606 FBtr0085702 zfh1 protein_coding FLAG-S2-jox2017_R1_peak_416 chrUextra 28583080 28583239 + 44 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_154 chr3L 14771762 14771910 + 44 NA exon (FBgn0036449, exon 2 of 8) protein_coding-exon (FBgn0036449, exon 2 of 8) -2607 FBgn0036448 FBgn0036448 FBtr0075700 mop protein_coding FLAG-S2-jox2017_R1_peak_224 chr3R 14204088 14204309 + 44 NA exon (FBgn0038610, exon 3 of 3) protein_coding-exon (FBgn0038610, exon 3 of 3) 2699 FBgn0038610 FBgn0038610 FBtr0083583 CG7675 protein_coding FLAG-S2-jox2017_R1_peak_18 chr2L 6345364 6345558 + 44 NA TTS (FBgn0031800) protein_coding-TTS (FBgn0031800) 2966 FBgn0031800 FBgn0031800 FBtr0079283 CG9497 protein_coding FLAG-S2-jox2017_R1_peak_8 chr2L 4557613 4557805 + 44 NA exon (FBgn0053196, exon 8 of 47) protein_coding-exon (FBgn0053196, exon 8 of 47) 20492 FBgn0031613 FBgn0031613 FBtr0077444 HP6 protein_coding FLAG-S2-jox2017_R1_peak_181 chr3R 367860 368053 + 43 NA exon (FBgn0037260, exon 2 of 2) protein_coding-exon (FBgn0037260, exon 2 of 2) 878 FBgn0037260 FBgn0037260 FBtr0303866 Mur82C protein_coding FLAG-S2-jox2017_R1_peak_87 chr2R 11244585 11244776 + 43 NA exon (FBgn0034013, exon 2 of 10) protein_coding-exon (FBgn0034013, exon 2 of 10) 7021 FBgn0034013 FBgn0034013 FBtr0087382 unc-5 protein_coding FLAG-S2-jox2017_R1_peak_311 chrUextra 11781159 11781399 + 43 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_469 chrUextra 28939105 28939351 + 43 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_139 chr3L 9776249 9776404 + 43 NA exon (FBgn0036043, exon 10 of 13) protein_coding-exon (FBgn0036043, exon 10 of 13) 14461 FBgn0036044 FBgn0036044 FBtr0310626 CG14168 protein_coding FLAG-S2-jox2017_R1_peak_363 chrUextra 26160239 26160380 + 42 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_514 chrX 19053171 19053310 + 42 NA intron (FBgn0261461, intron 2 of 5) protein_coding-intron (FBgn0261461, intron 1 of 4) 10015 FBgn0263571 FBgn0263571 FBtr0309726 mir-4959 pre_miRNA FLAG-S2-jox2017_R1_peak_424 chrUextra 28632200 28632440 + 42 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_48 chr2L 21828401 21828540 + 41 NA promoter-TSS (FBgn0003866) protein_coding-promoter-TSS (FBgn0003866) -123 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding FLAG-S2-jox2017_R1_peak_176 chr3R 120944 121083 + 41 NA promoter-TSS (FBgn0037230) protein_coding-promoter-TSS (FBgn0037230) -129 FBgn0262214 FBgn0262214 FBtr0304265 mir-929 pre_miRNA FLAG-S2-jox2017_R1_peak_32 chr2L 13950527 13950705 + 40 NA intron (FBgn0032536, intron 7 of 8) protein_coding-intron (FBgn0032536, intron 7 of 8) -3144 FBgn0028544 FBgn0028544 FBtr0080557 CG16884 protein_coding FLAG-S2-jox2017_R1_peak_198 chr3R 5610149 5610391 + 40 NA promoter-TSS (FBgn0037754) protein_coding-promoter-TSS (FBgn0037754) -138 FBgn0037754 FBgn0037754 FBtr0082139 CG8500 protein_coding FLAG-S2-jox2017_R1_peak_463 chrUextra 28922254 28922393 + 40 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_170 chr3L 20372576 20372751 + 40 NA exon (FBgn0036980, exon 5 of 13) protein_coding-exon (FBgn0036980, exon 5 of 13) 1821 FBgn0036980 FBgn0036980 FBtr0330158 RhoBTB protein_coding FLAG-S2-jox2017_R1_peak_402 chrUextra 28424599 28424744 + 40 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_136 chr3L 9337330 9337478 + 40 NA promoter-TSS (FBgn0035976) protein_coding-promoter-TSS (FBgn0035976) 3850 FBgn0035976 FBgn0035976 FBtr0300291 PGRP-LC protein_coding FLAG-S2-jox2017_R1_peak_348 chrUextra 23503062 23503201 + 40 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_121 chr3L 2990808 2990968 + 40 NA Intergenic Intergenic -4284 FBgn0035384 FBgn0035384 FBtr0332084 CG2113 protein_coding FLAG-S2-jox2017_R1_peak_219 chr3R 13129537 13129676 + 40 NA Intergenic Intergenic 16096 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA FLAG-S2-jox2017_R1_peak_202 chr3R 6468710 6468849 + 40 NA Intergenic Intergenic -13389 FBgn0085333 FBgn0085333 FBtr0112500 CG34304 protein_coding FLAG-S2-jox2017_R1_peak_254 chr3R 25062846 