PeakID (cmd=annotatePeaks.pl CG8478-S2-modencode_R1_peaks.narrowPeak dm3.fa -gid -gtf Drosophila_melanogaster.BDGP5.78.chr.gtf -cpu 6) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type CG8478-S2-modencode_R1_peak_302 chr3L 377849 378555 + 329 NA promoter-TSS (FBgn0262139) protein_coding-promoter-TSS (FBgn0262139) -886 FBgn0262139 FBgn0262139 FBtr0333902 trh protein_coding CG8478-S2-modencode_R1_peak_770 chrX 9587750 9588315 + 303 NA promoter-TSS (FBgn0000233) protein_coding-promoter-TSS (FBgn0000233) -189 FBgn0000233 FBgn0000233 FBtr0071379 btd protein_coding CG8478-S2-modencode_R1_peak_270 chr2R 15993900 15994359 + 296 NA Intergenic Intergenic -4887 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding CG8478-S2-modencode_R1_peak_806 chrX 12558411 12559653 + 271 NA intron (FBgn0011837, intron 2 of 3) protein_coding-intron (FBgn0011837, intron 2 of 3) 5537 FBgn0053963 FBgn0053963 FBtr0100004 CR33963 ncRNA CG8478-S2-modencode_R1_peak_40 chr2L 5461005 5461796 + 265 NA promoter-TSS (FBgn0261963) protein_coding-promoter-TSS (FBgn0261963) -241 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding CG8478-S2-modencode_R1_peak_659 chrM 17078 17448 + 246 NA NA NA NA NA CG8478-S2-modencode_R1_peak_840 chrX 17662180 17662629 + 246 NA Intergenic Intergenic -1012 FBgn0024184 FBgn0024184 FBtr0074460 unc-4 protein_coding CG8478-S2-modencode_R1_peak_539 chr3R 12589427 12590093 + 237 NA promoter-TSS (FBgn0084245) ncRNA-promoter-TSS (FBgn0084245) -319 FBgn0084245 FBgn0084245 FBtr0113490 tre-3 ncRNA CG8478-S2-modencode_R1_peak_815 chrX 12645764 12646797 + 229 NA Intergenic Intergenic 5930 FBgn0030418 FBgn0030418 FBtr0333722 CG4004 protein_coding CG8478-S2-modencode_R1_peak_538 chr3R 12528488 12528933 + 228 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) 31638 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding CG8478-S2-modencode_R1_peak_626 chr3R 25381851 25382135 + 225 NA promoter-TSS (FBgn0000492) protein_coding-promoter-TSS (FBgn0000492) -116 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding CG8478-S2-modencode_R1_peak_82 chr2L 12586838 12587178 + 212 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -31340 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding CG8478-S2-modencode_R1_peak_516 chr3R 8889686 8890347 + 211 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 6535 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding CG8478-S2-modencode_R1_peak_749 chrX 8544809 8545265 + 211 NA promoter-TSS (FBgn0004102) protein_coding-promoter-TSS (FBgn0004102) -323 FBgn0004102 FBgn0004102 FBtr0331305 oc protein_coding CG8478-S2-modencode_R1_peak_208 chr2R 9844378 9845831 + 206 NA TTS (FBgn0033886) protein_coding-TTS (FBgn0033886) 490 FBgn0262739 FBgn0262739 FBtr0087613 AGO1 protein_coding CG8478-S2-modencode_R1_peak_408 chr3L 17995973 17996593 + 206 NA promoter-TSS (FBgn0086081) snoRNA-promoter-TSS (FBgn0086081) -105 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_830 chrX 16041646 16042248 + 202 NA exon (FBgn0042650, exon 1 of 4) protein_coding-exon (FBgn0042650, exon 1 of 4) -23582 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding CG8478-S2-modencode_R1_peak_716 chrX 4319053 4319417 + 194 NA intron (FBgn0000179, intron 1 of 7) protein_coding-intron (FBgn0000179, intron 1 of 7) 12346 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding CG8478-S2-modencode_R1_peak_69 chr2L 11445707 11446576 + 193 NA promoter-TSS (FBgn0261648) protein_coding-promoter-TSS (FBgn0261648) -538 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding CG8478-S2-modencode_R1_peak_637 chr3R 26625956 26626440 + 188 NA exon (FBgn0011739, exon 2 of 8) protein_coding-exon (FBgn0011739, exon 2 of 8) 6143 FBgn0011739 FBgn0011739 FBtr0085720 wts protein_coding CG8478-S2-modencode_R1_peak_97 chr2L 20770412 20770755 + 187 NA promoter-TSS (FBgn0000251) protein_coding-promoter-TSS (FBgn0000251) -311 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding CG8478-S2-modencode_R1_peak_715 chrX 4305466 4305914 + 186 NA intron (FBgn0052773, intron 3 of 4) protein_coding-intron (FBgn0052773, intron 3 of 4) -1199 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding CG8478-S2-modencode_R1_peak_386 chr3L 14124608 14125181 + 186 NA promoter-TSS (FBgn0042630) protein_coding-promoter-TSS (FBgn0042630) -497 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding CG8478-S2-modencode_R1_peak_832 chrX 16110790 16111865 + 186 NA promoter-TSS (FBgn0000459) protein_coding-promoter-TSS (FBgn0000459) -548 FBgn0000459 FBgn0000459 FBtr0100384 disco protein_coding CG8478-S2-modencode_R1_peak_642 chr3R 26738105 26738537 + 184 NA promoter-TSS (FBgn0020912) protein_coding-promoter-TSS (FBgn0020912) -289 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding CG8478-S2-modencode_R1_peak_441 chr3R 678022 678469 + 184 NA promoter-TSS (FBgn0003002) protein_coding-promoter-TSS (FBgn0003002) -290 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding CG8478-S2-modencode_R1_peak_275 chr2R 16885397 16885905 + 183 NA intron (FBgn0034570, intron 1 of 6) protein_coding-intron (FBgn0034570, intron 1 of 6) 1926 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding CG8478-S2-modencode_R1_peak_10 chr2L 1644373 1644785 + 180 NA Intergenic Intergenic -6679 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_256 chr2R 14540253 14540706 + 179 NA promoter-TSS (FBgn0034371) protein_coding-promoter-TSS (FBgn0034371) -200 FBgn0034371 FBgn0034371 FBtr0086658 SP2637 protein_coding CG8478-S2-modencode_R1_peak_131 chr2R 4519899 4520415 + 171 NA promoter-TSS (FBgn0033317) protein_coding-promoter-TSS (FBgn0033317) -690 FBgn0033317 FBgn0033317 FBtr0088727 CG8635 protein_coding CG8478-S2-modencode_R1_peak_363 chr3L 10849681 10850093 + 171 NA Intergenic Intergenic -1617 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_675 chrX 1293600 1294053 + 170 NA Intergenic Intergenic 6739 FBgn0024985 FBgn0024985 FBtr0332292 CG11448 protein_coding CG8478-S2-modencode_R1_peak_854 chrX 19760274 19760899 + 170 NA intron (FBgn0052529, intron 1 of 8) protein_coding-intron (FBgn0052529, intron 1 of 8) 407 FBgn0052529 FBgn0052529 FBtr0306523 Hers protein_coding CG8478-S2-modencode_R1_peak_720 chrX 5454613 5454921 + 169 NA promoter-TSS (FBgn0263512) protein_coding-promoter-TSS (FBgn0263512) -551 FBgn0263512 FBgn0263512 FBtr0100024 Vsx2 protein_coding CG8478-S2-modencode_R1_peak_440 chr3R 660951 661298 + 162 NA Intergenic Intergenic -4105 FBgn0037284 FBgn0037284 FBtr0078873 CG14659 protein_coding CG8478-S2-modencode_R1_peak_180 chr2R 7415428 7416141 + 162 NA promoter-TSS (FBgn0000577) protein_coding-promoter-TSS (FBgn0000577) -396 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding CG8478-S2-modencode_R1_peak_38 chr2L 5403544 5404006 + 161 NA promoter-TSS (FBgn0016660) protein_coding-promoter-TSS (FBgn0016660) -567 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding CG8478-S2-modencode_R1_peak_722 chrX 5640724 5641206 + 161 NA promoter-TSS (FBgn0029798) protein_coding-promoter-TSS (FBgn0029798) 322 FBgn0261383 FBgn0261383 FBtr0070842 IntS6 protein_coding CG8478-S2-modencode_R1_peak_767 chrX 9580386 9581105 + 159 NA promoter-TSS (FBgn0261617) protein_coding-promoter-TSS (FBgn0261617) -54 FBgn0261617 FBgn0261617 FBtr0302722 nej protein_coding CG8478-S2-modencode_R1_peak_809 chrX 12628474 12630630 + 159 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 6925 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding CG8478-S2-modencode_R1_peak_232 chr2R 12716262 12716568 + 159 NA promoter-TSS (FBgn0263659) ncRNA-promoter-TSS (FBgn0263659) -1780 FBgn0263659 FBgn0263659 FBtr0310103 CR43650 ncRNA CG8478-S2-modencode_R1_peak_713 chrX 3755214 3755578 + 157 NA exon (FBgn0019661, exon 1 of 1) ncRNA-exon (FBgn0019661, exon 1 of 1) 1062 FBgn0019661 FBgn0019661 FBtr0070634 roX1 ncRNA CG8478-S2-modencode_R1_peak_381 chr3L 12686133 12686581 + 155 NA promoter-TSS (FBgn0014343) protein_coding-promoter-TSS (FBgn0014343) -382 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding CG8478-S2-modencode_R1_peak_859 chrX 20053037 20053606 + 154 NA exon (FBgn0031090, exon 1 of 3) protein_coding-exon (FBgn0031090, exon 1 of 3) 584 FBgn0031090 FBgn0031090 FBtr0333548 Rab35 protein_coding CG8478-S2-modencode_R1_peak_415 chr3L 18752261 18752695 + 153 NA intron (FBgn0001078, intron 1 of 7) protein_coding-intron (FBgn0001078, intron 3 of 9) 6366 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding CG8478-S2-modencode_R1_peak_517 chr3R 9700693 9701068 + 153 NA promoter-TSS (FBgn0008646) protein_coding-promoter-TSS (FBgn0008646) -242 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding CG8478-S2-modencode_R1_peak_273 chr2R 16791035 16791302 + 153 NA promoter-TSS (FBgn0015524) protein_coding-promoter-TSS (FBgn0015524) -268 FBgn0015524 FBgn0015524 FBtr0110772 otp protein_coding CG8478-S2-modencode_R1_peak_752 chrX 8700567 8701156 + 153 NA Intergenic Intergenic -21475 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding CG8478-S2-modencode_R1_peak_15 chr2L 1972585 1972991 + 150 NA Intergenic Intergenic -1338 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding CG8478-S2-modencode_R1_peak_90 chr2L 16485818 16486766 + 146 NA promoter-TSS (FBgn0005677) protein_coding-promoter-TSS (FBgn0005677) -308 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding CG8478-S2-modencode_R1_peak_388 chr3L 14355921 14357147 + 145 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) 6273 FBgn0036421 FBgn0036421 FBtr0113170 CG13481 protein_coding CG8478-S2-modencode_R1_peak_472 chr3R 4636585 4637436 + 145 NA intron (FBgn0037635, intron 1 of 1) protein_coding-intron (FBgn0037635, intron 1 of 1) -1477 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding CG8478-S2-modencode_R1_peak_729 chrX 7098630 7099134 + 145 NA intron (FBgn0029939, intron 1 of 3) protein_coding-intron (FBgn0029939, intron 2 of 5) 8820 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding CG8478-S2-modencode_R1_peak_3 chr2L 5504 6046 + 144 NA Intergenic Intergenic -1754 FBgn0031208 FBgn0031208 FBtr0330654 CG11023 protein_coding CG8478-S2-modencode_R1_peak_14 chr2L 1970412 1970805 + 144 NA promoter-TSS (FBgn0031375) protein_coding-promoter-TSS (FBgn0031375) -3518 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding CG8478-S2-modencode_R1_peak_321 chr3L 1178028 1178588 + 143 NA Intergenic Intergenic -1032 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding CG8478-S2-modencode_R1_peak_378 chr3L 12602313 12602847 + 143 NA promoter-TSS (FBgn0015919) protein_coding-promoter-TSS (FBgn0015919) -151 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding CG8478-S2-modencode_R1_peak_677 chrX 1515854 1516273 + 142 NA promoter-TSS (FBgn0000210) protein_coding-promoter-TSS (FBgn0000210) -3875 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding CG8478-S2-modencode_R1_peak_285 chr2R 18129556 18130440 + 141 NA Intergenic Intergenic -14274 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding CG8478-S2-modencode_R1_peak_500 chr3R 6442469 6443145 + 140 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -11415 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding CG8478-S2-modencode_R1_peak_179 chr2R 7362779 7363259 + 140 NA promoter-TSS (FBgn0001269) protein_coding-promoter-TSS (FBgn0001269) -191 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding CG8478-S2-modencode_R1_peak_630 chr3R 25598361 25599093 + 139 NA exon (FBgn0001297, exon 1 of 3) protein_coding-exon (FBgn0001297, exon 1 of 3) 7726 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding CG8478-S2-modencode_R1_peak_398 chr3L 17480202 17480552 + 139 NA intron (FBgn0036732, intron 1 of 8) protein_coding-intron (FBgn0036732, intron 1 of 8) 159 FBgn0036732 FBgn0036732 FBtr0302041 Oatp74D protein_coding CG8478-S2-modencode_R1_peak_83 chr2L 12618051 12618374 + 139 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -136 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding CG8478-S2-modencode_R1_peak_671 chrUextra 19603922 19604022 + 138 NA NA NA NA NA CG8478-S2-modencode_R1_peak_655 chrM 10345 10438 + 138 NA NA NA NA NA CG8478-S2-modencode_R1_peak_566 chr3R 17260029 17260277 + 138 NA promoter-TSS (FBgn0008651) protein_coding-promoter-TSS (FBgn0008651) -298 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding CG8478-S2-modencode_R1_peak_499 chr3R 6439973 6440422 + 138 NA promoter-TSS (FBgn0001235) protein_coding-promoter-TSS (FBgn0001235) -8805 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding CG8478-S2-modencode_R1_peak_560 chr3R 16087259 16087705 + 137 NA intron (FBgn0262582, intron 2 of 18) protein_coding-intron (FBgn0262582, intron 2 of 18) -31505 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding CG8478-S2-modencode_R1_peak_110 chr2R 1614328 1614812 + 137 NA promoter-TSS (FBgn0000099) protein_coding-promoter-TSS (FBgn0000099) -10016 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding CG8478-S2-modencode_R1_peak_283 chr2R 17771583 17772177 + 136 NA intron (FBgn0085397, intron 1 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 1063 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding CG8478-S2-modencode_R1_peak_217 chr2R 10345540 10345867 + 135 NA promoter-TSS (FBgn0261613) protein_coding-promoter-TSS (FBgn0261613) 22299 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding CG8478-S2-modencode_R1_peak_501 chr3R 6447940 6448222 + 135 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -16689 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding CG8478-S2-modencode_R1_peak_303 chr3L 432590 432890 + 135 NA TTS (FBgn0035139) protein_coding-TTS (FBgn0035139) 1166 FBgn0035139 FBgn0035139 FBtr0072566 CG13891 protein_coding CG8478-S2-modencode_R1_peak_11 chr2L 1666821 1667043 + 135 NA promoter-TSS (FBgn0086758) protein_coding-promoter-TSS (FBgn0086758) 15674 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_459 chr3R 2826372 2826805 + 134 NA Intergenic Intergenic -51469 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding CG8478-S2-modencode_R1_peak_782 chrX 10367429 10368660 + 133 NA promoter-TSS (FBgn0030206) protein_coding-promoter-TSS (FBgn0030206) -424 FBgn0261710 FBgn0261710 FBtr0307488 nocte protein_coding CG8478-S2-modencode_R1_peak_764 chrX 9578464 9579298 + 133 NA intron (FBgn0261617, intron 1 of 13) protein_coding-intron (FBgn0261617, intron 1 of 13) 1810 FBgn0261617 FBgn0261617 FBtr0302722 nej protein_coding CG8478-S2-modencode_R1_peak_589 chr3R 19883077 19883241 + 131 NA promoter-TSS (FBgn0040283) protein_coding-promoter-TSS (FBgn0040283) -130 FBgn0001230 FBgn0001230 FBtr0084589 Hsp68 protein_coding CG8478-S2-modencode_R1_peak_658 chrM 15479 15788 + 130 NA NA NA NA NA CG8478-S2-modencode_R1_peak_529 chr3R 11112331 11112805 + 130 NA intron (FBgn0003721, intron 4 of 11) protein_coding-intron (FBgn0003721, intron 3 of 9) 5296 FBgn0003721 FBgn0003721 FBtr0305656 Tm1 protein_coding CG8478-S2-modencode_R1_peak_105 chr2L 22024494 22024804 + 127 NA TTS (FBgn0028979) protein_coding-TTS (FBgn0028979) 4614 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding CG8478-S2-modencode_R1_peak_586 chr3R 19200553 19200828 + 127 NA TTS (FBgn0262010) protein_coding-TTS (FBgn0262010) 1265 FBgn0262010 FBgn0262010 FBtr0303835 CG42828 protein_coding CG8478-S2-modencode_R1_peak_8 chr2L 594787 595278 + 126 NA promoter-TSS (FBgn0010323) protein_coding-promoter-TSS (FBgn0010323) -222 FBgn0010323 FBgn0010323 FBtr0078072 Gsc protein_coding CG8478-S2-modencode_R1_peak_85 chr2L 14020430 14020930 + 125 NA promoter-TSS (FBgn0001967) protein_coding-promoter-TSS (FBgn0001967) -472 FBgn0001967 FBgn0001967 FBtr0290243 nimC3 protein_coding CG8478-S2-modencode_R1_peak_490 chr3R 5912905 5913490 + 125 NA Intergenic Intergenic -3706 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_193 chr2R 8771689 8772193 + 125 NA exon (FBgn0003975, exon 1 of 8) protein_coding-exon (FBgn0003975, exon 1 of 8) 235 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding CG8478-S2-modencode_R1_peak_530 chr3R 11619232 11620400 + 124 NA TTS (FBgn0038363) protein_coding-TTS (FBgn0038363) 277 FBgn0262527 FBgn0262527 FBtr0309863 wah protein_coding CG8478-S2-modencode_R1_peak_841 chrX 17683345 17683839 + 123 NA Intergenic Intergenic -1491 FBgn0026058 FBgn0026058 FBtr0074461 OdsH protein_coding CG8478-S2-modencode_R1_peak_199 chr2R 8843356 8843576 + 123 NA TTS (FBgn0033787) protein_coding-TTS (FBgn0033787) 2405 FBgn0033787 FBgn0033787 FBtr0087792 CG13321 protein_coding CG8478-S2-modencode_R1_peak_721 chrX 5487890 5488224 + 123 NA promoter-TSS (FBgn0263511) protein_coding-promoter-TSS (FBgn0263511) -249 FBgn0263511 FBgn0263511 FBtr0070781 Vsx1 protein_coding CG8478-S2-modencode_R1_peak_717 chrX 4320736 4321058 + 123 NA promoter-TSS (FBgn0000179) protein_coding-promoter-TSS (FBgn0000179) 14008 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding CG8478-S2-modencode_R1_peak_657 chrM 13515 13622 + 123 NA NA NA NA NA CG8478-S2-modencode_R1_peak_823 chrX 13783540 13784057 + 123 NA intron (FBgn0263115, intron 3 of 7) protein_coding-intron (FBgn0263115, intron 2 of 4) -32641 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding CG8478-S2-modencode_R1_peak_271 chr2R 15998590 15998977 + 122 NA promoter-TSS (FBgn0004364) protein_coding-promoter-TSS (FBgn0004364) -233 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding CG8478-S2-modencode_R1_peak_446 chr3R 2159215 2159495 + 121 NA Intergenic Intergenic -1731 FBgn0037429 FBgn0037429 FBtr0301493 Osi19 protein_coding CG8478-S2-modencode_R1_peak_783 chrX 10418466 10419103 + 120 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) -38124 FBgn0052687 FBgn0052687 FBtr0071458 CG32687 protein_coding CG8478-S2-modencode_R1_peak_567 chr3R 17272076 17272435 + 117 NA promoter-TSS (FBgn0011278) protein_coding-promoter-TSS (FBgn0011278) -213 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding CG8478-S2-modencode_R1_peak_829 chrX 15754454 15754881 + 116 NA intron (FBgn0001105, intron 1 of 2) protein_coding-intron (FBgn0001105, intron 1 of 3) 519 FBgn0001105 FBgn0001105 FBtr0074107 Gbeta13F protein_coding CG8478-S2-modencode_R1_peak_665 chrUextra 7039506 7039645 + 116 NA NA NA NA NA CG8478-S2-modencode_R1_peak_684 chrX 2051915 2052875 + 115 NA TTS (FBgn0005670) protein_coding-TTS (FBgn0005670) -2418 FBgn0004655 FBgn0004655 FBtr0070430 wapl protein_coding CG8478-S2-modencode_R1_peak_536 chr3R 12229229 12229790 + 115 NA promoter-TSS (FBgn0003513) protein_coding-promoter-TSS (FBgn0003513) -97 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding CG8478-S2-modencode_R1_peak_4 chr2L 129226 129452 + 114 NA promoter-TSS (FBgn0025683) protein_coding-promoter-TSS (FBgn0025683) -98 FBgn0025683 FBgn0025683 FBtr0100379 CG3164 protein_coding CG8478-S2-modencode_R1_peak_159 chr2R 6456105 6456657 + 112 NA promoter-TSS (FBgn0263102) protein_coding-promoter-TSS (FBgn0263102) 10988 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_690 chrX 3275077 3275657 + 112 NA intron (FBgn0262656, intron 2 of 2) protein_coding-intron (FBgn0262656, intron 2 of 2) 8175 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_195 chr2R 8791673 8792129 + 112 NA Intergenic Intergenic -11601 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding CG8478-S2-modencode_R1_peak_127 chr2R 3906341 3906721 + 111 NA Intergenic Intergenic 3721 FBgn0263572 FBgn0263572 FBtr0309728 mir-4981 pre_miRNA CG8478-S2-modencode_R1_peak_533 chr3R 11851351 11852022 + 111 NA promoter-TSS (FBgn0003117) protein_coding-promoter-TSS (FBgn0003117) -8426 FBgn0003117 FBgn0003117 FBtr0083221 pnr protein_coding CG8478-S2-modencode_R1_peak_60 chr2L 8825255 8825611 + 110 NA promoter-TSS (FBgn0029123) protein_coding-promoter-TSS (FBgn0029123) -192 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding CG8478-S2-modencode_R1_peak_31 chr2L 5292444 5292698 + 110 NA Intergenic Intergenic -13151 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_262 chr2R 15156275 15156588 + 109 NA Intergenic Intergenic -6800 FBgn0003254 FBgn0003254 FBtr0330058 rib