PeakID (cmd=annotatePeaks.pl Nup98-S2-pascual-garcia2017_R1_peaks.broadPeak dm3.fa -gid -gtf Drosophila_melanogaster.BDGP5.78.chr.gtf -cpu 6) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type Nup98-S2-pascual-garcia2017_R1_peak_13405 chrUextra 26599298 26599569 + 428 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3162 chr2L 20148436 20148655 + 400 NA Intergenic Intergenic -13622 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13261 chrU 5630700 5631376 + 393 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3266 chr2L 20638589 20638754 + 382 NA promoter-TSS (FBgn0262688) pseudogene-promoter-TSS (FBgn0262688) -344 FBgn0262688 FBgn0262688 FBtr0305612 CR43158 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_13276 chrU 7458005 7458196 + 373 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6756 chr3L 673409 673701 + 340 NA Intergenic Intergenic 6771 FBgn0035151 FBgn0035151 FBtr0072614 CG17129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13407 chrUextra 27346733 27347298 + 317 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3518 chr2L 21899240 21899634 + 296 NA Intergenic Intergenic -1148 FBgn0032965 FBgn0032965 FBtr0085950 CG11629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13312 chrUextra 439325 439731 + 286 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4887 chr2R 8922585 8922744 + 284 NA Intergenic Intergenic 12129 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9351 chr3R 3300271 3300748 + 280 NA exon (FBgn0065099, exon 1 of 1) snRNA-exon (FBgn0065099, exon 1 of 1) 209 FBgn0065099 FBgn0065099 FBtr0091929 snRNA:7SK snRNA Nup98-S2-pascual-garcia2017_R1_peak_1585 chr2L 11829360 11829477 + 266 NA promoter-TSS (FBgn0000588) protein_coding-promoter-TSS (FBgn0000588) -13 FBgn0000588 FBgn0000588 FBtr0080325 esc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12490 chr3R 25878293 25878417 + 254 NA promoter-TSS (FBgn0039742) protein_coding-promoter-TSS (FBgn0039742) -51 FBgn0039743 FBgn0039743 FBtr0310420 CG7946 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2480 chr2L 16533424 16533569 + 249 NA promoter-TSS (FBgn0032587) protein_coding-promoter-TSS (FBgn0032587) -4574 FBgn0086038 FBgn0086038 FBtr0114314 snoRNA:Me28S-C1237 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4879 chr2R 8878453 8878813 + 247 NA Intergenic Intergenic -2769 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4348 chr2R 4834814 4834949 + 247 NA promoter-TSS (FBgn0027607) protein_coding-promoter-TSS (FBgn0027607) -15 FBgn0027607 FBgn0027607 FBtr0088674 CG8230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4171 chr2R 3420953 3421071 + 246 NA promoter-TSS (FBgn0264294) protein_coding-promoter-TSS (FBgn0264294) -1502 FBgn0264294 FBgn0264294 FBtr0088906 Cyt-b5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2945 chr2L 18936191 18936365 + 242 NA intron (FBgn0032723, intron 6 of 10) protein_coding-intron (FBgn0032723, intron 6 of 10) 7670 FBgn0032723 FBgn0032723 FBtr0081193 ssp3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5216 chr2R 11735533 11735689 + 239 NA promoter-TSS (FBgn0034046) protein_coding-promoter-TSS (FBgn0034046) -500 FBgn0034046 FBgn0034046 FBtr0087287 tun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5714 chr2R 16174552 16174675 + 236 NA promoter-TSS (FBgn0034498) protein_coding-promoter-TSS (FBgn0034498) -29 FBgn0034498 FBgn0034498 FBtr0086302 CG16868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7007 chr3L 3787988 3788117 + 235 NA promoter-TSS (FBgn0052264) protein_coding-promoter-TSS (FBgn0052264) -2752 FBgn0052266 FBgn0052266 FBtr0073147 CG32266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6130 chr2R 19634318 19634476 + 234 NA promoter-TSS (FBgn0034899) protein_coding-promoter-TSS (FBgn0034899) -49 FBgn0000562 FBgn0000562 FBtr0114586 egl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4139 chr2R 3239906 3240285 + 233 NA intron (FBgn0033159, intron 5 of 23) protein_coding-intron (FBgn0033159, intron 6 of 23) 29279 FBgn0033159 FBgn0033159 FBtr0306787 Dscam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12519 chr3R 26253873 26253973 + 233 NA promoter-TSS (FBgn0039768) protein_coding-promoter-TSS (FBgn0039768) 75 FBgn0039767 FBgn0039767 FBtr0085627 CG2218 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_974 chr2L 7188720 7188909 + 228 NA promoter-TSS (FBgn0031894) protein_coding-promoter-TSS (FBgn0031894) -746 FBgn0031894 FBgn0031894 FBtr0079419 CG4496 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13348 chrUextra 7039413 7039718 + 225 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9616 chr3R 5618941 5619063 + 215 NA promoter-TSS (FBgn0037757) protein_coding-promoter-TSS (FBgn0037757) -28 FBgn0037757 FBgn0037757 FBtr0082141 CG8516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13359 chrUextra 11426196 11426277 + 213 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7033 chr3L 4233979 4234111 + 213 NA intron (FBgn0001257, intron 1 of 2) protein_coding-intron (FBgn0001257, intron 1 of 2) -6263 FBgn0035515 FBgn0035515 FBtr0073226 CG14997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13339 chrUextra 3783472 3783827 + 211 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4571 chr2R 6446372 6446553 + 210 NA intron (FBgn0263102, intron 1 of 10) protein_coding-intron (FBgn0263102, intron 1 of 9) 1069 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11406 chr3R 19883063 19883203 + 207 NA promoter-TSS (FBgn0040283) protein_coding-promoter-TSS (FBgn0040283) -104 FBgn0001230 FBgn0001230 FBtr0084589 Hsp68 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9714 chr3R 6447886 6448349 + 206 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -16725 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13329 chrUextra 1067753 1067836 + 206 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8544 chr3L 19056180 19056316 + 205 NA promoter-TSS (FBgn0036843) protein_coding-promoter-TSS (FBgn0036843) -17 FBgn0036843 FBgn0036843 FBtr0075025 CG6812 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8192 chr3L 16004856 16005027 + 204 NA promoter-TSS (FBgn0263601) protein_coding-promoter-TSS (FBgn0263601) -1532 FBgn0263601 FBgn0263601 FBtr0333578 mib1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13335 chrUextra 2684517 2684852 + 203 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11883 chr3R 23384824 23384965 + 201 NA promoter-TSS (FBgn0004387) protein_coding-promoter-TSS (FBgn0004387) -32 FBgn0004387 FBgn0004387 FBtr0304671 Klp98A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7406 chr3L 8417949 8418087 + 196 NA promoter-TSS (FBgn0020224) protein_coding-promoter-TSS (FBgn0020224) -36 FBgn0020224 FBgn0020224 FBtr0076614 Cbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_371 chr2L 2161607 2161784 + 194 NA promoter-TSS (FBgn0000097) protein_coding-promoter-TSS (FBgn0000097) 5935 FBgn0031393 FBgn0031393 FBtr0077832 CG15382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1757 chr2L 13019113 13019220 + 194 NA TTS (FBgn0028965) protein_coding-TTS (FBgn0028965) 268 FBgn0032467 FBgn0032467 FBtr0301247 CG9934 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5892 chr2R 17572723 17572820 + 190 NA promoter-TSS (FBgn0034654) protein_coding-promoter-TSS (FBgn0034654) -17 FBgn0034654 FBgn0034654 FBtr0071670 CG10306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9075 chr3R 1511114 1511262 + 188 NA promoter-TSS (FBgn0037364) protein_coding-promoter-TSS (FBgn0037364) -40 FBgn0037364 FBgn0037364 FBtr0078727 Rab23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11162 chr3R 16782725 16782929 + 188 NA promoter-TSS (FBgn0002921) protein_coding-promoter-TSS (FBgn0002921) 8391 FBgn0002921 FBgn0002921 FBtr0089516 Atpalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4682 chr2R 7417055 7417297 + 185 NA Intergenic Intergenic -1788 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10862 chr3R 14809604 14809772 + 183 NA promoter-TSS (FBgn0261792) protein_coding-promoter-TSS (FBgn0261792) -59 FBgn0026239 FBgn0026239 FBtr0112924 gukh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11314 chr3R 18273654 18273792 + 182 NA promoter-TSS (FBgn0085405) protein_coding-promoter-TSS (FBgn0085405) -39 FBgn0085405 FBgn0085405 FBtr0112608 CG34376 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2402 chr2L 16049687 16050043 + 179 NA promoter-TSS (FBgn0013433) protein_coding-promoter-TSS (FBgn0013433) -130 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3480 chr2L 21828125 21828827 + 174 NA promoter-TSS (FBgn0003866) protein_coding-promoter-TSS (FBgn0003866) -117 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13673 chrX 12629239 12629507 + 174 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 7104 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13589 chrX 7195139 7195287 + 173 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -6761 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9033 chr3R 1043125 1043311 + 172 NA promoter-TSS (FBgn0259212) protein_coding-promoter-TSS (FBgn0259212) -71 FBgn0259212 FBgn0259212 FBtr0299710 cno protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10012 chr3R 8823703 8823816 + 172 NA promoter-TSS (FBgn0038107) protein_coding-promoter-TSS (FBgn0038107) -52 FBgn0038108 FBgn0038108 FBtr0306257 CG7518 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7254 chr3L 6957808 6958009 + 171 NA promoter-TSS (FBgn0261445) protein_coding-promoter-TSS (FBgn0261445) -50 FBgn0261445 FBgn0261445 FBtr0076938 sgl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_906 chr2L 6677584 6677668 + 170 NA promoter-TSS (FBgn0031848) protein_coding-promoter-TSS (FBgn0031848) -1 FBgn0031848 FBgn0031848 FBtr0079319 CG11329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13846 chrX 21229243 21229357 + 170 NA promoter-TSS (FBgn0011710) protein_coding-promoter-TSS (FBgn0011710) -3 FBgn0011710 FBgn0011710 FBtr0077198 Sep1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13375 chrUextra 17026080 17026216 + 170 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13420 chrUextra 28689515 28689585 + 169 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13354 chrUextra 9037083 9037429 + 168 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8452 chr3L 17964252 17964629 + 167 NA promoter-TSS (FBgn0000568) protein_coding-promoter-TSS (FBgn0000568) 31738 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_13591 chrX 7200689 7200885 + 165 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -1187 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13721 chrX 13457653 13457879 + 164 NA promoter-TSS (FBgn0086674) protein_coding-promoter-TSS (FBgn0086674) -90 FBgn0086674 FBgn0086674 FBtr0330399 Tango13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10391 chr3R 11818924 11819081 + 162 NA promoter-TSS (FBgn0003507) protein_coding-promoter-TSS (FBgn0003507) 7079 FBgn0003507 FBgn0003507 FBtr0083216 srp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13711 chrX 13290160 13290296 + 161 NA promoter-TSS (FBgn0030482) protein_coding-promoter-TSS (FBgn0030482) -698 FBgn0030482 FBgn0030482 FBtr0073777 CG1673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_386 chr2L 2376296 2376448 + 157 NA promoter-TSS (FBgn0031420) protein_coding-promoter-TSS (FBgn0031420) 531 FBgn0031420 FBgn0031420 FBtr0331437 CG9866 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2953 chr2L 19054343 19054451 + 157 NA TTS (FBgn0261396) protein_coding-TTS (FBgn0261396) 316 FBgn0032748 FBgn0032748 FBtr0113043 CG10492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10743 chr3R 14009165 14009261 + 156 NA promoter-TSS (FBgn0261532) protein_coding-promoter-TSS (FBgn0261532) -12 FBgn0261532 FBgn0261532 FBtr0083619 cdm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6844 chr3L 1576559 1576693 + 155 NA promoter-TSS (FBgn0035237) protein_coding-promoter-TSS (FBgn0035237) -73 FBgn0035237 FBgn0035237 FBtr0303993 CG13917 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10103 chr3R 9508899 9509015 + 155 NA promoter-TSS (FBgn0024555) protein_coding-promoter-TSS (FBgn0024555) -723 FBgn0024555 FBgn0024555 FBtr0114604 flfl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1036 chr2L 7984146 7984315 + 153 NA promoter-TSS (FBgn0085450) protein_coding-promoter-TSS (FBgn0085450) -1053 FBgn0031968 FBgn0031968 FBtr0306336 CG7231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13340 chrUextra 3809368 3809785 + 153 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10735 chr3R 13947323 13947801 + 153 NA promoter-TSS (FBgn0003499) protein_coding-promoter-TSS (FBgn0003499) 12847 FBgn0051518 FBgn0051518 FBtr0083545 tRNA:CR31518 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12534 chr3R 26388783 26388913 + 153 NA promoter-TSS (FBgn0082582) protein_coding-promoter-TSS (FBgn0082582) -2927 FBgn0083991 FBgn0083991 FBtr0111047 CG34155 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3364 chr2L 21262926 21263005 + 152 NA promoter-TSS (FBgn0032938) protein_coding-promoter-TSS (FBgn0032938) 2 FBgn0032938 FBgn0032938 FBtr0330680 CG8671 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12166 chr3R 24521883 24521978 + 151 NA promoter-TSS (FBgn0027655) protein_coding-promoter-TSS (FBgn0027655) -34 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5007 chr2R 9829600 9829790 + 151 NA promoter-TSS (FBgn0013733) protein_coding-promoter-TSS (FBgn0013733) 1187 FBgn0033885 FBgn0033885 FBtr0087615 DJ-1alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5460 chr2R 14071567 14071704 + 151 NA promoter-TSS (FBgn0034315) protein_coding-promoter-TSS (FBgn0034315) -40 FBgn0034315 FBgn0034315 FBtr0086771 CG5721 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13350 chrUextra 8133444 8133748 + 148 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6005 chr2R 18686488 18686612 + 146 NA promoter-TSS (FBgn0011211) protein_coding-promoter-TSS (FBgn0011211) -11 FBgn0011211 FBgn0011211 FBtr0071883 blw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6718 chr3L 432683 432834 + 144 NA TTS (FBgn0035139) protein_coding-TTS (FBgn0035139) 1148 FBgn0035139 FBgn0035139 FBtr0072566 CG13891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13384 chrUextra 19603894 19604041 + 144 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6994 chr3L 3418431 3418856 + 143 NA promoter-TSS (FBgn0014388) protein_coding-promoter-TSS (FBgn0014388) -716 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1331 chr2L 9330640 9330756 + 143 NA promoter-TSS (FBgn0010314) protein_coding-promoter-TSS (FBgn0010314) -69 FBgn0010314 FBgn0010314 FBtr0079799 Cks30A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6707 chr3L 361421 361512 + 142 NA promoter-TSS (FBgn0035137) protein_coding-promoter-TSS (FBgn0035137) -6 FBgn0035137 FBgn0035137 FBtr0072549 CG1233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_816 