25063014 + 40 NA exon (FBgn0039656, exon 4 of 7) protein_coding-exon (FBgn0039656, exon 4 of 7) 1496 FBgn0039656 FBgn0039656 FBtr0085403 CG11951 protein_coding FLAG-S2-jox2017_R1_peak_521 chrXHet 169396 169539 + 40 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_187 chr3R 1016866 1017027 + 39 NA intron (FBgn0259212, intron 6 of 19) protein_coding-intron (FBgn0259212, intron 6 of 16) 3939 FBgn0263018 FBgn0263018 FBtr0306791 snRNA:U4atac:82E snRNA FLAG-S2-jox2017_R1_peak_296 chrUextra 8920174 8920314 + 39 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_446 chrUextra 28820080 28820395 + 39 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_337 chrUextra 19475289 19475428 + 39 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_356 chrUextra 24910069 24910209 + 39 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_308 chrUextra 11405010 11405150 + 39 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_429 chrUextra 28673027 28673168 + 39 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_461 chrUextra 28905393 28905625 + 39 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_122 chr3L 3043686 3043892 + 38 NA TTS (FBgn0035390) protein_coding-TTS (FBgn0035390) 1068 FBgn0040308 FBgn0040308 FBtr0332112 Jafrac2 protein_coding FLAG-S2-jox2017_R1_peak_132 chr3L 8343799 8343941 + 38 NA exon (FBgn0035879, exon 6 of 7) protein_coding-exon (FBgn0035879, exon 6 of 7) 3436 FBgn0263553 FBgn0263553 FBtr0309680 mir-4913 pre_miRNA FLAG-S2-jox2017_R1_peak_238 chr3R 18925489 18925693 + 38 NA TTS (FBgn0039052) protein_coding-TTS (FBgn0039052) 333 FBgn0039053 FBgn0039053 FBtr0084353 CG6738 protein_coding FLAG-S2-jox2017_R1_peak_66 chr2R 5929885 5930033 + 38 NA exon (FBgn0085249, exon 2 of 2) protein_coding-exon (FBgn0085249, exon 2 of 2) 1036 FBgn0085249 FBgn0085249 FBtr0112413 CG34220 protein_coding FLAG-S2-jox2017_R1_peak_39 chr2L 18090952 18091091 + 38 NA TTS (FBgn0032663) protein_coding-TTS (FBgn0032663) 1217 FBgn0032663 FBgn0032663 FBtr0081045 CG15153 protein_coding FLAG-S2-jox2017_R1_peak_442 chrUextra 28795692 28795896 + 38 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_290 chrUextra 8132062 8132287 + 38 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_182 chr3R 596784 596923 + 38 NA intron (FBgn0051530, intron 1 of 4) protein_coding-intron (FBgn0051530, intron 1 of 4) 1954 FBgn0051530 FBgn0051530 FBtr0078882 CG31530 protein_coding FLAG-S2-jox2017_R1_peak_33 chr2L 13980951 13981090 + 38 NA exon (FBgn0028939, exon 2 of 3) protein_coding-exon (FBgn0028939, exon 2 of 3) 874 FBgn0028939 FBgn0028939 FBtr0080589 nimC2 protein_coding FLAG-S2-jox2017_R1_peak_433 chrUextra 28725834 28726069 + 38 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_226 chr3R 15262894 15263128 + 38 NA intron (FBgn0051221, intron 2 of 4) protein_coding-intron (FBgn0051221, intron 2 of 4) -12090 FBgn0038706 FBgn0038706 FBtr0083770 CG3517 protein_coding FLAG-S2-jox2017_R1_peak_459 chrUextra 28896870 28897009 + 38 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_231 chr3R 16993940 16994099 + 38 NA promoter-TSS (FBgn0260004) protein_coding-promoter-TSS (FBgn0260004) -92 FBgn0260004 FBgn0260004 FBtr0084027 Snmp1 protein_coding FLAG-S2-jox2017_R1_peak_24 chr2L 10212570 10212739 + 38 NA exon (FBgn0032194, exon 4 of 5) protein_coding-exon (FBgn0032194, exon 4 of 5) 1471 FBgn0032194 FBgn0032194 FBtr0079947 CG4901 protein_coding FLAG-S2-jox2017_R1_peak_11 chr2L 4966959 4967098 + 37 NA TTS (FBgn0262467) protein_coding-TTS (FBgn0262467) 747 FBgn0015834 FBgn0015834 FBtr0079053 Trip1 protein_coding FLAG-S2-jox2017_R1_peak_253 chr3R 24559250 24559433 + 37 NA exon (FBgn0027655, exon 29 of 29) protein_coding-exon (FBgn0027655, exon 29 of 29) 11144 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding FLAG-S2-jox2017_R1_peak_96 chr2R 15573218 15573357 + 37 NA exon (FBgn0034467, exon 7 of 7) protein_coding-exon (FBgn0034467, exon 7 of 7) 2296 FBgn0034467 FBgn0034467 FBtr0086481 CG15128 protein_coding FLAG-S2-jox2017_R1_peak_403 chrUextra 