protein_coding CG8478-S2-modencode_R1_peak_336 chr3L 5763836 5764255 + 108 NA promoter-TSS (FBgn0260936) protein_coding-promoter-TSS (FBgn0260936) -220 FBgn0260936 FBgn0260936 FBtr0330127 scny protein_coding CG8478-S2-modencode_R1_peak_326 chr3L 3035214 3035666 + 108 NA promoter-TSS (FBgn0035388) protein_coding-promoter-TSS (FBgn0035388) -553 FBgn0035388 FBgn0035388 FBtr0300175 CG2162 protein_coding CG8478-S2-modencode_R1_peak_648 chr4 1010024 1010438 + 108 NA promoter-TSS (FBgn0019650) protein_coding-promoter-TSS (FBgn0019650) -120 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding CG8478-S2-modencode_R1_peak_541 chr3R 12673020 12673195 + 107 NA intron (FBgn0263610, intron 5 of 7) ncRNA-intron (FBgn0263610, intron 4 of 6) -2619 FBgn0020546 FBgn0020546 FBtr0083363 iab-4 ncRNA CG8478-S2-modencode_R1_peak_402 chr3L 17563278 17563750 + 107 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -4252 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_308 chr3L 626098 627154 + 106 NA Intergenic Intergenic -1844 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_724 chrX 5907322 5907707 + 104 NA promoter-TSS (FBgn0029003) protein_coding-promoter-TSS (FBgn0029003) -303 FBgn0029003 FBgn0029003 FBtr0070890 mab-21 protein_coding CG8478-S2-modencode_R1_peak_89 chr2L 16422568 16423217 + 104 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -5008 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA CG8478-S2-modencode_R1_peak_427 chr3L 21472707 21473004 + 104 NA Intergenic Intergenic -3276 FBgn0014143 FBgn0014143 FBtr0078395 croc protein_coding CG8478-S2-modencode_R1_peak_239 chr2R 13339420 13340038 + 103 NA intron (FBgn0028956, intron 1 of 8) protein_coding-intron (FBgn0028956, intron 1 of 8) 370 FBgn0028956 FBgn0028956 FBtr0086955 mthl3 protein_coding CG8478-S2-modencode_R1_peak_24 chr2L 3540021 3540383 + 103 NA intron (FBgn0024244, intron 1 of 2) protein_coding-intron (FBgn0024244, intron 1 of 2) 467 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding CG8478-S2-modencode_R1_peak_550 chr3R 14273805 14274114 + 102 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) -36606 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_732 chrX 7521016 7521437 + 102 NA intron (FBgn0004198, intron 1 of 6) protein_coding-intron (FBgn0004198, intron 1 of 6) 18045 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding CG8478-S2-modencode_R1_peak_825 chrX 13888960 13889487 + 102 NA Intergenic Intergenic -1467 FBgn0000173 FBgn0000173 FBtr0332844 ben protein_coding CG8478-S2-modencode_R1_peak_338 chr3L 6735418 6735623 + 102 NA intron (FBgn0261934, intron 1 of 9) protein_coding-intron (FBgn0261934, intron 1 of 4) 744 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding CG8478-S2-modencode_R1_peak_748 chrX 8518853 8519143 + 102 NA Intergenic Intergenic -18663 FBgn0030054 FBgn0030054 FBtr0071228 Caf1-180 protein_coding CG8478-S2-modencode_R1_peak_150 chr2R 6310727 6311291 + 100 NA promoter-TSS (FBgn0033520) protein_coding-promoter-TSS (FBgn0033520) -932 FBgn0033520 FBgn0033520 FBtr0088261 Prx2540-1 protein_coding CG8478-S2-modencode_R1_peak_61 chr2L 9176073 9176374 + 100 NA promoter-TSS (FBgn0041092) protein_coding-promoter-TSS (FBgn0041092) 9445 FBgn0041092 FBgn0041092 FBtr0303872 tai protein_coding CG8478-S2-modencode_R1_peak_47 chr2L 7306804 7307125 + 100 NA promoter-TSS (FBgn0004009) protein_coding-promoter-TSS (FBgn0004009) -197 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding CG8478-S2-modencode_R1_peak_178 chr2R 7356836 7357298 + 100 NA Intergenic Intergenic -6143 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding CG8478-S2-modencode_R1_peak_595 chr3R 20455684 20456150 + 99 NA promoter-TSS (FBgn0039213) protein_coding-promoter-TSS (FBgn0039213) -101 FBgn0039213 FBgn0039213 FBtr0084657 atl protein_coding CG8478-S2-modencode_R1_peak_763 chrX 9560573 9560874 + 99 NA exon (FBgn0261617, exon 14 of 14) protein_coding-exon (FBgn0261617, exon 14 of 14) -3932 FBgn0030148 FBgn0030148 FBtr0071403 CG3106 protein_coding CG8478-S2-modencode_R1_peak_777 chrX 10250563 10251068 + 99 NA TTS (FBgn0028331) protein_coding-TTS (FBgn0028331) 8612 FBgn0065046 FBgn0065046 FBtr0091641 snoRNA:U3:9B snoRNA CG8478-S2-modencode_R1_peak_604 chr3R 21929157 21929435 + 99 NA Intergenic Intergenic -4863 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_549 chr3R 14069650 14070529 + 99 NA intron (FBgn0020238, intron 1 of 3) protein_coding-intron (FBgn0020238, intron 1 of 3) 1836 FBgn0020238 FBgn0020238 FBtr0083567 14-3-3epsilon protein_coding CG8478-S2-modencode_R1_peak_540 chr3R 12655830 12656041 + 99 NA promoter-TSS (FBgn0000014) protein_coding-promoter-TSS (FBgn0000014) -168 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding CG8478-S2-modencode_R1_peak_139 chr2R 5579852 5580550 + 98 NA exon (FBgn0023143, exon 1 of 4) protein_coding-exon (FBgn0023143, exon 1 of 4) 632 FBgn0023143 FBgn0023143 FBtr0310357 Uba1 protein_coding CG8478-S2-modencode_R1_peak_36 chr2L 5306619 5306898 + 97 NA intron (FBgn0016076, intron 1 of 2) protein_coding-intron (FBgn0016076, intron 1 of 2) 1036 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_149 chr2R 6308713 6309247 + 97 NA promoter-TSS (FBgn0053474) protein_coding-promoter-TSS (FBgn0053474) 216 FBgn0033519 FBgn0033519 FBtr0088316 CG11825 protein_coding CG8478-S2-modencode_R1_peak_423 chr3L 19784699 19785088 + 97 NA promoter-TSS (FBgn0261360) protein_coding-promoter-TSS (FBgn0261360) 1776 FBgn0261360 FBgn0261360 FBtr0302277 CG42637 protein_coding CG8478-S2-modencode_R1_peak_611 chr3R 22087265 22087492 + 96 NA promoter-TSS (FBgn0000064) protein_coding-promoter-TSS (FBgn0000064) -65 FBgn0000064 FBgn0000064 FBtr0085000 Ald protein_coding CG8478-S2-modencode_R1_peak_551 chr3R 14274378 14274790 + 96 NA intron (FBgn0004652, intron 2 of 7) protein_coding-intron (FBgn0004652, intron 2 of 7) -37231 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_258 chr2R 14577421 14577674 + 96 NA intron (FBgn0262103, intron 1 of 7) protein_coding-intron (FBgn0262103, intron 1 of 7) 1910 FBgn0262103 FBgn0262103 FBtr0304024 Sik3 protein_coding CG8478-S2-modencode_R1_peak_618 chr3R 23070855 23071308 + 96 NA promoter-TSS (FBgn0042111) protein_coding-promoter-TSS (FBgn0042111) -541 FBgn0042111 FBgn0042111 FBtr0333327 CG18766 protein_coding CG8478-S2-modencode_R1_peak_49 chr2L 7828082 7828816 + 95 NA intron (FBgn0004177, intron 1 of 3) protein_coding-intron (FBgn0004177, intron 1 of 3) 706 FBgn0004177 FBgn0004177 FBtr0079525 mts protein_coding CG8478-S2-modencode_R1_peak_30 chr2L 5093092 5093449 + 95 NA promoter-TSS (FBgn0031682) protein_coding-promoter-TSS (FBgn0031682) 322 FBgn0031681 FBgn0031681 FBtr0111024 pgant5 protein_coding CG8478-S2-modencode_R1_peak_543 chr3R 12774393 12774648 + 94 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -17185 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding CG8478-S2-modencode_R1_peak_780 chrX 10366746 10367165 + 93 NA intron (FBgn0261710, intron 1 of 5) protein_coding-intron (FBgn0261710, intron 1 of 5) 665 FBgn0261710 FBgn0261710 FBtr0307488 nocte protein_coding CG8478-S2-modencode_R1_peak_580 chr3R 19121243 19121390 + 93 NA promoter-TSS (FBgn0003118) protein_coding-promoter-TSS (FBgn0003118) -5405 FBgn0039071 FBgn0039071 FBtr0084382 CG4434 protein_coding CG8478-S2-modencode_R1_peak_534 chr3R 11925327 11925877 + 92 NA intron (FBgn0010379, intron 1 of 6) protein_coding-intron (FBgn0010379, intron 1 of 6) 664 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding CG8478-S2-modencode_R1_peak_453 chr3R 2674355 2674621 + 92 NA promoter-TSS (FBgn0003339) protein_coding-promoter-TSS (FBgn0003339) 1215 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding CG8478-S2-modencode_R1_peak_465 chr3R 4016675 4017012 + 92 NA Intergenic Intergenic 6590 FBgn0262994 FBgn0262994 FBtr0306837 CR43302 ncRNA CG8478-S2-modencode_R1_peak_329 chr3L 3418210 3418829 + 92 NA promoter-TSS (FBgn0014388) protein_coding-promoter-TSS (FBgn0014388) -592 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding CG8478-S2-modencode_R1_peak_55 chr2L 8084343 8084557 + 91 NA intron (FBgn0261822, intron 1 of 6) protein_coding-intron (FBgn0261822, intron 1 of 6) -1468 FBgn0020240 FBgn0020240 FBtr0079543 Mcr protein_coding CG8478-S2-modencode_R1_peak_758 chrX 9396213 9396752 + 90 NA TTS (FBgn0263508) ncRNA-TTS (FBgn0263508) 4051 FBgn0263508 FBgn0263508 FBtr0309529 CR43497 ncRNA CG8478-S2-modencode_R1_peak_383 chr3L 13995650 13996391 + 90 NA intron (FBgn0036398, intron 1 of 7) protein_coding-intron (FBgn0036398, intron 1 of 7) 793 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding CG8478-S2-modencode_R1_peak_746 chrX 8304388 8304559 + 88 NA promoter-TSS (FBgn0262976) protein_coding-promoter-TSS (FBgn0262976) -342 FBgn0262976 FBgn0262976 FBtr0307287 lawc protein_coding CG8478-S2-modencode_R1_peak_579 chr3R 19118772 19118981 + 88 NA intron (FBgn0003118, intron 6 of 8) protein_coding-intron (FBgn0003118, intron 1 of 3) -2965 FBgn0039071 FBgn0039071 FBtr0084382 CG4434 protein_coding CG8478-S2-modencode_R1_peak_265 chr2R 15343983 15344746 + 88 NA exon (FBgn0260934, exon 1 of 16) protein_coding-exon (FBgn0260934, exon 1 of 16) 664 FBgn0002716 FBgn0002716 FBtr0086461 mei-W68 protein_coding CG8478-S2-modencode_R1_peak_731 chrX 7498894 7499117 + 88 NA Intergenic Intergenic -4176 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding CG8478-S2-modencode_R1_peak_710 chrX 3674850 3675100 + 88 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) 3486 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_518 chr3R 9702925 9703287 + 88 NA Intergenic Intergenic -2468 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding CG8478-S2-modencode_R1_peak_510 chr3R 8543337 8544125 + 87 NA intron (FBgn0002719, intron 1 of 2) protein_coding-intron (FBgn0002719, intron 2 of 3) 1783 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_377 chr3L 12461203 12461497 + 87 NA promoter-TSS (FBgn0000625) protein_coding-promoter-TSS (FBgn0000625) -229 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding CG8478-S2-modencode_R1_peak_323 chr3L 2823446 2823945 + 86 NA intron (FBgn0263392, intron 5 of 10) protein_coding-intron (FBgn0263392, intron 4 of 9) 41440 FBgn0035375 FBgn0035375 FBtr0333442 pgant6 protein_coding CG8478-S2-modencode_R1_peak_310 chr3L 627831 628490 + 85 NA promoter-TSS (FBgn0263039) ncRNA-promoter-TSS (FBgn0263039) -310 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_488 chr3R 5908599 5908844 + 85 NA Intergenic Intergenic -7626 FBgn0037786 FBgn0037786 FBtr0309853 CG5361 protein_coding CG8478-S2-modencode_R1_peak_656 chrM 12050 12153 + 85 NA NA NA NA NA CG8478-S2-modencode_R1_peak_654 chrM 8952 9210 + 85 NA NA NA NA NA CG8478-S2-modencode_R1_peak_458 chr3R 2756091 2756472 + 85 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) 2281 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding CG8478-S2-modencode_R1_peak_417 chr3L 18793172 18793657 + 85 NA exon (FBgn0001078, exon 1 of 10) protein_coding-exon (FBgn0001078, exon 1 of 10) 20361 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_115 chr2R 2389232 2389461 + 84 NA promoter-TSS (FBgn0086655) protein_coding-promoter-TSS (FBgn0086655) 31754 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA CG8478-S2-modencode_R1_peak_452 chr3R 2617183 2617469 + 84 NA promoter-TSS (FBgn0000439) protein_coding-promoter-TSS (FBgn0000439) -232 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding CG8478-S2-modencode_R1_peak_683 chrX 2050037 2050293 + 83 NA promoter-TSS (FBgn0004655) protein_coding-promoter-TSS (FBgn0004655) -188 FBgn0004655 FBgn0004655 FBtr0070430 wapl protein_coding CG8478-S2-modencode_R1_peak_220 chr2R 10391639 10392191 + 83 NA promoter-TSS (FBgn0024698) protein_coding-promoter-TSS (FBgn0024698) 452 FBgn0261823 FBgn0261823 FBtr0100154 Asx protein_coding CG8478-S2-modencode_R1_peak_635 chr3R 26589824 26590243 + 83 NA Intergenic Intergenic -1615 FBgn0004606 FBgn0004606 FBtr0085702 zfh1 protein_coding CG8478-S2-modencode_R1_peak_484 chr3R 5550813 5551054 + 83 NA TTS (FBgn0262477) protein_coding-TTS (FBgn0262477) 400 FBgn0002431 FBgn0002431 FBtr0082090 hyd protein_coding CG8478-S2-modencode_R1_peak_124 chr2R 3622440 3623080 + 82 NA exon (FBgn0042135, exon 1 of 13) protein_coding-exon (FBgn0042135, exon 1 of 13) 364 FBgn0042135 FBgn0042135 FBtr0330328 CG18812 protein_coding CG8478-S2-modencode_R1_peak_181 chr2R 7417051 7417294 + 81 NA Intergenic Intergenic -1784 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding CG8478-S2-modencode_R1_peak_745 chrX 7987363 7987602 + 81 NA intron (FBgn0029996, intron 1 of 1) protein_coding-intron (FBgn0029996, intron 1 of 1) -1357 FBgn0029996 FBgn0029996 FBtr0071114 Ubc-E2H protein_coding CG8478-S2-modencode_R1_peak_850 chrX 19473077 19473306 + 81 NA intron (FBgn0031030, intron 1 of 12) protein_coding-intron (FBgn0031030, intron 1 of 12) 582 FBgn0031030 FBgn0031030 FBtr0309237 Tao protein_coding CG8478-S2-modencode_R1_peak_804 chrX 12548362 12548642 + 80 NA promoter-TSS (FBgn0015024) protein_coding-promoter-TSS (FBgn0015024) 686 FBgn0015024 FBgn0015024 FBtr0073682 CkIalpha protein_coding CG8478-S2-modencode_R1_peak_522 chr3R 10548091 10548291 + 80 NA intron (FBgn0262127, intron 1 of 8) protein_coding-intron (FBgn0262127, intron 1 of 8) 1787 FBgn0262127 FBgn0262127 FBtr0100008 kibra protein_coding CG8478-S2-modencode_R1_peak_450 chr3R 2504361 2504577 + 80 NA promoter-TSS (FBgn0002522) protein_coding-promoter-TSS (FBgn0002522) -5703 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding CG8478-S2-modencode_R1_peak_706 chrX 3671375 3671634 + 80 NA promoter-TSS (FBgn0263532) pre_miRNA-promoter-TSS (FBgn0263532) 15 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_126 chr2R 3901887 3902080 + 80 NA promoter-TSS (FBgn0033250) protein_coding-promoter-TSS (FBgn0033250) -724 FBgn0033250 FBgn0033250 FBtr0304750 CG14762 protein_coding CG8478-S2-modencode_R1_peak_816 chrX 12647603 12648245 + 79 NA Intergenic Intergenic 6726 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding CG8478-S2-modencode_R1_peak_59 chr2L 8691458 8691923 + 79 NA promoter-TSS (FBgn0004914) protein_coding-promoter-TSS (FBgn0004914) 5459 FBgn0260861 FBgn0260861 FBtr0079730 Trs23 protein_coding CG8478-S2-modencode_R1_peak_526 chr3R 10566491 10566736 + 79 NA promoter-TSS (FBgn0263929) protein_coding-promoter-TSS (FBgn0263929) -127 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding CG8478-S2-modencode_R1_peak_587 chr3R 19697117 19697287 + 79 NA intron (FBgn0025574, intron 2 of 9) protein_coding-intron (FBgn0025574, intron 2 of 9) -11850 FBgn0004185 FBgn0004185 FBtr0084528 snRNA:U1:95Ca snRNA CG8478-S2-modencode_R1_peak_414 chr3L 18393233 18393427 + 78 NA Intergenic Intergenic -1795 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding CG8478-S2-modencode_R1_peak_416 chr3L 18784284 18784545 + 77 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -25570 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding CG8478-S2-modencode_R1_peak_812 chrX 12644789 12644996 + 77 NA Intergenic Intergenic 4542 FBgn0030418 FBgn0030418 FBtr0333722 CG4004 protein_coding CG8478-S2-modencode_R1_peak_504 chr3R 8106466 8106967 + 77 NA promoter-TSS (FBgn0003651) protein_coding-promoter-TSS (FBgn0003651) -158 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding CG8478-S2-modencode_R1_peak_544 chr3R 12881966 12882728 + 77 NA intron (FBgn0020493, intron 2 of 7) protein_coding-intron (FBgn0020493, intron 2 of 7) 2618 FBgn0020493 FBgn0020493 FBtr0083394 Dad protein_coding CG8478-S2-modencode_R1_peak_803 chrX 12544002 12544191 + 77 NA intron (FBgn0030412, intron 14 of 22) protein_coding-intron (FBgn0030412, intron 14 of 22) -3720 FBgn0015024 FBgn0015024 FBtr0073682 CkIalpha protein_coding CG8478-S2-modencode_R1_peak_624 chr3R 25032623 25032967 + 77 NA Intergenic Intergenic -2940 FBgn0039651 FBgn0039651 FBtr0085406 CG14508 protein_coding CG8478-S2-modencode_R1_peak_166 chr2R 6959256 6959490 + 77 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -13718 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_306 chr3L 548912 549521 + 76 NA intron (FBgn0035142, intron 2 of 10) protein_coding-intron (FBgn0035142, intron 2 of 10) -6285 FBgn0035141 FBgn0035141 FBtr0072564 Cypl protein_coding CG8478-S2-modencode_R1_peak_18 chr2L 2130444 2130537 + 76 NA promoter-TSS (FBgn0004507) protein_coding-promoter-TSS (FBgn0004507) -325 FBgn0004507 FBgn0004507 FBtr0100485 GlyP protein_coding CG8478-S2-modencode_R1_peak_700 chrX 3638701 3638912 + 76 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -25141 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_287 chr2R 18158147 18158394 + 76 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -155 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding CG8478-S2-modencode_R1_peak_200 chr2R 8878113 8878479 + 76 NA Intergenic Intergenic -3106 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding CG8478-S2-modencode_R1_peak_680 chrX 1517419 1517513 + 76 NA intron (FBgn0000210, intron 1 of 7) protein_coding-intron (FBgn0000210, intron 1 of 7) -5278 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding CG8478-S2-modencode_R1_peak_307 chr3L 616739 617042 + 76 NA promoter-TSS (FBgn0261636) protein_coding-promoter-TSS (FBgn0261636) -244 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding CG8478-S2-modencode_R1_peak_701 chrX 3643051 3643148 + 75 NA exon (FBgn0086899, exon 2 of 10) protein_coding-exon (FBgn0086899, exon 2 of 10) -23574 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_623 chr3R 24672631 24672970 + 75 NA intron (FBgn0264324, intron 2 of 13) protein_coding-intron (FBgn0264324, intron 2 of 12) 1778 FBgn0264324 FBgn0264324 FBtr0330305 spg protein_coding CG8478-S2-modencode_R1_peak_192 chr2R 8500747 8500895 + 75 NA intron (FBgn0004435, intron 1 of 8) protein_coding-intron (FBgn0004435, intron 1 of 9) 576 FBgn0004435 FBgn0004435 FBtr0087833 Galpha49B protein_coding CG8478-S2-modencode_R1_peak_605 chr3R 21930155 21930352 + 74 NA Intergenic Intergenic -5820 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_52 chr2L 8031010 8031395 + 74 NA TTS (FBgn0031977) protein_coding-TTS (FBgn0031977) 481 FBgn0044323 FBgn0044323 FBtr0079539 Cka protein_coding CG8478-S2-modencode_R1_peak_519 chr3R 9727339 9727480 + 74 NA promoter-TSS (FBgn0000576) protein_coding-promoter-TSS (FBgn0000576) -172 FBgn0000576 FBgn0000576 FBtr0082863 ems protein_coding CG8478-S2-modencode_R1_peak_448 chr3R 2160836 2161125 + 73 NA promoter-TSS (FBgn0037429) protein_coding-promoter-TSS (FBgn0037429) -106 FBgn0037429 FBgn0037429 FBtr0301493 Osi19 protein_coding CG8478-S2-modencode_R1_peak_333 chr3L 4233647 4234020 + 73 NA intron (FBgn0001257, intron 1 of 2) protein_coding-intron (FBgn0001257, intron 1 of 2) -6475 FBgn0035515 FBgn0035515 FBtr0073226 CG14997 protein_coding CG8478-S2-modencode_R1_peak_742 chrX 7604007 7604132 + 73 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) 2261 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_54 chr2L 8083488 8083960 + 73 NA promoter-TSS (FBgn0020240) protein_coding-promoter-TSS (FBgn0020240) -742 FBgn0020240 FBgn0020240 FBtr0079543 Mcr protein_coding CG8478-S2-modencode_R1_peak_394 chr3L 16371009 16371167 + 72 NA TTS (FBgn0036622) protein_coding-TTS (FBgn0036622) 662 FBgn0036621 FBgn0036621 FBtr0331173 roq protein_coding CG8478-S2-modencode_R1_peak_578 chr3R 19047133 19047394 + 72 NA intron (FBgn0262975, intron 1 of 10) protein_coding-intron (FBgn0262975, intron 1 of 10) 420 FBgn0262975 FBgn0262975 FBtr0308227 cnc protein_coding CG8478-S2-modencode_R1_peak_455 chr3R 2718932 2719270 + 71 NA Intergenic Intergenic 11303 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding CG8478-S2-modencode_R1_peak_460 chr3R 2863097 2863413 + 71 NA Intergenic Intergenic -14802 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding CG8478-S2-modencode_R1_peak_32 chr2L 5292845 5292989 + 71 NA Intergenic Intergenic -12805 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_781 chrX 