chr2L 5800235 5800347 + 142 NA promoter-TSS (FBgn0031738) protein_coding-promoter-TSS (FBgn0031738) 1684 FBgn0031739 FBgn0031739 FBtr0332037 CG14005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7221 chr3L 6736737 6736918 + 142 NA promoter-TSS (FBgn0261934) protein_coding-promoter-TSS (FBgn0261934) -563 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13371 chrUextra 15572792 15572858 + 141 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13284 chrU 9151294 9151372 + 141 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11741 chr3R 22738540 22738666 + 140 NA promoter-TSS (FBgn0004510) protein_coding-promoter-TSS (FBgn0004510) 5 FBgn0004510 FBgn0004510 FBtr0330167 Ets97D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13603 chrX 8036256 8036367 + 140 NA promoter-TSS (FBgn0025800) protein_coding-promoter-TSS (FBgn0025800) -10 FBgn0025800 FBgn0025800 FBtr0071192 Smox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7495 chr3L 9328922 9329045 + 139 NA promoter-TSS (FBgn0035975) protein_coding-promoter-TSS (FBgn0035975) 194 FBgn0035975 FBgn0035975 FBtr0076433 PGRP-LA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4945 chr2R 9370683 9370830 + 139 NA promoter-TSS (FBgn0000119) protein_coding-promoter-TSS (FBgn0000119) -33 FBgn0000119 FBgn0000119 FBtr0087702 arr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8259 chr3L 16404902 16405002 + 138 NA promoter-TSS (FBgn0028399) protein_coding-promoter-TSS (FBgn0028399) -870 FBgn0028399 FBgn0028399 FBtr0331174 TMS1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4654 chr2R 7254056 7254256 + 138 NA promoter-TSS (FBgn0033627) protein_coding-promoter-TSS (FBgn0033627) -1628 FBgn0033627 FBgn0033627 FBtr0088129 CG13204 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10276 chr3R 11112465 11112649 + 137 NA intron (FBgn0003721, intron 4 of 11) protein_coding-intron (FBgn0003721, intron 3 of 9) 5285 FBgn0003721 FBgn0003721 FBtr0305656 Tm1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1542 chr2L 11446085 11446344 + 136 NA promoter-TSS (FBgn0261648) protein_coding-promoter-TSS (FBgn0261648) -611 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7675 chr3L 11701115 11701253 + 136 NA promoter-TSS (FBgn0036196) protein_coding-promoter-TSS (FBgn0036196) 469 FBgn0036196 FBgn0036196 FBtr0076125 CG11658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4792 chr2R 8088309 8088408 + 136 NA promoter-TSS (FBgn0033699) protein_coding-promoter-TSS (FBgn0033699) -25 FBgn0033699 FBgn0033699 FBtr0088007 RpS11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13334 chrUextra 2678529 2678654 + 136 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4167 chr2R 3354237 3354370 + 135 NA promoter-TSS (FBgn0033179) protein_coding-promoter-TSS (FBgn0033179) -67 FBgn0033179 FBgn0033179 FBtr0088997 p47 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7457 chr3L 8961583 8961674 + 135 NA promoter-TSS (FBgn0035945) protein_coding-promoter-TSS (FBgn0035945) 0 FBgn0035945 FBgn0035945 FBtr0301141 CG5026 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8564 chr3L 19591838 19591928 + 134 NA promoter-TSS (FBgn0010417) protein_coding-promoter-TSS (FBgn0010417) -28 FBgn0005386 FBgn0005386 FBtr0306010 ash1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10392 chr3R 11876457 11876566 + 134 NA promoter-TSS (FBgn0027948) protein_coding-promoter-TSS (FBgn0027948) -1089 FBgn0027948 FBgn0027948 FBtr0304803 msps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9697 chr3R 6361576 6361744 + 134 NA intron (FBgn0001235, intron 7 of 12) protein_coding-intron (FBgn0001235, intron 6 of 11) -22882 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7302 chr3L 7316467 7316565 + 133 NA promoter-TSS (FBgn0035762) protein_coding-promoter-TSS (FBgn0035762) -203 FBgn0035762 FBgn0035762 FBtr0076838 CG8605 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13337 chrUextra 3094535 3094693 + 133 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11365 chr3R 19182230 19182319 + 132 NA promoter-TSS (FBgn0024509) protein_coding-promoter-TSS (FBgn0024509) -11 FBgn0024509 FBgn0024509 FBtr0084409 sec13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7677 chr3L 11702046 11702139 + 132 NA promoter-TSS (FBgn0036196) protein_coding-promoter-TSS (FBgn0036196) 13 FBgn0261353 FBgn0261353 FBtr0302271 CG42630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11392 chr3R 19646226 19646398 + 131 NA promoter-TSS (FBgn0085384) protein_coding-promoter-TSS (FBgn0085384) -2 FBgn0085384 FBgn0085384 FBtr0306734 CG34355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7512 chr3L 9847163 9847298 + 129 NA intron (FBgn0004390, intron 1 of 4) protein_coding-intron (FBgn0004390, intron 1 of 4) 1155 FBgn0004390 FBgn0004390 FBtr0330168 Gap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4389 chr2R 4990687 4990785 + 128 NA promoter-TSS (FBgn0015838) protein_coding-promoter-TSS (FBgn0015838) -13 FBgn0015838 FBgn0015838 FBtr0330624 Vang protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7161 chr3L 6186237 6186371 + 128 NA promoter-TSS (FBgn0024921) protein_coding-promoter-TSS (FBgn0024921) -25 FBgn0035692 FBgn0035692 FBtr0077015 CG13298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3029 chr2L 19398895 19399004 + 128 NA promoter-TSS (FBgn0032775) protein_coding-promoter-TSS (FBgn0032775) -457 FBgn0032775 FBgn0032775 FBtr0300822 CG17544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9509 chr3R 4541894 4542010 + 127 NA promoter-TSS (FBgn0037614) protein_coding-promoter-TSS (FBgn0037614) -4 FBgn0037614 FBgn0037614 FBtr0300544 CG8116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11145 chr3R 16656296 16656427 + 126 NA promoter-TSS (FBgn0051223) protein_coding-promoter-TSS (FBgn0051223) -24 FBgn0027493 FBgn0027493 FBtr0310504 CG17273 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6996 chr3L 3460518 3460624 + 126 NA promoter-TSS (FBgn0026259) protein_coding-promoter-TSS (FBgn0026259) 406 FBgn0026259 FBgn0026259 FBtr0073144 eIF5B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12623 chr3R 26912180 26912536 + 124 NA Intergenic Intergenic 10682 FBgn0039816 FBgn0039816 FBtr0085741 CG11317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13283 chrU 9143084 9143161 + 123 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5990 chr2R 18573619 18573860 + 120 NA exon (FBgn0020257, exon 1 of 1) protein_coding-exon (FBgn0020257, exon 1 of 1) 2739 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4595 chr2R 6670352 6670492 + 120 NA promoter-TSS (FBgn0053144) protein_coding-promoter-TSS (FBgn0053144) -8542 FBgn0050018 FBgn0050018 FBtr0304706 mthl13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10565 chr3R 12774362 12774587 + 120 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -17139 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4143 chr2R 3295337 3295457 + 120 NA promoter-TSS (FBgn0033166) protein_coding-promoter-TSS (FBgn0033166) -73 FBgn0033166 FBgn0033166 FBtr0089009 Eaf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13379 chrUextra 17985645 17985769 + 120 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4518 chr2R 6115601 6115710 + 120 NA promoter-TSS (FBgn0000448) protein_coding-promoter-TSS (FBgn0000448) -197 FBgn0000448 FBgn0000448 FBtr0306346 Hr46 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7667 chr3L 11549315 11549409 + 119 NA intron (FBgn0259481, intron 1 of 3) protein_coding-intron (FBgn0259481, intron 1 of 3) -3617 FBgn0263569 FBgn0263569 FBtr0309721 mir-4968 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_97 chr2L 851014 851156 + 119 NA promoter-TSS (FBgn0020304) protein_coding-promoter-TSS (FBgn0020304) -14 FBgn0020304 FBgn0020304 FBtr0290075 drongo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7605 chr3L 10731404 10731770 + 119 NA Intergenic Intergenic -33505 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6861 chr3L 1731064 1731182 + 118 NA promoter-TSS (FBgn0027594) protein_coding-promoter-TSS (FBgn0027594) -16 FBgn0027594 FBgn0027594 FBtr0334079 drpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10526 chr3R 12589754 12590048 + 118 NA promoter-TSS (FBgn0084245) ncRNA-promoter-TSS (FBgn0084245) -460 FBgn0084245 FBgn0084245 FBtr0113490 tre-3 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4499 chr2R 5963123 5963210 + 118 NA promoter-TSS (FBgn0033482) protein_coding-promoter-TSS (FBgn0033482) -19 FBgn0033482 FBgn0033482 FBtr0088428 CG1371 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11637 chr3R 22287124 22287300 + 117 NA promoter-TSS (FBgn0039430) protein_coding-promoter-TSS (FBgn0039430) 3137 FBgn0039429 FBgn0039429 FBtr0085014 CG14238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11414 chr3R 20120647 20120810 + 117 NA promoter-TSS (FBgn0259685) protein_coding-promoter-TSS (FBgn0259685) -72 FBgn0259685 FBgn0259685 FBtr0304726 crb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8594 chr3L 20219424 20219530 + 117 NA promoter-TSS (FBgn0260397) protein_coding-promoter-TSS (FBgn0260397) -4 FBgn0260397 FBgn0260397 FBtr0332693 Su(var)3-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5307 chr2R 12476713 12476823 + 116 NA promoter-TSS (FBgn0034141) protein_coding-promoter-TSS (FBgn0034141) -82 FBgn0034141 FBgn0034141 FBtr0087121 CG8311 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9260 chr3R 2756273 2756454 + 115 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) 2199 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13343 chrUextra 5224048 5224435 + 115 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5485 chr2R 14230263 14230466 + 115 NA intron (FBgn0010575, intron 1 of 10) protein_coding-intron (FBgn0010575, intron 1 of 11) 14437 FBgn0010575 FBgn0010575 FBtr0329996 sbb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11060 chr3R 16078375 16078505 + 115 NA promoter-TSS (FBgn0262582) protein_coding-promoter-TSS (FBgn0262582) -40547 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4476 chr2R 5698284 5698417 + 115 NA TTS (FBgn0033446) protein_coding-TTS (FBgn0033446) 1929 FBgn0033446 FBgn0033446 FBtr0088494 CG1648 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10133 chr3R 9702975 9703156 + 115 NA Intergenic Intergenic -2427 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6736 chr3L 616582 617154 + 114 NA promoter-TSS (FBgn0261636) protein_coding-promoter-TSS (FBgn0261636) -222 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10338 chr3R 11476823 11476934 + 114 NA Intergenic Intergenic 13988 FBgn0263041 FBgn0263041 FBtr0306930 CG43336 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4681 chr2R 7415712 7415974 + 113 NA promoter-TSS (FBgn0000577) protein_coding-promoter-TSS (FBgn0000577) -455 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5384 chr2R 13279679 13279809 + 113 NA promoter-TSS (FBgn0011879) tRNA-promoter-TSS (FBgn0011879) 24 FBgn0011879 FBgn0011879 FBtr0086908 tRNA:H:56E tRNA Nup98-S2-pascual-garcia2017_R1_peak_11449 chr3R 20859166 20859257 + 113 NA promoter-TSS (FBgn0039260) protein_coding-promoter-TSS (FBgn0039260) -34 FBgn0039260 FBgn0039260 FBtr0084796 Smg6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4349 chr2R 4839781 4839870 + 112 NA promoter-TSS (FBgn0011300) protein_coding-promoter-TSS (FBgn0011300) -21 FBgn0011300 FBgn0011300 FBtr0300599 babo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4232 chr2R 4044122 4044213 + 112 NA promoter-TSS (FBgn0010504) protein_coding-promoter-TSS (FBgn0010504) -39 FBgn0263593 FBgn0263593 FBtr0303577 Lpin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11735 chr3R 22707202 22707495 + 112 NA promoter-TSS (FBgn0004359) protein_coding-promoter-TSS (FBgn0004359) -108 FBgn0004359 FBgn0004359 FBtr0085065 T48 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11347 chr3R 18953711 18953806 + 111 NA promoter-TSS (FBgn0051457) protein_coding-promoter-TSS (FBgn0051457) -52 FBgn0051457 FBgn0051457 FBtr0084405 CG31457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_375 chr2L 2203303 2203552 + 110 NA TTS (FBgn0051668) protein_coding-TTS (FBgn0051668) 2739 FBgn0051668 FBgn0051668 FBtr0307523 CG31668 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7256 chr3L 6973121 6973306 + 110 NA promoter-TSS (FBgn0001104) protein_coding-promoter-TSS (FBgn0001104) -60 FBgn0001104 FBgn0001104 FBtr0076934 G-ialpha65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13577 chrX 6418367 6418540 + 109 NA promoter-TSS (FBgn0029873) protein_coding-promoter-TSS (FBgn0029873) -44 FBgn0029873 FBgn0029873 FBtr0070912 CG3918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13819 chrX 18682478 18682583 + 109 NA promoter-TSS (FBgn0004462) protein_coding-promoter-TSS (FBgn0004462) 31 FBgn0004462 FBgn0004462 FBtr0307198 Pk17E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13404 chrUextra 26582301 26582377 + 109 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12464 chr3R 25683197 25683302 + 108 NA promoter-TSS (FBgn0039710) protein_coding-promoter-TSS (FBgn0039710) -58 FBgn0039710 FBgn0039710 FBtr0085527 dgt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9290 chr3R 2956646 2956805 + 108 NA promoter-TSS (FBgn0051493) protein_coding-promoter-TSS (FBgn0051493) 15 FBgn0051491 FBgn0051491 FBtr0081610 tRNA:CR31491 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3040 chr2L 19508727 19508844 + 107 NA promoter-TSS (FBgn0032796) protein_coding-promoter-TSS (FBgn0032796) -25 FBgn0032796 FBgn0032796 FBtr0329963 CG10188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13378 chrUextra 17373780 17373875 + 107 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12551 chr3R 26634205 26634351 + 107 NA promoter-TSS (FBgn0027598) protein_coding-promoter-TSS (FBgn0027598) -60 FBgn0027598 FBgn0027598 FBtr0310072 cindr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10444 chr3R 12070440 12070637 + 107 NA intron (FBgn0040071, intron 1 of 1) protein_coding-intron (FBgn0040071, intron 1 of 1) 1997 FBgn0040071 FBgn0040071 FBtr0083258 tara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13362 chrUextra 12698926 12698995 + 107 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7403 chr3L 8388157 8388304 + 106 NA promoter-TSS (FBgn0035888) protein_coding-promoter-TSS (FBgn0035888) -870 FBgn0035888 FBgn0035888 FBtr0307378 CG7120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_487 chr2L 3302265 3302356 + 105 NA intron (FBgn0031516, intron 1 of 7) protein_coding-intron (FBgn0031516, intron 1 of 7) 819 FBgn0031516 FBgn0031516 FBtr0077604 CG9663 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7000 chr3L 3515707 3515813 + 105 NA promoter-TSS (FBgn0005640) protein_coding-promoter-TSS (FBgn0005640) 9 FBgn0005640 FBgn0005640 FBtr0110924 Eip63E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4884 chr2R 8903135 8903547 + 105 NA Intergenic Intergenic 19335 FBgn0008654 