28425830 28426050 + 37 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_107 chr2R 19967668 19967836 + 37 NA promoter-TSS (FBgn0034973) protein_coding-promoter-TSS (FBgn0034973) 247 FBgn0034972 FBgn0034972 FBtr0072288 CG10339 protein_coding FLAG-S2-jox2017_R1_peak_53 chr2R 2950160 2950299 + 37 NA promoter-TSS (FBgn0027558) protein_coding-promoter-TSS (FBgn0027558) 842 FBgn0033138 FBgn0033138 FBtr0089060 Tsp42Eq protein_coding FLAG-S2-jox2017_R1_peak_283 chrUextra 5828713 5828981 + 37 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_227 chr3R 15334785 15334924 + 37 NA promoter-TSS (FBgn0260003) protein_coding-promoter-TSS (FBgn0260003) -18017 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding FLAG-S2-jox2017_R1_peak_113 chr3L 934095 934242 + 36 NA intron (FBgn0264574, intron 2 of 14) protein_coding-intron (FBgn0264574, intron 2 of 12) 25056 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding FLAG-S2-jox2017_R1_peak_389 chrUextra 28073647 28073786 + 36 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_172 chr3L 20919366 20919505 + 36 NA exon (FBgn0011591, exon 7 of 7) protein_coding-exon (FBgn0011591, exon 7 of 7) -1491 FBgn0037035 FBgn0037035 FBtr0078266 CG10589 protein_coding FLAG-S2-jox2017_R1_peak_325 chrUextra 16605479 16605708 + 36 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_114 chr3L 1299367 1299506 + 35 NA TTS (FBgn0262937) protein_coding-TTS (FBgn0262937) 764 FBgn0025682 FBgn0025682 FBtr0089941 scf protein_coding FLAG-S2-jox2017_R1_peak_244 chr3R 21313069 21313217 + 35 NA exon (FBgn0040212, exon 3 of 4) protein_coding-exon (FBgn0040212, exon 3 of 4) 3515 FBgn0040212 FBgn0040212 FBtr0330374 Dhap-at protein_coding FLAG-S2-jox2017_R1_peak_38 chr2L 17991058 17991247 + 35 NA exon (FBgn0051742, exon 1 of 1) protein_coding-exon (FBgn0051742, exon 1 of 1) 734 FBgn0051742 FBgn0051742 FBtr0081025 CG31742 protein_coding FLAG-S2-jox2017_R1_peak_216 chr3R 12744834 12745034 + 35 NA intron (FBgn0263610, intron 1 of 7) ncRNA-intron (FBgn0263610, intron 1 of 7) 4021 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA FLAG-S2-jox2017_R1_peak_2 chr2L 626789 627356 + 34 NA exon (FBgn0031273, exon 1 of 1) protein_coding-exon (FBgn0031273, exon 1 of 1) 1409 FBgn0031273 FBgn0031273 FBtr0077999 CG2839 protein_coding FLAG-S2-jox2017_R1_peak_404 chrUextra 28477548 28477689 + 34 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_84 chr2R 10366221 10366360 + 34 NA Intergenic Intergenic -2426 FBgn0001332 FBgn0001332 FBtr0087492 L protein_coding FLAG-S2-jox2017_R1_peak_61 chr2R 4974806 4974966 + 34 NA promoter-TSS (FBgn0010220) protein_coding-promoter-TSS (FBgn0010220) 412 FBgn0033372 FBgn0033372 FBtr0310148 CG13742 protein_coding FLAG-S2-jox2017_R1_peak_116 chr3L 2114084 2114223 + 34 NA exon (FBgn0086906, exon 2 of 14) protein_coding-exon (FBgn0086906, exon 2 of 14) 1458 FBgn0086906 FBgn0086906 FBtr0072848 sls protein_coding FLAG-S2-jox2017_R1_peak_106 chr2R 19813390 19813529 + 34 NA TTS (FBgn0261794) protein_coding-TTS (FBgn0261794) 697 FBgn0034931 FBgn0034931 FBtr0072140 CG2812 protein_coding FLAG-S2-jox2017_R1_peak_105 chr2R 19799327 19799490 + 34 NA intron (FBgn0261794, intron 3 of 20) protein_coding-intron (FBgn0261794, intron 3 of 19) 1359 FBgn0261794 FBgn0261794 FBtr0072139 kcc protein_coding FLAG-S2-jox2017_R1_peak_407 chrUextra 28531105 28531244 + 34 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_520 chrX 20704564 20704703 + 34 NA intron (FBgn0085387, intron 3 of 11) protein_coding-intron (FBgn0085387, intron 2 of 10) 11460 FBgn0031132 FBgn0031132 FBtr0077280 CG15450 protein_coding FLAG-S2-jox2017_R1_peak_15 chr2L 5403617 5403756 + 34 NA promoter-TSS (FBgn0016660) protein_coding-promoter-TSS (FBgn0016660) -656 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding FLAG-S2-jox2017_R1_peak_495 chrX 6737297 6737480 + 34 NA promoter-TSS (FBgn0029912) protein_coding-promoter-TSS (FBgn0029912) 565 FBgn0029911 FBgn0029911 FBtr0300880 CG14435 protein_coding FLAG-S2-jox2017_R1_peak_411 chrUextra 