10367221 10367317 + 70 NA promoter-TSS (FBgn0030206) protein_coding-promoter-TSS (FBgn0030206) 351 FBgn0261710 FBgn0261710 FBtr0307488 nocte protein_coding CG8478-S2-modencode_R1_peak_299 chr2R 21003192 21003305 + 70 NA Intergenic Intergenic -13707 FBgn0050430 FBgn0050430 FBtr0072448 CG30430 protein_coding CG8478-S2-modencode_R1_peak_482 chr3R 5253904 5254123 + 70 NA promoter-TSS (FBgn0261552) protein_coding-promoter-TSS (FBgn0261552) 10349 FBgn0261552 FBgn0261552 FBtr0302691 ps protein_coding CG8478-S2-modencode_R1_peak_185 chr2R 7520639 7520846 + 70 NA promoter-TSS (FBgn0033638) protein_coding-promoter-TSS (FBgn0033638) 7676 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding CG8478-S2-modencode_R1_peak_818 chrX 12649440 12649536 + 70 NA Intergenic Intergenic 5162 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding CG8478-S2-modencode_R1_peak_548 chr3R 13527390 13527482 + 70 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) -14653 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding CG8478-S2-modencode_R1_peak_606 chr3R 21930415 21930683 + 70 NA Intergenic Intergenic -6116 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_542 chr3R 12695133 12695348 + 69 NA intron (FBgn0263610, intron 4 of 7) ncRNA-intron (FBgn0263610, intron 3 of 6) 13203 FBgn0262462 FBgn0262462 FBtr0304522 mir-iab-4 pre_miRNA CG8478-S2-modencode_R1_peak_136 chr2R 5296800 5296997 + 69 NA promoter-TSS (FBgn0016078) protein_coding-promoter-TSS (FBgn0016078) 4067 FBgn0016078 FBgn0016078 FBtr0306111 wun protein_coding CG8478-S2-modencode_R1_peak_78 chr2L 12404449 12404784 + 69 NA promoter-TSS (FBgn0043841) protein_coding-promoter-TSS (FBgn0043841) 6342 FBgn0041195 FBgn0041195 FBtr0080365 Pkd2 protein_coding CG8478-S2-modencode_R1_peak_571 chr3R 17679571 17679887 + 69 NA intron (FBgn0015229, intron 1 of 1) protein_coding-intron (FBgn0015229, intron 1 of 1) 2255 FBgn0015229 FBgn0015229 FBtr0084157 glec protein_coding CG8478-S2-modencode_R1_peak_23 chr2L 3539506 3539869 + 69 NA promoter-TSS (FBgn0024244) protein_coding-promoter-TSS (FBgn0024244) -48 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding CG8478-S2-modencode_R1_peak_155 chr2R 6451844 6452245 + 68 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 6651 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_564 chr3R 17010574 17010743 + 68 NA intron (FBgn0264357, intron 1 of 8) protein_coding-intron (FBgn0264357, intron 6 of 12) -16731 FBgn0260004 FBgn0260004 FBtr0084027 Snmp1 protein_coding CG8478-S2-modencode_R1_peak_833 chrX 16342824 16343188 + 68 NA promoter-TSS (FBgn0054015) protein_coding-promoter-TSS (FBgn0054015) 296 FBgn0262734 FBgn0262734 FBtr0074281 Rbp2 protein_coding CG8478-S2-modencode_R1_peak_250 chr2R 14044611 14044770 + 68 NA promoter-TSS (FBgn0022238) protein_coding-promoter-TSS (FBgn0022238) -295 FBgn0022238 FBgn0022238 FBtr0300484 lolal protein_coding CG8478-S2-modencode_R1_peak_424 chr3L 20614898 20614992 + 68 NA Intergenic Intergenic -1186 FBgn0001323 FBgn0001323 FBtr0078212 knrl protein_coding CG8478-S2-modencode_R1_peak_183 chr2R 7490817 7491136 + 68 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 1465 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding CG8478-S2-modencode_R1_peak_194 chr2R 8772250 8772448 + 68 NA exon (FBgn0003975, exon 1 of 8) protein_coding-exon (FBgn0003975, exon 1 of 8) 643 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding CG8478-S2-modencode_R1_peak_668 chrUextra 17026125 17026214 + 68 NA NA NA NA NA CG8478-S2-modencode_R1_peak_851 chrX 19531297 19531652 + 68 NA intron (FBgn0087008, intron 1 of 11) protein_coding-intron (FBgn0087008, intron 1 of 11) 911 FBgn0087008 FBgn0087008 FBtr0074762 e(y)3 protein_coding CG8478-S2-modencode_R1_peak_513 chr3R 8838025 8838514 + 68 NA intron (FBgn0020496, intron 1 of 5) protein_coding-intron (FBgn0020496, intron 1 of 5) 881 FBgn0020496 FBgn0020496 FBtr0082702 CtBP protein_coding CG8478-S2-modencode_R1_peak_862 chrX 20122971 20123108 + 68 NA promoter-TSS (FBgn0031098) protein_coding-promoter-TSS (FBgn0031098) -523 FBgn0031098 FBgn0031098 FBtr0077341 CG17068 protein_coding CG8478-S2-modencode_R1_peak_374 chr3L 12426964 12427142 + 68 NA Intergenic Intergenic -1285 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding CG8478-S2-modencode_R1_peak_76 chr2L 11807738 11808001 + 68 NA intron (FBgn0020309, intron 1 of 7) protein_coding-intron (FBgn0020309, intron 1 of 7) 1103 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding CG8478-S2-modencode_R1_peak_147 chr2R 6011391 6011619 + 67 NA promoter-TSS (FBgn0050011) protein_coding-promoter-TSS (FBgn0050011) -288 FBgn0050011 FBgn0050011 FBtr0300943 gem protein_coding CG8478-S2-modencode_R1_peak_653 chrM 621 796 + 67 NA NA NA NA NA CG8478-S2-modencode_R1_peak_793 chrX 10440329 10440731 + 67 NA intron (FBgn0085443, intron 1 of 9) protein_coding-intron (FBgn0085443, intron 3 of 9) 20094 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_737 chrX 7596718 7596999 + 66 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) -4950 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_162 chr2R 6491710 6491913 + 66 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) -17897 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_22 chr2L 3534339 3534524 + 66 NA Intergenic Intergenic 3642 FBgn0031550 FBgn0031550 FBtr0077529 Che-13 protein_coding CG8478-S2-modencode_R1_peak_691 chrX 3275732 3276364 + 66 NA intron (FBgn0262656, intron 2 of 2) protein_coding-intron (FBgn0262656, intron 2 of 2) 8856 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_401 chr3L 17556947 17557098 + 66 NA intron (FBgn0000567, intron 7 of 7) protein_coding-intron (FBgn0000567, intron 7 of 7) 2240 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_53 chr2L 8031447 8031600 + 66 NA TTS (FBgn0031977) protein_coding-TTS (FBgn0031977) 802 FBgn0044323 FBgn0044323 FBtr0079539 Cka protein_coding CG8478-S2-modencode_R1_peak_205 chr2R 9224890 9225244 + 66 NA Intergenic Intergenic -8121 FBgn0262391 FBgn0262391 FBtr0304273 mir-184 pre_miRNA CG8478-S2-modencode_R1_peak_216 chr2R 10062095 10062616 + 66 NA intron (FBgn0000289, intron 1 of 11) protein_coding-intron (FBgn0000289, intron 1 of 9) 1180 FBgn0000289 FBgn0000289 FBtr0112795 cg protein_coding CG8478-S2-modencode_R1_peak_865 chrX 21102860 21103007 + 66 NA promoter-TSS (FBgn0011954) tRNA-promoter-TSS (FBgn0011954) -185 FBgn0011954 FBgn0011954 FBtr0077184 tRNA:R:19F tRNA CG8478-S2-modencode_R1_peak_599 chr3R 21344364 21344526 + 65 NA intron (FBgn0011666, intron 1 of 6) protein_coding-intron (FBgn0011666, intron 1 of 6) 12448 FBgn0039343 FBgn0039343 FBtr0084880 CG5111 protein_coding CG8478-S2-modencode_R1_peak_403 chr3L 17570802 17571478 + 65 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -11878 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_348 chr3L 8049489 8049800 + 65 NA promoter-TSS (FBgn0026263) protein_coding-promoter-TSS (FBgn0026263) -169 FBgn0026263 FBgn0026263 FBtr0302329 bip1 protein_coding CG8478-S2-modencode_R1_peak_819 chrX 12650382 12650719 + 65 NA TTS (FBgn0020513) protein_coding-TTS (FBgn0020513) 4100 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding CG8478-S2-modencode_R1_peak_119 chr2R 3376418 3376881 + 64 NA promoter-TSS (FBgn0259745) protein_coding-promoter-TSS (FBgn0259745) -458 FBgn0259745 FBgn0259745 FBtr0300081 wech protein_coding CG8478-S2-modencode_R1_peak_834 chrX 16352600 16352942 + 64 NA TTS (FBgn0264255) protein_coding-TTS (FBgn0264255) 10061 FBgn0262734 FBgn0262734 FBtr0074281 Rbp2 protein_coding CG8478-S2-modencode_R1_peak_103 chr2L 21629139 21629608 + 64 NA intron (FBgn0022893, intron 1 of 2) protein_coding-intron (FBgn0022893, intron 1 of 2) 559 FBgn0022893 FBgn0022893 FBtr0085920 Df31 protein_coding CG8478-S2-modencode_R1_peak_173 chr2R 6985481 6986210 + 64 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) 8476 FBgn0040765 FBgn0040765 FBtr0088210 luna protein_coding CG8478-S2-modencode_R1_peak_632 chr3R 26133785 26133936 + 64 NA intron (FBgn0010113, intron 1 of 5) protein_coding-intron (FBgn0010113, intron 1 of 5) -1501 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_106 chr2L 22168556 22169133 + 63 NA intron (FBgn0032979, intron 1 of 6) protein_coding-intron (FBgn0032979, intron 1 of 6) 299 FBgn0032979 FBgn0032979 FBtr0085964 CG1832 protein_coding CG8478-S2-modencode_R1_peak_112 chr2R 1669947 1670360 + 63 NA exon (FBgn0025693, exon 1 of 10) protein_coding-exon (FBgn0025693, exon 1 of 10) 207 FBgn0025693 FBgn0025693 FBtr0086056 CG11163 protein_coding CG8478-S2-modencode_R1_peak_353 chr3L 9012459 9012659 + 63 NA promoter-TSS (FBgn0035956) protein_coding-promoter-TSS (FBgn0035956) -213 FBgn0035956 FBgn0035956 FBtr0076547 Doc2 protein_coding CG8478-S2-modencode_R1_peak_712 chrX 3680214 3680333 + 63 NA exon (FBgn0086899, exon 8 of 8) protein_coding-exon (FBgn0086899, exon 8 of 8) -3802 FBgn0029676 FBgn0029676 FBtr0333764 HIP-R protein_coding CG8478-S2-modencode_R1_peak_120 chr2R 3418400 3418663 + 63 NA intron (FBgn0033188, intron 1 of 2) protein_coding-intron (FBgn0033188, intron 1 of 2) -1765 FBgn0033188 FBgn0033188 FBtr0088958 CG1600 protein_coding CG8478-S2-modencode_R1_peak_779 chrX 10357328 10357644 + 63 NA TTS (FBgn0261710) protein_coding-TTS (FBgn0261710) 2717 FBgn0083167 FBgn0083167 FBtr0071449 Neb-cGP protein_coding CG8478-S2-modencode_R1_peak_666 chrUextra 8511089 8511177 + 63 NA NA NA NA NA CG8478-S2-modencode_R1_peak_838 chrX 16971263 16971581 + 62 NA exon (FBgn0030812, exon 2 of 15) protein_coding-exon (FBgn0030812, exon 2 of 15) 508 FBgn0030812 FBgn0030812 FBtr0310525 CG8949 protein_coding CG8478-S2-modencode_R1_peak_235 chr2R 12915702 12915995 + 62 NA intron (FBgn0023172, intron 1 of 23) protein_coding-intron (FBgn0023172, intron 1 of 22) 1102 FBgn0023172 FBgn0023172 FBtr0305083 RhoGEF2 protein_coding CG8478-S2-modencode_R1_peak_797 chrX 10709660 10709935 + 62 NA promoter-TSS (FBgn0262735) protein_coding-promoter-TSS (FBgn0262735) -1671 FBgn0262735 FBgn0262735 FBtr0073419 Imp protein_coding CG8478-S2-modencode_R1_peak_222 chr2R 11236904 11237531 + 62 NA promoter-TSS (FBgn0034013) protein_coding-promoter-TSS (FBgn0034013) -442 FBgn0034013 FBgn0034013 FBtr0087382 unc-5 protein_coding CG8478-S2-modencode_R1_peak_728 chrX 6753738 6753994 + 62 NA Intergenic Intergenic -7195 FBgn0029915 FBgn0029915 FBtr0071040 CG14434 protein_coding CG8478-S2-modencode_R1_peak_795 chrX 10496506 10496625 + 62 NA promoter-TSS (FBgn0030218) protein_coding-promoter-TSS (FBgn0030218) -886 FBgn0030218 FBgn0030218 FBtr0071510 CG1628 protein_coding CG8478-S2-modencode_R1_peak_206 chr2R 9813092 9813378 + 62 NA promoter-TSS (FBgn0013733) protein_coding-promoter-TSS (FBgn0013733) -14784 FBgn0013733 FBgn0013733 FBtr0304853 shot protein_coding CG8478-S2-modencode_R1_peak_662 chrU 7544539 7545070 + 62 NA NA NA NA NA CG8478-S2-modencode_R1_peak_603 chr3R 21867961 21868563 + 61 NA promoter-TSS (FBgn0001139) protein_coding-promoter-TSS (FBgn0001139) 830 FBgn0001139 FBgn0001139 FBtr0084965 gro protein_coding CG8478-S2-modencode_R1_peak_167 chr2R 6959555 6959767 + 61 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -13430 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_473 chr3R 4637509 4637621 + 61 NA intron (FBgn0037635, intron 1 of 1) protein_coding-intron (FBgn0037635, intron 1 of 1) -2032 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding CG8478-S2-modencode_R1_peak_640 chr3R 26631710 26631856 + 61 NA intron (FBgn0011739, intron 1 of 7) protein_coding-intron (FBgn0011739, intron 1 of 7) 558 FBgn0011739 FBgn0011739 FBtr0085720 wts protein_coding CG8478-S2-modencode_R1_peak_279 chr2R 17368265 17368461 + 61 NA intron (FBgn0010415, intron 1 of 6) protein_coding-intron (FBgn0010415, intron 1 of 5) -1071 FBgn0026369 FBgn0026369 FBtr0071642 Sara protein_coding CG8478-S2-modencode_R1_peak_556 chr3R 14749443 14749786 + 61 NA promoter-TSS (FBgn0261113) protein_coding-promoter-TSS (FBgn0261113) 4782 FBgn0038662 FBgn0038662 FBtr0083723 CG14290 protein_coding CG8478-S2-modencode_R1_peak_411 chr3L 18056254 18056500 + 60 NA intron (FBgn0000568, intron 1 of 7) protein_coding-intron (FBgn0000568, intron 1 of 7) 1419 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding CG8478-S2-modencode_R1_peak_643 chr3R 26886303 26886818 + 60 NA promoter-TSS (FBgn0002413) protein_coding-promoter-TSS (FBgn0002413) 43 FBgn0002413 FBgn0002413 FBtr0085744 dco protein_coding CG8478-S2-modencode_R1_peak_772 chrX 10105713 10105879 + 60 NA intron (FBgn0030183, intron 1 of 1) protein_coding-intron (FBgn0030183, intron 1 of 2) -1207 FBgn0028342 FBgn0028342 FBtr0071438 l(1)G0230 protein_coding CG8478-S2-modencode_R1_peak_660 chrU 5288473 5288585 + 60 NA NA NA NA NA CG8478-S2-modencode_R1_peak_447 chr3R 2160518 2160750 + 60 NA promoter-TSS (FBgn0037429) protein_coding-promoter-TSS (FBgn0037429) -452 FBgn0037429 FBgn0037429 FBtr0301493 Osi19 protein_coding CG8478-S2-modencode_R1_peak_368 chr3L 11113030 11113352 + 60 NA promoter-TSS (FBgn0036135) protein_coding-promoter-TSS (FBgn0036135) 684 FBgn0036134 FBgn0036134 FBtr0300785 fd68A protein_coding CG8478-S2-modencode_R1_peak_379 chr3L 12646334 12646511 + 59 NA promoter-TSS (FBgn0263379) ncRNA-promoter-TSS (FBgn0263379) -232 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA CG8478-S2-modencode_R1_peak_133 chr2R 5171728 5172000 + 59 NA TTS (FBgn0033400) protein_coding-TTS (FBgn0033400) 738 FBgn0020621 FBgn0020621 FBtr0302603 Pkn protein_coding CG8478-S2-modencode_R1_peak_325 chr3L 2867694 2867910 + 59 NA intron (FBgn0263392, intron 3 of 10) protein_coding-intron (FBgn0263392, intron 3 of 9) 11356 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding CG8478-S2-modencode_R1_peak_358 chr3L 10657910 10658063 + 59 NA TTS (FBgn0052068) protein_coding-TTS (FBgn0052068) 147 FBgn0010762 FBgn0010762 FBtr0331573 simj protein_coding CG8478-S2-modencode_R1_peak_134 chr2R 5172086 5172307 + 58 NA TTS (FBgn0033400) protein_coding-TTS (FBgn0033400) 406 FBgn0020621 FBgn0020621 FBtr0302603 Pkn protein_coding CG8478-S2-modencode_R1_peak_552 chr3R 14300013 14300300 + 58 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) -62803 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_702 chrX 3666416 3666669 + 58 NA promoter-TSS (FBgn0086899) protein_coding-promoter-TSS (FBgn0086899) -131 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_65 chr2L 9698521 9698761 + 58 NA intron (FBgn0000273, intron 1 of 2) protein_coding-intron (FBgn0000273, intron 1 of 2) 652 FBgn0000273 FBgn0000273 FBtr0079852 Pka-C1 protein_coding CG8478-S2-modencode_R1_peak_148 chr2R 6190357 6190553 + 58 NA promoter-TSS (FBgn0033504) protein_coding-promoter-TSS (FBgn0033504) 6821 FBgn0028426 FBgn0028426 FBtr0088360 JhI-1 protein_coding CG8478-S2-modencode_R1_peak_478 chr3R 5061536 5062297 + 57 NA intron (FBgn0003165, intron 1 of 12) protein_coding-intron (FBgn0003165, intron 1 of 12) 4073 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_493 chr3R 5919137 5919491 + 57 NA promoter-TSS (FBgn0263413) ncRNA-promoter-TSS (FBgn0263413) -170 FBgn0263413 FBgn0263413 FBtr0309196 CR43459 ncRNA CG8478-S2-modencode_R1_peak_207 chr2R 9841114 9841733 + 57 NA promoter-TSS (FBgn0050481) protein_coding-promoter-TSS (FBgn0050481) -277 FBgn0050481 FBgn0050481 FBtr0100285 mRpL53 protein_coding CG8478-S2-modencode_R1_peak_257 chr2R 14576209 14576788 + 57 NA TTS (FBgn0262102) protein_coding-TTS (FBgn0262102) 861 FBgn0262103 FBgn0262103 FBtr0304024 Sik3 protein_coding CG8478-S2-modencode_R1_peak_280 chr2R 17522197 17522489 + 57 NA promoter-TSS (FBgn0260720) ncRNA-promoter-TSS (FBgn0260720) 170 FBgn0034643 FBgn0034643 FBtr0330228 CG10321 protein_coding CG8478-S2-modencode_R1_peak_537 chr3R 12257380 12257646 + 57 NA promoter-TSS (FBgn0051282) tRNA-promoter-TSS (FBgn0051282) -149 FBgn0051282 FBgn0051282 FBtr0083285 tRNA:CR31282 tRNA CG8478-S2-modencode_R1_peak_555 chr3R 14749072 14749270 + 57 NA promoter-TSS (FBgn0261113) protein_coding-promoter-TSS (FBgn0261113) 4960 FBgn0261113 FBgn0261113 FBtr0083703 Xrp1 protein_coding CG8478-S2-modencode_R1_peak_397 chr3L 17003261 17003528 + 57 NA intron (FBgn0036684, intron 1 of 6) protein_coding-intron (FBgn0036684, intron 1 of 6) 5757 FBgn0036685 FBgn0036685 FBtr0332121 CG6664 protein_coding CG8478-S2-modencode_R1_peak_831 chrX 16043126 16043324 + 56 NA promoter-TSS (FBgn0042650) protein_coding-promoter-TSS (FBgn0042650) -24860 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding CG8478-S2-modencode_R1_peak_71 chr2L 11516545 11516802 + 56 NA promoter-TSS (FBgn0032364) protein_coding-promoter-TSS (FBgn0032364) 362 FBgn0032363 FBgn0032363 FBtr0080247 CG6509 protein_coding CG8478-S2-modencode_R1_peak_366 chr3L 10891743 10891911 + 56 NA exon (FBgn0036111, exon 1 of 4) protein_coding-exon (FBgn0036111, exon 1 of 4) 396 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding CG8478-S2-modencode_R1_peak_864 chrX 21102635 21102737 + 56 NA promoter-TSS (FBgn0011954) tRNA-promoter-TSS (FBgn0011954) -260 FBgn0052518 FBgn0052518 FBtr0077238 tRNA:CR32518:Psi pseudogene CG8478-S2-modencode_R1_peak_252 chr2R 14293042 14293173 + 56 NA promoter-TSS (FBgn0063494) protein_coding-promoter-TSS (FBgn0063494) -411 FBgn0063494 FBgn0063494 FBtr0086674 GstE6 protein_coding CG8478-S2-modencode_R1_peak_343 chr3L 7797937 7798047 + 56 NA promoter-TSS (FBgn0052369) protein_coding-promoter-TSS (FBgn0052369) 4933 FBgn0052369 FBgn0052369 FBtr0076783 CG32369 protein_coding CG8478-S2-modencode_R1_peak_565 chr3R 17202048 17202218 + 56 NA intron (FBgn0002781, intron 3 of 4) protein_coding-intron (FBgn0002781, intron 3 of 4) 988 FBgn0002781 FBgn0002781 FBtr0084073 mod(mdg4) protein_coding CG8478-S2-modencode_R1_peak_682 chrX 2034588 2034867 + 56 NA promoter-TSS (FBgn0023507) protein_coding-promoter-TSS (FBgn0023507) -1993 FBgn0023507 FBgn0023507 FBtr0070383 CG3835 protein_coding CG8478-S2-modencode_R1_peak_688 chrX 3272345 3272561 + 56 NA intron (FBgn0262656, intron 2 of 2) protein_coding-intron (FBgn0262656, intron 2 of 2) 5261 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_305 chr3L 548769 548861 + 56 NA intron (FBgn0035142, intron 2 of 10) protein_coding-intron (FBgn0035142, intron 2 of 10) -5884 FBgn0035141 FBgn0035141 FBtr0072564 Cypl protein_coding CG8478-S2-modencode_R1_peak_372 chr3L 12117355 12117572 + 56 NA intron (FBgn0022959, intron 1 of 2) protein_coding-intron (FBgn0022959, intron 1 of 3) 787 FBgn0022959 FBgn0022959 FBtr0076027 yps protein_coding CG8478-S2-modencode_R1_peak_420 chr3L 18807125 18807330 + 56 NA intron (FBgn0036814, intron 2 of 5) protein_coding-intron (FBgn0036814, intron 2 of 5) 6548 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_475 chr3R 5051810 5051898 + 56 NA intron (FBgn0003165, intron 3 of 12) protein_coding-intron (FBgn0003165, intron 3 of 12) 14135 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_511 chr3R 8549621 8549729 + 56 NA Intergenic Intergenic -4161 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_547 chr3R 13526950 13527047 + 56 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) -14215 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding CG8478-S2-modencode_R1_peak_798 chrX 11048690 11049037 + 56 NA promoter-TSS (FBgn0261277) protein_coding-promoter-TSS (FBgn0261277) -1028 FBgn0261277 FBgn0261277 FBtr0331743 rtv protein_coding CG8478-S2-modencode_R1_peak_360 chr3L 10733163 10733533 + 56 NA Intergenic Intergenic -31744 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding CG8478-S2-modencode_R1_peak_754 chrX 9237842 9238028 + 56 NA intron (FBgn0085478, intron 2 of 10) protein_coding-intron (FBgn0085478, intron 2 of 10) 12325 FBgn0085478 FBgn0085478 FBtr0112755 CG34449 protein_coding CG8478-S2-modencode_R1_peak_718 chrX 4580253 4580428 + 56 NA exon (FBgn0022768, exon 1 of 3) protein_coding-exon (FBgn0022768, exon 1 of 3) 564 FBgn0022768 FBgn0022768 FBtr0070685 Pp2C1 protein_coding CG8478-S2-modencode_R1_peak_477 chr3R 5060540 5060686 + 56 NA intron (FBgn0003165, intron 1 of 12) protein_coding-intron (FBgn0003165, intron 