FBgn0008654 FBtr0087793 Su(z)2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8399 chr3L 17570646 17570968 + 105 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -11545 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5744 chr2R 16439564 16439692 + 105 NA promoter-TSS (FBgn0034518) protein_coding-promoter-TSS (FBgn0034518) -37 FBgn0034519 FBgn0034519 FBtr0100677 CG18065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5507 chr2R 14416341 14416427 + 104 NA intron (FBgn0034356, intron 1 of 1) protein_coding-intron (FBgn0034356, intron 1 of 1) -3529 FBgn0034356 FBgn0034356 FBtr0113093 CG10924 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4140 chr2R 3269427 3269574 + 104 NA promoter-TSS (FBgn0033159) protein_coding-promoter-TSS (FBgn0033159) -126 FBgn0033159 FBgn0033159 FBtr0306787 Dscam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13677 chrX 12647752 12648233 + 104 NA Intergenic Intergenic 6658 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13338 chrUextra 3204763 3204909 + 104 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11436 chr3R 20594410 20594534 + 103 NA promoter-TSS (FBgn0040600) protein_coding-promoter-TSS (FBgn0040600) -604 FBgn0040600 FBgn0040600 FBtr0084693 CG13631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5120 chr2R 10868707 10868800 + 103 NA promoter-TSS (FBgn0033988) protein_coding-promoter-TSS (FBgn0033988) -29 FBgn0033988 FBgn0033988 FBtr0301507 pcs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13510 chrX 3347234 3347308 + 102 NA Intergenic Intergenic 7002 FBgn0029659 FBgn0029659 FBtr0331608 CG16782 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_342 chr2L 1884422 1884720 + 102 NA promoter-TSS (FBgn0031374) protein_coding-promoter-TSS (FBgn0031374) -51 FBgn0031374 FBgn0031374 FBtr0110882 CG7337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9809 chr3R 7179190 7179556 + 102 NA promoter-TSS (FBgn0026064) protein_coding-promoter-TSS (FBgn0026064) -520 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5789 chr2R 16885589 16885745 + 102 NA intron (FBgn0034570, intron 1 of 6) protein_coding-intron (FBgn0034570, intron 1 of 6) 1942 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13372 chrUextra 15996497 15996556 + 102 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4889 chr2R 8927064 8927194 + 102 NA Intergenic Intergenic 7664 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8062 chr3L 14530573 14530788 + 101 NA promoter-TSS (FBgn0026409) protein_coding-promoter-TSS (FBgn0026409) -146 FBgn0026409 FBgn0026409 FBtr0308595 Mpcp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4026 chr2R 1930089 1930188 + 101 NA promoter-TSS (FBgn0033055) protein_coding-promoter-TSS (FBgn0033055) -22 FBgn0033055 FBgn0033055 FBtr0085974 tbce protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13654 chrX 11249875 11249945 + 100 NA promoter-TSS (FBgn0000499) protein_coding-promoter-TSS (FBgn0000499) -4 FBgn0000499 FBgn0000499 FBtr0073454 dsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4670 chr2R 7362805 7363236 + 100 NA promoter-TSS (FBgn0001269) protein_coding-promoter-TSS (FBgn0001269) -190 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9713 chr3R 6442953 6443120 + 100 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -11644 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9742 chr3R 6678093 6678229 + 100 NA promoter-TSS (FBgn0037841) protein_coding-promoter-TSS (FBgn0037841) -285 FBgn0037841 FBgn0037841 FBtr0113216 CG4565 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1475 chr2L 10850868 10850978 + 100 NA promoter-TSS (FBgn0004363) protein_coding-promoter-TSS (FBgn0004363) -75 FBgn0004363 FBgn0004363 FBtr0080182 porin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9909 chr3R 8070334 8070424 + 100 NA Intergenic Intergenic -5548 FBgn0038007 FBgn0038007 FBtr0082617 Cyp313a3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10218 chr3R 10482616 10482722 + 100 NA promoter-TSS (FBgn0038250) protein_coding-promoter-TSS (FBgn0038250) -510 FBgn0038250 FBgn0038250 FBtr0082966 CG3505 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4076 chr2R 2695052 2695168 + 100 NA promoter-TSS (FBgn0014028) protein_coding-promoter-TSS (FBgn0014028) -7 FBgn0014028 FBgn0014028 FBtr0086156 SdhB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1049 chr2L 8082947 8083060 + 99 NA promoter-TSS (FBgn0020240) protein_coding-promoter-TSS (FBgn0020240) -21 FBgn0020240 FBgn0020240 FBtr0079543 Mcr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5229 chr2R 11809590 11809745 + 99 NA promoter-TSS (FBgn0264089) protein_coding-promoter-TSS (FBgn0264089) -44 FBgn0264089 FBgn0264089 FBtr0330733 sli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12449 chr3R 25642158 25642237 + 99 NA promoter-TSS (FBgn0039702) protein_coding-promoter-TSS (FBgn0039702) -25 FBgn0039702 FBgn0039702 FBtr0085533 Vps16B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4668 chr2R 7357043 7357395 + 99 NA Intergenic Intergenic -5991 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13426 chrUextra 28929888 28929952 + 98 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4991 chr2R 9710318 9710407 + 98 NA intron (FBgn0000662, intron 1 of 4) protein_coding-intron (FBgn0000662, intron 1 of 3) 1692 FBgn0000662 FBgn0000662 FBtr0304697 fl(2)d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13385 chrUextra 20462989 20463054 + 98 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13704 chrX 13190675 13190753 + 98 NA promoter-TSS (FBgn0030468) protein_coding-promoter-TSS (FBgn0030468) -30 FBgn0030467 FBgn0030467 FBtr0073796 CG1764 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11173 chr3R 16927417 16927523 + 98 NA promoter-TSS (FBgn0038855) protein_coding-promoter-TSS (FBgn0038855) -30 FBgn0038854 FBgn0038854 FBtr0084035 CG7044 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12465 chr3R 25687162 25687265 + 98 NA promoter-TSS (FBgn0039713) protein_coding-promoter-TSS (FBgn0039713) -16 FBgn0039712 FBgn0039712 FBtr0085523 CG15514 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4294 chr2R 4532579 4532710 + 98 NA Intergenic Intergenic -4496 FBgn0003892 FBgn0003892 FBtr0089427 ptc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4628 chr2R 7090436 7090529 + 98 NA intron (FBgn0003396, intron 1 of 6) protein_coding-intron (FBgn0003396, intron 2 of 7) 16287 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4497 chr2R 5911472 5911548 + 97 NA intron (FBgn0022382, intron 2 of 9) protein_coding-intron (FBgn0022382, intron 2 of 9) 2037 FBgn0022382 FBgn0022382 FBtr0112902 Pka-R2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13475 chrX 1816929 1817040 + 97 NA promoter-TSS (FBgn0023508) protein_coding-promoter-TSS (FBgn0023508) -30 FBgn0023508 FBgn0023508 FBtr0332586 Ocrl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13369 chrUextra 14491626 14491691 + 96 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4888 chr2R 8923050 8923195 + 96 NA Intergenic Intergenic 11671 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13844 chrX 21210656 21210816 + 96 NA promoter-TSS (FBgn0000709) protein_coding-promoter-TSS (FBgn0000709) -87 FBgn0000709 FBgn0000709 FBtr0077192 fliI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10648 chr3R 13443790 13443968 + 96 NA promoter-TSS (FBgn0038528) protein_coding-promoter-TSS (FBgn0038528) 24 FBgn0011944 FBgn0011944 FBtr0083501 tRNA:P:90Ca tRNA Nup98-S2-pascual-garcia2017_R1_peak_4493 chr2R 5846323 5846428 + 96 NA promoter-TSS (FBgn0033466) protein_coding-promoter-TSS (FBgn0033466) -25 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6750 chr3L 627922 628564 + 96 NA promoter-TSS (FBgn0263039) ncRNA-promoter-TSS (FBgn0263039) -227 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13270 chrU 6445290 6445351 + 96 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7639 chr3L 11116288 11116456 + 95 NA promoter-TSS (FBgn0036136) protein_coding-promoter-TSS (FBgn0036136) -56 FBgn0036136 FBgn0036136 FBtr0076223 Ufd1-like protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6145 chr2R 19844889 19844998 + 95 NA promoter-TSS (FBgn0029105) protein_coding-promoter-TSS (FBgn0029105) -17 FBgn0034940 FBgn0034940 FBtr0072207 CG16787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5636 chr2R 15616773 15616868 + 95 NA promoter-TSS (FBgn0050449) tRNA-promoter-TSS (FBgn0050449) 33 FBgn0050449 FBgn0050449 FBtr0086333 tRNA:CR30449 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13679 chrX 12650442 12650610 + 95 NA TTS (FBgn0020513) protein_coding-TTS (FBgn0020513) 4124 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1605 chr2L 12093696 12093797 + 94 NA promoter-TSS (FBgn0032407) protein_coding-promoter-TSS (FBgn0032407) -25 FBgn0032407 FBgn0032407 FBtr0080327 Pex19 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13808 chrX 18279236 18279364 + 94 NA promoter-TSS (FBgn0008635) protein_coding-promoter-TSS (FBgn0008635) -72 FBgn0008635 FBgn0008635 FBtr0074576 betaCop protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6075 chr2R 19244874 19244976 + 93 NA promoter-TSS (FBgn0034850) protein_coding-promoter-TSS (FBgn0034850) -23 FBgn0034849 FBgn0034849 FBtr0329860 CG3500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5982 chr2R 18457372 18457555 + 93 NA intron (FBgn0260866, intron 1 of 3) protein_coding-intron (FBgn0260866, intron 1 of 3) 7611 FBgn0034737 FBgn0034737 FBtr0071836 CG11362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8949 chr3R 255035 255121 + 93 NA promoter-TSS (FBgn0037248) protein_coding-promoter-TSS (FBgn0037248) -27 FBgn0037248 FBgn0037248 FBtr0301244 Spargel protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2156 chr2L 15057835 15057999 + 93 NA promoter-TSS (FBgn0000317) protein_coding-promoter-TSS (FBgn0000317) -69 FBgn0000317 FBgn0000317 FBtr0080724 ck protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11158 chr3R 16738665 16738768 + 93 NA promoter-TSS (FBgn0263460) snoRNA-promoter-TSS (FBgn0263460) -115 FBgn0263460 FBgn0263460 FBtr0309759 snoRNA:CG31191-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_13705 chrX 13196762 13196910 + 92 NA Intergenic Intergenic -2716 FBgn0030469 FBgn0030469 FBtr0073759 CG15745 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1869 chr2L 14024179 14024268 + 92 NA Intergenic Intergenic -2787 FBgn0028519 FBgn0028519 FBtr0080591 CG4500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13411 chrUextra 28172266 28172327 + 92 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13674 chrX 12629935 12630120 + 92 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 6450 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_221 chr2L 1362381 1362462 + 92 NA promoter-TSS (FBgn0053126) protein_coding-promoter-TSS (FBgn0053126) -689 FBgn0053126 FBgn0053126 FBtr0329947 NLaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10066 chr3R 9260676 9260840 + 91 NA promoter-TSS (FBgn0004049) protein_coding-promoter-TSS (FBgn0004049) -54 FBgn0004049 FBgn0004049 FBtr0114376 yrt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13675 chrX 12633234 12633321 + 91 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 3200 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5095 chr2R 10645321 10645395 + 91 NA promoter-TSS (FBgn0033962) protein_coding-promoter-TSS (FBgn0033962) 0 FBgn0033962 FBgn0033962 FBtr0087470 CG10153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13769 chrX 16316726 16316842 + 91 NA promoter-TSS (FBgn0026575) protein_coding-promoter-TSS (FBgn0026575) -93 FBgn0026575 FBgn0026575 FBtr0290069 hang protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4696 chr2R 7489004 7489379 + 91 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 3250 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10722 chr3R 13889050 13889295 + 90 NA Intergenic Intergenic -14089 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13408 chrUextra 27485364 27485518 + 89 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9639 chr3R 5868593 5868698 + 89 NA promoter-TSS (FBgn0027524) protein_coding-promoter-TSS (FBgn0027524) -28 FBgn0053208 FBgn0053208 FBtr0273185 Mical protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2975 chr2L 19185995 19186078 + 89 NA promoter-TSS (FBgn0010309) protein_coding-promoter-TSS (FBgn0010309) -7 FBgn0010309 FBgn0010309 FBtr0302561 pigeon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4391 chr2R 5019905 5020003 + 88 NA promoter-TSS (FBgn0033382) protein_coding-promoter-TSS (FBgn0033382) -38 FBgn0033382 FBgn0033382 FBtr0302496 Hydr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4506 chr2R 6029745 6029906 + 88 NA promoter-TSS (FBgn0033491) protein_coding-promoter-TSS (FBgn0033491) -20 FBgn0033491 FBgn0033491 FBtr0088332 CG18011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13752 chrX 15217481 15217585 + 88 NA intron (FBgn0004924, intron 4 of 7) protein_coding-intron (FBgn0004924, intron 4 of 7) 3131 FBgn0004924 FBgn0004924 FBtr0074006 Top1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12740 chr3R 27406389 27406476 + 88 NA promoter-TSS (FBgn0003268) protein_coding-promoter-TSS (FBgn0003268) -20 FBgn0043900 FBgn0043900 FBtr0085806 pygo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11268 chr3R 17681947 17682112 + 87 NA promoter-TSS (FBgn0015229) protein_coding-promoter-TSS (FBgn0015229) -45 FBgn0015229 FBgn0015229 FBtr0084157 glec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7676 chr3L 11701657 11701779 + 87 NA promoter-TSS (FBgn0036196) protein_coding-promoter-TSS (FBgn0036196) -65 FBgn0036196 FBgn0036196 FBtr0076125 CG11658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6142 chr2R 19752872 19752955 + 87 NA promoter-TSS (FBgn0034919) protein_coding-promoter-TSS (FBgn0034919) 4 FBgn0025335 FBgn0025335 FBtr0072227 CG4585 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10647 chr3R 13443472 13443559 + 86 NA promoter-TSS (FBgn0012002) tRNA-promoter-TSS (FBgn0012002) 32 FBgn0012002 FBgn0012002 FBtr0083466 tRNA:V3b:90BC tRNA Nup98-S2-pascual-garcia2017_R1_peak_11116 chr3R 16447584 16447696 + 85 NA promoter-TSS (FBgn0001169) protein_coding-promoter-TSS (FBgn0001169) -25 FBgn0001169 FBgn0001169 FBtr0083916 H protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13787 chrX 17662237 17662540 + 85 NA Intergenic Intergenic -1028 FBgn0024184 FBgn0024184 FBtr0074460 unc-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2952 chr2L 19054055 19054140 + 85 NA promoter-TSS (FBgn0032748) protein_coding-promoter-TSS (FBgn0032748) 16 FBgn0032748 FBgn0032748 FBtr0113043 CG10492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11468 chr3R 21486996 21487090 + 85 NA promoter-TSS (FBgn0027508) protein_coding-promoter-TSS (FBgn0027508) -40 FBgn0027508 FBgn0027508 FBtr0330383 tankyrase protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11968 