28561345 28561486 + 34 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_384 chrUextra 27983132 27983271 + 34 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_489 chrX 4465174 4465313 + 33 NA exon (FBgn0029717, exon 2 of 2) protein_coding-exon (FBgn0029717, exon 2 of 2) 719 FBgn0029717 FBgn0029717 FBtr0070697 CG12684 protein_coding FLAG-S2-jox2017_R1_peak_472 chrUextra 28957103 28957286 + 33 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_218 chr3R 12954472 12954632 + 33 NA TTS (FBgn0038481) protein_coding-TTS (FBgn0038481) 606 FBgn0051265 FBgn0051265 FBtr0083402 CG31265 protein_coding FLAG-S2-jox2017_R1_peak_191 chr3R 1999560 1999699 + 32 NA exon (FBgn0037406, exon 1 of 3) protein_coding-exon (FBgn0037406, exon 1 of 3) 262 FBgn0037406 FBgn0037406 FBtr0078588 Osi1 protein_coding FLAG-S2-jox2017_R1_peak_278 chrUextra 3212352 3212590 + 32 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_80 chr2R 8780369 8780515 + 32 NA exon (FBgn0003975, exon 4 of 8) protein_coding-exon (FBgn0003975, exon 4 of 8) 8736 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding FLAG-S2-jox2017_R1_peak_204 chr3R 7716736 7716875 + 32 NA exon (FBgn0051368, exon 6 of 8) protein_coding-exon (FBgn0051368, exon 6 of 8) 2214 FBgn0037962 FBgn0037962 FBtr0082514 CG6971 protein_coding FLAG-S2-jox2017_R1_peak_329 chrUextra 17929896 17930045 + 32 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_220 chr3R 13956276 13956421 + 32 NA exon (FBgn0003499, exon 5 of 5) protein_coding-exon (FBgn0003499, exon 5 of 5) -21494 FBgn0038567 FBgn0038567 FBtr0083546 CG14316 protein_coding FLAG-S2-jox2017_R1_peak_234 chr3R 17300221 17300412 + 32 NA Intergenic Intergenic -7731 FBgn0038889 FBgn0038889 FBtr0084109 CG7922 protein_coding FLAG-S2-jox2017_R1_peak_177 chr3R 189121 189263 + 32 NA exon (FBgn0037238, exon 2 of 6) protein_coding-exon (FBgn0037238, exon 2 of 6) 3587 FBgn0037238 FBgn0037238 FBtr0332450 CG1090 protein_coding FLAG-S2-jox2017_R1_peak_140 chr3L 10240460 10240599 + 32 NA Intergenic Intergenic -2723 FBgn0036078 FBgn0036078 FBtr0076300 Or67c protein_coding FLAG-S2-jox2017_R1_peak_199 chr3R 5844799 5845060 + 32 NA exon (FBgn0053208, exon 7 of 8) protein_coding-exon (FBgn0053208, exon 7 of 8) 4401 FBgn0051407 FBgn0051407 FBtr0082214 CG31407 protein_coding FLAG-S2-jox2017_R1_peak_51 chr2R 1351860 1351999 + 32 NA Intergenic Intergenic 31412 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding FLAG-S2-jox2017_R1_peak_423 chrUextra 28630885 28631029 + 31 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_36 chr2L 15728969 15729143 + 31 NA exon (FBgn0010382, exon 6 of 6) protein_coding-exon (FBgn0010382, exon 6 of 6) 17553 FBgn0010382 FBgn0010382 FBtr0080777 CycE protein_coding FLAG-S2-jox2017_R1_peak_367 chrUextra 26550183 26550435 + 31 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_88 chr2R 11447991 11448130 + 31 NA promoter-TSS (FBgn0034031) protein_coding-promoter-TSS (FBgn0034031) 3627 FBgn0034031 FBgn0034031 FBtr0306572 CG12963 protein_coding FLAG-S2-jox2017_R1_peak_232 chr3R 17195233 17195423 + 31 NA TTS (FBgn0002781) protein_coding-TTS (FBgn0002781) 144 FBgn0261845 FBgn0261845 FBtr0303410 pre-mod(mdg4)-U protein_coding FLAG-S2-jox2017_R1_peak_124 chr3L 3394351 3394490 + 31 NA Intergenic Intergenic 16152 FBgn0035445 FBgn0035445 FBtr0073077 CG12014 protein_coding FLAG-S2-jox2017_R1_peak_78 chr2R 8235552 8235691 + 31 NA exon (FBgn0033718, exon 1 of 2) protein_coding-exon (FBgn0033718, exon 1 of 2) 3030 FBgn0033718 FBgn0033718 FBtr0087904 ana3 protein_coding FLAG-S2-jox2017_R1_peak_409 chrUextra 28555517 28555740 + 31 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_381 chrUextra 27929334 27929508 + 31 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_134 chr3L 8597693 8597832 + 31 NA promoter-TSS (FBgn0035914) protein_coding-promoter-TSS (FBgn0035914) 5 FBgn0035914 FBgn0035914 FBtr0330165 CG6282 protein_coding FLAG-S2-jox2017_R1_peak_16 chr2L 6034982 6035121 + 31 NA promoter-TSS (FBgn0031765) protein_coding-promoter-TSS (FBgn0031765) -628 FBgn0031765 FBgn0031765 FBtr0100665 CG9109 protein_coding FLAG-S2-jox2017_R1_peak_425 chrUextra 28633363 28633595 + 31 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_175 chr3L 23301749 23301888 + 31 NA Intergenic Intergenic 29382 FBgn0010215 FBgn0010215 FBtr0070038 alpha-Cat protein_coding FLAG-S2-jox2017_R1_peak_263 chrU 2701215 2701367 + 30 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_450 chrUextra 28831336 28831635 + 30 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_129 chr3L 6661737 6661876 + 30 NA promoter-TSS (FBgn0041232) protein_coding-promoter-TSS (FBgn0041232) -890 FBgn0041232 FBgn0041232 FBtr0300026 Gr65a protein_coding FLAG-S2-jox2017_R1_peak_91 chr2R 13809347 13809493 + 30 NA exon (FBgn0011589, exon 16 of 17) protein_coding-exon (FBgn0011589, exon 16 of 17) 26837 FBgn0034284 FBgn0034284 FBtr0086803 CG14491 protein_coding FLAG-S2-jox2017_R1_peak_168 chr3L 20267218 20267375 + 29 NA exon (FBgn0036962, exon 1 of 1) protein_coding-exon (FBgn0036962, exon 1 of 1) 1139 FBgn0036962 FBgn0036962 FBtr0074849 CG17122 protein_coding FLAG-S2-jox2017_R1_peak_62 chr2R 5322869 5323008 + 29 NA TTS (FBgn0017558) protein_coding-TTS (FBgn0017558) 6128 FBgn0029092 FBgn0029092 FBtr0088550 ced-6 protein_coding FLAG-S2-jox2017_R1_peak_34 chr2L 14238945 14239084 + 29 NA Intergenic Intergenic -4892 FBgn0016930 FBgn0016930 FBtr0329933 smi35A protein_coding FLAG-S2-jox2017_R1_peak_205 chr3R 9003203 9003436 + 29 NA Intergenic Intergenic -3707 FBgn0038122 FBgn0038122 FBtr0082732 CG8138 protein_coding FLAG-S2-jox2017_R1_peak_169 chr3L 20271624 20271847 + 29 NA exon (FBgn0052227, exon 3 of 10) protein_coding-exon (FBgn0052227, exon 3 of 10) -3300 FBgn0036962 FBgn0036962 FBtr0074849 CG17122 protein_coding FLAG-S2-jox2017_R1_peak_406 chrUextra 28504435 28504576 + 29 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_212 chr3R 11371917 11372056 + 29 NA exon (FBgn0038349, exon 4 of 8) protein_coding-exon (FBgn0038349, exon 4 of 8) 1471 FBgn0038349 FBgn0038349 FBtr0083151 CG6045 protein_coding FLAG-S2-jox2017_R1_peak_13 chr2L 5201721 5201872 + 29 NA promoter-TSS (FBgn0083028) snoRNA-promoter-TSS (FBgn0083028) -587 FBgn0083028 FBgn0083028 FBtr0113538 snoRNA:Psi18S-525k snoRNA FLAG-S2-jox2017_R1_peak_131 chr3L 7119672 7119811 + 29 NA exon (FBgn0035741, exon 2 of 3) protein_coding-exon (FBgn0035741, exon 2 of 3) 736 FBgn0035741 FBgn0035741 FBtr0076912 BBS1 protein_coding FLAG-S2-jox2017_R1_peak_111 chr3L 292931 293074 + 29 NA exon (FBgn0264707, exon 1 of 7) protein_coding-exon (FBgn0264707, exon 1 of 7) 15565 FBgn0264707 FBgn0264707 FBtr0333957 RhoGEF3 protein_coding FLAG-S2-jox2017_R1_peak_345 chrUextra 22466003 22466142 + 29 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_211 chr3R 10248056 10248195 + 29 NA TTS (FBgn0085417) protein_coding-TTS (FBgn0085417) 3810 FBgn0085417 FBgn0085417 FBtr0301081 CG34388 protein_coding FLAG-S2-jox2017_R1_peak_76 chr2R 7923108 7923277 + 29 NA TTS (FBgn0262820) protein_coding-TTS (FBgn0262820) 1478 FBgn0262820 FBgn0262820 FBtr0306063 CG43191 protein_coding FLAG-S2-jox2017_R1_peak_77 chr2R 8063846 8063985 + 29 NA exon (FBgn0010621, exon 2 of 3) protein_coding-exon (FBgn0010621, exon 2 of 3) 1314 FBgn0010621 FBgn0010621 FBtr0087988 Cct5 protein_coding FLAG-S2-jox2017_R1_peak_178 chr3R 190980 191119 + 29 NA exon (FBgn0037238, exon 5 of 6) protein_coding-exon (FBgn0037238, exon 5 of 6) 5444 FBgn0037238 FBgn0037238 FBtr0332450 CG1090 protein_coding FLAG-S2-jox2017_R1_peak_146 chr3L 12002313 12002461 + 29 NA exon (FBgn0041096, exon 7 of 8) protein_coding-exon (FBgn0041096, exon 7 of 8) 6132 FBgn0036240 FBgn0036240 FBtr0332709 CG6928 protein_coding FLAG-S2-jox2017_R1_peak_468 chrUextra 28937457 28937691 + 29 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_41 chr2L 18247539 18247678 + 29 NA intron (FBgn0261804, intron 2 of 14) protein_coding-intron (FBgn0261804, intron 2 of 14) -3799 FBgn0263325 FBgn0263325 FBtr0308756 CG43406 protein_coding FLAG-S2-jox2017_R1_peak_213 