1 of 12) 5376 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_821 chrX 13633517 13633814 + 56 NA promoter-TSS (FBgn0030519) protein_coding-promoter-TSS (FBgn0030519) -150 FBgn0030519 FBgn0030519 FBtr0331719 CG11151 protein_coding CG8478-S2-modencode_R1_peak_39 chr2L 5421741 5421829 + 56 NA Intergenic Intergenic -10057 FBgn0263866 FBgn0263866 FBtr0329835 CR43713 ncRNA CG8478-S2-modencode_R1_peak_462 chr3R 3349641 3349749 + 56 NA promoter-TSS (FBgn0015575) protein_coding-promoter-TSS (FBgn0015575) -219 FBgn0015575 FBgn0015575 FBtr0081550 alpha-Est7 protein_coding CG8478-S2-modencode_R1_peak_835 chrX 16480476 16480690 + 56 NA exon (FBgn0030758, exon 1 of 2) protein_coding-exon (FBgn0030758, exon 1 of 2) -1323 FBgn0030759 FBgn0030759 FBtr0074282 CG13014 protein_coding CG8478-S2-modencode_R1_peak_498 chr3R 6361462 6361814 + 56 NA intron (FBgn0001235, intron 7 of 12) protein_coding-intron (FBgn0001235, intron 6 of 11) -22860 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA CG8478-S2-modencode_R1_peak_240 chr2R 13422797 13423031 + 55 NA promoter-TSS (FBgn0034237) protein_coding-promoter-TSS (FBgn0034237) 457 FBgn0263197 FBgn0263197 FBtr0086948 Patronin protein_coding CG8478-S2-modencode_R1_peak_247 chr2R 13949457 13949709 + 55 NA promoter-TSS (FBgn0085415) protein_coding-promoter-TSS (FBgn0085415) -626 FBgn0085415 FBgn0085415 FBtr0112627 CG34386 protein_coding CG8478-S2-modencode_R1_peak_597 chr3R 21341130 21341330 + 55 NA promoter-TSS (FBgn0011666) protein_coding-promoter-TSS (FBgn0011666) 9233 FBgn0039343 FBgn0039343 FBtr0084880 CG5111 protein_coding CG8478-S2-modencode_R1_peak_629 chr3R 25597643 25597745 + 55 NA promoter-TSS (FBgn0001297) protein_coding-promoter-TSS (FBgn0001297) 8759 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding CG8478-S2-modencode_R1_peak_230 chr2R 12482058 12482210 + 55 NA promoter-TSS (FBgn0034142) protein_coding-promoter-TSS (FBgn0034142) 84 FBgn0034142 FBgn0034142 FBtr0087120 CG8306 protein_coding CG8478-S2-modencode_R1_peak_204 chr2R 8930876 8930964 + 55 NA Intergenic Intergenic 3873 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding CG8478-S2-modencode_R1_peak_327 chr3L 3246269 3246807 + 55 NA Intergenic Intergenic -1477 FBgn0263246 FBgn0263246 FBtr0308062 CG43389 protein_coding CG8478-S2-modencode_R1_peak_214 chr2R 10022156 10022481 + 55 NA intron (FBgn0040752, intron 1 of 11) protein_coding-intron (FBgn0040752, intron 1 of 11) 6085 FBgn0040752 FBgn0040752 FBtr0087601 Prosap protein_coding CG8478-S2-modencode_R1_peak_13 chr2L 1669168 1669352 + 55 NA intron (FBgn0086758, intron 1 of 5) protein_coding-intron (FBgn0086758, intron 2 of 6) 18002 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_639 chr3R 26631465 26631657 + 54 NA intron (FBgn0011739, intron 1 of 7) protein_coding-intron (FBgn0011739, intron 1 of 7) 780 FBgn0011739 FBgn0011739 FBtr0085720 wts protein_coding CG8478-S2-modencode_R1_peak_466 chr3R 4159607 4159956 + 54 NA promoter-TSS (FBgn0003129) protein_coding-promoter-TSS (FBgn0003129) -267 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding CG8478-S2-modencode_R1_peak_143 chr2R 5933069 5933208 + 54 NA intron (FBgn0033476, intron 1 of 6) protein_coding-intron (FBgn0033476, intron 1 of 6) -2143 FBgn0085249 FBgn0085249 FBtr0112413 CG34220 protein_coding CG8478-S2-modencode_R1_peak_108 chr2L 22364677 22364765 + 54 NA intron (FBgn0039972, intron 3 of 7) protein_coding-intron (FBgn0039972, intron 2 of 6) 10366 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding CG8478-S2-modencode_R1_peak_486 chr3R 5757582 5757704 + 54 NA intron (FBgn0263097, intron 2 of 6) protein_coding-intron (FBgn0263097, intron 2 of 6) 54139 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding CG8478-S2-modencode_R1_peak_72 chr2L 11806363 11806525 + 54 NA intron (FBgn0020309, intron 1 of 7) protein_coding-intron (FBgn0020309, intron 1 of 7) 2528 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding CG8478-S2-modencode_R1_peak_674 chrX 1293173 1293350 + 54 NA Intergenic Intergenic 6174 FBgn0024985 FBgn0024985 FBtr0332292 CG11448 protein_coding CG8478-S2-modencode_R1_peak_559 chr3R 16079588 16079884 + 54 NA intron (FBgn0262582, intron 2 of 18) protein_coding-intron (FBgn0262582, intron 2 of 18) -39251 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding CG8478-S2-modencode_R1_peak_309 chr3L 627352 627600 + 54 NA promoter-TSS (FBgn0263039) ncRNA-promoter-TSS (FBgn0263039) -994 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_574 chr3R 17722120 17722208 + 54 NA intron (FBgn0038917, intron 4 of 4) protein_coding-intron (FBgn0038917, intron 4 of 4) 6903 FBgn0264426 FBgn0264426 FBtr0332545 CR43844 ncRNA CG8478-S2-modencode_R1_peak_439 chr3R 629140 629377 + 54 NA intron (FBgn0260794, intron 1 of 10) protein_coding-intron (FBgn0260794, intron 1 of 11) 8525 FBgn0026417 FBgn0026417 FBtr0078876 Hus1-like protein_coding CG8478-S2-modencode_R1_peak_298 chr2R 20431063 20431250 + 53 NA promoter-TSS (FBgn0035023) protein_coding-promoter-TSS (FBgn0035023) -61 FBgn0035023 FBgn0035023 FBtr0300187 itp protein_coding CG8478-S2-modencode_R1_peak_346 chr3L 7860435 7860573 + 53 NA promoter-TSS (FBgn0016694) protein_coding-promoter-TSS (FBgn0016694) -35 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding CG8478-S2-modencode_R1_peak_855 chrX 19760951 19761147 + 53 NA exon (FBgn0052529, exon 2 of 9) protein_coding-exon (FBgn0052529, exon 2 of 9) 870 FBgn0052529 FBgn0052529 FBtr0306523 Hers protein_coding CG8478-S2-modencode_R1_peak_146 chr2R 5989287 5989413 + 53 NA intron (FBgn0004907, intron 1 of 6) protein_coding-intron (FBgn0004907, intron 1 of 6) -2259 FBgn0033485 FBgn0033485 FBtr0088425 RpLP0-like protein_coding CG8478-S2-modencode_R1_peak_612 chr3R 22360775 22360872 + 53 NA exon (FBgn0039431, exon 1 of 11) protein_coding-exon (FBgn0039431, exon 1 of 11) 116 FBgn0039431 FBgn0039431 FBtr0302210 CG6490 protein_coding CG8478-S2-modencode_R1_peak_93 chr2L 18151440 18151542 + 53 NA intron (FBgn0041184, intron 1 of 3) protein_coding-intron (FBgn0041184, intron 1 of 3) 919 FBgn0041184 FBgn0041184 FBtr0329929 Socs36E protein_coding CG8478-S2-modencode_R1_peak_43 chr2L 6833736 6833918 + 53 NA intron (FBgn0051632, intron 4 of 4) protein_coding-intron (FBgn0051632, intron 4 of 4) 11510 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding CG8478-S2-modencode_R1_peak_524 chr3R 10564884 10565206 + 53 NA intron (FBgn0011217, intron 1 of 4) protein_coding-intron (FBgn0011217, intron 2 of 5) 1441 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding CG8478-S2-modencode_R1_peak_570 chr3R 17477400 17477594 + 53 NA intron (FBgn0011766, intron 1 of 7) protein_coding-intron (FBgn0011766, intron 1 of 7) 11183 FBgn0038893 FBgn0038893 FBtr0084116 CG6353 protein_coding CG8478-S2-modencode_R1_peak_811 chrX 12633258 12633374 + 53 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 3161 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding CG8478-S2-modencode_R1_peak_87 chr2L 15339585 15339802 + 53 NA Intergenic Intergenic 5829 FBgn0001981 FBgn0001981 FBtr0080734 esg protein_coding CG8478-S2-modencode_R1_peak_233 chr2R 12743949 12744121 + 53 NA promoter-TSS (FBgn0026533) protein_coding-promoter-TSS (FBgn0026533) 309 FBgn0026533 FBgn0026533 FBtr0100437 Dek protein_coding CG8478-S2-modencode_R1_peak_328 chr3L 3249353 3249517 + 53 NA promoter-TSS (FBgn0263617) ncRNA-promoter-TSS (FBgn0263617) 62 FBgn0263617 FBgn0263617 FBtr0309982 CR43626 ncRNA CG8478-S2-modencode_R1_peak_19 chr2L 2363868 2363960 + 52 NA promoter-TSS (FBgn0014010) protein_coding-promoter-TSS (FBgn0014010) -1680 FBgn0261647 FBgn0261647 FBtr0330666 Axud1 protein_coding CG8478-S2-modencode_R1_peak_63 chr2L 9387213 9387352 + 52 NA promoter-TSS (FBgn0012036) protein_coding-promoter-TSS (FBgn0012036) -277 FBgn0012036 FBgn0012036 FBtr0332597 Aldh protein_coding CG8478-S2-modencode_R1_peak_339 chr3L 6897091 6897577 + 52 NA Intergenic Intergenic 9730 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding CG8478-S2-modencode_R1_peak_351 chr3L 8151913 8152143 + 52 NA promoter-TSS (FBgn0259916) protein_coding-promoter-TSS (FBgn0259916) -28 FBgn0259916 FBgn0259916 FBtr0332760 CG42445 protein_coding CG8478-S2-modencode_R1_peak_20 chr2L 2364162 2364620 + 52 NA promoter-TSS (FBgn0261647) protein_coding-promoter-TSS (FBgn0261647) -1203 FBgn0261647 FBgn0261647 FBtr0330666 Axud1 protein_coding CG8478-S2-modencode_R1_peak_291 chr2R 18573483 18573574 + 52 NA exon (FBgn0020257, exon 1 of 1) protein_coding-exon (FBgn0020257, exon 1 of 1) 2950 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding CG8478-S2-modencode_R1_peak_594 chr3R 20412262 20412628 + 52 NA intron (FBgn0263490, intron 1 of 4) protein_coding-intron (FBgn0263490, intron 1 of 5) 1070 FBgn0263490 FBgn0263490 FBtr0304914 mld protein_coding CG8478-S2-modencode_R1_peak_177 chr2R 7176671 7177081 + 52 NA TTS (FBgn0033610) protein_coding-TTS (FBgn0033610) 377 FBgn0033609 FBgn0033609 FBtr0088178 fbl6 protein_coding CG8478-S2-modencode_R1_peak_429 chr3L 21872512 21872631 + 52 NA promoter-TSS (FBgn0262737) protein_coding-promoter-TSS (FBgn0262737) 7568 FBgn0264470 FBgn0264470 FBtr0332737 CR43878 ncRNA CG8478-S2-modencode_R1_peak_331 chr3L 3765980 3766131 + 51 NA promoter-TSS (FBgn0052264) protein_coding-promoter-TSS (FBgn0052264) -10854 FBgn0035458 FBgn0035458 FBtr0303094 CG10858 protein_coding CG8478-S2-modencode_R1_peak_491 chr3R 5914939 5915109 + 51 NA Intergenic Intergenic -1879 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_434 chr3L 23689294 23689533 + 51 NA Intergenic Intergenic -18978 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding CG8478-S2-modencode_R1_peak_419 chr3L 18794532 18794623 + 51 NA promoter-TSS (FBgn0001078) protein_coding-promoter-TSS (FBgn0001078) 19198 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_469 chr3R 4495084 4495275 + 51 NA promoter-TSS (FBgn0037607) protein_coding-promoter-TSS (FBgn0037607) -283 FBgn0012024 FBgn0012024 FBtr0081884 tRNA:Y1:85Aa tRNA CG8478-S2-modencode_R1_peak_132 chr2R 4926993 4927209 + 51 NA TTS (FBgn0033366) protein_coding-TTS (FBgn0033366) 2546 FBgn0033366 FBgn0033366 FBtr0088664 Ance-4 protein_coding CG8478-S2-modencode_R1_peak_769 chrX 9587181 9587284 + 51 NA promoter-TSS (FBgn0000233) protein_coding-promoter-TSS (FBgn0000233) -989 FBgn0000233 FBgn0000233 FBtr0071379 btd protein_coding CG8478-S2-modencode_R1_peak_613 chr3R 22362530 22362701 + 51 NA intron (FBgn0263289, intron 1 of 26) protein_coding-intron (FBgn0263289, intron 1 of 22) 543 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding CG8478-S2-modencode_R1_peak_412 chr3L 18081307 18081395 + 51 NA promoter-TSS (FBgn0085282) protein_coding-promoter-TSS (FBgn0085282) -931 FBgn0085282 FBgn0085282 FBtr0112447 CG34253 protein_coding CG8478-S2-modencode_R1_peak_558 chr3R 16078786 16078894 + 51 NA intron (FBgn0262582, intron 1 of 18) protein_coding-intron (FBgn0262582, intron 1 of 18) -40147 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding CG8478-S2-modencode_R1_peak_645 chr3R 27551364 27551580 + 51 NA promoter-TSS (FBgn0003870) protein_coding-promoter-TSS (FBgn0003870) -652 FBgn0003870 FBgn0003870 FBtr0303228 ttk protein_coding CG8478-S2-modencode_R1_peak_468 chr3R 4485190 4485452 + 51 NA intron (FBgn0263231, intron 1 of 3) protein_coding-intron (FBgn0263231, intron 1 of 3) 1162 FBgn0263231 FBgn0263231 FBtr0081888 bel protein_coding CG8478-S2-modencode_R1_peak_442 chr3R 1089679 1089945 + 51 NA promoter-TSS (FBgn0264652) protein_coding-promoter-TSS (FBgn0264652) -854 FBgn0264652 FBgn0264652 FBtr0078782 Hph protein_coding CG8478-S2-modencode_R1_peak_153 chr2R 6430887 6431123 + 51 NA promoter-TSS (FBgn0005630) protein_coding-promoter-TSS (FBgn0005630) -6230 FBgn0263483 FBgn0263483 FBtr0309782 snoRNA:lola-d snoRNA CG8478-S2-modencode_R1_peak_792 chrX 10430553 10430663 + 51 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 30016 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_791 chrX 10429900 10430157 + 51 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 30596 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_28 chr2L 4811688 4811936 + 51 NA Intergenic Intergenic -1197 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding CG8478-S2-modencode_R1_peak_755 chrX 9238192 9238291 + 50 NA intron (FBgn0085478, intron 2 of 10) protein_coding-intron (FBgn0085478, intron 2 of 10) 12019 FBgn0085478 FBgn0085478 FBtr0112755 CG34449 protein_coding CG8478-S2-modencode_R1_peak_837 chrX 16970877 16971112 + 50 NA exon (FBgn0030812, exon 2 of 15) protein_coding-exon (FBgn0030812, exon 2 of 15) 936 FBgn0030812 FBgn0030812 FBtr0310525 CG8949 protein_coding CG8478-S2-modencode_R1_peak_750 chrX 8651941 8652043 + 50 NA exon (FBgn0026411, exon 7 of 7) protein_coding-exon (FBgn0026411, exon 7 of 7) 27394 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding CG8478-S2-modencode_R1_peak_810 chrX 12631267 12631739 + 50 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 4974 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding CG8478-S2-modencode_R1_peak_359 chr3L 10731337 10731508 + 50 NA Intergenic Intergenic -33670 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding CG8478-S2-modencode_R1_peak_158 chr2R 6454361 6454619 + 50 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 9097 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_730 chrX 7498535 7498749 + 50 NA Intergenic Intergenic -4539 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding CG8478-S2-modencode_R1_peak_598 chr3R 21344077 21344270 + 50 NA exon (FBgn0011666, exon 1 of 7) protein_coding-exon (FBgn0011666, exon 1 of 7) 12176 FBgn0039343 FBgn0039343 FBtr0084880 CG5111 protein_coding CG8478-S2-modencode_R1_peak_753 chrX 9058012 9058180 + 50 NA promoter-TSS (FBgn0026206) protein_coding-promoter-TSS (FBgn0026206) -100 FBgn0026206 FBgn0026206 FBtr0333475 mei-P26 protein_coding CG8478-S2-modencode_R1_peak_438 chr3R 13039 13239 + 50 NA TTS (FBgn0037213) protein_coding-TTS (FBgn0037213) 454 FBgn0053294 FBgn0053294 FBtr0308945 CR33294 pseudogene CG8478-S2-modencode_R1_peak_248 chr2R 14013473 14013561 + 50 NA promoter-TSS (FBgn0028983) protein_coding-promoter-TSS (FBgn0028983) -180 FBgn0003520 FBgn0003520 FBtr0301614 stau protein_coding CG8478-S2-modencode_R1_peak_268 chr2R 15519353 15519573 + 49 NA promoter-TSS (FBgn0003435) protein_coding-promoter-TSS (FBgn0003435) -3321 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding CG8478-S2-modencode_R1_peak_494 chr3R 5923954 5924045 + 49 NA exon (FBgn0263413, exon 1 of 1) ncRNA-exon (FBgn0263413, exon 1 of 1) -1803 FBgn0262419 FBgn0262419 FBtr0304362 mir-277 pre_miRNA CG8478-S2-modencode_R1_peak_94 chr2L 18936038 18936435 + 49 NA intron (FBgn0032723, intron 6 of 10) protein_coding-intron (FBgn0032723, intron 6 of 10) 7712 FBgn0032723 FBgn0032723 FBtr0081193 ssp3 protein_coding CG8478-S2-modencode_R1_peak_568 chr3R 17415476 17415699 + 49 NA intron (FBgn0013984, intron 2 of 12) protein_coding-intron (FBgn0013984, intron 2 of 12) 326 FBgn0013984 FBgn0013984 FBtr0290232 InR protein_coding CG8478-S2-modencode_R1_peak_436 chr3LHet 207121 207259 + 49 NA NA NA NA NA CG8478-S2-modencode_R1_peak_464 chr3R 4007181 4007658 + 49 NA promoter-TSS (FBgn0001138) protein_coding-promoter-TSS (FBgn0001138) -255 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding CG8478-S2-modencode_R1_peak_95 chr2L 19141704 19141792 + 49 NA intron (FBgn0010300, intron 1 of 4) protein_coding-intron (FBgn0010300, intron 1 of 3) -6515 FBgn0086447 FBgn0086447 FBtr0081161 l(2)37Cg protein_coding CG8478-S2-modencode_R1_peak_238 chr2R 13331824 13332003 + 49 NA TTS (FBgn0034219) protein_coding-TTS (FBgn0034219) 530 FBgn0027506 FBgn0027506 FBtr0086959 EDTP protein_coding CG8478-S2-modencode_R1_peak_137 chr2R 5465098 5465200 + 49 NA intron (FBgn0033426, intron 1 of 6) protein_coding-intron (FBgn0033426, intron 1 of 6) 1363 FBgn0085436 FBgn0085436 FBtr0302122 Not1 protein_coding CG8478-S2-modencode_R1_peak_261 chr2R 14689997 14690318 + 49 NA promoter-TSS (FBgn0010651) protein_coding-promoter-TSS (FBgn0010651) -253 FBgn0010651 FBgn0010651 FBtr0086635 l(2)08717 protein_coding CG8478-S2-modencode_R1_peak_627 chr3R 25517000 25517151 + 49 NA Intergenic Intergenic -1238 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding CG8478-S2-modencode_R1_peak_41 chr2L 6324065 6324454 + 48 NA intron (FBgn0021873, intron 1 of 6) protein_coding-intron (FBgn0021873, intron 1 of 7) 492 FBgn0021873 FBgn0021873 FBtr0300039 Gef26 protein_coding CG8478-S2-modencode_R1_peak_794 chrX 10440945 10441088 + 48 NA promoter-TSS (FBgn0085443) protein_coding-promoter-TSS (FBgn0085443) 19608 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_117 chr2R 2553566 2553777 + 48 NA intron (FBgn0000054, intron 1 of 2) protein_coding-intron (FBgn0000054, intron 2 of 3) -1984 FBgn0033085 FBgn0033085 FBtr0086114 CG15908 protein_coding CG8478-S2-modencode_R1_peak_614 chr3R 22362760 22362874 + 48 NA intron (FBgn0263289, intron 1 of 26) protein_coding-intron (FBgn0263289, intron 1 of 22) 745 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding CG8478-S2-modencode_R1_peak_711 chrX 3679075 3679167 + 48 NA exon (FBgn0086899, exon 5 of 8) protein_coding-exon (FBgn0086899, exon 5 of 8) -4954 FBgn0029676 FBgn0029676 FBtr0333764 HIP-R protein_coding CG8478-S2-modencode_R1_peak_382 chr3L 13221571 13221734 + 48 NA promoter-TSS (FBgn0023095) protein_coding-promoter-TSS (FBgn0023095) -140 FBgn0023095 FBgn0023095 FBtr0305480 caps protein_coding CG8478-S2-modencode_R1_peak_768 chrX 9586764 9587004 + 48 NA Intergenic Intergenic -1337 FBgn0000233 FBgn0000233 FBtr0071379 btd protein_coding CG8478-S2-modencode_R1_peak_135 chr2R 5296531 5296624 + 48 NA intron (FBgn0016078, intron 2 of 6) protein_coding-intron (FBgn0016078, intron 2 of 6) 4388 FBgn0016078 FBgn0016078 FBtr0306111 wun protein_coding CG8478-S2-modencode_R1_peak_620 chr3R 23107203 23107425 + 48 NA promoter-TSS (FBgn0039507) protein_coding-promoter-TSS (FBgn0039507) 1638 FBgn0039507 FBgn0039507 FBtr0305974 mrt protein_coding CG8478-S2-modencode_R1_peak_350 chr3L 8057046 8057199 + 48 NA exon (FBgn0262579, exon 1 of 12) protein_coding-exon (FBgn0262579, exon 1 of 12) 1703 FBgn0052361 FBgn0052361 FBtr0076741 tRNA:CR32361 tRNA CG8478-S2-modencode_R1_peak_176 chr2R 7090020 7090252 + 48 NA intron (FBgn0003396, intron 1 of 6) protein_coding-intron (FBgn0003396, intron 2 of 7) 16633 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding CG8478-S2-modencode_R1_peak_805 chrX 12557516 12557806 + 48 NA intron (FBgn0011837, intron 2 of 3) protein_coding-intron (FBgn0011837, intron 2 of 3) 4166 FBgn0053963 FBgn0053963 FBtr0100004 CR33963 ncRNA CG8478-S2-modencode_R1_peak_201 chr2R 8878557 8878683 + 48 NA Intergenic Intergenic -2782 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding CG8478-S2-modencode_R1_peak_503 chr3R 7774519 7774671 + 47 NA promoter-TSS (FBgn0051211) protein_coding-promoter-TSS (FBgn0051211) 256 FBgn0037963 FBgn0037963 FBtr0082513 Cad87A protein_coding CG8478-S2-modencode_R1_peak_111 chr2R 1669454 1669542 + 47 NA intron (FBgn0025693, intron 1 of 9) protein_coding-intron (FBgn0025693, intron 1 of 9) 862 FBgn0025693 FBgn0025693 FBtr0086056 CG11163 protein_coding CG8478-S2-modencode_R1_peak_319 chr3L 685355 685485 + 47 NA TTS (FBgn0035154) protein_coding-TTS (FBgn0035154) 129 FBgn0035153 FBgn0035153 FBtr0072610 ebd1 protein_coding CG8478-S2-modencode_R1_peak_705 chrX 3671203 3671291 + 47 NA promoter-TSS (FBgn0263532) pre_miRNA-promoter-TSS (FBgn0263532) -242 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_2 chr2L 5356 5447 + 47 NA Intergenic Intergenic -2128 FBgn0031208 FBgn0031208 FBtr0330654 CG11023 protein_coding CG8478-S2-modencode_R1_peak_784 chrX 10426175 10426287 + 47 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 34393 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_278 chr2R 17348103 17348244 + 47 NA intron (FBgn0010415, intron 2 of 6) protein_coding-intron (FBgn0010415, intron 2 of 5) -21261 FBgn0026369 FBgn0026369 