chr3R 23779784 23779872 + 85 NA promoter-TSS (FBgn0039564) protein_coding-promoter-TSS (FBgn0039564) 6 FBgn0039563 FBgn0039563 FBtr0085265 CG4951 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13351 chrUextra 8455407 8455616 + 85 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4705 chr2R 7528425 7528506 + 84 NA promoter-TSS (FBgn0033638) protein_coding-promoter-TSS (FBgn0033638) -47 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8391 chr3L 17458971 17459094 + 84 NA promoter-TSS (FBgn0036726) protein_coding-promoter-TSS (FBgn0036726) -13 FBgn0036726 FBgn0036726 FBtr0075220 CG7603 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_508 chr2L 3466057 3466171 + 84 NA promoter-TSS (FBgn0021967) protein_coding-promoter-TSS (FBgn0021967) -3 FBgn0005616 FBgn0005616 FBtr0077571 msl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_998 chr2L 7412360 7412442 + 84 NA promoter-TSS (FBgn0028387) protein_coding-promoter-TSS (FBgn0028387) -16 FBgn0028387 FBgn0028387 FBtr0308610 chm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4214 chr2R 3906386 3906686 + 84 NA Intergenic Intergenic 3726 FBgn0263572 FBgn0263572 FBtr0309728 mir-4981 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7822 chr3L 12685996 12686423 + 83 NA promoter-TSS (FBgn0014343) protein_coding-promoter-TSS (FBgn0014343) -530 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11142 chr3R 16641891 16641981 + 83 NA promoter-TSS (FBgn0038827) protein_coding-promoter-TSS (FBgn0038827) -13 FBgn0038827 FBgn0038827 FBtr0083995 Fancd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13660 chrX 11473050 11473126 + 83 NA promoter-TSS (FBgn0019660) ncRNA-promoter-TSS (FBgn0019660) -33 FBgn0019660 FBgn0019660 FBtr0308845 roX2 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13768 chrX 16172289 16172403 + 83 NA promoter-TSS (FBgn0000536) protein_coding-promoter-TSS (FBgn0000536) -64 FBgn0000536 FBgn0000536 FBtr0074214 eas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5786 chr2R 16864472 16864596 + 82 NA promoter-TSS (FBgn0034564) protein_coding-promoter-TSS (FBgn0034564) -27 FBgn0034564 FBgn0034564 FBtr0071520 CG9344 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9547 chr3R 5063401 5063488 + 82 NA promoter-TSS (FBgn0003165) protein_coding-promoter-TSS (FBgn0003165) 2545 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8546 chr3L 19085702 19085792 + 82 NA promoter-TSS (FBgn0036846) protein_coding-promoter-TSS (FBgn0036846) -23 FBgn0036846 FBgn0036846 FBtr0330090 MESR6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8400 chr3L 17571144 17571411 + 81 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -12015 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8574 chr3L 19680450 19680593 + 81 NA promoter-TSS (FBgn0004623) protein_coding-promoter-TSS (FBgn0004623) -68 FBgn0036900 FBgn0036900 FBtr0331859 CG8765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13523 chrX 3999991 4000149 + 81 NA promoter-TSS (FBgn0026084) protein_coding-promoter-TSS (FBgn0026084) 1693 FBgn0000221 FBgn0000221 FBtr0070638 brn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7834 chr3L 12798162 12798250 + 81 NA promoter-TSS (FBgn0262714) protein_coding-promoter-TSS (FBgn0262714) 10 FBgn0260945 FBgn0260945 FBtr0300561 Atg1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3157 chr2L 20120961 20121386 + 81 NA Intergenic Intergenic 13750 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9442 chr3R 4095585 4095689 + 81 NA promoter-TSS (FBgn0037561) protein_coding-promoter-TSS (FBgn0037561) -33 FBgn0037561 FBgn0037561 FBtr0081866 CG9630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12445 chr3R 25598787 25598899 + 81 NA exon (FBgn0001297, exon 1 of 3) protein_coding-exon (FBgn0001297, exon 1 of 3) 7610 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10877 chr3R 14973249 14973335 + 81 NA exon (FBgn0261285, exon 1 of 5) protein_coding-exon (FBgn0261285, exon 1 of 5) 337 FBgn0261285 FBgn0261285 FBtr0330044 Ppcs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10581 chr3R 12882450 12882663 + 80 NA intron (FBgn0020493, intron 2 of 7) protein_coding-intron (FBgn0020493, intron 2 of 7) 2827 FBgn0020493 FBgn0020493 FBtr0083394 Dad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10545 chr3R 12695095 12695324 + 80 NA intron (FBgn0263610, intron 4 of 7) ncRNA-intron (FBgn0263610, intron 3 of 6) 13172 FBgn0262462 FBgn0262462 FBtr0304522 mir-iab-4 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10975 chr3R 15616655 15616808 + 80 NA promoter-TSS (FBgn0051215) tRNA-promoter-TSS (FBgn0051215) 37 FBgn0051215 FBgn0051215 FBtr0083793 tRNA:CR31215 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9434 chr3R 4007245 4007723 + 80 NA promoter-TSS (FBgn0001138) protein_coding-promoter-TSS (FBgn0001138) -320 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4488 chr2R 5817398 5817751 + 80 NA promoter-TSS (FBgn0011656) protein_coding-promoter-TSS (FBgn0011656) 19176 FBgn0033465 FBgn0033465 FBtr0308338 CG12140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13368 chrUextra 14301999 14302065 + 79 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1945 chr2L 14355080 14355189 + 79 NA promoter-TSS (FBgn0015791) protein_coding-promoter-TSS (FBgn0015791) -54 FBgn0261535 FBgn0261535 FBtr0080639 l(2)34Fd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3293 chr2L 20770437 20770656 + 79 NA promoter-TSS (FBgn0000251) protein_coding-promoter-TSS (FBgn0000251) -348 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4575 chr2R 6459605 6459880 + 78 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) 14349 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13387 chrUextra 22164705 22164886 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7310 chr3L 7426651 7426742 + 78 NA TTS (FBgn0014011) protein_coding-TTS (FBgn0014011) 1594 FBgn0014011 FBgn0014011 FBtr0076867 Rac2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7785 chr3L 12461164 12461412 + 78 NA promoter-TSS (FBgn0000625) protein_coding-promoter-TSS (FBgn0000625) -167 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1087 chr2L 8535161 8535276 + 78 NA promoter-TSS (FBgn0028394) protein_coding-promoter-TSS (FBgn0028394) 6077 FBgn0028394 FBgn0028394 FBtr0079689 CG17834 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10446 chr3R 12164263 12164400 + 78 NA promoter-TSS (FBgn0040271) protein_coding-promoter-TSS (FBgn0040271) -71 FBgn0040271 FBgn0040271 FBtr0083273 Sulf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13380 chrUextra 18119463 18119690 + 78 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8214 chr3L 16080589 16080687 + 78 NA promoter-TSS (FBgn0263602) protein_coding-promoter-TSS (FBgn0263602) -13 FBgn0263602 FBgn0263602 FBtr0075498 Taspase1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13555 chrX 5641298 5641386 + 77 NA promoter-TSS (FBgn0029798) protein_coding-promoter-TSS (FBgn0029798) -55 FBgn0261383 FBgn0261383 FBtr0070842 IntS6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7575 chr3L 10607527 10607719 + 77 NA Intergenic Intergenic 9053 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9790 chr3R 7045766 7045849 + 77 NA promoter-TSS (FBgn0037877) protein_coding-promoter-TSS (FBgn0037877) -41 FBgn0037877 FBgn0037877 FBtr0082368 CG6689 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7750 chr3L 12270675 12270771 + 77 NA promoter-TSS (FBgn0036273) protein_coding-promoter-TSS (FBgn0036273) -372 FBgn0036272 FBgn0036272 FBtr0076010 CG4300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8397 chr3L 17556617 17557201 + 77 NA intron (FBgn0000567, intron 7 of 7) protein_coding-intron (FBgn0000567, intron 7 of 7) 2353 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7392 chr3L 8339861 8339962 + 77 NA promoter-TSS (FBgn0035879) protein_coding-promoter-TSS (FBgn0035879) 250 FBgn0035879 FBgn0035879 FBtr0076605 CG7112 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8298 chr3L 16776046 16776119 + 77 NA promoter-TSS (FBgn0036662) protein_coding-promoter-TSS (FBgn0036662) -274 FBgn0036662 FBgn0036662 FBtr0075327 CG9706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8254 chr3L 16371620 16371736 + 76 NA promoter-TSS (FBgn0036621) protein_coding-promoter-TSS (FBgn0036621) 72 FBgn0036621 FBgn0036621 FBtr0331173 roq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13347 chrUextra 6950249 6950372 + 76 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8396 chr3L 17526479 17526670 + 76 NA promoter-TSS (FBgn0259174) protein_coding-promoter-TSS (FBgn0259174) 3393 FBgn0259174 FBgn0259174 FBtr0299642 Nedd4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9513 chr3R 4637556 4637639 + 76 NA intron (FBgn0037635, intron 1 of 1) protein_coding-intron (FBgn0037635, intron 1 of 1) -2064 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7350 chr3L 7860618 7860709 + 76 NA promoter-TSS (FBgn0016694) protein_coding-promoter-TSS (FBgn0016694) -194 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9614 chr3R 5580381 5580466 + 76 NA promoter-TSS (FBgn0037741) protein_coding-promoter-TSS (FBgn0037741) -15 FBgn0037741 FBgn0037741 FBtr0082166 CG16908 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5771 chr2R 16758202 16758299 + 76 NA promoter-TSS (FBgn0050295) protein_coding-promoter-TSS (FBgn0050295) -46 FBgn0050295 FBgn0050295 FBtr0071515 Ipk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4883 chr2R 8896728 8897076 + 75 NA Intergenic Intergenic 12896 FBgn0008654 FBgn0008654 FBtr0087793 Su(z)2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11178 chr3R 16981668 16981778 + 75 NA promoter-TSS (FBgn0264357) protein_coding-promoter-TSS (FBgn0264357) -361 FBgn0264357 FBgn0264357 FBtr0110937 SNF4Agamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13834 chrX 20264750 20264860 + 75 NA promoter-TSS (FBgn0031106) protein_coding-promoter-TSS (FBgn0031106) 2 FBgn0031106 FBgn0031106 FBtr0077330 Syx16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9447 chr3R 4134360 4134448 + 75 NA promoter-TSS (FBgn0037569) protein_coding-promoter-TSS (FBgn0037569) -60 FBgn0037569 FBgn0037569 FBtr0081861 tex protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9961 chr3R 8538063 8538136 + 75 NA promoter-TSS (FBgn0002905) protein_coding-promoter-TSS (FBgn0002905) -78 FBgn0002905 FBgn0002905 FBtr0082662 mus308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13608 chrX 8468216 8468315 + 75 NA promoter-TSS (FBgn0030052) protein_coding-promoter-TSS (FBgn0030052) -72 FBgn0030052 FBgn0030052 FBtr0300751 CG12065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10952 chr3R 15466958 15467046 + 74 NA promoter-TSS (FBgn0038721) protein_coding-promoter-TSS (FBgn0038721) 1458 FBgn0038721 FBgn0038721 FBtr0083806 CG16718 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5217 chr2R 11736033 11736130 + 74 NA promoter-TSS (FBgn0034046) protein_coding-promoter-TSS (FBgn0034046) -30 FBgn0034046 FBgn0034046 FBtr0087287 tun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12898 chr3RHet 2136624 2136847 + 74 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8626 chr3L 21027570 21027675 + 74 NA promoter-TSS (FBgn0026179) protein_coding-promoter-TSS (FBgn0026179) -319 FBgn0037046 FBgn0037046 FBtr0078326 CG10581 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8280 chr3L 16577320 16577418 + 74 NA promoter-TSS (FBgn0250814) protein_coding-promoter-TSS (FBgn0250814) -4 FBgn0250814 FBgn0250814 FBtr0331557 CG4169 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8034 chr3L 14265919 14266043 + 74 NA Intergenic Intergenic -1462 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5031 chr2R 10143912 10144010 + 73 NA promoter-TSS (FBgn0033918) protein_coding-promoter-TSS (FBgn0033918) -5 FBgn0033918 FBgn0033918 FBtr0087538 CG8531 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2330 chr2L 15747584 15747676 + 73 NA intron (FBgn0010382, intron 1 of 5) protein_coding-intron (FBgn0010382, intron 1 of 5) -1021 FBgn0010382 FBgn0010382 FBtr0080777 CycE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_362 chr2L 2031673 2031788 + 73 NA promoter-TSS (FBgn0011860) tRNA-promoter-TSS (FBgn0011860) 38 FBgn0011860 FBgn0011860 FBtr0077821 tRNA:G3:22BCb tRNA Nup98-S2-pascual-garcia2017_R1_peak_13708 chrX 13232283 13232383 + 73 NA promoter-TSS (FBgn0030474) protein_coding-promoter-TSS (FBgn0030474) -54 FBgn0030474 FBgn0030474 FBtr0073766 CG15747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11793 chr3R 23079122 23079222 + 73 NA promoter-TSS (FBgn0011289) protein_coding-promoter-TSS (FBgn0011289) 20 FBgn0011289 FBgn0011289 FBtr0085156 TfIIA-L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5408 chr2R 13585820 13585968 + 73 NA promoter-TSS (FBgn0045800) ncRNA-promoter-TSS (FBgn0045800) -28 FBgn0027872 FBgn0027872 FBtr0086888 rdgBbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_475 chr2L 3172991 3173121 + 73 NA promoter-TSS (FBgn0031512) protein_coding-promoter-TSS (FBgn0031512) 28 FBgn0011984 FBgn0011984 FBtr0077613 tRNA:S7:23Ea tRNA Nup98-S2-pascual-garcia2017_R1_peak_13257 chrU 5301799 5301860 + 73 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13410 chrUextra 28090604 28090664 + 73 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_447 chr2L 2855734 2855810 + 72 NA promoter-TSS (FBgn0015521) protein_coding-promoter-TSS (FBgn0015521) -298 FBgn0015521 FBgn0015521 FBtr0273293 RpS21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11389 chr3R 19603679 19604695 + 72 NA exon (FBgn0039120, exon 2 of 9) protein_coding-exon (FBgn0039120, exon 2 of 9) 2944 FBgn0039120 FBgn0039120 FBtr0304567 Nup98-96 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8077 chr3L 14667423 14667553 + 72 NA promoter-TSS (FBgn0011928) tRNA-promoter-TSS (FBgn0011928) 44 FBgn0011928 FBgn0011928 FBtr0075681 tRNA:M3:70Fb tRNA Nup98-S2-pascual-garcia2017_R1_peak_5010 chr2R 9851162 9851245 + 72 NA promoter-TSS (FBgn0261975) protein_coding-promoter-TSS (FBgn0261975) -970 FBgn0261975 FBgn0261975 FBtr0304022 CG42806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7688 chr3L 11788650 11788733 + 72 NA promoter-TSS (FBgn0004381) protein_coding-promoter-TSS (FBgn0004381) -23 FBgn0004381 FBgn0004381 FBtr0332129 Klp68D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13728 chrX 13739885 13740049 + 72 NA promoter-TSS (FBgn0052626) protein_coding-promoter-TSS (FBgn0052626) -7836 FBgn0052626 FBgn0052626 FBtr0073833 CG32626 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13663 chrX 12097690 12097872 + 72 NA promoter-TSS (FBgn0259240) protein_coding-promoter-TSS (FBgn0259240) -84 FBgn0259240 FBgn0259240 FBtr0299858 Ten-a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6911 chr3L 2244182 2244341 + 72 NA promoter-TSS (FBgn0052301) protein_coding-promoter-TSS (FBgn0052301) -217 FBgn0052301 FBgn0052301 FBtr0332663 