chr3R 11552065 11552211 + 29 NA Intergenic Intergenic -5330 FBgn0085303 FBgn0085303 FBtr0112469 CG34274 protein_coding FLAG-S2-jox2017_R1_peak_58 chr2R 4459061 4459200 + 29 NA exon (FBgn0033304, exon 1 of 1) protein_coding-exon (FBgn0033304, exon 1 of 1) 1126 FBgn0033304 FBgn0033304 FBtr0088690 Cyp6a13 protein_coding FLAG-S2-jox2017_R1_peak_223 chr3R 14080349 14080488 + 28 NA promoter-TSS (FBgn0261019) protein_coding-promoter-TSS (FBgn0261019) 773 FBgn0263757 FBgn0263757 FBtr0310379 Rpb4 protein_coding FLAG-S2-jox2017_R1_peak_201 chr3R 6220453 6220629 + 28 NA intron (FBgn0259938, intron 1 of 2) protein_coding-intron (FBgn0259938, intron 1 of 3) -6213 FBgn0045443 FBgn0045443 FBtr0332553 mthl11 protein_coding FLAG-S2-jox2017_R1_peak_346 chrUextra 22840296 22840435 + 28 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_193 chr3R 2296460 2296599 + 28 NA exon (FBgn0037447, exon 1 of 1) protein_coding-exon (FBgn0037447, exon 1 of 1) 2395 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding FLAG-S2-jox2017_R1_peak_137 chr3L 9461016 9461159 + 28 NA intron (FBgn0052043, intron 1 of 3) protein_coding-intron (FBgn0052043, intron 2 of 4) 4669 FBgn0052043 FBgn0052043 FBtr0333854 CG32043 protein_coding FLAG-S2-jox2017_R1_peak_445 chrUextra 28817536 28817675 + 28 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_354 chrUextra 24380540 24380777 + 28 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_171 chr3L 20385273 20385438 + 27 NA promoter-TSS (FBgn0264572) ncRNA-promoter-TSS (FBgn0264572) -868 FBgn0264572 FBgn0264572 FBtr0333481 CR43944 ncRNA FLAG-S2-jox2017_R1_peak_31 chr2L 13504977 13505116 + 27 NA exon (FBgn0023407, exon 7 of 7) protein_coding-exon (FBgn0023407, exon 7 of 7) -22795 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding FLAG-S2-jox2017_R1_peak_101 chr2R 17058827 17059022 + 27 NA promoter-TSS (FBgn0261067) protein_coding-promoter-TSS (FBgn0261067) 407 FBgn0261850 FBgn0261850 FBtr0071577 Xpd protein_coding FLAG-S2-jox2017_R1_peak_179 chr3R 256705 256896 + 27 NA exon (FBgn0037249, exon 3 of 4) protein_coding-exon (FBgn0037249, exon 3 of 4) -1749 FBgn0037248 FBgn0037248 FBtr0301244 Spargel protein_coding FLAG-S2-jox2017_R1_peak_57 chr2R 4351587 4351757 + 27 NA exon (FBgn0050359, exon 4 of 6) protein_coding-exon (FBgn0050359, exon 4 of 6) -1003 FBgn0050360 FBgn0050360 FBtr0273322 Mal-A6 protein_coding FLAG-S2-jox2017_R1_peak_464 chrUextra 28923192 28923331 + 26 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_315 chrUextra 13275144 13275408 + 26 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_343 chrUextra 22440755 22440894 + 26 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_128 chr3L 6136156 6136295 + 25 NA promoter-TSS (FBgn0020641) protein_coding-promoter-TSS (FBgn0020641) -270 FBgn0020641 FBgn0020641 FBtr0076990 Lcp65Ad protein_coding FLAG-S2-jox2017_R1_peak_261 chr4 529048 529279 + 25 NA intron (FBgn0004607, intron 2 of 12) protein_coding-intron (FBgn0004607, intron 2 of 13) 6727 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding FLAG-S2-jox2017_R1_peak_493 chrX 5780973 5781117 + 25 NA Intergenic Intergenic 7154 FBgn0029820 FBgn0029820 FBtr0070821 CG16721 protein_coding FLAG-S2-jox2017_R1_peak_245 chr3R 21444976 21445115 + 25 NA exon (FBgn0039347, exon 1 of 1) protein_coding-exon (FBgn0039347, exon 1 of 1) 909 FBgn0039347 FBgn0039347 FBtr0304805 CG5071 protein_coding FLAG-S2-jox2017_R1_peak_195 chr3R 3952519 3952658 + 25 NA promoter-TSS (FBgn0037550) protein_coding-promoter-TSS (FBgn0037550) 252 FBgn0037551 FBgn0037551 FBtr0081794 Gie protein_coding FLAG-S2-jox2017_R1_peak_21 chr2L 7653842 7654008 + 25 NA intron (FBgn0264087, intron 5 of 12) protein_coding-intron (FBgn0264087, intron 5 of 12) 20758 FBgn0264087 FBgn0264087 FBtr0330703 Slob protein_coding FLAG-S2-jox2017_R1_peak_390 chrUextra 28090470 28090746 + 24 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_149 chr3L 12362177 12362324 + 24 NA exon (FBgn0036279, exon 16 of 17) protein_coding-exon (FBgn0036279, exon 16 of 17) -17606 FBgn0036278 FBgn0036278 FBtr0330069 GRHRII protein_coding FLAG-S2-jox2017_R1_peak_156 chr3L 15912390 15912529 + 24 NA intron (FBgn0036544, intron 1 of 15) protein_coding-intron (FBgn0036544, intron 1 of 15) 5502 FBgn0036544 FBgn0036544 FBtr0334071 sff protein_coding FLAG-S2-jox2017_R1_peak_399 chrUextra 28357896 28358109 + 24 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_196 chr3R 4139318 4139457 + 24 NA TTS (FBgn0037572) protein_coding-TTS (FBgn0037572) 451 FBgn0037573 FBgn0037573 FBtr0081834 eIF4AIII protein_coding FLAG-S2-jox2017_R1_peak_123 chr3L 3359917 3360056 + 24 NA exon (FBgn0004167, exon 11 of 14) protein_coding-exon (FBgn0004167, exon 11 of 14) -9570 FBgn0010381 FBgn0010381 FBtr0073073 Drs protein_coding FLAG-S2-jox2017_R1_peak_321 chrUextra 15559807 15559946 + 24 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_242 chr3R 20190001 20190282 + 24 NA TTS (FBgn0053340) protein_coding-TTS (FBgn0053340) 561 FBgn0039192 FBgn0039192 FBtr0084626 CG17784 protein_coding FLAG-S2-jox2017_R1_peak_50 chr2R 287486 287625 + 24 NA intron (FBgn0260798, intron 8 of 15) protein_coding-intron (FBgn0260798, intron 7 of 14) 71003 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding FLAG-S2-jox2017_R1_peak_209 chr3R 9954711 9954850 + 23 NA exon (FBgn0262955, exon 3 of 4) protein_coding-exon (FBgn0262955, exon 3 of 4) 3011 FBgn0038207 FBgn0038207 FBtr0082908 CG14356 protein_coding FLAG-S2-jox2017_R1_peak_249 chr3R 22863935 22864074 + 23 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -10938 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding FLAG-S2-jox2017_R1_peak_152 chr3L 13989124 13989300 + 23 NA exon (FBgn0250848, exon 3 of 3) protein_coding-exon (FBgn0250848, exon 3 of 3) -1079 FBgn0036395 FBgn0036395 FBtr0075767 CG17361 protein_coding FLAG-S2-jox2017_R1_peak_428 chrUextra 28658865 28659145 + 23 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_35 chr2L 15406972 15407111 + 23 NA Intergenic Intergenic 18544 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding FLAG-S2-jox2017_R1_peak_215 chr3R 12511458 12511644 + 23 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -30062 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding FLAG-S2-jox2017_R1_peak_163 chr3L 18383114 18383253 + 23 NA Intergenic Intergenic 8352 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding FLAG-S2-jox2017_R1_peak_246 chr3R 21502404 21502543 + 23 NA TTS (FBgn0039355) protein_coding-TTS (FBgn0039355) 1931 FBgn0039355 FBgn0039355 FBtr0331364 CG4730 protein_coding FLAG-S2-jox2017_R1_peak_26 chr2L 11456965 11457123 + 23 NA Intergenic Intergenic -11441 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding FLAG-S2-jox2017_R1_peak_434 chrUextra 28732400 28732544 + 23 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_19 chr2L 6419741 6419880 + 22 NA exon (FBgn0011722, exon 3 of 6) protein_coding-exon (FBgn0011722, exon 3 of 6) 3498 FBgn0011722 FBgn0011722 FBtr0079275 Tig protein_coding FLAG-S2-jox2017_R1_peak_488 chrX 4456162 4456301 + 22 NA intron (FBgn0052773, intron 2 of 4) protein_coding-intron (FBgn0052773, intron 2 of 4) 4126 FBgn0029716 FBgn0029716 FBtr0070679 CG3546 protein_coding FLAG-S2-jox2017_R1_peak_3 chr2L 2219400 2219539 + 22 NA exon (FBgn0031399, exon 5 of 7) protein_coding-exon (FBgn0031399, exon 5 of 7) 2179 FBgn0031399 FBgn0031399 FBtr0077835 mio protein_coding FLAG-S2-jox2017_R1_peak_180 chr3R 298011 298150 + 22 NA promoter-TSS (FBgn0051523) protein_coding-promoter-TSS (FBgn0051523) -3725 FBgn0051523 FBgn0051523 FBtr0078938 CG31523 protein_coding FLAG-S2-jox2017_R1_peak_95 chr2R 15058580 15058730 + 22 NA exon (FBgn0034420, exon 2 of 15) protein_coding-exon (FBgn0034420, exon 2 of 15) 1010 FBgn0034420 FBgn0034420 FBtr0290318 CG10737 protein_coding FLAG-S2-jox2017_R1_peak_56 chr2R 4346784 4346923 + 22 NA exon (FBgn0033294, exon 1 of 5) protein_coding-exon (FBgn0033294, exon 1 of 5) 524 FBgn0033294 FBgn0033294 FBtr0088748 Mal-A4 protein_coding FLAG-S2-jox2017_R1_peak_97 