FBtr0071642 Sara protein_coding CG8478-S2-modencode_R1_peak_496 chr3R 5934739 5935016 + 47 NA promoter-TSS (FBgn0028734) protein_coding-promoter-TSS (FBgn0028734) 966 FBgn0028734 FBgn0028734 FBtr0082196 Fmr1 protein_coding CG8478-S2-modencode_R1_peak_118 chr2R 2759608 2759733 + 47 NA intron (FBgn0033109, intron 1 of 6) protein_coding-intron (FBgn0033109, intron 1 of 6) 604 FBgn0033109 FBgn0033109 FBtr0086208 coro protein_coding CG8478-S2-modencode_R1_peak_433 chr3L 23689097 23689230 + 47 NA Intergenic Intergenic -19228 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding CG8478-S2-modencode_R1_peak_456 chr3R 2733877 2734028 + 47 NA exon (FBgn0260642, exon 5 of 5) protein_coding-exon (FBgn0260642, exon 5 of 5) -3548 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding CG8478-S2-modencode_R1_peak_264 chr2R 15338787 15338933 + 47 NA intron (FBgn0003887, intron 1 of 1) protein_coding-intron (FBgn0003887, intron 1 of 1) -1154 FBgn0034447 FBgn0034447 FBtr0086535 CG7744 protein_coding CG8478-S2-modencode_R1_peak_27 chr2L 4810101 4810267 + 47 NA Intergenic Intergenic -2825 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding CG8478-S2-modencode_R1_peak_341 chr3L 6982117 6982322 + 47 NA Intergenic Intergenic -1503 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding CG8478-S2-modencode_R1_peak_253 chr2R 14300931 14301155 + 47 NA intron (FBgn0027835, intron 2 of 6) protein_coding-intron (FBgn0027835, intron 2 of 6) 1532 FBgn0027835 FBgn0027835 FBtr0086681 Dp1 protein_coding CG8478-S2-modencode_R1_peak_775 chrX 10223851 10224033 + 47 NA promoter-TSS (FBgn0011770) protein_coding-promoter-TSS (FBgn0011770) -60 FBgn0011770 FBgn0011770 FBtr0071472 Gip protein_coding CG8478-S2-modencode_R1_peak_585 chr3R 19163127 19163216 + 47 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 8713 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_512 chr3R 8807596 8807839 + 46 NA intron (FBgn0038100, intron 1 of 3) protein_coding-intron (FBgn0038100, intron 1 of 3) 949 FBgn0038100 FBgn0038100 FBtr0082693 Paip2 protein_coding CG8478-S2-modencode_R1_peak_29 chr2L 5001363 5001673 + 46 NA intron (FBgn0053113, intron 1 of 4) protein_coding-intron (FBgn0053113, intron 1 of 4) 3410 FBgn0053113 FBgn0053113 FBtr0301538 Rtnl1 protein_coding CG8478-S2-modencode_R1_peak_282 chr2R 17602144 17602440 + 46 NA intron (FBgn0004362, intron 2 of 3) protein_coding-intron (FBgn0004362, intron 1 of 2) 1456 FBgn0004362 FBgn0004362 FBtr0301410 HmgD protein_coding CG8478-S2-modencode_R1_peak_237 chr2R 13280020 13280290 + 46 NA promoter-TSS (FBgn0050232) tRNA-promoter-TSS (FBgn0050232) 435 FBgn0011879 FBgn0011879 FBtr0086908 tRNA:H:56E tRNA CG8478-S2-modencode_R1_peak_608 chr3R 21943259 21943388 + 46 NA exon (FBgn0051324, exon 3 of 5) protein_coding-exon (FBgn0051324, exon 3 of 5) -9058 FBgn0039413 FBgn0039413 FBtr0273389 CG14556 protein_coding CG8478-S2-modencode_R1_peak_311 chr3L 629134 629243 + 46 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 718 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_766 chrX 9580236 9580334 + 46 NA promoter-TSS (FBgn0261617) protein_coding-promoter-TSS (FBgn0261617) 406 FBgn0261617 FBgn0261617 FBtr0302722 nej protein_coding CG8478-S2-modencode_R1_peak_687 chrX 3188810 3189086 + 46 NA promoter-TSS (FBgn0000479) protein_coding-promoter-TSS (FBgn0000479) 21487 FBgn0029656 FBgn0029656 FBtr0070536 CG10793 protein_coding CG8478-S2-modencode_R1_peak_391 chr3L 15525255 15525362 + 46 NA promoter-TSS (FBgn0262893) protein_coding-promoter-TSS (FBgn0262893) -735 FBgn0262893 FBgn0262893 FBtr0306309 CG43248 protein_coding CG8478-S2-modencode_R1_peak_12 chr2L 1668585 1668875 + 46 NA intron (FBgn0086758, intron 1 of 5) protein_coding-intron (FBgn0086758, intron 2 of 6) 17472 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_619 chr3R 23071380 23071482 + 45 NA promoter-TSS (FBgn0042111) protein_coding-promoter-TSS (FBgn0042111) -891 FBgn0042111 FBgn0042111 FBtr0333327 CG18766 protein_coding CG8478-S2-modencode_R1_peak_444 chr3R 1108587 1108738 + 45 NA exon (FBgn0013576, exon 1 of 5) protein_coding-exon (FBgn0013576, exon 1 of 5) -5105 FBgn0051538 FBgn0051538 FBtr0078819 CG31538 protein_coding CG8478-S2-modencode_R1_peak_600 chr3R 21714418 21714712 + 45 NA exon (FBgn0028717, exon 1 of 4) protein_coding-exon (FBgn0028717, exon 1 of 4) 226 FBgn0028717 FBgn0028717 FBtr0084937 Lnk protein_coding CG8478-S2-modencode_R1_peak_676 chrX 1515393 1515611 + 45 NA intron (FBgn0000210, intron 2 of 8) protein_coding-intron (FBgn0000210, intron 1 of 7) -3314 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding CG8478-S2-modencode_R1_peak_421 chr3L 18807392 18807597 + 45 NA intron (FBgn0036814, intron 2 of 5) protein_coding-intron (FBgn0036814, intron 2 of 5) 6281 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_165 chr2R 6755017 6755162 + 45 NA intron (FBgn0050015, intron 1 of 7) protein_coding-intron (FBgn0050015, intron 1 of 7) 7808 FBgn0050016 FBgn0050016 FBtr0088241 CG30016 protein_coding CG8478-S2-modencode_R1_peak_259 chr2R 14662843 14662991 + 45 NA promoter-TSS (FBgn0264679) ncRNA-promoter-TSS (FBgn0264679) 1 FBgn0264679 FBgn0264679 FBtr0333776 CR43964 ncRNA CG8478-S2-modencode_R1_peak_316 chr3L 640373 640682 + 45 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) -1732 FBgn0262451 FBgn0262451 FBtr0304469 ban pre_miRNA CG8478-S2-modencode_R1_peak_213 chr2R 9896137 9896266 + 44 NA promoter-TSS (FBgn0002643) protein_coding-promoter-TSS (FBgn0002643) -2715 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA CG8478-S2-modencode_R1_peak_21 chr2L 3534145 3534260 + 44 NA Intergenic Intergenic 3413 FBgn0031550 FBgn0031550 FBtr0077529 Che-13 protein_coding CG8478-S2-modencode_R1_peak_269 chr2R 15615078 15615197 + 44 NA promoter-TSS (FBgn0011849) tRNA-promoter-TSS (FBgn0011849) -101 FBgn0011849 FBgn0011849 FBtr0086447 tRNA:E4:56Fb tRNA CG8478-S2-modencode_R1_peak_362 chr3L 10845620 10845948 + 44 NA Intergenic Intergenic -5720 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_848 chrX 19390194 19390308 + 44 NA promoter-TSS (FBgn0027621) protein_coding-promoter-TSS (FBgn0027621) -1226 FBgn0040890 FBgn0040890 FBtr0300214 ksh protein_coding CG8478-S2-modencode_R1_peak_74 chr2L 11806894 11807146 + 44 NA intron (FBgn0020309, intron 1 of 7) protein_coding-intron (FBgn0020309, intron 1 of 7) 1952 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding CG8478-S2-modencode_R1_peak_284 chr2R 18100669 18100759 + 44 NA TTS (FBgn0034713) protein_coding-TTS (FBgn0034713) 368 FBgn0025186 FBgn0025186 FBtr0071774 ari-2 protein_coding CG8478-S2-modencode_R1_peak_725 chrX 6173380 6173479 + 44 NA promoter-TSS (FBgn0086558) protein_coding-promoter-TSS (FBgn0086558) -124 FBgn0086558 FBgn0086558 FBtr0070933 Ubi-p5E protein_coding CG8478-S2-modencode_R1_peak_638 chr3R 26629066 26629241 + 44 NA intron (FBgn0011739, intron 1 of 7) protein_coding-intron (FBgn0011739, intron 1 of 7) 3188 FBgn0011739 FBgn0011739 FBtr0085720 wts protein_coding CG8478-S2-modencode_R1_peak_723 chrX 5793512 5793651 + 44 NA Intergenic Intergenic -1313 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding CG8478-S2-modencode_R1_peak_602 chr3R 21867734 21867844 + 44 NA promoter-TSS (FBgn0001139) protein_coding-promoter-TSS (FBgn0001139) 357 FBgn0001139 FBgn0001139 FBtr0084965 gro protein_coding CG8478-S2-modencode_R1_peak_853 chrX 19531963 19532193 + 44 NA promoter-TSS (FBgn0031047) protein_coding-promoter-TSS (FBgn0031047) 307 FBgn0087008 FBgn0087008 FBtr0074762 e(y)3 protein_coding CG8478-S2-modencode_R1_peak_197 chr2R 8804570 8804659 + 44 NA promoter-TSS (FBgn0010488) protein_coding-promoter-TSS (FBgn0010488) 1112 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding CG8478-S2-modencode_R1_peak_761 chrX 9552426 9552594 + 44 NA TTS (FBgn0030148) protein_coding-TTS (FBgn0030148) 4281 FBgn0030148 FBgn0030148 FBtr0071403 CG3106 protein_coding CG8478-S2-modencode_R1_peak_800 chrX 11711604 11711759 + 44 NA promoter-TSS (FBgn0262684) protein_coding-promoter-TSS (FBgn0262684) -689 FBgn0262684 FBgn0262684 FBtr0333015 CG43154 protein_coding CG8478-S2-modencode_R1_peak_407 chr3L 17995791 17995886 + 44 NA TTS (FBgn0086081) snoRNA-TTS (FBgn0086081) 340 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_622 chr3R 24372979 24373275 + 43 NA Intergenic Intergenic -2603 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding CG8478-S2-modencode_R1_peak_266 chr2R 15348967 15349055 + 43 NA promoter-TSS (FBgn0260934) protein_coding-promoter-TSS (FBgn0260934) 5311 FBgn0002716 FBgn0002716 FBtr0086461 mei-W68 protein_coding CG8478-S2-modencode_R1_peak_174 chr2R 6996140 6996228 + 43 NA Intergenic Intergenic -1863 FBgn0040765 FBgn0040765 FBtr0088210 luna protein_coding CG8478-S2-modencode_R1_peak_497 chr3R 5935101 5935233 + 43 NA promoter-TSS (FBgn0028734) protein_coding-promoter-TSS (FBgn0028734) 676 FBgn0028734 FBgn0028734 FBtr0082196 Fmr1 protein_coding CG8478-S2-modencode_R1_peak_376 chr3L 12427597 12427853 + 43 NA Intergenic Intergenic -1957 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding CG8478-S2-modencode_R1_peak_807 chrX 12610034 12610129 + 43 NA intron (FBgn0263865, intron 3 of 10) protein_coding-intron (FBgn0263865, intron 2 of 9) 2412 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA CG8478-S2-modencode_R1_peak_51 chr2L 7976690 7976961 + 43 NA exon (FBgn0085450, exon 1 of 2) protein_coding-exon (FBgn0085450, exon 1 of 2) 240 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding CG8478-S2-modencode_R1_peak_203 chr2R 8879290 8879493 + 43 NA Intergenic Intergenic -2011 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding CG8478-S2-modencode_R1_peak_820 chrX 12679096 12679357 + 43 NA promoter-TSS (FBgn0052647) protein_coding-promoter-TSS (FBgn0052647) -235 FBgn0052647 FBgn0052647 FBtr0073703 CG32647 protein_coding CG8478-S2-modencode_R1_peak_404 chr3L 17955319 17955422 + 42 NA promoter-TSS (FBgn0000568) protein_coding-promoter-TSS (FBgn0000568) 28238 FBgn0262793 FBgn0262793 FBtr0305909 CG43174 protein_coding CG8478-S2-modencode_R1_peak_481 chr3R 5178506 5178613 + 42 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) -1431 FBgn0086053 FBgn0086053 FBtr0114329 snoRNA:Me18S-G1358a snoRNA CG8478-S2-modencode_R1_peak_405 chr3L 17988656 17988751 + 42 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) 7475 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_583 chr3R 19158985 19159082 + 42 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 12851 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_778 chrX 10260053 10260169 + 42 NA TTS (FBgn0052679) protein_coding-TTS (FBgn0052679) 235 FBgn0028331 FBgn0028331 FBtr0071470 l(1)G0289 protein_coding CG8478-S2-modencode_R1_peak_636 chr3R 26625796 26625894 + 42 NA exon (FBgn0011739, exon 2 of 8) protein_coding-exon (FBgn0011739, exon 2 of 8) 6496 FBgn0011739 FBgn0011739 FBtr0085720 wts protein_coding CG8478-S2-modencode_R1_peak_502 chr3R 6503384 6503472 + 42 NA promoter-TSS (FBgn0037818) protein_coding-promoter-TSS (FBgn0037818) -536 FBgn0037818 FBgn0037818 FBtr0082323 CG6465 protein_coding CG8478-S2-modencode_R1_peak_734 chrX 7589927 7590116 + 42 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) -1070 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding CG8478-S2-modencode_R1_peak_709 chrX 3674690 3674790 + 42 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) 3251 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_789 chrX 10428506 10428656 + 42 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 32043 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_317 chr3L 647216 647467 + 41 NA Intergenic Intergenic -1433 FBgn0035147 FBgn0035147 FBtr0306917 Gale protein_coding CG8478-S2-modencode_R1_peak_617 chr3R 23070567 23070784 + 41 NA promoter-TSS (FBgn0042111) protein_coding-promoter-TSS (FBgn0042111) -135 FBgn0042111 FBgn0042111 FBtr0333327 CG18766 protein_coding CG8478-S2-modencode_R1_peak_514 chr3R 8838678 8838772 + 41 NA intron (FBgn0020496, intron 1 of 5) protein_coding-intron (FBgn0020496, intron 1 of 5) 1337 FBgn0020496 FBgn0020496 FBtr0082702 CtBP protein_coding CG8478-S2-modencode_R1_peak_42 chr2L 6787423 6787632 + 41 NA promoter-TSS (FBgn0015776) protein_coding-promoter-TSS (FBgn0015776) -666 FBgn0015776 FBgn0015776 FBtr0332370 nrv1 protein_coding CG8478-S2-modencode_R1_peak_84 chr2L 14011417 14011519 + 41 NA promoter-TSS (FBgn0028909) tRNA-promoter-TSS (FBgn0028909) -832 FBgn0028909 FBgn0028909 FBtr0080609 tRNA:Q:34E tRNA CG8478-S2-modencode_R1_peak_198 chr2R 8804811 8804928 + 41 NA promoter-TSS (FBgn0010488) protein_coding-promoter-TSS (FBgn0010488) 1367 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding CG8478-S2-modencode_R1_peak_330 chr3L 3461578 3461685 + 41 NA promoter-TSS (FBgn0026259) protein_coding-promoter-TSS (FBgn0026259) 316 FBgn0041164 FBgn0041164 FBtr0309840 armi protein_coding CG8478-S2-modencode_R1_peak_289 chr2R 18314461 18314551 + 41 NA promoter-TSS (FBgn0034730) protein_coding-promoter-TSS (FBgn0034730) -47 FBgn0034729 FBgn0034729 FBtr0071841 CG10344 protein_coding CG8478-S2-modencode_R1_peak_703 chrX 3666756 3666998 + 41 NA exon (FBgn0086899, exon 1 of 9) protein_coding-exon (FBgn0086899, exon 1 of 9) 204 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_802 chrX 12534963 12535112 + 41 NA intron (FBgn0030412, intron 14 of 23) protein_coding-intron (FBgn0030412, intron 13 of 22) 4608 FBgn0262187 FBgn0262187 FBtr0304204 mir-970 pre_miRNA CG8478-S2-modencode_R1_peak_88 chr2L 16325184 16325322 + 41 NA exon (FBgn0000250, exon 1 of 6) protein_coding-exon (FBgn0000250, exon 1 of 6) 190 FBgn0000250 FBgn0000250 FBtr0080846 cact protein_coding CG8478-S2-modencode_R1_peak_489 chr3R 5910014 5910150 + 41 NA Intergenic Intergenic -6821 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_260 chr2R 14688028 14688191 + 41 NA intron (FBgn0010651, intron 1 of 3) protein_coding-intron (FBgn0010651, intron 2 of 4) 1795 FBgn0010651 FBgn0010651 FBtr0086635 l(2)08717 protein_coding CG8478-S2-modencode_R1_peak_521 chr3R 10515582 10515681 + 41 NA intron (FBgn0051314, intron 1 of 6) protein_coding-intron (FBgn0051314, intron 1 of 7) 7426 FBgn0051314 FBgn0051314 FBtr0301499 Neu3 protein_coding CG8478-S2-modencode_R1_peak_354 chr3L 9403454 9403636 + 41 NA promoter-TSS (FBgn0035987) protein_coding-promoter-TSS (FBgn0035987) 387 FBgn0035986 FBgn0035986 FBtr0076486 CG4022 protein_coding CG8478-S2-modencode_R1_peak_225 chr2R 12038190 12038379 + 40 NA exon (FBgn0034083, exon 1 of 9) protein_coding-exon (FBgn0034083, exon 1 of 9) 656 FBgn0034083 FBgn0034083 FBtr0302084 lbk protein_coding CG8478-S2-modencode_R1_peak_64 chr2L 9568400 9568530 + 40 NA promoter-TSS (FBgn0032130) protein_coding-promoter-TSS (FBgn0032130) -1852 FBgn0032130 FBgn0032130 FBtr0079835 CG3838 protein_coding CG8478-S2-modencode_R1_peak_334 chr3L 4626101 4626278 + 40 NA promoter-TSS (FBgn0015805) protein_coding-promoter-TSS (FBgn0015805) -57 FBgn0262733 FBgn0262733 FBtr0302594 Src64B protein_coding CG8478-S2-modencode_R1_peak_281 chr2R 17596744 17596953 + 40 NA TTS (FBgn0050403) protein_coding-TTS (FBgn0050403) 2266 FBgn0050403 FBgn0050403 FBtr0114523 CG30403 protein_coding CG8478-S2-modencode_R1_peak_678 chrX 1517025 1517184 + 40 NA intron (FBgn0000210, intron 1 of 7) protein_coding-intron (FBgn0000210, intron 1 of 7) -4916 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding CG8478-S2-modencode_R1_peak_507 chr3R 8542424 8542544 + 40 NA intron (FBgn0002719, intron 1 of 2) protein_coding-intron (FBgn0002719, intron 2 of 3) 3030 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_437 chr3LHet 715430 715840 + 40 NA NA NA NA NA CG8478-S2-modencode_R1_peak_740 chrX 7603439 7603625 + 40 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) 1724 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_46 chr2L 7038858 7038948 + 40 NA TTS (FBgn0031883) protein_coding-TTS (FBgn0031883) -3456 FBgn0262872 FBgn0262872 FBtr0306230 milt protein_coding CG8478-S2-modencode_R1_peak_157 chr2R 6454049 6454248 + 39 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 8755 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_557 chr3R 14989932 14990067 + 39 NA promoter-TSS (FBgn0010768) protein_coding-promoter-TSS (FBgn0010768) 56 FBgn0010768 FBgn0010768 FBtr0083733 sqz protein_coding CG8478-S2-modencode_R1_peak_615 chr3R 22780034 22780255 + 39 NA intron (FBgn0039464, intron 2 of 5) protein_coding-intron (FBgn0039464, intron 2 of 5) -1169 FBgn0039464 FBgn0039464 FBtr0085085 CG6330 protein_coding CG8478-S2-modencode_R1_peak_546 chr3R 13526756 13526890 + 39 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) -14040 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding CG8478-S2-modencode_R1_peak_523 chr3R 10563676 10563843 + 39 NA intron (FBgn0011217, intron 1 of 4) protein_coding-intron (FBgn0011217, intron 2 of 5) 2727 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding CG8478-S2-modencode_R1_peak_532 chr3R 11830779 11830872 + 39 NA exon (FBgn0262028, exon 2 of 2) ncRNA-exon (FBgn0262028, exon 2 of 2) 2970 FBgn0262028 FBgn0262028 FBtr0303861 CR42839 ncRNA CG8478-S2-modencode_R1_peak_75 chr2L 11807430 11807558 + 39 NA intron (FBgn0020309, intron 1 of 7) protein_coding-intron (FBgn0020309, intron 1 of 7) 1478 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding CG8478-S2-modencode_R1_peak_457 chr3R 2738557 2738968 + 39 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) -8358 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding CG8478-S2-modencode_R1_peak_123 chr2R 3552997 3553102 + 39 NA promoter-TSS (FBgn0033205) protein_coding-promoter-TSS (FBgn0033205) -289 FBgn0033205 FBgn0033205 FBtr0088923 CG2064 protein_coding CG8478-S2-modencode_R1_peak_226 chr2R 12157987 12158164 + 39 NA intron (FBgn0001308, intron 1 of 3) protein_coding-intron (FBgn0001308, intron 1 of 3) 1408 FBgn0001308 FBgn0001308 FBtr0087184 Khc protein_coding CG8478-S2-modencode_R1_peak_243 chr2R 13604604 13604739 + 39 NA promoter-TSS (FBgn0028494) protein_coding-promoter-TSS (FBgn0028494) -5173 FBgn0034263 FBgn0034263 FBtr0086859 CG10934 protein_coding CG8478-S2-modencode_R1_peak_68 chr2L 11045225 11045470 + 39 NA intron (FBgn0032330, intron 2 of 6) protein_coding-intron (FBgn0032330, intron 2 of 6) 10498 FBgn0040967 FBgn0040967 FBtr0080160 CG18666 protein_coding CG8478-S2-modencode_R1_peak_349 chr3L 8051551 8051681 + 39 NA exon (FBgn0026263, exon 1 of 4) protein_coding-exon (FBgn0026263, exon 1 of 4) 1780 FBgn0052358 FBgn0052358 FBtr0076744 tRNA:CR32358 tRNA CG8478-S2-modencode_R1_peak_58 chr2L 8478044 8478195 + 39 NA promoter-TSS (FBgn0262029) protein_coding-promoter-TSS (FBgn0262029) 770 FBgn0053194 FBgn0053194 FBtr0079676 CheA29a protein_coding CG8478-S2-modencode_R1_peak_644 chr3R 27049857 27050120 + 39 NA promoter-TSS (FBgn0039831) protein_coding-promoter-TSS (FBgn0039831) 3562 FBgn0039831 FBgn0039831 FBtr0113312 CG12054 protein_coding CG8478-S2-modencode_R1_peak_785 chrX 10426436 10426559 + 39 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 34127 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_426 chr3L 21469859 21470016 + 39 NA promoter-TSS (FBgn0014143) protein_coding-promoter-TSS (FBgn0014143) -358 FBgn0014143 FBgn0014143 FBtr0078395 croc protein_coding CG8478-S2-modencode_R1_peak_480 chr3R 5177538 5177644 + 39 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) -2399 FBgn0086053 FBgn0086053 FBtr0114329 snoRNA:Me18S-G1358a snoRNA CG8478-S2-modencode_R1_peak_385 chr3L 13997176 13997380 + 39 NA intron (FBgn0036398, intron 2 of 7) protein_coding-intron (FBgn0036398, intron 2 of 7) 2051 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding CG8478-S2-modencode_R1_peak_128 chr2R 3918397 3918672 + 39 NA promoter-TSS (FBgn0025360) protein_coding-promoter-TSS (FBgn0025360) -255 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding CG8478-S2-modencode_R1_peak_828 chrX 15646054 15646152 + 38 NA TTS (FBgn0030683) protein_coding-TTS (FBgn0030683) 2893 FBgn0030683 FBgn0030683 FBtr0074087 CG8239 protein_coding