CG32301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13790 chrX 17715706 17715809 + 72 NA exon (FBgn0030869, exon 9 of 9) protein_coding-exon (FBgn0030869, exon 9 of 9) -2039 FBgn0030868 FBgn0030868 FBtr0074474 CG12986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8420 chr3L 17662348 17662478 + 72 NA promoter-TSS (FBgn0036746) protein_coding-promoter-TSS (FBgn0036746) -79 FBgn0036746 FBgn0036746 FBtr0075196 TORC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11391 chr3R 19644926 19645111 + 72 NA promoter-TSS (FBgn0053111) protein_coding-promoter-TSS (FBgn0053111) -64 FBgn0053111 FBgn0053111 FBtr0084530 CG33111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10013 chr3R 8836994 8837085 + 72 NA promoter-TSS (FBgn0020496) protein_coding-promoter-TSS (FBgn0020496) -29 FBgn0038110 FBgn0038110 FBtr0082719 CG8031 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7460 chr3L 8979746 8979842 + 72 NA promoter-TSS (FBgn0035951) protein_coding-promoter-TSS (FBgn0035951) -16 FBgn0035951 FBgn0035951 FBtr0076519 CG5068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7414 chr3L 8500240 8500424 + 72 NA promoter-TSS (FBgn0262719) protein_coding-promoter-TSS (FBgn0262719) -86 FBgn0262719 FBgn0262719 FBtr0308608 CG43163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13707 chrX 13231692 13231792 + 71 NA promoter-TSS (FBgn0030474) protein_coding-promoter-TSS (FBgn0030474) -67 FBgn0010198 FBgn0010198 FBtr0073795 RpS15Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_732 chr2L 5240749 5240846 + 71 NA promoter-TSS (FBgn0051971) tRNA-promoter-TSS (FBgn0051971) 31 FBgn0051971 FBgn0051971 FBtr0079064 tRNA:CR31971 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6711 chr3L 377931 378407 + 71 NA promoter-TSS (FBgn0262139) protein_coding-promoter-TSS (FBgn0262139) -853 FBgn0262139 FBgn0262139 FBtr0333902 trh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4289 chr2R 4487438 4487555 + 71 NA promoter-TSS (FBgn0033310) protein_coding-promoter-TSS (FBgn0033310) -60 FBgn0033309 FBgn0033309 FBtr0088730 CG8735 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13460 chrX 1511001 1511327 + 71 NA intron (FBgn0000210, intron 2 of 8) protein_coding-intron (FBgn0000210, intron 1 of 7) 1024 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3153 chr2L 20104582 20104735 + 71 NA promoter-TSS (FBgn0032851) protein_coding-promoter-TSS (FBgn0032851) -568 FBgn0032851 FBgn0032851 FBtr0089388 CG13970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13500 chrX 3028771 3028916 + 71 NA promoter-TSS (FBgn0004647) protein_coding-promoter-TSS (FBgn0004647) -62 FBgn0004647 FBgn0004647 FBtr0304659 N protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11420 chr3R 20353717 20353803 + 71 NA promoter-TSS (FBgn0039204) protein_coding-promoter-TSS (FBgn0039204) -38 FBgn0039204 FBgn0039204 FBtr0084644 CG6607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7105 chr3L 5746005 5746102 + 71 NA promoter-TSS (FBgn0016756) protein_coding-promoter-TSS (FBgn0016756) -20 FBgn0016756 FBgn0016756 FBtr0077096 Ubp64E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13801 chrX 18176456 18176669 + 71 NA intron (FBgn0053542, intron 3 of 3) protein_coding-intron (FBgn0053542, intron 3 of 3) 5296 FBgn0053542 FBgn0053542 FBtr0113465 upd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13274 chrU 6904906 6904973 + 71 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_37 chr2L 414729 414826 + 71 NA promoter-TSS (FBgn0263933) protein_coding-promoter-TSS (FBgn0263933) -290 FBgn0263933 FBgn0263933 FBtr0078055 ebi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8538 chr3L 18993695 18993769 + 71 NA promoter-TSS (FBgn0036838) protein_coding-promoter-TSS (FBgn0036838) -24 FBgn0036838 FBgn0036838 FBtr0075041 CG3808 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5021 chr2R 10061099 10061194 + 70 NA promoter-TSS (FBgn0000289) protein_coding-promoter-TSS (FBgn0000289) -13 FBgn0033907 FBgn0033907 FBtr0087578 mRpS16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1351 chr2L 9540121 9540215 + 70 NA promoter-TSS (FBgn0032124) protein_coding-promoter-TSS (FBgn0032124) -463 FBgn0032124 FBgn0032124 FBtr0079830 CG17855 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12266 chr3R 24948563 24948661 + 70 NA promoter-TSS (FBgn0039637) protein_coding-promoter-TSS (FBgn0039637) -11 FBgn0005596 FBgn0005596 FBtr0330292 yemalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11424 chr3R 20412277 20412542 + 70 NA intron (FBgn0263490, intron 1 of 4) protein_coding-intron (FBgn0263490, intron 1 of 5) 1034 FBgn0263490 FBgn0263490 FBtr0304914 mld protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13576 chrX 6266915 6266980 + 70 NA promoter-TSS (FBgn0003139) protein_coding-promoter-TSS (FBgn0003139) 1 FBgn0003139 FBgn0003139 FBtr0331432 PpV protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13732 chrX 13783031 13783125 + 70 NA intron (FBgn0263115, intron 3 of 7) protein_coding-intron (FBgn0263115, intron 2 of 4) -31921 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10638 chr3R 13372214 13372295 + 69 NA promoter-TSS (FBgn0038519) protein_coding-promoter-TSS (FBgn0038519) -23 FBgn0038519 FBgn0038519 FBtr0083503 Prx3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9083 chr3R 1568439 1568527 + 69 NA promoter-TSS (FBgn0037371) protein_coding-promoter-TSS (FBgn0037371) 269 FBgn0027497 FBgn0027497 FBtr0078722 Madm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7790 chr3L 12497308 12497383 + 69 NA promoter-TSS (FBgn0027936) protein_coding-promoter-TSS (FBgn0027936) -47 FBgn0027936 FBgn0027936 FBtr0075958 vih protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8565 chr3L 19626228 19626430 + 69 NA promoter-TSS (FBgn0036896) protein_coding-promoter-TSS (FBgn0036896) -133 FBgn0036896 FBgn0036896 FBtr0302513 wnd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4602 chr2R 6726208 6726288 + 69 NA promoter-TSS (FBgn0027525) protein_coding-promoter-TSS (FBgn0027525) -17 FBgn0027525 FBgn0027525 FBtr0088245 CG7686 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10138 chr3R 9727321 9727491 + 69 NA promoter-TSS (FBgn0000576) protein_coding-promoter-TSS (FBgn0000576) -175 FBgn0000576 FBgn0000576 FBtr0082863 ems protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2451 chr2L 16310709 16310785 + 69 NA promoter-TSS (FBgn0001086) protein_coding-promoter-TSS (FBgn0001086) -65 FBgn0000339 FBgn0000339 FBtr0080849 cni protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7347 chr3L 7803107 7803204 + 69 NA promoter-TSS (FBgn0052369) protein_coding-promoter-TSS (FBgn0052369) -230 FBgn0052369 FBgn0052369 FBtr0076783 CG32369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5248 chr2R 12037564 12037668 + 69 NA promoter-TSS (FBgn0034081) protein_coding-promoter-TSS (FBgn0034081) -12 FBgn0034083 FBgn0034083 FBtr0302084 lbk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7026 chr3L 4170307 4170385 + 68 NA promoter-TSS (FBgn0261274) protein_coding-promoter-TSS (FBgn0261274) -58 FBgn0261274 FBgn0261274 FBtr0073217 Ero1L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11175 chr3R 16941912 16941997 + 68 NA promoter-TSS (FBgn0010770) protein_coding-promoter-TSS (FBgn0010770) -22 FBgn0010770 FBgn0010770 FBtr0084012 ppan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4694 chr2R 7469607 7469824 + 68 NA intron (FBgn0033636, intron 11 of 15) protein_coding-intron (FBgn0033636, intron 12 of 16) 6121 FBgn0082993 FBgn0082993 FBtr0113499 snoRNA:Psi28S-1936 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_11423 chr3R 20410869 20410962 + 68 NA promoter-TSS (FBgn0039210) protein_coding-promoter-TSS (FBgn0039210) -33 FBgn0039210 FBgn0039210 FBtr0084671 CG13625 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7087 chr3L 5359264 5359352 + 68 NA promoter-TSS (FBgn0260856) protein_coding-promoter-TSS (FBgn0260856) -247 FBgn0260856 FBgn0260856 FBtr0077145 membrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9838 chr3R 7505363 7505443 + 68 NA promoter-TSS (FBgn0037933) protein_coding-promoter-TSS (FBgn0037933) 5 FBgn0011290 FBgn0011290 FBtr0082442 Taf12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3021 chr2L 19361915 19362100 + 68 NA intron (FBgn0024245, intron 1 of 3) protein_coding-intron (FBgn0024245, intron 1 of 3) 1217 FBgn0024245 FBgn0024245 FBtr0081224 dnt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4481 chr2R 5730007 5730102 + 68 NA promoter-TSS (FBgn0033453) protein_coding-promoter-TSS (FBgn0033453) -40 FBgn0033452 FBgn0033452 FBtr0089394 CG1599 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4124 chr2R 3188305 3188444 + 67 NA TTS (FBgn0003174) protein_coding-TTS (FBgn0003174) -10539 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10132 chr3R 9700817 9701065 + 67 NA promoter-TSS (FBgn0008646) protein_coding-promoter-TSS (FBgn0008646) -303 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2499 chr2L 16637508 16637608 + 67 NA intron (FBgn0259735, intron 3 of 5) protein_coding-intron (FBgn0259735, intron 2 of 4) -19557 FBgn0259735 FBgn0259735 FBtr0300005 CG42389 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11312 chr3R 18222896 18222995 + 67 NA promoter-TSS (FBgn0051166) tRNA-promoter-TSS (FBgn0051166) 38 FBgn0051167 FBgn0051167 FBtr0084232 tRNA:CR31167 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1428 chr2L 10200977 10201060 + 67 NA promoter-TSS (FBgn0005593) protein_coding-promoter-TSS (FBgn0005593) -46 FBgn0032189 FBgn0032189 FBtr0079962 Ripalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9197 chr3R 2472516 2472642 + 67 NA promoter-TSS (FBgn0010355) protein_coding-promoter-TSS (FBgn0010355) -32 FBgn0010355 FBgn0010355 FBtr0304903 Taf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_887 chr2L 6480491 6480574 + 67 NA promoter-TSS (FBgn0031820) protein_coding-promoter-TSS (FBgn0031820) -43 FBgn0086357 FBgn0086357 FBtr0079266 Sec61alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5772 chr2R 16772044 16772164 + 66 NA exon (FBgn0015524, exon 6 of 6) protein_coding-exon (FBgn0015524, exon 6 of 6) 4669 FBgn0034558 FBgn0034558 FBtr0304717 CG9236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1652 chr2L 12543328 12543482 + 66 NA exon (FBgn0261709, exon 1 of 2) ncRNA-exon (FBgn0261709, exon 1 of 2) 229 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4390 chr2R 5004044 5004123 + 66 NA promoter-TSS (FBgn0003612) protein_coding-promoter-TSS (FBgn0003612) 452 FBgn0003612 FBgn0003612 FBtr0088578 Su(var)2-10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12293 chr3R 25145312 25145385 + 66 NA promoter-TSS (FBgn0015622) protein_coding-promoter-TSS (FBgn0015622) -12 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6949 chr3L 2774272 2774391 + 66 NA promoter-TSS (FBgn0044452) protein_coding-promoter-TSS (FBgn0044452) -7 FBgn0044452 FBgn0044452 FBtr0333441 Atg2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13824 chrX 19102217 19102300 + 66 NA promoter-TSS (FBgn0027603) protein_coding-promoter-TSS (FBgn0027603) -41 FBgn0027603 FBgn0027603 FBtr0074693 Ulp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5349 chr2R 13032781 13032845 + 66 NA promoter-TSS (FBgn0050235) tRNA-promoter-TSS (FBgn0050235) 8 FBgn0050235 FBgn0050235 FBtr0086988 tRNA:CR30235 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5790 chr2R 16887628 16887755 + 66 NA promoter-TSS (FBgn0034570) protein_coding-promoter-TSS (FBgn0034570) 3966 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4045 chr2R 2077703 2077960 + 66 NA promoter-TSS (FBgn0011934) tRNA-promoter-TSS (FBgn0011934) -46 FBgn0011934 FBgn0011934 FBtr0085989 tRNA:N5:42Ad tRNA Nup98-S2-pascual-garcia2017_R1_peak_12580 chr3R 26738150 26738731 + 66 NA promoter-TSS (FBgn0020912) protein_coding-promoter-TSS (FBgn0020912) -170 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4655 chr2R 7258639 7258731 + 66 NA promoter-TSS (FBgn0021795) protein_coding-promoter-TSS (FBgn0021795) -10 FBgn0021795 FBgn0021795 FBtr0088153 Tapdelta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7584 chr3L 10657728 10657912 + 65 NA promoter-TSS (FBgn0010762) protein_coding-promoter-TSS (FBgn0010762) -19 FBgn0010762 FBgn0010762 FBtr0331573 simj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13492 chrX 2540133 2540252 + 65 NA promoter-TSS (FBgn0003371) protein_coding-promoter-TSS (FBgn0003371) 3142 FBgn0003371 FBgn0003371 FBtr0112828 sgg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4938 chr2R 9318204 9318586 + 65 NA promoter-TSS (FBgn0011882) tRNA-promoter-TSS (FBgn0011882) -75 FBgn0011909 FBgn0011909 FBtr0089303 tRNA:L3:49Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_10682 chr3R 13637169 13637309 + 65 NA promoter-TSS (FBgn0038552) protein_coding-promoter-TSS (FBgn0038552) -27 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11412 chr3R 20097012 20097119 + 64 NA promoter-TSS (FBgn0011225) protein_coding-promoter-TSS (FBgn0011225) -112 FBgn0011225 FBgn0011225 FBtr0301369 jar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_456 chr2L 2987690 2987776 + 64 NA promoter-TSS (FBgn0025109) protein_coding-promoter-TSS (FBgn0025109) -10 FBgn0250786 FBgn0250786 FBtr0305980 Chd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4833 chr2R 8523627 8523729 + 64 NA promoter-TSS (FBgn0011604) protein_coding-promoter-TSS (FBgn0011604) -32 FBgn0061360 FBgn0061360 FBtr0091651 CG33672 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9040 chr3R 1193988 1194071 + 64 NA promoter-TSS (FBgn0037315) protein_coding-promoter-TSS (FBgn0037315) -1233 FBgn0085306 FBgn0085306 FBtr0332160 CG34277 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7408 chr3L 8435454 8435563 + 64 NA promoter-TSS (FBgn0263352) protein_coding-promoter-TSS (FBgn0263352) -3718 FBgn0263352 FBgn0263352 FBtr0076661 Unr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_714 chr2L 4997818 4997891 + 64 NA promoter-TSS (FBgn0053113) protein_coding-promoter-TSS (FBgn0053113) 7074 FBgn0053113 FBgn0053113 FBtr0301538 Rtnl1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13807 chrX 18264822 18264950 + 64 NA promoter-TSS (FBgn0014467) protein_coding-promoter-TSS (FBgn0014467) -735 FBgn0263769 FBgn0263769 FBtr0310488 CR43686 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7107 chr3L 5763948 5764105 + 64 NA promoter-TSS (FBgn0260936) protein_coding-promoter-TSS (FBgn0260936) -239 FBgn0260936 FBgn0260936 FBtr0330127 scny protein_coding Nup98-S2-pascual-garcia2017_R1_peak_358 chr2L 2010872 2010984 + 63 NA promoter-TSS (FBgn0051940) tRNA-promoter-TSS (FBgn0051940) 12 FBgn0051940 FBgn0051940 FBtr0077861 tRNA:CR31940 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4313 chr2R 4647265 4647327 + 63 NA TTS (FBgn0027585) protein_coding-TTS (FBgn0027585) 22421 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10443 chr3R 12050480 12050588 + 63 NA promoter-TSS (FBgn0040071) protein_coding-promoter-TSS (FBgn0040071) -18007 FBgn0040071 FBgn0040071 FBtr0083258 tara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4098 chr2R 2859116 2859230 + 63 NA promoter-TSS (FBgn0053558) protein_coding-promoter-TSS (FBgn0053558) -31 FBgn0053558 FBgn0053558 FBtr0332944 mim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13678 chrX 12649725 12649855 + 63 NA Intergenic Intergenic 4860 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5070 chr2R 10505580 10505706 + 63 NA promoter-TSS (FBgn0010638) protein_coding-promoter-TSS (FBgn0010638) -93 FBgn0026427 FBgn0026427 FBtr0087502 Su(var)2-HP2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11440 chr3R 20696555 20696647 + 62 NA promoter-TSS (FBgn0015625) protein_coding-promoter-TSS (FBgn0015625) 16 FBgn0015625 FBgn0015625 FBtr0084728 CycB3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11490 chr3R 21707657 21707740 + 62 NA promoter-TSS (FBgn0039381) protein_coding-promoter-TSS (FBgn0039381) -9 FBgn0039381 FBgn0039381 FBtr0084911 Sppl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10908 chr3R 15228801 15228877 + 62 NA promoter-TSS (FBgn0038704) protein_coding-promoter-TSS (FBgn0038704) 31 FBgn0086613 FBgn0086613 FBtr0083771 Ino80 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7607 chr3L 10732732 10732859 + 62 NA Intergenic Intergenic -32297 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5028 chr2R 10104111 10104181 + 62 NA promoter-TSS (FBgn0033912) protein_coding-promoter-TSS (FBgn0033912) -14 FBgn0033912 FBgn0033912 FBtr0087575 RpS23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4032 chr2R 2008004 2008076 + 62 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) 11306 FBgn0000546 FBgn0000546 FBtr0086011 EcR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11322 chr3R 18406383 18406499 + 62 NA promoter-TSS (FBgn0028837) protein_coding-promoter-TSS (FBgn0028837) -56 FBgn0028837 FBgn0028837 FBtr0084265 CSN6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13508 chrX 3299548 3299783 + 62 NA intron (FBgn0029657, intron 3 of 4) protein_coding-intron (FBgn0029657, intron 2 of 3) 21891 FBgn0052493 FBgn0052493 FBtr0070533 tRNA:CR32493 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11747 chr3R 22773266 22773347 + 62 NA promoter-TSS (FBgn0039463) protein_coding-promoter-TSS (FBgn0039463) -1 FBgn0051070 FBgn0051070 FBtr0085086 tRNA:CR31070 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12356 chr3R 25381896 25382058 + 62 NA promoter-TSS (FBgn0000492) protein_coding-promoter-TSS (FBgn0000492) -132 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13036 chrM 4592 4793 + 61 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10155 chr3R 9881879 9881970 + 61 NA promoter-TSS (FBgn0038197) protein_coding-promoter-TSS (FBgn0038197) -766 FBgn0038197 FBgn0038197 FBtr0305052 foxo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4952 chr2R 9434499 9434576 + 61 NA promoter-TSS (FBgn0033853) protein_coding-promoter-TSS (FBgn0033853) 6129 FBgn0053156 FBgn0053156 FBtr0087684 CG33156 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_885 chr2L 6467669 6467803 + 61 NA promoter-TSS (FBgn0031817) protein_coding-promoter-TSS (FBgn0031817) -36 FBgn0031817 FBgn0031817 FBtr0331185 CG9531 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2641 chr2L 17243245 17243404 + 61 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 3965 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9746 chr3R 6719225 6719365 + 61 NA promoter-TSS (FBgn0037855) protein_coding-promoter-TSS (FBgn0037855) -43 FBgn0037855 FBgn0037855 FBtr0302935 CG6621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2971 chr2L 19114288 19114386 + 61 NA promoter-TSS (FBgn0002036) protein_coding-promoter-TSS (FBgn0002036) -64 FBgn0002036 FBgn0002036 FBtr0081155 CG10561 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6006 chr2R 18694588 18694682 + 61 NA promoter-TSS (FBgn0000405) protein_coding-promoter-TSS (FBgn0000405) -145 FBgn0000405 FBgn0000405 FBtr0071914 CycB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4627 chr2R 7089933 7090052 + 61 NA intron (FBgn0003396, intron 1 of 6) protein_coding-intron (FBgn0003396, intron 2 of 7) 16777 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3283 chr2L 20714615 20714788 + 61 NA promoter-TSS (FBgn0014859) protein_coding-promoter-TSS (FBgn0014859) -285 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8013 chr3L 14124873 14125032 + 61 NA promoter-TSS (FBgn0042630) protein_coding-promoter-TSS (FBgn0042630) -555 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8605 chr3L 20466469 20466537 + 61 NA promoter-TSS (FBgn0036998) protein_coding-promoter-TSS (FBgn0036998) -31 FBgn0052428 FBgn0052428 FBtr0078222 CG32428 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13563 chrX 5874958 5875042 + 61 NA intron (FBgn0029830, intron 2 of 9) protein_coding-intron (FBgn0029830, intron 2 of 9) -7845 FBgn0029831 FBgn0029831 FBtr0070866 CG5966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13751 chrX 15213422 15213520 + 60 NA promoter-TSS (FBgn0004924) protein_coding-promoter-TSS (FBgn0004924) 553 FBgn0263548 FBgn0263548 FBtr0309667 mir-4957 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6104 chr2R 19519852 19520188 + 60 NA promoter-TSS (FBgn0004795) protein_coding-promoter-TSS (FBgn0004795) -115 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8256 chr3L 16378963 16379030 + 60 NA promoter-TSS (FBgn0036624) protein_coding-promoter-TSS (FBgn0036624) -87 FBgn0036623 FBgn0036623 FBtr0075420 CG4729 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2680 chr2L 17384653 17384723 + 60 NA promoter-TSS (FBgn0032633) protein_coding-promoter-TSS (FBgn0032633) -327 FBgn0020503 FBgn0020503 FBtr0332452 CLIP-190 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7732 chr3L 12139549 12139648 + 60 NA promoter-TSS (FBgn0013997) protein_coding-promoter-TSS (FBgn0013997) -21 FBgn0013997 FBgn0013997 FBtr0075999 Nrx-IV protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7836 chr3L 12808939 12809049 + 60 NA intron (FBgn0260965, intron 1 of 10) protein_coding-intron (FBgn0260965, intron 1 of 9) 1640 FBgn0260965 FBgn0260965 FBtr0304053 CG42588 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1818 chr2L 13571992 13572082 + 60 NA intron (FBgn0259984, intron 3 of 11) protein_coding-intron (FBgn0259984, intron 3 of 12) 21873 FBgn0259984 FBgn0259984 FBtr0301412 kuz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10548 chr3R 12708193 12708573 + 60 NA intron (FBgn0263610, intron 3 of 7) ncRNA-intron (FBgn0263610, intron 2 of 6) -9749 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6824 chr3L 1368458 1368526 + 60 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -2136 FBgn0003295 FBgn0003295 FBtr0072681 ru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12221 chr3R 24670820 24671009 + 60 NA promoter-TSS (FBgn0015589) protein_coding-promoter-TSS (FBgn0015589) -108 FBgn0264324 FBgn0264324 FBtr0330305 spg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_926 chr2L 6817524 6817720 + 60 NA Intergenic Intergenic -4695 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7812 chr3L 12646395 12646502 + 59 NA promoter-TSS (FBgn0263379) ncRNA-promoter-TSS (FBgn0263379) -258 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6752 chr3L 640492 640666 + 59 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) -1680 FBgn0262451 FBgn0262451 FBtr0304469 ban pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8224 chr3L 16225118 16225188 + 59 NA promoter-TSS (FBgn0036580) protein_coding-promoter-TSS (FBgn0036580) -15 FBgn0036580 FBgn0036580 FBtr0075483 PDCD-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_762 chr2L 5461285 5461591 + 59 NA promoter-TSS (FBgn0261963) protein_coding-promoter-TSS (FBgn0261963) -203 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5059 chr2R 10345480 10345893 + 59 NA promoter-TSS (FBgn0261613) protein_coding-promoter-TSS (FBgn0261613) 22282 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5822 chr2R 17210811 17210925 + 59 NA promoter-TSS (FBgn0020306) protein_coding-promoter-TSS (FBgn0020306) -49 FBgn0050394 FBgn0050394 FBtr0071614 CG30394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13723 chrX 13534798 13534882 + 59 NA intron (FBgn0030505, intron 1 of 8) protein_coding-intron (FBgn0030505, intron 1 of 9) -4372 FBgn0030505 FBgn0030505 FBtr0301451 NFAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_316 chr2L 1614140 1614311 + 59 NA promoter-TSS (FBgn0021906) protein_coding-promoter-TSS (FBgn0021906) -43 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9789 chr3R 7023880 7023981 + 59 NA TTS (FBgn0037870) protein_coding-TTS (FBgn0037870) 2104 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13511 chrX 3440075 3440147 + 59 NA promoter-TSS (FBgn0085364) ncRNA-promoter-TSS (FBgn0085364) 32 FBgn0085364 FBgn0085364 FBtr0307366 CR34335 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4640 chr2R 7171430 7171532 + 59 NA promoter-TSS (FBgn0033608) protein_coding-promoter-TSS (FBgn0033608) -5 FBgn0033607 FBgn0033607 FBtr0332422 CG9062 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13520 chrX 3755256 3755466 + 59 NA exon (FBgn0019661, exon 1 of 1) ncRNA-exon (FBgn0019661, exon 1 of 1) 1097 FBgn0019661 FBgn0019661 FBtr0070634 roX1 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9630 chr3R 5754390 5754462 + 59 NA promoter-TSS (FBgn0263097) protein_coding-promoter-TSS (FBgn0263097) 54023 FBgn0263097 FBgn0263097 FBtr0114583 Glut4EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8600 chr3L 20306686 20306773 + 59 NA promoter-TSS (FBgn0250791) protein_coding-promoter-TSS (FBgn0250791) -3 FBgn0250791 FBgn0250791 FBtr0074840 Snap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11200 chr3R 17234264 17234332 + 59 NA promoter-TSS (FBgn0051438) protein_coding-promoter-TSS (FBgn0051438) -547 FBgn0051438 FBgn0051438 FBtr0084090 CheB93b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11746 chr3R 22771078 22771239 + 59 NA promoter-TSS (FBgn0039462) protein_coding-promoter-TSS (FBgn0039462) -98 FBgn0039462 FBgn0039462 FBtr0085067 CG14252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9424 chr3R 3965928 3966036 + 59 NA promoter-TSS (FBgn0011962) tRNA-promoter-TSS (FBgn0011962) 35 FBgn0011962 FBgn0011962 FBtr0081812 tRNA:R2:84Fd tRNA Nup98-S2-pascual-garcia2017_R1_peak_13397 chrUextra 24365787 24365887 + 59 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7108 chr3L 5787229 5787331 + 58 NA promoter-TSS (FBgn0086694) protein_coding-promoter-TSS (FBgn0086694) 12 FBgn0086694 FBgn0086694 FBtr0077116 Bre1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_884 chr2L 6412073 6412192 + 58 NA promoter-TSS (FBgn0031811) protein_coding-promoter-TSS (FBgn0031811) -183 FBgn0031811 FBgn0031811 FBtr0079256 CG13982 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11491 chr3R 21719133 21719234 + 58 NA promoter-TSS (FBgn0039385) protein_coding-promoter-TSS (FBgn0039385) -36 FBgn0039385 FBgn0039385 FBtr0084938 CG5913 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13719 chrX 13392959 13393024 + 58 NA intron (FBgn0052635, intron 4 of 10) protein_coding-intron (FBgn0052635, intron 4 of 10) -21545 FBgn0030491 FBgn0030491 FBtr0273441 CG15753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13352 chrUextra 8511088 8511335 + 58 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7973 chr3L 13838506 13838621 + 58 NA promoter-TSS (FBgn0029167) protein_coding-promoter-TSS (FBgn0029167) -591 FBgn0029167 FBgn0029167 FBtr0333020 Hml protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13713 chrX 13307071 13307189 + 58 NA promoter-TSS (FBgn0030486) protein_coding-promoter-TSS (FBgn0030486) -145 FBgn0030486 FBgn0030486 FBtr0301559 Set2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10582 chr3R 12905904 12905966 + 58 NA promoter-TSS (FBgn0038476) protein_coding-promoter-TSS (FBgn0038476) -270 FBgn0038475 FBgn0038475 FBtr0083423 Keap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7585 chr3L 10674017 10674270 + 57 NA intron (FBgn0010762, intron 1 of 8) protein_coding-intron (FBgn0010762, intron 2 of 9) -9981 FBgn0036099 FBgn0036099 FBtr0076265 CG11811 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11437 chr3R 20613110 20613204 + 57 NA promoter-TSS (FBgn0039223) protein_coding-promoter-TSS (FBgn0039223) -5 FBgn0039223 FBgn0039223 FBtr0084743 CG5805 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2934 chr2L 18796080 18796270 + 57 NA Intergenic Intergenic 9172 FBgn0264362 FBgn0264362 FBtr0332209 CG43814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13034 chrM 2821 2997 + 57 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13323 chrUextra 599600 599984 + 57 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5989 chr2R 18565624 18566110 + 57 NA Intergenic Intergenic 7610 FBgn0034763 FBgn0034763 FBtr0071868 RYBP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1070 chr2L 8403506 8403599 + 57 NA promoter-TSS (FBgn0020497) protein_coding-promoter-TSS (FBgn0020497) -23 FBgn0020497 FBgn0020497 FBtr0079663 emb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1075 chr2L 8478081 8478283 + 57 NA promoter-TSS (FBgn0262029) protein_coding-promoter-TSS (FBgn0262029) 833 FBgn0053194 FBgn0053194 FBtr0079676 CheA29a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13322 chrUextra 593226 593511 + 57 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4507 chr2R 6047353 6047730 + 57 NA intron (FBgn0033494, intron 1 of 16) protein_coding-intron (FBgn0033494, intron 1 of 16) -1452 FBgn0033495 FBgn0033495 FBtr0088370 CG12214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13414 chrUextra 28499140 28499196 + 57 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5750 chr2R 16554775 16554856 + 57 NA promoter-TSS (FBgn0034542) protein_coding-promoter-TSS (FBgn0034542) -1672 FBgn0034542 FBgn0034542 FBtr0086246 Fem-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9230 chr3R 2617241 2617421 + 56 NA promoter-TSS (FBgn0000439) protein_coding-promoter-TSS (FBgn0000439) -227 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4903 chr2R 9055536 9055625 + 56 NA promoter-TSS (FBgn0086532) protein_coding-promoter-TSS (FBgn0086532) -45 FBgn0033799 FBgn0033799 FBtr0310155 GLaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2157 chr2L 15060681 15060897 + 56 NA promoter-TSS (FBgn0010422) protein_coding-promoter-TSS (FBgn0010422) -32 FBgn0010422 FBgn0010422 FBtr0080722 TfIIS protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12265 chr3R 24938743 24938849 + 56 NA promoter-TSS (FBgn0039635) protein_coding-promoter-TSS (FBgn0039635) -31 FBgn0039635 FBgn0039635 FBtr0085368 CG11876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6141 chr2R 19727464 19727733 + 56 NA promoter-TSS (FBgn0086659) snoRNA-promoter-TSS (FBgn0086659) -11 