chr2R 16172042 16172181 + 22 NA exon (FBgn0034498, exon 5 of 6) protein_coding-exon (FBgn0034498, exon 5 of 6) 2473 FBgn0034498 FBgn0034498 FBtr0086302 CG16868 protein_coding FLAG-S2-jox2017_R1_peak_63 chr2R 5740413 5740552 + 21 NA exon (FBgn0027580, exon 5 of 7) protein_coding-exon (FBgn0027580, exon 5 of 7) 4916 FBgn0033454 FBgn0033454 FBtr0088373 CG1671 protein_coding FLAG-S2-jox2017_R1_peak_118 chr3L 2596268 2596407 + 21 NA TTS (FBgn0016794) protein_coding-TTS (FBgn0016794) 556 FBgn0062517 FBgn0062517 FBtr0072928 CG16984 protein_coding FLAG-S2-jox2017_R1_peak_431 chrUextra 28683929 28684162 + 21 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_237 chr3R 18359983 18360122 + 21 NA intron (FBgn0038983, intron 1 of 4) protein_coding-intron (FBgn0038983, intron 1 of 4) -2408 FBgn0053093 FBgn0053093 FBtr0084287 CG33093 protein_coding FLAG-S2-jox2017_R1_peak_400 chrUextra 28408028 28408167 + 21 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_30 chr2L 13442783 13442934 + 20 NA intron (FBgn0263354, intron 2 of 8) protein_coding-intron (FBgn0263354, intron 2 of 8) 2793 FBgn0032524 FBgn0032524 FBtr0080519 CG9267 protein_coding FLAG-S2-jox2017_R1_peak_228 chr3R 15434504 15434643 + 20 NA exon (FBgn0038717, exon 5 of 6) protein_coding-exon (FBgn0038717, exon 5 of 6) -1374 FBgn0038718 FBgn0038718 FBtr0083779 CG17752 protein_coding FLAG-S2-jox2017_R1_peak_45 chr2L 19553647 19553790 + 20 NA exon (FBgn0041180, exon 5 of 7) protein_coding-exon (FBgn0041180, exon 5 of 7) -4329 FBgn0032808 FBgn0032808 FBtr0331331 CG13079 protein_coding FLAG-S2-jox2017_R1_peak_25 chr2L 11111652 11111796 + 20 NA TTS (FBgn0261983) protein_coding-TTS (FBgn0261983) 1339 FBgn0032343 FBgn0032343 FBtr0080229 CG6201 protein_coding FLAG-S2-jox2017_R1_peak_12 chr2L 5034174 5034313 + 19 NA exon (FBgn0000299, exon 7 of 9) protein_coding-exon (FBgn0000299, exon 7 of 9) -3810 FBgn0260451 FBgn0260451 FBtr0110984 CG14042 protein_coding FLAG-S2-jox2017_R1_peak_292 chrUextra 8366540 8366679 + 19 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_203 chr3R 6887138 6887314 + 19 NA Intergenic Intergenic -26916 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding FLAG-S2-jox2017_R1_peak_189 chr3R 1458598 1458805 + 19 NA promoter-TSS (FBgn0037354) protein_coding-promoter-TSS (FBgn0037354) -645 FBgn0037354 FBgn0037354 FBtr0078708 CG12171 protein_coding FLAG-S2-jox2017_R1_peak_164 chr3L 18539524 18539663 + 19 NA Intergenic Intergenic -13765 FBgn0036790 FBgn0036790 FBtr0089578 star1 protein_coding FLAG-S2-jox2017_R1_peak_82 chr2R 9667020 9667159 + 19 NA exon (FBgn0033868, exon 1 of 1) protein_coding-exon (FBgn0033868, exon 1 of 1) 661 FBgn0033868 FBgn0033868 FBtr0332255 S-Lap7 protein_coding FLAG-S2-jox2017_R1_peak_515 chrX 19191802 19191941 + 19 NA exon (FBgn0031011, exon 1 of 4) protein_coding-exon (FBgn0031011, exon 1 of 4) 4035 FBgn0065084 FBgn0065084 FBtr0091699 snmRNA:763 ncRNA FLAG-S2-jox2017_R1_peak_6 chr2L 4260318 4260457 + 19 NA Intergenic Intergenic 2815 FBgn0031591 FBgn0031591 FBtr0077471 CG15425 protein_coding FLAG-S2-jox2017_R1_peak_54 chr2R 3562940 3563102 + 18 NA TTS (FBgn0033209) protein_coding-TTS (FBgn0033209) 836 FBgn0033210 FBgn0033210 FBtr0088941 U2A protein_coding FLAG-S2-jox2017_R1_peak_385 chrUextra 27997761 27998021 + 18 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_360 chrUextra 25668126 25668265 + 17 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_1 chr2L 153303 153442 + 17 NA promoter-TSS (FBgn0259818) protein_coding-promoter-TSS (FBgn0259818) -84 FBgn0259818 FBgn0259818 FBtr0330643 CG42399 protein_coding FLAG-S2-jox2017_R1_peak_318 chrUextra 14099529 14099668 + 17 NA NA NA NA NA FLAG-S2-jox2017_R1_peak_144 chr3L 10910931 10911107 + 15 NA Intergenic Intergenic -18796 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding FLAG-S2-jox2017_R1_peak_102 chr2R 17425928 17426067 + 15 NA promoter-TSS (FBgn0050287) protein_coding-promoter-TSS (FBgn0050287) -477 FBgn0050287 FBgn0050287 FBtr0071695 CG30287 protein_coding