CG8478-S2-modencode_R1_peak_842 chrX 18260181 18260413 + 38 NA promoter-TSS (FBgn0014467) protein_coding-promoter-TSS (FBgn0014467) -436 FBgn0014467 FBgn0014467 FBtr0300205 CrebB-17A protein_coding CG8478-S2-modencode_R1_peak_492 chr3R 5915343 5915446 + 38 NA Intergenic Intergenic -1509 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_219 chr2R 10369523 10369702 + 38 NA intron (FBgn0001332, intron 1 of 3) protein_coding-intron (FBgn0001332, intron 1 of 3) 896 FBgn0001332 FBgn0001332 FBtr0087492 L protein_coding CG8478-S2-modencode_R1_peak_98 chr2L 20822904 20823004 + 38 NA Intergenic Intergenic -1482 FBgn0032889 FBgn0032889 FBtr0081418 CG9331 protein_coding CG8478-S2-modencode_R1_peak_62 chr2L 9176584 9176715 + 38 NA intron (FBgn0041092, intron 1 of 13) protein_coding-intron (FBgn0041092, intron 1 of 14) 9871 FBgn0041092 FBgn0041092 FBtr0303872 tai protein_coding CG8478-S2-modencode_R1_peak_719 chrX 4977655 4977817 + 38 NA promoter-TSS (FBgn0052767) protein_coding-promoter-TSS (FBgn0052767) -678 FBgn0052767 FBgn0052767 FBtr0300994 CG32767 protein_coding CG8478-S2-modencode_R1_peak_801 chrX 12528073 12528282 + 38 NA intron (FBgn0030412, intron 2 of 23) protein_coding-intron (FBgn0030412, intron 1 of 22) -2252 FBgn0262187 FBgn0262187 FBtr0304204 mir-970 pre_miRNA CG8478-S2-modencode_R1_peak_747 chrX 8463212 8463326 + 38 NA TTS (FBgn0030050) protein_coding-TTS (FBgn0030050) 1712 FBgn0030050 FBgn0030050 FBtr0071232 CG12111 protein_coding CG8478-S2-modencode_R1_peak_672 chrX 530846 531279 + 38 NA intron (FBgn0003575, intron 1 of 5) protein_coding-intron (FBgn0003575, intron 1 of 5) 1142 FBgn0003575 FBgn0003575 FBtr0070120 su(s) protein_coding CG8478-S2-modencode_R1_peak_352 chr3L 8152198 8152349 + 38 NA promoter-TSS (FBgn0259916) protein_coding-promoter-TSS (FBgn0259916) -273 FBgn0259916 FBgn0259916 FBtr0332760 CG42445 protein_coding CG8478-S2-modencode_R1_peak_107 chr2L 22364268 22364508 + 38 NA intron (FBgn0039972, intron 3 of 7) protein_coding-intron (FBgn0039972, intron 2 of 6) 10033 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding CG8478-S2-modencode_R1_peak_765 chrX 9580000 9580146 + 38 NA promoter-TSS (FBgn0261617) protein_coding-promoter-TSS (FBgn0261617) 618 FBgn0261617 FBgn0261617 FBtr0302722 nej protein_coding CG8478-S2-modencode_R1_peak_293 chr2R 19524147 19524243 + 38 NA intron (FBgn0004795, intron 1 of 11) protein_coding-intron (FBgn0004795, intron 1 of 11) 4060 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding CG8478-S2-modencode_R1_peak_17 chr2L 1987397 1987641 + 38 NA promoter-TSS (FBgn0031381) protein_coding-promoter-TSS (FBgn0031381) 269 FBgn0001125 FBgn0001125 FBtr0077868 Got2 protein_coding CG8478-S2-modencode_R1_peak_592 chr3R 20146171 20146300 + 38 NA intron (FBgn0011785, intron 4 of 14) protein_coding-intron (FBgn0011785, intron 4 of 14) 1494 FBgn0011785 FBgn0011785 FBtr0084604 BRWD3 protein_coding CG8478-S2-modencode_R1_peak_714 chrX 4255759 4255878 + 38 NA intron (FBgn0262738, intron 15 of 15) protein_coding-intron (FBgn0262738, intron 14 of 14) 4098 FBgn0262339 FBgn0262339 FBtr0304529 mir-982 pre_miRNA CG8478-S2-modencode_R1_peak_857 chrX 19781703 19781804 + 38 NA exon (FBgn0086782, exon 1 of 1) protein_coding-exon (FBgn0086782, exon 1 of 1) 2340 FBgn0086782 FBgn0086782 FBtr0074802 amn protein_coding CG8478-S2-modencode_R1_peak_553 chr3R 14300427 14300579 + 38 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) -63150 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_590 chr3R 20038123 20038243 + 38 NA intron (FBgn0011725, intron 5 of 7) protein_coding-intron (FBgn0011725, intron 5 of 7) 6257 FBgn0039167 FBgn0039167 FBtr0084572 CG17786 protein_coding CG8478-S2-modencode_R1_peak_467 chr3R 4160089 4160194 + 38 NA promoter-TSS (FBgn0003129) protein_coding-promoter-TSS (FBgn0003129) -627 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding CG8478-S2-modencode_R1_peak_786 chrX 10426834 10426944 + 38 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 33735 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_26 chr2L 4371955 4372157 + 37 NA promoter-TSS (FBgn0026319) protein_coding-promoter-TSS (FBgn0026319) -6484 FBgn0026319 FBgn0026319 FBtr0290244 Traf4 protein_coding CG8478-S2-modencode_R1_peak_561 chr3R 16604262 16604432 + 37 NA intron (FBgn0038826, intron 2 of 11) protein_coding-intron (FBgn0038826, intron 2 of 11) -6024 FBgn0046689 FBgn0046689 FBtr0083996 Takl1 protein_coding CG8478-S2-modencode_R1_peak_145 chr2R 5988546 5988671 + 37 NA promoter-TSS (FBgn0004907) protein_coding-promoter-TSS (FBgn0004907) -1517 FBgn0033485 FBgn0033485 FBtr0088425 RpLP0-like protein_coding CG8478-S2-modencode_R1_peak_425 chr3L 21233220 21233318 + 37 NA promoter-TSS (FBgn0004865) protein_coding-promoter-TSS (FBgn0004865) 13560 FBgn0004865 FBgn0004865 FBtr0078307 Eip78C protein_coding CG8478-S2-modencode_R1_peak_824 chrX 13785245 13785333 + 37 NA intron (FBgn0263115, intron 3 of 7) protein_coding-intron (FBgn0263115, intron 2 of 4) -34132 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding CG8478-S2-modencode_R1_peak_817 chrX 12649098 12649313 + 37 NA Intergenic Intergenic 5445 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding CG8478-S2-modencode_R1_peak_573 chr3R 17721457 17721623 + 37 NA intron (FBgn0038917, intron 4 of 4) protein_coding-intron (FBgn0038917, intron 4 of 4) 6279 FBgn0264426 FBgn0264426 FBtr0332545 CR43844 ncRNA CG8478-S2-modencode_R1_peak_70 chr2L 11447465 11447664 + 37 NA Intergenic Intergenic -1961 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding CG8478-S2-modencode_R1_peak_531 chr3R 11810441 11810543 + 37 NA Intergenic Intergenic -1431 FBgn0003507 FBgn0003507 FBtr0083216 srp protein_coding CG8478-S2-modencode_R1_peak_274 chr2R 16801645 16801764 + 37 NA Intergenic Intergenic -2581 FBgn0020617 FBgn0020617 FBtr0071518 Rx protein_coding CG8478-S2-modencode_R1_peak_607 chr3R 21934403 21934542 + 36 NA exon (FBgn0051324, exon 2 of 5) protein_coding-exon (FBgn0051324, exon 2 of 5) -10039 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_707 chrX 3673219 3673387 + 36 NA promoter-TSS (FBgn0086899) protein_coding-promoter-TSS (FBgn0086899) 1814 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_130 chr2R 4019293 4019514 + 36 NA promoter-TSS (FBgn0260398) protein_coding-promoter-TSS (FBgn0260398) 465 FBgn0005648 FBgn0005648 FBtr0088786 Pabp2 protein_coding CG8478-S2-modencode_R1_peak_736 chrX 7590843 7590984 + 36 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) -1962 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding CG8478-S2-modencode_R1_peak_231 chr2R 12548059 12548222 + 36 NA intron (FBgn0024315, intron 2 of 5) protein_coding-intron (FBgn0024315, intron 2 of 5) -1482 FBgn0024315 FBgn0024315 FBtr0087115 Picot protein_coding CG8478-S2-modencode_R1_peak_649 chr4 1041832 1041937 + 36 NA intron (FBgn0025741, intron 1 of 8) protein_coding-intron (FBgn0025741, intron 2 of 9) 5836 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding CG8478-S2-modencode_R1_peak_860 chrX 20053679 20053777 + 36 NA TTS (FBgn0031091) protein_coding-TTS (FBgn0031091) 177 FBgn0031090 FBgn0031090 FBtr0333548 Rab35 protein_coding CG8478-S2-modencode_R1_peak_461 chr3R 2948614 2948709 + 36 NA intron (FBgn0261238, intron 1 of 9) protein_coding-intron (FBgn0261238, intron 1 of 9) -1611 FBgn0037472 FBgn0037472 FBtr0081563 CG10098 protein_coding CG8478-S2-modencode_R1_peak_356 chr3L 10515607 10515743 + 36 NA intron (FBgn0052062, intron 2 of 13) protein_coding-intron (FBgn0052062, intron 2 of 14) 6572 FBgn0052062 FBgn0052062 FBtr0305094 A2bp1 protein_coding CG8478-S2-modencode_R1_peak_454 chr3R 2675724 2675823 + 36 NA promoter-TSS (FBgn0003339) protein_coding-promoter-TSS (FBgn0003339) -70 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding CG8478-S2-modencode_R1_peak_91 chr2L 16612222 16612310 + 36 NA intron (FBgn0259735, intron 2 of 5) protein_coding-intron (FBgn0259735, intron 2 of 4) 4843 FBgn0032590 FBgn0032590 FBtr0080871 CG4631 protein_coding CG8478-S2-modencode_R1_peak_224 chr2R 11748895 11749176 + 36 NA promoter-TSS (FBgn0022160) protein_coding-promoter-TSS (FBgn0022160) -186 FBgn0022160 FBgn0022160 FBtr0112900 Gpo-1 protein_coding CG8478-S2-modencode_R1_peak_249 chr2R 14029350 14029471 + 36 NA promoter-TSS (FBgn0083054) snoRNA-promoter-TSS (FBgn0083054) 588 FBgn0261619 FBgn0261619 FBtr0086740 pAbp protein_coding CG8478-S2-modencode_R1_peak_708 chrX 3674252 3674444 + 36 NA exon (FBgn0086899, exon 1 of 8) protein_coding-exon (FBgn0086899, exon 1 of 8) 2859 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_122 chr2R 3502486 3502586 + 36 NA promoter-TSS (FBgn0033196) protein_coding-promoter-TSS (FBgn0033196) 5680 FBgn0033196 FBgn0033196 FBtr0088950 CG1358 protein_coding CG8478-S2-modencode_R1_peak_57 chr2L 8423374 8423523 + 36 NA intron (FBgn0027932, intron 1 of 4) protein_coding-intron (FBgn0027932, intron 1 of 5) 7758 FBgn0027932 FBgn0027932 FBtr0079666 Akap200 protein_coding CG8478-S2-modencode_R1_peak_445 chr3R 1108805 1108893 + 36 NA exon (FBgn0013576, exon 1 of 5) protein_coding-exon (FBgn0013576, exon 1 of 5) -5292 FBgn0051538 FBgn0051538 FBtr0078819 CG31538 protein_coding CG8478-S2-modencode_R1_peak_399 chr3L 17526682 17526917 + 36 NA promoter-TSS (FBgn0259174) protein_coding-promoter-TSS (FBgn0259174) 3618 FBgn0259174 FBgn0259174 FBtr0299642 Nedd4 protein_coding CG8478-S2-modencode_R1_peak_37 chr2L 5307039 5307127 + 35 NA intron (FBgn0016076, intron 1 of 2) protein_coding-intron (FBgn0016076, intron 1 of 2) 1361 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_242 chr2R 13604219 13604351 + 35 NA promoter-TSS (FBgn0028494) protein_coding-promoter-TSS (FBgn0028494) -5559 FBgn0034263 FBgn0034263 FBtr0086859 CG10934 protein_coding CG8478-S2-modencode_R1_peak_369 chr3L 11113438 11113623 + 35 NA promoter-TSS (FBgn0036135) protein_coding-promoter-TSS (FBgn0036135) 345 FBgn0036134 FBgn0036134 FBtr0300785 fd68A protein_coding CG8478-S2-modencode_R1_peak_858 chrX 19788138 19788230 + 35 NA intron (FBgn0052529, intron 1 of 5) protein_coding-intron (FBgn0052529, intron 4 of 8) -4091 FBgn0086782 FBgn0086782 FBtr0074802 amn protein_coding CG8478-S2-modencode_R1_peak_633 chr3R 26161086 26161239 + 35 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) -28803 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_406 chr3L 17995340 17995510 + 35 NA TTS (FBgn0086081) snoRNA-TTS (FBgn0086081) 753 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_156 chr2R 6452343 6452612 + 35 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 7084 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_364 chr3L 10850159 10850247 + 35 NA promoter-TSS (FBgn0026160) protein_coding-promoter-TSS (FBgn0026160) -1301 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_428 chr3L 21762700 21762790 + 34 NA promoter-TSS (FBgn0037133) protein_coding-promoter-TSS (FBgn0037133) -170 FBgn0037133 FBgn0037133 FBtr0078436 CG7370 protein_coding CG8478-S2-modencode_R1_peak_73 chr2L 11806587 11806823 + 34 NA intron (FBgn0020309, intron 1 of 7) protein_coding-intron (FBgn0020309, intron 1 of 7) 2267 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding CG8478-S2-modencode_R1_peak_474 chr3R 4645605 4645724 + 34 NA promoter-TSS (FBgn0262604) protein_coding-promoter-TSS (FBgn0262604) 324 FBgn0262604 FBgn0262604 FBtr0305278 CG43130 protein_coding CG8478-S2-modencode_R1_peak_86 chr2L 14581004 14581150 + 34 NA Intergenic Intergenic 7157 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding CG8478-S2-modencode_R1_peak_757 chrX 9388221 9388407 + 34 NA intron (FBgn0261260, intron 1 of 2) protein_coding-intron (FBgn0261260, intron 1 of 14) 1907 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_44 chr2L 7038149 7038278 + 34 NA TTS (FBgn0031883) protein_coding-TTS (FBgn0031883) -4146 FBgn0262872 FBgn0262872 FBtr0306230 milt protein_coding CG8478-S2-modencode_R1_peak_686 chrX 3057020 3057125 + 34 NA intron (FBgn0004647, intron 5 of 8) protein_coding-intron (FBgn0004647, intron 5 of 8) 10101 FBgn0028746 FBgn0028746 FBtr0070543 CG18508 protein_coding CG8478-S2-modencode_R1_peak_582 chr3R 19152167 19152262 + 34 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 19670 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_152 chr2R 6416381 6416561 + 34 NA intron (FBgn0005630, intron 5 of 6) protein_coding-intron (FBgn0005630, intron 5 of 5) 6112 FBgn0005630 FBgn0005630 FBtr0089362 lola protein_coding CG8478-S2-modencode_R1_peak_16 chr2L 1987211 1987299 + 34 NA promoter-TSS (FBgn0001125) protein_coding-promoter-TSS (FBgn0001125) 533 FBgn0001125 FBgn0001125 FBtr0077868 Got2 protein_coding CG8478-S2-modencode_R1_peak_228 chr2R 12467605 12467703 + 34 NA promoter-TSS (FBgn0016131) protein_coding-promoter-TSS (FBgn0016131) 25 FBgn0016131 FBgn0016131 FBtr0087104 Cdk4 protein_coding CG8478-S2-modencode_R1_peak_694 chrX 3571655 3571885 + 34 NA intron (FBgn0023215, intron 1 of 8) protein_coding-intron (FBgn0023215, intron 1 of 8) -6235 FBgn0023216 FBgn0023216 FBtr0307279 Parg protein_coding CG8478-S2-modencode_R1_peak_140 chr2R 5751235 5751324 + 34 NA promoter-TSS (FBgn0050010) protein_coding-promoter-TSS (FBgn0050010) 123 FBgn0050010 FBgn0050010 FBtr0088374 CG30010 protein_coding CG8478-S2-modencode_R1_peak_102 chr2L 21628844 21628949 + 33 NA intron (FBgn0022893, intron 1 of 2) protein_coding-intron (FBgn0022893, intron 1 of 2) 1036 FBgn0022893 FBgn0022893 FBtr0085920 Df31 protein_coding CG8478-S2-modencode_R1_peak_508 chr3R 8542862 8542950 + 33 NA intron (FBgn0002719, intron 1 of 2) protein_coding-intron (FBgn0002719, intron 2 of 3) 2608 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_741 chrX 7603803 7603953 + 33 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) 2070 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_365 chr3L 10850667 10850874 + 33 NA promoter-TSS (FBgn0026160) protein_coding-promoter-TSS (FBgn0026160) -734 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_9 chr2L 1643636 1643812 + 33 NA Intergenic Intergenic -7534 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_1 chr2L 5122 5305 + 33 NA Intergenic Intergenic -2316 FBgn0031208 FBgn0031208 FBtr0330654 CG11023 protein_coding CG8478-S2-modencode_R1_peak_727 chrX 6428209 6428321 + 33 NA promoter-TSS (FBgn0014026) protein_coding-promoter-TSS (FBgn0014026) 222 FBgn0000524 FBgn0000524 FBtr0070914 dx protein_coding CG8478-S2-modencode_R1_peak_844 chrX 18268796 18268912 + 33 NA TTS (FBgn0014467) protein_coding-TTS (FBgn0014467) -4703 FBgn0263769 FBgn0263769 FBtr0310488 CR43686 ncRNA CG8478-S2-modencode_R1_peak_389 chr3L 14667205 14667295 + 33 NA promoter-TSS (FBgn0011928) tRNA-promoter-TSS (FBgn0011928) -137 FBgn0011927 FBgn0011927 FBtr0075713 tRNA:M3:70Fa tRNA CG8478-S2-modencode_R1_peak_743 chrX 7604201 7604311 + 33 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) 2448 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_631 chr3R 26106973 26107129 + 33 NA intron (FBgn0010113, intron 1 of 5) protein_coding-intron (FBgn0010113, intron 1 of 5) 3395 FBgn0010113 FBgn0010113 FBtr0085620 hdc protein_coding CG8478-S2-modencode_R1_peak_856 chrX 19778252 19778375 + 33 NA intron (FBgn0052529, intron 1 of 6) protein_coding-intron (FBgn0052529, intron 4 of 8) 5780 FBgn0086782 FBgn0086782 FBtr0074802 amn protein_coding CG8478-S2-modencode_R1_peak_528 chr3R 11069252 11069517 + 33 NA promoter-TSS (FBgn0001219) protein_coding-promoter-TSS (FBgn0001219) -557 FBgn0001219 FBgn0001219 FBtr0083056 Hsc70-4 protein_coding CG8478-S2-modencode_R1_peak_375 chr3L 12427206 12427340 + 33 NA Intergenic Intergenic -1505 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding CG8478-S2-modencode_R1_peak_520 chr3R 9850662 9850827 + 33 NA intron (FBgn0264493, intron 1 of 8) protein_coding-intron (FBgn0264493, intron 1 of 8) 937 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding CG8478-S2-modencode_R1_peak_843 chrX 18265328 18265711 + 33 NA promoter-TSS (FBgn0014467) protein_coding-promoter-TSS (FBgn0014467) -1368 FBgn0263769 FBgn0263769 FBtr0310488 CR43686 ncRNA CG8478-S2-modencode_R1_peak_822 chrX 13783137 13783228 + 33 NA intron (FBgn0263115, intron 3 of 7) protein_coding-intron (FBgn0263115, intron 2 of 4) -32025 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding CG8478-S2-modencode_R1_peak_663 chrUextra 439422 439522 + 33 NA NA NA NA NA CG8478-S2-modencode_R1_peak_788 chrX 10427920 10428080 + 32 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 32624 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_5 chr2L 247508 247758 + 32 NA intron (FBgn0086902, intron 1 of 16) protein_coding-intron (FBgn0086902, intron 1 of 17) 3190 FBgn0086902 FBgn0086902 FBtr0078145 kis protein_coding CG8478-S2-modencode_R1_peak_409 chr3L 18009755 18009916 + 32 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -13657 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_591 chr3R 20059946 20060044 + 32 NA intron (FBgn0043884, intron 2 of 16) protein_coding-intron (FBgn0043884, intron 2 of 16) -2885 FBgn0261452 FBgn0261452 FBtr0309753 scaRNA:mgU2-25 snoRNA CG8478-S2-modencode_R1_peak_294 chr2R 19545313 19545401 + 32 NA exon (FBgn0034886, exon 1 of 19) protein_coding-exon (FBgn0034886, exon 1 of 19) 263 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding CG8478-S2-modencode_R1_peak_845 chrX 19047160 19047313 + 32 NA exon (FBgn0261461, exon 2 of 8) protein_coding-exon (FBgn0261461, exon 2 of 8) -6459 FBgn0261461 FBgn0261461 FBtr0299625 RhoGAP18B protein_coding CG8478-S2-modencode_R1_peak_495 chr3R 5934481 5934626 + 32 NA promoter-TSS (FBgn0028734) protein_coding-promoter-TSS (FBgn0028734) 1290 FBgn0028734 FBgn0028734 FBtr0082196 Fmr1 protein_coding CG8478-S2-modencode_R1_peak_191 chr2R 8340773 8340901 + 32 NA TTS (FBgn0033739) protein_coding-TTS (FBgn0033739) 141 FBgn0010238 FBgn0010238 FBtr0087933 Lac protein_coding CG8478-S2-modencode_R1_peak_211 chr2R 9888371 9888470 + 32 NA intron (FBgn0002643, intron 2 of 6) protein_coding-intron (FBgn0002643, intron 2 of 6) 5066 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA CG8478-S2-modencode_R1_peak_113 chr2R 2056533 2056643 + 32 NA promoter-TSS (FBgn0011956) tRNA-promoter-TSS (FBgn0011956) -524 FBgn0011956 FBgn0011956 FBtr0085985 tRNA:R2:42Ab tRNA CG8478-S2-modencode_R1_peak_286 chr2R 18130500 18130688 + 32 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -14870 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding CG8478-S2-modencode_R1_peak_839 chrX 17546152 17546301 + 32 NA promoter-TSS (FBgn0026375) protein_coding-promoter-TSS (FBgn0026375) 369 FBgn0026375 FBgn0026375 FBtr0074481 RhoGAPp190 protein_coding CG8478-S2-modencode_R1_peak_692 chrX 3284328 3284427 + 32 NA exon (FBgn0262656, exon 3 of 3) protein_coding-exon (FBgn0262656, exon 3 of 3) 17185 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_704 chrX 3670235 3670340 + 32 NA exon (FBgn0086899, exon 2 of 9) protein_coding-exon (FBgn0086899, exon 2 of 9) -1202 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_161 chr2R 6491539 6491648 + 32 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) -18115 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_689 chrX 3274758 3275005 + 32 NA intron (FBgn0262656, intron 2 of 2) protein_coding-intron (FBgn0262656, intron 2 of 2) 7689 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_190 chr2R 8061248 8061347 + 32 NA promoter-TSS (FBgn0010621) protein_coding-promoter-TSS (FBgn0010621) -1304 FBgn0010621 FBgn0010621 FBtr0087988 Cct5 protein_coding CG8478-S2-modencode_R1_peak_733 chrX 7589409 7589497 + 32 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) -502 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding CG8478-S2-modencode_R1_peak_337 chr3L 5919827 5919989 + 32 NA promoter-TSS (FBgn0053523) protein_coding-promoter-TSS (FBgn0053523) 2755 FBgn0053523 FBgn0053523 FBtr0091476 CG33523 protein_coding CG8478-S2-modencode_R1_peak_826 chrX 14734020 14734218 + 32 NA promoter-TSS (FBgn0052590) protein_coding-promoter-TSS (FBgn0052590) 712 FBgn0264078 FBgn0264078 FBtr0300435 