FBgn0086659 FBgn0086659 FBtr0091917 snoRNA:Psi18S-176 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_842 chr2L 5999439 5999558 + 56 NA promoter-TSS (FBgn0031759) protein_coding-promoter-TSS (FBgn0031759) 3 FBgn0031759 FBgn0031759 FBtr0079232 lid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10160 chr3R 9924416 9924564 + 56 NA promoter-TSS (FBgn0038200) protein_coding-promoter-TSS (FBgn0038200) -688 FBgn0038200 FBgn0038200 FBtr0082917 CG9920 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7364 chr3L 8059133 8059205 + 56 NA promoter-TSS (FBgn0052362) tRNA-promoter-TSS (FBgn0052362) 7 FBgn0052362 FBgn0052362 FBtr0076740 tRNA:CR32362 tRNA Nup98-S2-pascual-garcia2017_R1_peak_695 chr2L 4810165 4810336 + 56 NA Intergenic Intergenic -2759 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_713 chr2L 4971448 4971539 + 56 NA promoter-TSS (FBgn0031659) protein_coding-promoter-TSS (FBgn0031659) -209 FBgn0031659 FBgn0031659 FBtr0078995 CG14043 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4303 chr2R 4620930 4621057 + 56 NA promoter-TSS (FBgn0086784) protein_coding-promoter-TSS (FBgn0086784) 816 FBgn0086784 FBgn0086784 FBtr0088716 stmA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1157 chr2L 8718101 8718178 + 56 NA intron (FBgn0003209, intron 1 of 8) protein_coding-intron (FBgn0003209, intron 1 of 8) 12567 FBgn0032061 FBgn0032061 FBtr0079731 CG9314 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4869 chr2R 8791894 8792245 + 56 NA Intergenic Intergenic -11433 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13662 chrX 11908317 11908405 + 55 NA promoter-TSS (FBgn0030362) protein_coding-promoter-TSS (FBgn0030362) -1177 FBgn0030362 FBgn0030362 FBtr0073578 regucalcin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13575 chrX 6246192 6246329 + 55 NA promoter-TSS (FBgn0261955) protein_coding-promoter-TSS (FBgn0261955) -54 FBgn0261955 FBgn0261955 FBtr0070907 kdn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7303 chr3L 7332528 7332604 + 55 NA promoter-TSS (FBgn0011640) protein_coding-promoter-TSS (FBgn0011640) 2 FBgn0011640 FBgn0011640 FBtr0076842 lark protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13033 chrM 1763 1951 + 55 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5395 chr2R 13469021 13469105 + 55 NA promoter-TSS (FBgn0034246) protein_coding-promoter-TSS (FBgn0034246) -32 FBgn0034246 FBgn0034246 FBtr0086904 Dcr-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12849 chr3RHet 790597 791187 + 55 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9650 chr3R 5926409 5926497 + 55 NA promoter-TSS (FBgn0262459) pre_miRNA-promoter-TSS (FBgn0262459) -221 FBgn0262459 FBgn0262459 FBtr0304500 mir-34 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10102 chr3R 9486220 9486322 + 55 NA promoter-TSS (FBgn0004587) protein_coding-promoter-TSS (FBgn0004587) -30 FBgn0004237 FBgn0004237 FBtr0300590 Hrb87F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13255 chrU 5299418 5299508 + 55 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3300 chr2L 20783195 20783433 + 55 NA TTS (FBgn0000251) protein_coding-TTS (FBgn0000251) -4335 FBgn0032884 FBgn0032884 FBtr0081414 Pomp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1816 chr2L 13514203 13514444 + 55 NA intron (FBgn0023407, intron 3 of 6) protein_coding-intron (FBgn0023407, intron 3 of 6) -13518 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1373 chr2L 9699733 9699828 + 55 NA promoter-TSS (FBgn0015393) protein_coding-promoter-TSS (FBgn0015393) -11 FBgn0015393 FBgn0015393 FBtr0079846 hoip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7062 chr3L 4840729 4840818 + 55 NA promoter-TSS (FBgn0035578) protein_coding-promoter-TSS (FBgn0035578) -677 FBgn0035578 FBgn0035578 FBtr0308822 CG13707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5100 chr2R 10686639 10686781 + 55 NA promoter-TSS (FBgn0001319) protein_coding-promoter-TSS (FBgn0001319) -2178 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11727 chr3R 22640115 22640178 + 55 NA intron (FBgn0262473, intron 2 of 4) protein_coding-intron (FBgn0262473, intron 1 of 3) 9912 FBgn0086060 FBgn0086060 FBtr0114336 snoRNA:Me28S-U1554 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1531 chr2L 11358627 11359382 + 55 NA exon (FBgn0000287, exon 1 of 7) protein_coding-exon (FBgn0000287, exon 1 of 7) 131 FBgn0000287 FBgn0000287 FBtr0080236 salr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13278 chrU 7638485 7638548 + 55 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8545 chr3L 19084924 19085012 + 54 NA promoter-TSS (FBgn0036846) protein_coding-promoter-TSS (FBgn0036846) -802 FBgn0036846 FBgn0036846 FBtr0330090 MESR6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_328 chr2L 1649921 1650100 + 54 NA Intergenic Intergenic -1248 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4820 chr2R 8324783 8324880 + 54 NA promoter-TSS (FBgn0033739) protein_coding-promoter-TSS (FBgn0033739) -9 FBgn0033739 FBgn0033739 FBtr0305076 Dyb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4345 chr2R 4815596 4815684 + 54 NA promoter-TSS (FBgn0033352) protein_coding-promoter-TSS (FBgn0033352) -30 FBgn0033351 FBgn0033351 FBtr0088676 CG8235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9792 chr3R 7047432 7047553 + 54 NA promoter-TSS (FBgn0020910) protein_coding-promoter-TSS (FBgn0020910) -124 FBgn0020910 FBgn0020910 FBtr0082347 RpL3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10447 chr3R 12185046 12185124 + 54 NA promoter-TSS (FBgn0038421) protein_coding-promoter-TSS (FBgn0038421) -45 FBgn0038421 FBgn0038421 FBtr0083323 CG17931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11967 chr3R 23773708 23773820 + 54 NA promoter-TSS (FBgn0039562) protein_coding-promoter-TSS (FBgn0039562) -33 FBgn0039561 FBgn0039561 FBtr0085266 mfrn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13774 chrX 16617532 16617663 + 54 NA intron (FBgn0052572, intron 2 of 3) protein_coding-intron (FBgn0052572, intron 2 of 3) -2157 FBgn0085354 FBgn0085354 FBtr0112527 CG34325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8176 chr3L 15830535 15830630 + 54 NA promoter-TSS (FBgn0036538) protein_coding-promoter-TSS (FBgn0036538) 0 FBgn0036538 FBgn0036538 FBtr0075536 CG15715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5575 chr2R 15029051 15029169 + 54 NA promoter-TSS (FBgn0000578) protein_coding-promoter-TSS (FBgn0000578) -2941 FBgn0263290 FBgn0263290 FBtr0308635 CR43399 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13388 chrUextra 22459742 22459797 + 54 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1287 chr2L 8958404 8958473 + 53 NA promoter-TSS (FBgn0032079) protein_coding-promoter-TSS (FBgn0032079) -2631 FBgn0032079 FBgn0032079 FBtr0303885 CG31886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1842 chr2L 13813770 13813846 + 53 NA promoter-TSS (FBgn0001965) protein_coding-promoter-TSS (FBgn0001965) -8 FBgn0001965 FBgn0001965 FBtr0080541 Sos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8377 chr3L 17332985 17333102 + 53 NA promoter-TSS (FBgn0052173) tRNA-promoter-TSS (FBgn0052173) 37 FBgn0052173 FBgn0052173 FBtr0075244 tRNA:CR32173 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1690 chr2L 12692910 12693019 + 53 NA promoter-TSS (FBgn0032445) protein_coding-promoter-TSS (FBgn0032445) -22 FBgn0032445 FBgn0032445 FBtr0300275 CG6153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2947 chr2L 18968709 18968784 + 53 NA promoter-TSS (FBgn0032728) protein_coding-promoter-TSS (FBgn0032728) -25 FBgn0015772 FBgn0015772 FBtr0081189 Nak protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4601 chr2R 6707411 6707512 + 53 NA promoter-TSS (FBgn0029134) protein_coding-promoter-TSS (FBgn0029134) -25 FBgn0029134 FBgn0029134 FBtr0088225 Prosbeta5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9111 chr3R 1834318 1834395 + 53 NA promoter-TSS (FBgn0003261) protein_coding-promoter-TSS (FBgn0003261) -55 FBgn0003261 FBgn0003261 FBtr0078654 Rm62 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13422 chrUextra 28734923 28734982 + 53 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12858 chr3RHet 1129168 1129239 + 53 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7998 chr3L 14046221 14046344 + 53 NA promoter-TSS (FBgn0052138) protein_coding-promoter-TSS (FBgn0052138) -37 FBgn0264718 FBgn0264718 FBtr0334052 CG43986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4708 chr2R 7548108 7548193 + 53 NA promoter-TSS (FBgn0011916) tRNA-promoter-TSS (FBgn0011916) -10 FBgn0011916 FBgn0011916 FBtr0088086 tRNA:M2:48Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_11768 chr3R 22895897 22896034 + 53 NA promoter-TSS (FBgn0003495) protein_coding-promoter-TSS (FBgn0003495) -173 FBgn0003495 FBgn0003495 FBtr0085146 spz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13542 chrX 5324468 5324567 + 53 NA promoter-TSS (FBgn0029766) protein_coding-promoter-TSS (FBgn0029766) -196 FBgn0029766 FBgn0029766 FBtr0070777 CG15784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3312 chr2L 20874725 20874788 + 53 NA intron (FBgn0263996, intron 8 of 10) protein_coding-intron (FBgn0032901, intron 8 of 10) 4902 FBgn0032900 FBgn0032900 FBtr0333010 CG14401 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_385 chr2L 2365279 2365389 + 53 NA promoter-TSS (FBgn0261647) protein_coding-promoter-TSS (FBgn0261647) -260 FBgn0261647 FBgn0261647 FBtr0330666 Axud1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9437 chr3R 4016632 4016834 + 53 NA Intergenic Intergenic 6700 FBgn0262994 FBgn0262994 FBtr0306837 CR43302 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_623 chr2L 4332771 4332854 + 53 NA TTS (FBgn0028482) protein_coding-TTS (FBgn0028482) -1114 FBgn0020762 FBgn0020762 FBtr0112898 Atet protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2479 chr2L 16533007 16533106 + 53 NA promoter-TSS (FBgn0032587) protein_coding-promoter-TSS (FBgn0032587) -4134 FBgn0086038 FBgn0086038 FBtr0114314 snoRNA:Me28S-C1237 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7731 chr3L 12131542 12131598 + 53 NA promoter-TSS (FBgn0036257) protein_coding-promoter-TSS (FBgn0036257) 3 FBgn0011455 FBgn0011455 FBtr0334094 l(3)neo18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5956 chr2R 18221946 18222052 + 52 NA TTS (FBgn0085237) protein_coding-TTS (FBgn0085237) 1368 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1039 chr2L 8031803 8031901 + 52 NA intron (FBgn0044323, intron 1 of 4) protein_coding-intron (FBgn0044323, intron 1 of 4) 1131 FBgn0044323 FBgn0044323 FBtr0079539 Cka protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4573 chr2R 6451706 6452204 + 52 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 6562 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6079 chr2R 19289819 19289904 + 52 NA promoter-TSS (FBgn0034859) protein_coding-promoter-TSS (FBgn0034859) -29 FBgn0034859 FBgn0034859 FBtr0072027 CG3520 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4698 chr2R 7492539 7492761 + 52 NA promoter-TSS (FBgn0033636) protein_coding-promoter-TSS (FBgn0033636) -209 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13655 chrX 11317608 11317704 + 52 NA promoter-TSS (FBgn0001145) protein_coding-promoter-TSS (FBgn0001145) -335 FBgn0001145 FBgn0001145 FBtr0073496 Gs2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11195 chr3R 17211983 17212094 + 52 NA Intergenic Intergenic -2567 FBgn0004862 FBgn0004862 FBtr0084087 bap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7997 chr3L 14044233 14044365 + 52 NA promoter-TSS (FBgn0036405) protein_coding-promoter-TSS (FBgn0036405) -7 FBgn0036405 FBgn0036405 FBtr0302433 CG6833 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13659 chrX 11415984 11416089 + 52 NA intron (FBgn0052666, intron 2 of 5) protein_coding-intron (FBgn0052666, intron 2 of 6) -25465 FBgn0262335 FBgn0262335 FBtr0304519 mir-2492 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13756 chrX 15604603 15604695 + 52 NA promoter-TSS (FBgn0030673) protein_coding-promoter-TSS (FBgn0030673) -479 FBgn0030673 FBgn0030673 FBtr0074055 CG15601 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9425 chr3R 3966724 3966786 + 52 NA promoter-TSS (FBgn0011959) tRNA-promoter-TSS (FBgn0011959) 9 FBgn0011959 FBgn0011959 FBtr0081809 tRNA:R2:84Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_9535 chr3R 4834107 4834194 + 52 NA promoter-TSS (FBgn0037654) protein_coding-promoter-TSS (FBgn0037654) -7 FBgn0037654 FBgn0037654 FBtr0081966 CG11983 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4862 chr2R 8771957 8772113 + 52 NA exon (FBgn0003975, exon 1 of 8) protein_coding-exon (FBgn0003975, exon 1 of 8) 329 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10616 chr3R 13211514 13211586 + 52 NA promoter-TSS (FBgn0262871) protein_coding-promoter-TSS (FBgn0262871) -76 FBgn0262871 FBgn0262871 FBtr0330037 lute protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5144 chr2R 11035295 11035407 + 52 NA promoter-TSS (FBgn0033994) protein_coding-promoter-TSS (FBgn0033994) -14 FBgn0033994 FBgn0033994 FBtr0300324 CG7544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13641 chrX 10219959 10220049 + 52 NA promoter-TSS (FBgn0030189) protein_coding-promoter-TSS (FBgn0030189) -493 FBgn0030189 FBgn0030189 FBtr0071441 CG2909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10660 chr3R 13526714 13526847 + 51 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) -13997 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1159 chr2L 8740644 8740720 + 51 NA promoter-TSS (FBgn0003209) protein_coding-promoter-TSS (FBgn0003209) -22 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13462 chrX 1519540 1519612 + 51 NA intron (FBgn0000210, intron 3 of 8) protein_coding-intron (FBgn0000210, intron 2 of 7) -7388 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7458 chr3L 8967569 8967645 + 51 NA promoter-TSS (FBgn0035947) protein_coding-promoter-TSS (FBgn0035947) -90 FBgn0086706 FBgn0086706 FBtr0076558 pix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7038 chr3L 4364068 4364173 + 51 NA promoter-TSS (FBgn0035534) protein_coding-promoter-TSS (FBgn0035534) -18 FBgn0035533 FBgn0035533 FBtr0306533 Cip4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11380 chr3R 19427090 19427204 + 51 NA promoter-TSS (FBgn0051143) tRNA-promoter-TSS (FBgn0051143) 30 FBgn0051143 FBgn0051143 FBtr0084482 tRNA:CR31143 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7429 chr3L 8691082 8691160 + 51 NA Intergenic Intergenic 22204 FBgn0011509 FBgn0011509 FBtr0076598 SrpRbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13561 chrX 5813037 5813145 + 51 NA intron (FBgn0029824, intron 1 of 6) protein_coding-intron (FBgn0029824, intron 1 of 6) 1881 FBgn0029824 FBgn0029824 FBtr0070858 CG3726 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_734 chr2L 5306440 