Flo-2 protein_coding CG8478-S2-modencode_R1_peak_33 chr2L 5293040 5293150 + 32 NA Intergenic Intergenic -12627 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_485 chr3R 5634569 5634794 + 32 NA exon (FBgn0037760, exon 1 of 4) protein_coding-exon (FBgn0037760, exon 1 of 4) 404 FBgn0037760 FBgn0037760 FBtr0082155 FBX011 protein_coding CG8478-S2-modencode_R1_peak_562 chr3R 16607572 16607749 + 32 NA intron (FBgn0038826, intron 1 of 10) protein_coding-intron (FBgn0038826, intron 2 of 11) -9337 FBgn0046689 FBgn0046689 FBtr0083996 Takl1 protein_coding CG8478-S2-modencode_R1_peak_340 chr3L 6957225 6957375 + 32 NA intron (FBgn0261445, intron 1 of 2) protein_coding-intron (FBgn0261445, intron 1 of 2) 558 FBgn0261445 FBgn0261445 FBtr0076938 sgl protein_coding CG8478-S2-modencode_R1_peak_410 chr3L 18019256 18019378 + 32 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -14100 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding CG8478-S2-modencode_R1_peak_304 chr3L 548358 548501 + 31 NA intron (FBgn0035142, intron 2 of 10) protein_coding-intron (FBgn0035142, intron 2 of 10) -5498 FBgn0035141 FBgn0035141 FBtr0072564 Cypl protein_coding CG8478-S2-modencode_R1_peak_367 chr3L 11003376 11003597 + 31 NA Intergenic Intergenic -1553 FBgn0013469 FBgn0013469 FBtr0330080 klu protein_coding CG8478-S2-modencode_R1_peak_685 chrX 3056243 3056331 + 31 NA intron (FBgn0004647, intron 5 of 8) protein_coding-intron (FBgn0004647, intron 5 of 8) 10886 FBgn0028746 FBgn0028746 FBtr0070543 CG18508 protein_coding CG8478-S2-modencode_R1_peak_138 chr2R 5579549 5579644 + 31 NA intron (FBgn0023143, intron 1 of 3) protein_coding-intron (FBgn0023143, intron 1 of 3) 1237 FBgn0023143 FBgn0023143 FBtr0310357 Uba1 protein_coding CG8478-S2-modencode_R1_peak_759 chrX 9473016 9473194 + 31 NA intron (FBgn0052699, intron 1 of 7) protein_coding-intron (FBgn0052699, intron 1 of 6) 903 FBgn0052699 FBgn0052699 FBtr0071369 CG32699 protein_coding CG8478-S2-modencode_R1_peak_505 chr3R 8251756 8251896 + 31 NA promoter-TSS (FBgn0038045) protein_coding-promoter-TSS (FBgn0038045) -187 FBgn0004103 FBgn0004103 FBtr0082595 Pp1-87B protein_coding CG8478-S2-modencode_R1_peak_698 chrX 3635110 3635234 + 31 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -21507 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_276 chr2R 16886001 16886519 + 31 NA intron (FBgn0034570, intron 1 of 6) protein_coding-intron (FBgn0034570, intron 1 of 6) 2535 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding CG8478-S2-modencode_R1_peak_451 chr3R 2508969 2509096 + 31 NA Intergenic Intergenic -1140 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding CG8478-S2-modencode_R1_peak_370 chr3L 11358340 11358510 + 31 NA promoter-TSS (FBgn0036155) protein_coding-promoter-TSS (FBgn0036155) -440 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding CG8478-S2-modencode_R1_peak_696 chrX 3612660 3612779 + 31 NA intron (FBgn0015286, intron 1 of 6) protein_coding-intron (FBgn0015286, intron 1 of 4) 946 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_142 chr2R 5817158 5817253 + 31 NA promoter-TSS (FBgn0011656) protein_coding-promoter-TSS (FBgn0011656) 18807 FBgn0033465 FBgn0033465 FBtr0308338 CG12140 protein_coding CG8478-S2-modencode_R1_peak_313 chr3L 633177 633296 + 31 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 4766 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_545 chr3R 12942588 12942679 + 31 NA intron (FBgn0014141, intron 3 of 17) protein_coding-intron (FBgn0014141, intron 2 of 15) -3568 FBgn0085307 FBgn0085307 FBtr0112473 CG34278 protein_coding CG8478-S2-modencode_R1_peak_202 chr2R 8878769 8878857 + 31 NA Intergenic Intergenic -2589 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding CG8478-S2-modencode_R1_peak_673 chrX 548430 548545 + 30 NA intron (FBgn0025639, intron 1 of 2) protein_coding-intron (FBgn0025639, intron 1 of 2) 484 FBgn0025639 FBgn0025639 FBtr0308652 Hmt4-20 protein_coding CG8478-S2-modencode_R1_peak_116 chr2R 2520103 2520269 + 30 NA promoter-TSS (FBgn0262736) protein_coding-promoter-TSS (FBgn0262736) -300 FBgn0262736 FBgn0262736 FBtr0086153 Vha16-1 protein_coding CG8478-S2-modencode_R1_peak_227 chr2R 12467195 12467322 + 30 NA promoter-TSS (FBgn0016131) protein_coding-promoter-TSS (FBgn0016131) -371 FBgn0016131 FBgn0016131 FBtr0087104 Cdk4 protein_coding CG8478-S2-modencode_R1_peak_790 chrX 10429740 10429840 + 30 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 30834 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_760 chrX 9478488 9478604 + 30 NA Intergenic Intergenic -1377 FBgn0001186 FBgn0001186 FBtr0071362 Hex-A protein_coding CG8478-S2-modencode_R1_peak_163 chr2R 6505934 6506032 + 30 NA intron (FBgn0033538, intron 1 of 9) protein_coding-intron (FBgn0033538, intron 1 of 8) -3725 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_342 chr3L 7363455 7363610 + 30 NA promoter-TSS (FBgn0082598) protein_coding-promoter-TSS (FBgn0082598) -368 FBgn0082598 FBgn0082598 FBtr0332730 akirin protein_coding CG8478-S2-modencode_R1_peak_245 chr2R 13709873 13710228 + 30 NA intron (FBgn0259211, intron 3 of 13) protein_coding-intron (FBgn0259211, intron 3 of 12) -1020 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding CG8478-S2-modencode_R1_peak_335 chr3L 5763586 5763769 + 30 NA promoter-TSS (FBgn0260936) protein_coding-promoter-TSS (FBgn0260936) -588 FBgn0260936 FBgn0260936 FBtr0330127 scny protein_coding CG8478-S2-modencode_R1_peak_371 chr3L 11527772 11527940 + 30 NA promoter-TSS (FBgn0259481) protein_coding-promoter-TSS (FBgn0259481) -278 FBgn0259481 FBgn0259481 FBtr0333217 Mob2 protein_coding CG8478-S2-modencode_R1_peak_515 chr3R 8838848 8839003 + 30 NA intron (FBgn0020496, intron 1 of 5) protein_coding-intron (FBgn0020496, intron 1 of 5) 1537 FBgn0020496 FBgn0020496 FBtr0082702 CtBP protein_coding CG8478-S2-modencode_R1_peak_101 chr2L 21560287 21560414 + 30 NA Intergenic Intergenic -13039 FBgn0032949 FBgn0032949 FBtr0085896 Lamp1 protein_coding CG8478-S2-modencode_R1_peak_48 chr2L 7424897 7425010 + 30 NA promoter-TSS (FBgn0262453) pre_miRNA-promoter-TSS (FBgn0262453) -900 FBgn0262453 FBgn0262453 FBtr0304473 mir-275 pre_miRNA CG8478-S2-modencode_R1_peak_218 chr2R 10368953 10369119 + 30 NA exon (FBgn0001332, exon 1 of 4) protein_coding-exon (FBgn0001332, exon 1 of 4) 320 FBgn0001332 FBgn0001332 FBtr0087492 L protein_coding CG8478-S2-modencode_R1_peak_104 chr2L 21828198 21828447 + 30 NA promoter-TSS (FBgn0003866) protein_coding-promoter-TSS (FBgn0003866) -271 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding CG8478-S2-modencode_R1_peak_616 chr3R 23070421 23070516 + 29 NA promoter-TSS (FBgn0042111) protein_coding-promoter-TSS (FBgn0042111) 72 FBgn0042111 FBgn0042111 FBtr0333327 CG18766 protein_coding CG8478-S2-modencode_R1_peak_808 chrX 12618555 12618656 + 29 NA intron (FBgn0264678, intron 1 of 1) protein_coding-intron (FBgn0263865, intron 2 of 9) -6112 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA CG8478-S2-modencode_R1_peak_347 chr3L 8021198 8021286 + 29 NA TTS (FBgn0052370) tRNA-TTS (FBgn0052370) 476 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA CG8478-S2-modencode_R1_peak_355 chr3L 10318065 10318537 + 29 NA Intergenic Intergenic 5355 FBgn0262381 FBgn0262381 FBtr0304227 mir-276b pre_miRNA CG8478-S2-modencode_R1_peak_210 chr2R 9883084 9883230 + 29 NA intron (FBgn0002643, intron 2 of 6) protein_coding-intron (FBgn0002643, intron 2 of 6) -4942 FBgn0020620 FBgn0020620 FBtr0087604 RN-tre protein_coding CG8478-S2-modencode_R1_peak_392 chr3L 15820148 15820241 + 29 NA promoter-TSS (FBgn0036534) protein_coding-promoter-TSS (FBgn0036534) 206 FBgn0040230 FBgn0040230 FBtr0332133 dbo protein_coding CG8478-S2-modencode_R1_peak_236 chr2R 13028032 13028167 + 29 NA promoter-TSS (FBgn0262563) protein_coding-promoter-TSS (FBgn0262563) 285 FBgn0262567 FBgn0262567 FBtr0304890 CG43107 protein_coding CG8478-S2-modencode_R1_peak_361 chr3L 10843347 10843436 + 29 NA Intergenic Intergenic -8113 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_695 chrX 3589157 3589247 + 29 NA intron (FBgn0023215, intron 2 of 7) protein_coding-intron (FBgn0023215, intron 2 of 7) 5804 FBgn0023215 FBgn0023215 FBtr0301825 Mnt protein_coding CG8478-S2-modencode_R1_peak_272 chr2R 16719310 16719531 + 29 NA exon (FBgn0016984, exon 1 of 2) protein_coding-exon (FBgn0016984, exon 1 of 2) 499 FBgn0016984 FBgn0016984 FBtr0071563 sktl protein_coding CG8478-S2-modencode_R1_peak_384 chr3L 13996521 13996694 + 29 NA intron (FBgn0036398, intron 2 of 7) protein_coding-intron (FBgn0036398, intron 2 of 7) 1380 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding CG8478-S2-modencode_R1_peak_255 chr2R 14539622 14539752 + 29 NA intron (FBgn0034371, intron 1 of 5) protein_coding-intron (FBgn0034371, intron 1 of 6) 592 FBgn0034371 FBgn0034371 FBtr0086658 SP2637 protein_coding CG8478-S2-modencode_R1_peak_251 chr2R 14287301 14287457 + 29 NA promoter-TSS (FBgn0063497) protein_coding-promoter-TSS (FBgn0063497) 381 FBgn0063498 FBgn0063498 FBtr0086670 GstE2 protein_coding CG8478-S2-modencode_R1_peak_221 chr2R 10678206 10678300 + 29 NA intron (FBgn0001319, intron 3 of 10) protein_coding-intron (FBgn0001319, intron 3 of 10) 6279 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding CG8478-S2-modencode_R1_peak_223 chr2R 11748695 11748802 + 29 NA exon (FBgn0022160, exon 1 of 8) protein_coding-exon (FBgn0022160, exon 1 of 8) 101 FBgn0022160 FBgn0022160 FBtr0112900 Gpo-1 protein_coding CG8478-S2-modencode_R1_peak_129 chr2R 3955977 3956086 + 28 NA promoter-TSS (FBgn0040778) protein_coding-promoter-TSS (FBgn0040778) 571 FBgn0020279 FBgn0020279 FBtr0100575 lig protein_coding CG8478-S2-modencode_R1_peak_254 chr2R 14498165 14498312 + 28 NA TTS (FBgn0261587) protein_coding-TTS (FBgn0261587) 1022 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding CG8478-S2-modencode_R1_peak_169 chr2R 6976806 6976984 + 28 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -2751 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_852 chrX 19531739 19531888 + 28 NA exon (FBgn0087008, exon 1 of 12) protein_coding-exon (FBgn0087008, exon 1 of 12) 572 FBgn0087008 FBgn0087008 FBtr0074762 e(y)3 protein_coding CG8478-S2-modencode_R1_peak_646 chr4 77000 77143 + 28 NA promoter-TSS (FBgn0004859) protein_coding-promoter-TSS (FBgn0004859) -52 FBgn0264617 FBgn0264617 FBtr0333704 CR43957 ncRNA CG8478-S2-modencode_R1_peak_609 chr3R 21943477 21943610 + 28 NA intron (FBgn0051324, intron 3 of 4) protein_coding-intron (FBgn0051324, intron 1 of 2) -8838 FBgn0039413 FBgn0039413 FBtr0273389 CG14556 protein_coding CG8478-S2-modencode_R1_peak_588 chr3R 19857146 19857234 + 28 NA promoter-TSS (FBgn0020647) protein_coding-promoter-TSS (FBgn0020647) -724 FBgn0039139 FBgn0039139 FBtr0084532 Ime4 protein_coding CG8478-S2-modencode_R1_peak_80 chr2L 12495374 12495527 + 28 NA intron (FBgn0259176, intron 5 of 6) protein_coding-intron (FBgn0259176, intron 6 of 7) 1883 FBgn0051858 FBgn0051858 FBtr0080381 t-cup protein_coding CG8478-S2-modencode_R1_peak_535 chr3R 12106911 12107081 + 28 NA intron (FBgn0250823, intron 1 of 11) protein_coding-intron (FBgn0250823, intron 2 of 11) 8820 FBgn0250823 FBgn0250823 FBtr0100332 gish protein_coding CG8478-S2-modencode_R1_peak_744 chrX 7861297 7861391 + 28 NA intron (FBgn0003656, intron 1 of 10) protein_coding-intron (FBgn0003656, intron 1 of 10) 925 FBgn0003656 FBgn0003656 FBtr0071126 sws protein_coding CG8478-S2-modencode_R1_peak_863 chrX 20282816 20282904 + 28 NA TTS (FBgn0031108) protein_coding-TTS (FBgn0031108) 1775 FBgn0031108 FBgn0031108 FBtr0077329 CG15459 protein_coding CG8478-S2-modencode_R1_peak_184 chr2R 7501925 7502077 + 28 NA intron (FBgn0033636, intron 1 of 16) protein_coding-intron (FBgn0033636, intron 1 of 16) -1699 FBgn0264508 FBgn0264508 FBtr0333069 CR43907 ncRNA CG8478-S2-modencode_R1_peak_288 chr2R 18205653 18205753 + 28 NA intron (FBgn0013272, intron 1 of 4) protein_coding-intron (FBgn0013272, intron 2 of 5) -4705 FBgn0013272 FBgn0013272 FBtr0071816 Gp150 protein_coding CG8478-S2-modencode_R1_peak_509 chr3R 8543010 8543210 + 28 NA intron (FBgn0002719, intron 1 of 2) protein_coding-intron (FBgn0002719, intron 2 of 3) 2404 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_301 chr2RHet 370122 370251 + 28 NA NA NA NA NA CG8478-S2-modencode_R1_peak_576 chr3R 18983071 18983191 + 28 NA TTS (FBgn0039058) protein_coding-TTS (FBgn0039058) 461 FBgn0004395 FBgn0004395 FBtr0084403 unk protein_coding CG8478-S2-modencode_R1_peak_787 chrX 10427505 10427867 + 28 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 32938 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_726 chrX 6267089 6267244 + 28 NA promoter-TSS (FBgn0003139) protein_coding-promoter-TSS (FBgn0003139) -218 FBgn0003139 FBgn0003139 FBtr0331432 PpV protein_coding CG8478-S2-modencode_R1_peak_290 chr2R 18441891 18441989 + 27 NA intron (FBgn0003175, intron 3 of 14) protein_coding-intron (FBgn0003175, intron 3 of 13) 4341 FBgn0034736 FBgn0034736 FBtr0071835 CG6018 protein_coding CG8478-S2-modencode_R1_peak_693 chrX 3337536 3337662 + 27 NA intron (FBgn0029657, intron 3 of 6) protein_coding-intron (FBgn0029657, intron 1 of 3) -3420 FBgn0029657 FBgn0029657 FBtr0332304 CG12535 protein_coding CG8478-S2-modencode_R1_peak_697 chrX 3634882 3634970 + 27 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -21261 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_25 chr2L 4371735 4371856 + 27 NA promoter-TSS (FBgn0026319) protein_coding-promoter-TSS (FBgn0026319) -6745 FBgn0026319 FBgn0026319 FBtr0290244 Traf4 protein_coding CG8478-S2-modencode_R1_peak_171 chr2R 6978399 6978487 + 27 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -4299 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_277 chr2R 16886997 16887088 + 27 NA promoter-TSS (FBgn0034570) protein_coding-promoter-TSS (FBgn0034570) 3317 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding CG8478-S2-modencode_R1_peak_762 chrX 9560390 9560511 + 27 NA exon (FBgn0261617, exon 14 of 14) protein_coding-exon (FBgn0261617, exon 14 of 14) -3659 FBgn0030148 FBgn0030148 FBtr0071403 CG3106 protein_coding CG8478-S2-modencode_R1_peak_593 chr3R 20398534 20398658 + 27 NA promoter-TSS (FBgn0039209) protein_coding-promoter-TSS (FBgn0039209) 4579 FBgn0039209 FBgn0039209 FBtr0084675 CG13624 protein_coding CG8478-S2-modencode_R1_peak_320 chr3L 1034245 1034388 + 27 NA promoter-TSS (FBgn0035181) protein_coding-promoter-TSS (FBgn0035181) -869 FBgn0035181 FBgn0035181 FBtr0072622 CG9205 protein_coding CG8478-S2-modencode_R1_peak_634 chr3R 26163598 26163787 + 27 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) -31333 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_395 chr3L 16608545 16608638 + 27 NA promoter-TSS (FBgn0017572) protein_coding-promoter-TSS (FBgn0017572) -19 FBgn0017572 FBgn0017572 FBtr0331560 Mo25 protein_coding CG8478-S2-modencode_R1_peak_77 chr2L 12366063 12366153 + 27 NA promoter-TSS (FBgn0262475) protein_coding-promoter-TSS (FBgn0262475) 9667 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding CG8478-S2-modencode_R1_peak_699 chrX 3636889 3636977 + 27 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -23268 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_647 chr4 522171 522259 + 27 NA promoter-TSS (FBgn0004607) protein_coding-promoter-TSS (FBgn0004607) -221 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding CG8478-S2-modencode_R1_peak_400 chr3L 17550460 17550563 + 27 NA exon (FBgn0025455, exon 1 of 4) protein_coding-exon (FBgn0025455, exon 1 of 4) 377 FBgn0025455 FBgn0025455 FBtr0075206 CycT protein_coding CG8478-S2-modencode_R1_peak_244 chr2R 13676685 13676774 + 27 NA promoter-TSS (FBgn0028744) protein_coding-promoter-TSS (FBgn0028744) 185 FBgn0026316 FBgn0026316 FBtr0089553 UbcD10 protein_coding CG8478-S2-modencode_R1_peak_773 chrX 10105936 10106067 + 27 NA intron (FBgn0030183, intron 1 of 1) protein_coding-intron (FBgn0030183, intron 1 of 2) -1002 FBgn0028342 FBgn0028342 FBtr0071438 l(1)G0230 protein_coding CG8478-S2-modencode_R1_peak_431 chr3L 22941634 22941736 + 26 NA intron (FBgn0037207, intron 2 of 2) protein_coding-intron (FBgn0037207, intron 2 of 2) 2590 FBgn0037207 FBgn0037207 FBtr0078563 Mes2 protein_coding CG8478-S2-modencode_R1_peak_739 chrX 7603003 7603099 + 26 NA TTS (FBgn0262979) protein_coding-TTS (FBgn0262979) 1243 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_861 chrX 20102866 20102990 + 26 NA intron (FBgn0003654, intron 4 of 6) protein_coding-intron (FBgn0003654, intron 5 of 7) 4528 FBgn0003654 FBgn0003654 FBtr0089409 sw protein_coding CG8478-S2-modencode_R1_peak_476 chr3R 5052616 5052736 + 26 NA promoter-TSS (FBgn0003165) protein_coding-promoter-TSS (FBgn0003165) 13313 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_186 chr2R 7521065 7521180 + 26 NA intron (FBgn0033638, intron 1 of 7) protein_coding-intron (FBgn0033638, intron 1 of 7) 7296 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding CG8478-S2-modencode_R1_peak_393 chr3L 16152670 16152758 + 26 NA intron (FBgn0036576, intron 1 of 4) protein_coding-intron (FBgn0036576, intron 1 of 4) 5087 FBgn0036576 FBgn0036576 FBtr0307519 CG5151 protein_coding CG8478-S2-modencode_R1_peak_681 chrX 1964340 1964504 + 26 NA TTS (FBgn0025627) protein_coding-TTS (FBgn0025627) 1795 FBgn0025627 FBgn0025627 FBtr0070328 CG4194 protein_coding CG8478-S2-modencode_R1_peak_463 chr3R 3945563 3945673 + 26 NA intron (FBgn0243512, intron 3 of 3) protein_coding-intron (FBgn0243512, intron 3 of 3) -2803 FBgn0037549 FBgn0037549 FBtr0113205 CG7878 protein_coding CG8478-S2-modencode_R1_peak_125 chr2R 3633029 3633127 + 26 NA promoter-TSS (FBgn0050497) protein_coding-promoter-TSS (FBgn0050497) -276 FBgn0050497 FBgn0050497 FBtr0088932 CG30497 protein_coding CG8478-S2-modencode_R1_peak_610 chr3R 22054870 22054980 + 26 NA Intergenic Intergenic -1049 FBgn0039419 FBgn0039419 FBtr0084990 CG12290 protein_coding CG8478-S2-modencode_R1_peak_170 chr2R 6977239 6977364 + 26 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -3157 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_581 chr3R 19151706 19151914 + 26 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 20074 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_738 chrX 7599853 7600107 + 26 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) -1828 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_584 chr3R 19162236 19162343 + 25 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 9595 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_229 chr2R 12471488 12471614 + 25 NA intron (FBgn0016131, intron 3 of 6) protein_coding-intron (FBgn0016131, intron 3 of 6) -2048 FBgn0003274 FBgn0003274 FBtr0087105 RpLP2 protein_coding CG8478-S2-modencode_R1_peak_215 chr2R 10022581 10022673 + 25 NA intron (FBgn0040752, intron 1 of 11) protein_coding-intron (FBgn0040752, intron 1 of 11) 5776 FBgn0040752 FBgn0040752 FBtr0087601 Prosap protein_coding CG8478-S2-modencode_R1_peak_527 chr3R 11068950 11069039 + 25 NA promoter-TSS (FBgn0001219) protein_coding-promoter-TSS (FBgn0001219) -947 FBgn0001219 FBgn0001219 FBtr0083056 Hsc70-4 protein_coding CG8478-S2-modencode_R1_peak_100 chr2L 21397306 21397524 + 25 NA Intergenic Intergenic -6700 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene CG8478-S2-modencode_R1_peak_300 chr2R 21102809 21102944 + 25 NA intron (FBgn0035094, intron 2 of 8) protein_coding-intron (FBgn0035094, intron 2 of 8) -11258 FBgn0001325 FBgn0001325 FBtr0072449 Kr protein_coding CG8478-S2-modencode_R1_peak_189 chr2R 8060386 8060574 + 25 NA intron (FBgn0014184, intron 1 of 2) protein_coding-intron (FBgn0014184, intron 1 of 2) -2121 FBgn0010621 FBgn0010621 FBtr0087988 Cct5 protein_coding CG8478-S2-modencode_R1_peak_182 chr2R 7490500 7490681 + 25 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 1851 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding CG8478-S2-modencode_R1_peak_471 chr3R 4636296 4636498 + 25 NA promoter-TSS (FBgn0037635) protein_coding-promoter-TSS (FBgn0037635) -864 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding CG8478-S2-modencode_R1_peak_188 chr2R 7932292 7932410 + 25 NA exon (FBgn0024732, exon 1 of 4) protein_coding-exon (FBgn0024732, exon 1 of 4) 230 FBgn0024732 FBgn0024732 FBtr0330629 Drep-1 protein_coding CG8478-S2-modencode_R1_peak_212 chr2R 9895897 9896069 + 24 NA promoter-TSS (FBgn0002643) protein_coding-promoter-TSS (FBgn0002643) -2497 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA CG8478-S2-modencode_R1_peak_234 chr2R 12915470 12915617 + 24 NA intron (FBgn0023172, intron 1 of 23) protein_coding-intron (FBgn0023172, intron 1 of 22) 797 FBgn0023172 FBgn0023172 FBtr0305083 RhoGEF2 protein_coding CG8478-S2-modencode_R1_peak_796 chrX 10678717 10679037 + 24 NA promoter-TSS (FBgn0003360) protein_coding-promoter-TSS (FBgn0003360) -386 FBgn0003360 FBgn0003360 FBtr0073423 sesB protein_coding CG8478-S2-modencode_R1_peak_6 chr2L 249128 249251 + 24 NA intron (FBgn0086902, intron 1 of 16) protein_coding-intron (FBgn0086902, intron 1 of 17) 1634 FBgn0086902 FBgn0086902 FBtr0078145 kis protein_coding CG8478-S2-modencode_R1_peak_813 chrX 12645223 12645322 + 24 NA Intergenic Intergenic 4922 FBgn0030418 FBgn0030418 FBtr0333722 CG4004 protein_coding CG8478-S2-modencode_R1_peak_324 chr3L 2867154 2867272 + 24 NA intron (FBgn0263392, intron 3 of 10) protein_coding-intron (FBgn0263392, intron 3 of 9) 11945 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding CG8478-S2-modencode_R1_peak_443 chr3R 1090455 1090553 + 24 NA promoter-TSS (FBgn0264652) protein_coding-promoter-TSS (FBgn0264652) -162 FBgn0264652 FBgn0264652 FBtr0078782 Hph protein_coding CG8478-S2-modencode_R1_peak_81 chr2L 12546136 12546253 + 24 NA exon (FBgn0259176, exon 1 of 7) protein_coding-exon (FBgn0259176, exon 1 of 7) 3018 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA CG8478-S2-modencode_R1_peak_572 chr3R 17700848 17701028 + 24 NA promoter-TSS (FBgn0038912) protein_coding-promoter-TSS (FBgn0038912) -77 FBgn0038912 FBgn0038912 FBtr0300077 CG6656 protein_coding CG8478-S2-modencode_R1_peak_141 chr2R 5761828 5761942 + 24 NA promoter-TSS (FBgn0033459) protein_coding-promoter-TSS (FBgn0033459) -965 FBgn0033459 FBgn0033459 FBtr0088378 CG12744 protein_coding CG8478-S2-modencode_R1_peak_601 chr3R 21831744 21831949 + 24 NA promoter-TSS (FBgn0002733) protein_coding-promoter-TSS (FBgn0002733) -101 FBgn0002733 FBgn0002733 FBtr0084982 HLHmbeta protein_coding CG8478-S2-modencode_R1_peak_164 chr2R 6754849 6754947 + 24 NA intron (FBgn0050015, intron 1 of 7) protein_coding-intron (FBgn0050015, intron 1 of 7) 7999 FBgn0050016 FBgn0050016 FBtr0088241 CG30016 protein_coding CG8478-S2-modencode_R1_peak_751 chrX 8699998 8700108 + 24 NA promoter-TSS (FBgn0026411) protein_coding-promoter-TSS (FBgn0026411) -20667 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding CG8478-S2-modencode_R1_peak_756 chrX 9238453 9238639 + 24 NA intron (FBgn0085478, intron 2 of 10) protein_coding-intron (FBgn0085478, intron 2 of 10) 11714 FBgn0085478 FBgn0085478 FBtr0112755 CG34449 protein_coding CG8478-S2-modencode_R1_peak_776 chrX 10224182 10224270 + 23 NA promoter-TSS (FBgn0011770) protein_coding-promoter-TSS (FBgn0011770) -344 FBgn0011770 FBgn0011770 FBtr0071472 Gip protein_coding CG8478-S2-modencode_R1_peak_345 chr3L 7860161 7860279 + 23 NA intron (FBgn0016694, intron 1 of 5) protein_coding-intron (FBgn0016694, intron 1 of 4) 249 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding CG8478-S2-modencode_R1_peak_35 chr2L 5299131 5299258 + 23 NA promoter-TSS (FBgn0016076) protein_coding-promoter-TSS (FBgn0016076) -6528 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_621 chr3R 24156515 24156700 + 23 NA exon (FBgn0261618, exon 1 of 6) protein_coding-exon (FBgn0261618, exon 1 of 6) 4656 FBgn0261618 FBgn0261618 FBtr0301181 larp protein_coding CG8478-S2-modencode_R1_peak_297 chr2R 19759819 19759990 + 23 NA intron (FBgn0011236, intron 1 of 2) protein_coding-intron (FBgn0011236, intron 1 of 2) 2108 FBgn0011236 FBgn0011236 FBtr0072129 ken protein_coding CG8478-S2-modencode_R1_peak_827 chrX 14916917 14917121 + 23 NA intron (FBgn0030600, intron 13 of 22) protein_coding-intron (FBgn0030600, intron 13 of 22) -1448 FBgn0052594 FBgn0052594 FBtr0310270 be protein_coding CG8478-S2-modencode_R1_peak_241 chr2R 13604004 13604106 + 23 NA promoter-TSS (FBgn0028494) protein_coding-promoter-TSS (FBgn0028494) -5789 FBgn0034263 FBgn0034263 FBtr0086859 CG10934 protein_coding CG8478-S2-modencode_R1_peak_175 chr2R 7084800 7084976 + 23 NA promoter-TSS (FBgn0003396) protein_coding-promoter-TSS (FBgn0003396) 21881 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding CG8478-S2-modencode_R1_peak_849 chrX 19472387 19472529 + 23 NA intron (FBgn0031030, intron 1 of 12) protein_coding-intron (FBgn0031030, intron 1 of 12) 1315 FBgn0031030 FBgn0031030 FBtr0309237 Tao protein_coding CG8478-S2-modencode_R1_peak_56 chr2L 8100897 8100985 + 23 NA intron (FBgn0261822, intron 2 of 7) protein_coding-intron (FBgn0261822, intron 2 of 6) 12637 FBgn0261822 FBgn0261822 FBtr0079573 Bsg protein_coding CG8478-S2-modencode_R1_peak_650 chr4 1270838 1271036 + 23 NA intron (FBgn0053653, intron 21 of 22) protein_coding-intron (FBgn0053653, intron 22 of 23) 36374 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_846 chrX 19054559 19054647 + 23 NA intron (FBgn0261461, intron 2 of 5) protein_coding-intron (FBgn0261461, intron 1 of 4) 8652 FBgn0263571 FBgn0263571 FBtr0309726 mir-4959 pre_miRNA CG8478-S2-modencode_R1_peak_575 chr3R 18223130 18223242 + 23 NA promoter-TSS (FBgn0051166) tRNA-promoter-TSS (FBgn0051166) -108 FBgn0051166 FBgn0051166 FBtr0084223 tRNA:CR31166 tRNA CG8478-S2-modencode_R1_peak_160 chr2R 6489809 6489961 + 23 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) -19823 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_322 chr3L 1368078 1368166 + 23 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -2506 FBgn0003295 FBgn0003295 FBtr0072681 ru protein_coding CG8478-S2-modencode_R1_peak_625 chr3R 25081223 25081430 + 23 NA exon (FBgn0003525, exon 1 of 2) protein_coding-exon (FBgn0003525, exon 1 of 2) 176 FBgn0003525 FBgn0003525 FBtr0085397 stg protein_coding CG8478-S2-modencode_R1_peak_66 chr2L 9698831 9698962 + 23 NA promoter-TSS (FBgn0015393) protein_coding-promoter-TSS (FBgn0015393) 397 FBgn0000273 FBgn0000273 FBtr0079852 Pka-C1 protein_coding CG8478-S2-modencode_R1_peak_430 chr3L 22828535 22828684 + 22 NA promoter-TSS (FBgn0027339) protein_coding-promoter-TSS (FBgn0027339) -1559 FBgn0037195 FBgn0037195 FBtr0078546 CG11226 protein_coding CG8478-S2-modencode_R1_peak_387 chr3L 14194209 14194359 + 22 NA intron (FBgn0013718, intron 4 of 10) protein_coding-intron (FBgn0013718, intron 4 of 9) -2139 FBgn0052141 FBgn0052141 FBtr0075735 CG32141 protein_coding CG8478-S2-modencode_R1_peak_596 chr3R 20906197 20906427 + 22 NA Intergenic Intergenic -2962 FBgn0004897 FBgn0004897 FBtr0084770 fd96Ca protein_coding CG8478-S2-modencode_R1_peak_506 chr3R 8268542 8268963 + 22 NA promoter-TSS (FBgn0086687) protein_coding-promoter-TSS (FBgn0086687) -1011 FBgn0086687 FBgn0086687 FBtr0082630 desat1 protein_coding CG8478-S2-modencode_R1_peak_92 chr2L 17472651 17472753 + 22 NA promoter-TSS (FBgn0032640) protein_coding-promoter-TSS (FBgn0032640) 513 FBgn0000183 FBgn0000183 FBtr0305688 BicD protein_coding CG8478-S2-modencode_R1_peak_413 chr3L 18180985 18181073 + 22 NA Intergenic Intergenic -2288 FBgn0003997 FBgn0003997 FBtr0332862 W protein_coding CG8478-S2-modencode_R1_peak_577 chr3R 19017091 19017221 + 22 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) 12600 FBgn0011596 FBgn0011596 FBtr0084399 fzo protein_coding CG8478-S2-modencode_R1_peak_292 chr2R 18821796 18821892 + 22 NA promoter-TSS (FBgn0034800) protein_coding-promoter-TSS (FBgn0034800) -244 FBgn0034800 FBgn0034800 FBtr0071995 CG3788 protein_coding CG8478-S2-modencode_R1_peak_263 chr2R 15180654 15180963 + 22 NA intron (FBgn0086358, intron 1 of 5) protein_coding-intron (FBgn0086358, intron 1 of 3) 774 FBgn0086358 FBgn0086358 FBtr0305333 Tab2 protein_coding CG8478-S2-modencode_R1_peak_483 chr3R 5399417 5399549 + 22 NA promoter-TSS (FBgn0037715) protein_coding-promoter-TSS (FBgn0037715) 444 FBgn0037715 FBgn0037715 FBtr0082109 CG9399 protein_coding CG8478-S2-modencode_R1_peak_836 chrX 16502053 16502193 + 21 NA intron (FBgn0061200, intron 6 of 6) protein_coding-intron (FBgn0061200, intron 7 of 7) 1929 FBgn0263538 FBgn0263538 FBtr0309639 mir-4965 pre_miRNA CG8478-S2-modencode_R1_peak_246 chr2R 13756816 13756916 + 21 NA intron (FBgn0034282, intron 2 of 6) protein_coding-intron (FBgn0034282, intron 3 of 6) 2649 FBgn0034282 FBgn0034282 FBtr0113091 Mapmodulin protein_coding CG8478-S2-modencode_R1_peak_390 chr3L 15100239 15100340 + 21 NA TTS (FBgn0264702) ncRNA-TTS (FBgn0264702) 1307 FBgn0262707 FBgn0262707 FBtr0075635 CTPsyn protein_coding CG8478-S2-modencode_R1_peak_667 chrUextra 10241480 10241592 + 21 NA NA NA NA NA CG8478-S2-modencode_R1_peak_79 chr2L 12475517 12475605 + 21 NA intron (FBgn0259176, intron 2 of 2) protein_coding-intron (FBgn0259176, intron 2 of 2) -15471 FBgn0262203 FBgn0262203 FBtr0304239 mir-967 pre_miRNA CG8478-S2-modencode_R1_peak_449 chr3R 2236036 2236189 + 21 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 3533 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding CG8478-S2-modencode_R1_peak_422 chr3L 19071453 19071572 + 21 NA intron (FBgn0036844, intron 1 of 4) protein_coding-intron (FBgn0036844, intron 1 of 4) 8014 FBgn0036844 FBgn0036844 FBtr0075035 Mkp3 protein_coding CG8478-S2-modencode_R1_peak_196 chr2R 8804250 8804363 + 20 NA intron (FBgn0010488, intron 1 of 3) protein_coding-intron (FBgn0010488, intron 1 of 3) 804 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding CG8478-S2-modencode_R1_peak_774 chrX 10159835 10159990 + 20 NA promoter-TSS (FBgn0040942) protein_coding-promoter-TSS (FBgn0040942) -616 FBgn0040942 FBgn0040942 FBtr0071481 CG12643 protein_coding CG8478-S2-modencode_R1_peak_525 chr3R 10566222 10566420 + 20 NA promoter-TSS (FBgn0263929) protein_coding-promoter-TSS (FBgn0263929) 165 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding CG8478-S2-modencode_R1_peak_867 chrX 21465204 21465292 + 20 NA Intergenic Intergenic 10468 FBgn0027588 FBgn0027588 FBtr0070062 CG14476 protein_coding CG8478-S2-modencode_R1_peak_569 chr3R 17415751 17415894 + 20 NA promoter-TSS (FBgn0013984) protein_coding-promoter-TSS (FBgn0013984) 91 FBgn0013984 FBgn0013984 FBtr0290232 InR protein_coding CG8478-S2-modencode_R1_peak_554 chr3R 14744132 14744325 + 20 NA promoter-TSS (FBgn0261113) protein_coding-promoter-TSS (FBgn0261113) 17 FBgn0261113 FBgn0261113 FBtr0083703 Xrp1 protein_coding CG8478-S2-modencode_R1_peak_67 chr2L 10972452 10972552 + 20 NA promoter-TSS (FBgn0032322) protein_coding-promoter-TSS (FBgn0032322) 222 FBgn0032322 FBgn0032322 FBtr0080147 CG16743 protein_coding CG8478-S2-modencode_R1_peak_312 chr3L 629990 630137 + 20 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 1593 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_295 chr2R 19601080 19601227 + 20 NA promoter-TSS (FBgn0034897) protein_coding-promoter-TSS (FBgn0034897) -272 FBgn0034897 FBgn0034897 FBtr0113114 Sesn protein_coding CG8478-S2-modencode_R1_peak_144 chr2R 5988253 5988420 + 20 NA promoter-TSS (FBgn0004907) protein_coding-promoter-TSS (FBgn0004907) -1245 FBgn0033485 FBgn0033485 FBtr0088425 RpLP0-like protein_coding CG8478-S2-modencode_R1_peak_187 chr2R 7527031 7527126 + 20 NA intron (FBgn0033638, intron 1 of 7) protein_coding-intron (FBgn0033638, intron 1 of 7) 1340 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding CG8478-S2-modencode_R1_peak_121 chr2R 3495396 3495579 + 20 NA intron (FBgn0033196, intron 2 of 10) protein_coding-intron (FBgn0033196, intron 2 of 10) 12729 FBgn0033196 FBgn0033196 FBtr0088950 CG1358 protein_coding CG8478-S2-modencode_R1_peak_344 chr3L 7849545 7849633 + 20 NA promoter-TSS (FBgn0016694) protein_coding-promoter-TSS (FBgn0016694) 10880 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding CG8478-S2-modencode_R1_peak_7 chr2L 493583 493675 + 20 NA intron (FBgn0003963, intron 2 of 8) protein_coding-intron (FBgn0003963, intron 1 of 7) -13941 FBgn0043364 FBgn0043364 FBtr0310030 cbt protein_coding CG8478-S2-modencode_R1_peak_670 chrUextra 18119510 18119678 + 20 NA NA NA NA NA CG8478-S2-modencode_R1_peak_151 chr2R 6364175 6364263 + 20 NA intron (FBgn0261862, intron 1 of 8) protein_coding-intron (FBgn0261862, intron 1 of 8) -1236 FBgn0261862 FBgn0261862 FBtr0301282 whd protein_coding CG8478-S2-modencode_R1_peak_487 chr3R 5902596 5902686 + 19 NA Intergenic Intergenic -1546 FBgn0037786 FBgn0037786 FBtr0309853 CG5361 protein_coding CG8478-S2-modencode_R1_peak_45 chr2L 7038481 7038740 + 19 NA TTS (FBgn0031883) protein_coding-TTS (FBgn0031883) -3749 FBgn0262872 FBgn0262872 FBtr0306230 milt protein_coding CG8478-S2-modencode_R1_peak_172 chr2R 6983930 6984054 + 19 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -9848 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_847 chrX 19158426 19158540 + 19 NA intron (FBgn0040068, intron 3 of 9) protein_coding-intron (FBgn0040068, intron 3 of 9) 2630 FBgn0040068 FBgn0040068 FBtr0333759 vav protein_coding CG8478-S2-modencode_R1_peak_814 chrX 12645427 12645515 + 19 NA Intergenic Intergenic 5121 FBgn0030418 FBgn0030418 FBtr0333722 CG4004 protein_coding CG8478-S2-modencode_R1_peak_651 chr4 1274644 1274820 + 19 NA exon (FBgn0053653, exon 24 of 24) protein_coding-exon (FBgn0053653, exon 24 of 24) 40169 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_628 chr3R 25597395 25597505 + 19 NA intron (FBgn0001297, intron 1 of 2) protein_coding-intron (FBgn0001297, intron 1 of 2) 9003 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding CG8478-S2-modencode_R1_peak_664 chrUextra 3080976 3081086 + 19 NA NA NA NA NA CG8478-S2-modencode_R1_peak_470 chr3R 4573703 4573826 + 19 NA promoter-TSS (FBgn0037623) protein_coding-promoter-TSS (FBgn0037623) 236 FBgn0037624 FBgn0037624 FBtr0081915 CG8223 protein_coding CG8478-S2-modencode_R1_peak_114 chr2R 2109382 2109516 + 19 NA intron (FBgn0263144, intron 1 of 6) protein_coding-intron (FBgn0263144, intron 1 of 6) 905 FBgn0263144 FBgn0263144 FBtr0085993 bin3 protein_coding CG8478-S2-modencode_R1_peak_373 chr3L 12259315 12259404 + 19 NA intron (FBgn0260941, intron 1 of 9) protein_coding-intron (FBgn0260941, intron 1 of 9) -1269 FBgn0052100 FBgn0052100 FBtr0076006 CG32100 protein_coding CG8478-S2-modencode_R1_peak_432 chr3L 22941816 22941942 + 18 NA intron (FBgn0037207, intron 2 of 2) protein_coding-intron (FBgn0037207, intron 2 of 2) 2784 FBgn0037207 FBgn0037207 FBtr0078563 Mes2 protein_coding CG8478-S2-modencode_R1_peak_209 chr2R 9879452 9879573 + 18 NA exon (FBgn0002643, exon 2 of 7) protein_coding-exon (FBgn0002643, exon 2 of 7) -1297 FBgn0020620 FBgn0020620 FBtr0087604 RN-tre protein_coding CG8478-S2-modencode_R1_peak_332 chr3L 3787701 3787810 + 18 NA exon (FBgn0052264, exon 1 of 12) protein_coding-exon (FBgn0052264, exon 1 of 12) -3049 FBgn0052266 FBgn0052266 FBtr0073147 CG32266 protein_coding CG8478-S2-modencode_R1_peak_771 chrX 9747590 9747684 + 17 NA Intergenic Intergenic -11614 FBgn0019929 FBgn0019929 FBtr0071387 Ser7 protein_coding CG8478-S2-modencode_R1_peak_267 chr2R 15518790 15518894 + 17 NA promoter-TSS (FBgn0003435) protein_coding-promoter-TSS (FBgn0003435) -3942 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding CG8478-S2-modencode_R1_peak_396 chr3L 16923691 16923782 + 17 NA TTS (FBgn0036678) protein_coding-TTS (FBgn0036678) -3202 FBgn0036677 FBgn0036677 FBtr0075307 CG13023 protein_coding CG8478-S2-modencode_R1_peak_735 chrX 7590542 7590789 + 17 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) -1714 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding CG8478-S2-modencode_R1_peak_661 chrU 5300444 5300546 + 17 NA NA NA NA NA CG8478-S2-modencode_R1_peak_563 chr3R 16967153 16967334 + 16 NA intron (FBgn0264357, intron 1 of 12) protein_coding-intron (FBgn0264357, intron 1 of 12) 3251 FBgn0250820 FBgn0250820 FBtr0084017 CG5802 protein_coding CG8478-S2-modencode_R1_peak_380 chr3L 12685924 12686036 + 16 NA promoter-TSS (FBgn0014343) protein_coding-promoter-TSS (FBgn0014343) -759 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding CG8478-S2-modencode_R1_peak_96 chr2L 19570522 19570663 + 16 NA promoter-TSS (FBgn0262377) pre_miRNA-promoter-TSS (FBgn0262377) -336 FBgn0262449 FBgn0262449 FBtr0309745 mir-2b-2 pre_miRNA CG8478-S2-modencode_R1_peak_109 chr2R 1598374 1598534 + 16 NA intron (FBgn0000099, intron 1 of 4) protein_coding-intron (FBgn0000099, intron 4 of 7) 6100 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding CG8478-S2-modencode_R1_peak_318 chr3L 647761 647884 + 16 NA promoter-TSS (FBgn0035147) protein_coding-promoter-TSS (FBgn0035147) -952 FBgn0035147 FBgn0035147 FBtr0306917 Gale protein_coding CG8478-S2-modencode_R1_peak_296 chr2R 19759571 19759660 + 16 NA intron (FBgn0011236, intron 1 of 2) protein_coding-intron (FBgn0011236, intron 1 of 2) 1819 FBgn0011236 FBgn0011236 FBtr0072129 ken protein_coding CG8478-S2-modencode_R1_peak_641 chr3R 26637051 26637191 + 16 NA intron (FBgn0027598, intron 1 of 5) protein_coding-intron (FBgn0027598, intron 1 of 5) 2783 FBgn0027598 FBgn0027598 FBtr0310072 cindr protein_coding CG8478-S2-modencode_R1_peak_679 chrX 1517244 1517368 + 15 NA intron (FBgn0000210, intron 1 of 7) protein_coding-intron (FBgn0000210, intron 1 of 7) -5118 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding CG8478-S2-modencode_R1_peak_799 chrX 11291542 11291630 + 15 NA intron (FBgn0001624, intron 4 of 11) protein_coding-intron (FBgn0001624, intron 7 of 8) -12394 FBgn0030296 FBgn0030296 FBtr0309222 CG15196 protein_coding CG8478-S2-modencode_R1_peak_866 chrX 21239612 21239775 + 15 NA promoter-TSS (FBgn0024251) protein_coding-promoter-TSS (FBgn0024251) 52 FBgn0024251 FBgn0024251 FBtr0331744 bbx protein_coding CG8478-S2-modencode_R1_peak_154 chr2R 6446395 6446626 + 15 NA intron (FBgn0263102, intron 1 of 10) protein_coding-intron (FBgn0263102, intron 1 of 9) 1117 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_314 chr3L 633969 634149 + 15 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 3982 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA CG8478-S2-modencode_R1_peak_34 chr2L 5293621 5293714 + 14 NA Intergenic Intergenic -12055 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_652 chr4 1275490 1275598 + 14 NA TTS (FBgn0053653) protein_coding-TTS (FBgn0053653) 40981 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_418 chr3L 18794354 18794444 + 14 NA promoter-TSS (FBgn0001078) protein_coding-promoter-TSS (FBgn0001078) 19376 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_168 chr2R 6960357 6960477 + 14 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -12674 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_315 chr3L 634545 634653 + 14 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 3442 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA CG8478-S2-modencode_R1_peak_435 chr3L 23689601 23689827 + 14 NA Intergenic Intergenic -18677 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding CG8478-S2-modencode_R1_peak_479 chr3R 5170726 5170829 + 13 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) 3182 FBgn0263749 FBgn0263749 FBtr0310401 CG43674 protein_coding CG8478-S2-modencode_R1_peak_99 chr2L 20823983 20824133 + 13 NA promoter-TSS (FBgn0032889) protein_coding-promoter-TSS (FBgn0032889) -378 FBgn0032889 FBgn0032889 FBtr0081418 CG9331 protein_coding CG8478-S2-modencode_R1_peak_669 chrUextra 17373772 17373916 + 13 NA NA NA NA NA CG8478-S2-modencode_R1_peak_357 chr3L 10651563 10651672 + 13 NA intron (FBgn0052066, intron 1 of 3) protein_coding-intron (FBgn0052066, intron 2 of 4) 1464 FBgn0052066 FBgn0052066 FBtr0076277 CG32066 protein_coding CG8478-S2-modencode_R1_peak_50 chr2L 7828877 7828966 + 13 NA intron (FBgn0004177, intron 1 of 3) protein_coding-intron (FBgn0004177, intron 1 of 3) 1178 FBgn0004177 FBgn0004177 FBtr0079525 mts protein_coding