5306521 + 51 NA intron (FBgn0016076, intron 1 of 2) protein_coding-intron (FBgn0016076, intron 1 of 2) 758 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7583 chr3L 10654086 10654153 + 51 NA promoter-TSS (FBgn0036096) protein_coding-promoter-TSS (FBgn0036096) -456 FBgn0036096 FBgn0036096 FBtr0076260 CG8003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12847 chr3RHet 789429 789489 + 51 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8404 chr3L 17583545 17584140 + 51 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -24580 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4704 chr2R 7519235 7519326 + 51 NA intron (FBgn0033638, intron 1 of 7) protein_coding-intron (FBgn0033638, intron 1 of 7) 9138 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9534 chr3R 4832152 4832209 + 51 NA promoter-TSS (FBgn0037653) protein_coding-promoter-TSS (FBgn0037653) 6 FBgn0037653 FBgn0037653 FBtr0081965 CG11982 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6740 chr3L 620996 621066 + 51 NA exon (FBgn0263042, exon 2 of 2) protein_coding-exon (FBgn0263042, exon 2 of 2) 1285 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12491 chr3R 25883955 25884021 + 51 NA promoter-TSS (FBgn0015542) protein_coding-promoter-TSS (FBgn0015542) -49 FBgn0015542 FBgn0015542 FBtr0114597 sima protein_coding Nup98-S2-pascual-garcia2017_R1_peak_758 chr2L 5421636 5421956 + 51 NA Intergenic Intergenic -10046 FBgn0263866 FBgn0263866 FBtr0329835 CR43713 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12267 chr3R 24948984 24949155 + 51 NA promoter-TSS (FBgn0039637) protein_coding-promoter-TSS (FBgn0039637) -69 FBgn0039637 FBgn0039637 FBtr0085373 CG11880 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4953 chr2R 9441501 9441573 + 51 NA promoter-TSS (FBgn0014877) protein_coding-promoter-TSS (FBgn0014877) -50 FBgn0014877 FBgn0014877 FBtr0087675 Roe1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8114 chr3L 15097443 15097544 + 50 NA intron (FBgn0262707, intron 1 of 3) protein_coding-intron (FBgn0262707, intron 1 of 3) -1489 FBgn0262707 FBgn0262707 FBtr0075635 CTPsyn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5412 chr2R 13654539 13654612 + 50 NA promoter-TSS (FBgn0263629) pre_miRNA-promoter-TSS (FBgn0263629) 137 FBgn0034277 FBgn0034277 FBtr0089559 CG6370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4301 chr2R 4611320 4611397 + 50 NA promoter-TSS (FBgn0005695) protein_coding-promoter-TSS (FBgn0005695) -223 FBgn0040777 FBgn0040777 FBtr0088720 CG14767 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4733 chr2R 7712723 7712830 + 50 NA promoter-TSS (FBgn0033653) protein_coding-promoter-TSS (FBgn0033653) -94 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13762 chrX 16041585 16042021 + 50 NA exon (FBgn0042650, exon 1 of 4) protein_coding-exon (FBgn0042650, exon 1 of 4) -23438 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13169 chrU 1393554 1393768 + 50 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8497 chr3L 18236820 18236897 + 50 NA Intergenic Intergenic -8330 FBgn0036783 FBgn0036783 FBtr0075129 CheA75a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5458 chr2R 14013291 14013367 + 50 NA promoter-TSS (FBgn0028983) protein_coding-promoter-TSS (FBgn0028983) 8 FBgn0003520 FBgn0003520 FBtr0301614 stau protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13778 chrX 16971956 16972117 + 50 NA promoter-TSS (FBgn0030813) protein_coding-promoter-TSS (FBgn0030813) -106 FBgn0030812 FBgn0030812 FBtr0310525 CG8949 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6908 chr3L 2237056 2237149 + 50 NA promoter-TSS (FBgn0040507) protein_coding-promoter-TSS (FBgn0040507) -26 FBgn0035318 FBgn0035318 FBtr0072909 CG9018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_326 chr2L 1643523 1643867 + 50 NA Intergenic Intergenic -7563 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4880 chr2R 8879208 8879496 + 50 NA Intergenic Intergenic -2050 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13345 chrUextra 5832336 5832396 + 50 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13398 chrUextra 25124676 25124732 + 50 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13116 chrU 261886 261970 + 50 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9244 chr3R 2675760 2675858 + 50 NA promoter-TSS (FBgn0003339) protein_coding-promoter-TSS (FBgn0003339) -106 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2949 chr2L 18987269 18987356 + 50 NA promoter-TSS (FBgn0032732) protein_coding-promoter-TSS (FBgn0032732) -36 FBgn0032731 FBgn0032731 FBtr0081185 CG10641 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9144 chr3R 2072861 2072950 + 49 NA Intergenic Intergenic -1809 FBgn0037414 FBgn0037414 FBtr0078597 Osi7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_354 chr2L 1972742 1972960 + 49 NA Intergenic Intergenic -1275 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9719 chr3R 6490841 6490960 + 49 NA Intergenic Intergenic 8732 FBgn0085333 FBgn0085333 FBtr0112500 CG34304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9544 chr3R 5052603 5053100 + 49 NA promoter-TSS (FBgn0003165) protein_coding-promoter-TSS (FBgn0003165) 13138 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8981 chr3R 661116 661269 + 49 NA Intergenic Intergenic -4173 FBgn0037284 FBgn0037284 FBtr0078873 CG14659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1496 chr2L 11130696 11130782 + 49 NA promoter-TSS (FBgn0032348) protein_coding-promoter-TSS (FBgn0032348) -2 FBgn0032348 FBgn0032348 FBtr0080200 CG4751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13644 chrX 10496308 10496640 + 49 NA promoter-TSS (FBgn0030218) protein_coding-promoter-TSS (FBgn0030218) -795 FBgn0030218 FBgn0030218 FBtr0071510 CG1628 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5009 chr2R 9844450 9844521 + 49 NA intron (FBgn0262739, intron 2 of 7) protein_coding-intron (FBgn0262739, intron 2 of 7) 1109 FBgn0262739 FBgn0262739 FBtr0087613 AGO1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_852 chr2L 6127637 6127705 + 49 NA promoter-TSS (FBgn0031782) protein_coding-promoter-TSS (FBgn0031782) -18 FBgn0031782 FBgn0031782 FBtr0333407 WDR79 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10805 chr3R 14409767 14409842 + 49 NA promoter-TSS (FBgn0023083) protein_coding-promoter-TSS (FBgn0023083) -1858 FBgn0023083 FBgn0023083 FBtr0290210 fray protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4290 chr2R 4487853 4487968 + 49 NA promoter-TSS (FBgn0033310) protein_coding-promoter-TSS (FBgn0033310) -28 FBgn0033310 FBgn0033310 FBtr0301542 rgr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4035 chr2R 2040086 2040213 + 49 NA promoter-TSS (FBgn0011938) tRNA-promoter-TSS (FBgn0011938) 32 FBgn0011938 FBgn0011938 FBtr0086016 tRNA:N5:42Ah tRNA Nup98-S2-pascual-garcia2017_R1_peak_6956 chr3L 2851995 2852064 + 49 NA intron (FBgn0263392, intron 3 of 9) protein_coding-intron (FBgn0263392, intron 3 of 9) 27129 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6704 chr3L 282099 282625 + 49 NA exon (FBgn0264707, exon 5 of 16) protein_coding-exon (FBgn0264707, exon 5 of 16) 4925 FBgn0264707 FBgn0264707 FBtr0333957 RhoGEF3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9836 chr3R 7474717 7474786 + 49 NA intron (FBgn0262081, intron 1 of 8) protein_coding-intron (FBgn0262081, intron 1 of 8) -1959 FBgn0037926 FBgn0037926 FBtr0082420 Elp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2008 chr2L 14518342 14518401 + 49 NA promoter-TSS (FBgn0011863) tRNA-promoter-TSS (FBgn0011863) 6 FBgn0011863 FBgn0011863 FBtr0080666 tRNA:G3:35Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4253 chr2R 4214403 4215272 + 49 NA promoter-TSS (FBgn0261588) protein_coding-promoter-TSS (FBgn0261588) -168 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5587 chr2R 15192616 15192691 + 48 NA promoter-TSS (FBgn0034432) protein_coding-promoter-TSS (FBgn0034432) -15 FBgn0034432 FBgn0034432 FBtr0300283 CG7461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13616 chrX 8700746 8700805 + 48 NA promoter-TSS (FBgn0026411) protein_coding-promoter-TSS (FBgn0026411) -21389 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11346 chr3R 18944099 18944174 + 48 NA promoter-TSS (FBgn0039056) protein_coding-promoter-TSS (FBgn0039056) 11 FBgn0039056 FBgn0039056 FBtr0084369 cenB1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1541 chr2L 11445728 11445915 + 48 NA promoter-TSS (FBgn0261648) protein_coding-promoter-TSS (FBgn0261648) -218 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6144 chr2R 19794816 19794891 + 48 NA promoter-TSS (FBgn0261794) protein_coding-promoter-TSS (FBgn0261794) -395 FBgn0015268 FBgn0015268 FBtr0305990 Nap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1787 chr2L 13322122 13322192 + 48 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) 8964 FBgn0264308 FBgn0264308 FBtr0331504 CG43778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13680 chrX 12658814 12658884 + 48 NA promoter-TSS (FBgn0030421) protein_coding-promoter-TSS (FBgn0030421) -1205 FBgn0030420 FBgn0030420 FBtr0073704 CG12717 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10993 chr3R 15703428 15703492 + 48 NA promoter-TSS (FBgn0038742) protein_coding-promoter-TSS (FBgn0038742) -10 FBgn0038742 FBgn0038742 FBtr0083817 Arc42 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12619 chr3R 26879619 26879708 + 48 NA promoter-TSS (FBgn0010808) protein_coding-promoter-TSS (FBgn0010808) -26 FBgn0010808 FBgn0010808 FBtr0085745 l(3)03670 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13607 chrX 8463139 8463302 + 48 NA exon (FBgn0030049, exon 6 of 6) protein_coding-exon (FBgn0030049, exon 6 of 6) 1761 FBgn0030050 FBgn0030050 FBtr0071232 CG12111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8299 chr3L 16779995 16780071 + 48 NA promoter-TSS (FBgn0025582) protein_coding-promoter-TSS (FBgn0025582) 8 FBgn0025582 FBgn0025582 FBtr0075345 Int6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7987 chr3L 13950716 13950792 + 48 NA intron (FBgn0052137, intron 2 of 6) protein_coding-intron (FBgn0052137, intron 2 of 6) 7048 FBgn0025874 FBgn0025874 FBtr0333030 Meics protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6930 chr3L 2466728 2466907 + 48 NA promoter-TSS (FBgn0035347) protein_coding-promoter-TSS (FBgn0035347) 8797 FBgn0035343 FBgn0035343 FBtr0072968 CG16762 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4994 chr2R 9716821 9716908 + 48 NA intron (FBgn0033872, intron 1 of 3) protein_coding-intron (FBgn0033872, intron 1 of 3) 2398 FBgn0033872 FBgn0033872 FBtr0087635 CG6329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4187 chr2R 3680718 3680784 + 48 NA promoter-TSS (FBgn0002891) protein_coding-promoter-TSS (FBgn0002891) -6 FBgn0002891 FBgn0002891 FBtr0088831 mus205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6253 chr2R 20744877 20744970 + 48 NA Intergenic Intergenic 8424 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9873 chr3R 7800626 7800710 + 48 NA promoter-TSS (FBgn0260744) protein_coding-promoter-TSS (FBgn0260744) -81 FBgn0260744 FBgn0260744 FBtr0082508 Tango9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6291 chr2RHet 12 248 + 48 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13038 chrM 11524 11581 + 48 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6840 chr3L 1488733 1489031 + 48 NA promoter-TSS (FBgn0086670) snoRNA-promoter-TSS (FBgn0086670) -24 FBgn0086670 FBgn0086670 FBtr0091635 snoRNA:Psi28S-2622 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_142 chr2L 1006606 1006690 + 48 NA Intergenic Intergenic 20242 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13256 chrU 5300564 5300618 + 48 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8556 chr3L 19262063 19262143 + 48 NA promoter-TSS (FBgn0036859) protein_coding-promoter-TSS (FBgn0036859) -90 FBgn0036857 FBgn0036857 FBtr0075017 CG9629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4344 chr2R 4781067 4781130 + 48 NA promoter-TSS (FBgn0033339) protein_coding-promoter-TSS (FBgn0033339) -31 FBgn0033339 FBgn0033339 FBtr0088643 sec31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8357 chr3L 17222796 17222869 + 48 NA intron (FBgn0260943, intron 2 of 14) protein_coding-intron (FBgn0260943, intron 2 of 14) 8480 FBgn0260943 FBgn0260943 FBtr0113427 Rbp6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2687 chr2L 17473209 17473276 + 48 NA promoter-TSS (FBgn0032640) protein_coding-promoter-TSS (FBgn0032640) -27 FBgn0000183 FBgn0000183 FBtr0305688 BicD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2322 chr2L 15643901 15644009 + 48 NA TTS (FBgn0028863) protein_coding-TTS (FBgn0028863) 13871 FBgn0028518 FBgn0028518 FBtr0080755 CG18480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8300 chr3L 16801426 16801503 + 48 NA promoter-TSS (FBgn0021768) protein_coding-promoter-TSS (FBgn0021768) 3370 FBgn0021768 FBgn0021768 FBtr0075328 nudC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13490 chrX 2482479 2482568 + 48 NA promoter-TSS (FBgn0001404) protein_coding-promoter-TSS (FBgn0001404) 2513 FBgn0040066 FBgn0040066 FBtr0070438 wds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2059 chr2L 14706414 14706499 + 47 NA Intergenic Intergenic -6209 FBgn0028855 FBgn0028855 FBtr0302946 CG15282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11847 chr3R 23251909 23251991 + 47 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 11254 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13772 chrX 16534877 16535002 + 47 NA promoter-TSS (FBgn0030766) protein_coding-promoter-TSS (FBgn0030766) 1 FBgn0030766 FBgn0030766 FBtr0074314 mthl1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5889 chr2R 17494595 17494662 + 47 NA promoter-TSS (FBgn0034638) protein_coding-promoter-TSS (FBgn0034638) -170 FBgn0034638 FBgn0034638 FBtr0071691 CG10433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12842 chr3RHet 730452 730507 + 47 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10059 chr3R 9207768 9207853 + 47 NA promoter-TSS (FBgn0038145) protein_coding-promoter-TSS (FBgn0038145) -30 FBgn0038145 FBgn0038145 FBtr0082754 Droj2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10649 chr3R 13445436 13445977 + 47 NA promoter-TSS (FBgn0011945) tRNA-promoter-TSS (FBgn0011945) 23 FBgn0011945 FBgn0011945 FBtr0083469 tRNA:P:90Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_13374 chrUextra 16632206 16632270 + 47 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6974 chr3L 3071812 3071930 + 47 NA promoter-TSS (FBgn0035397) protein_coding-promoter-TSS (FBgn0035397) -1032 FBgn0052486 FBgn0052486 FBtr0073004 CG32486 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4295 chr2R 4539235 4539347 + 47 NA intron (FBgn0003892, intron 1 of 5) protein_coding-intron (FBgn0003892, intron 1 of 5) 2151 FBgn0003892 FBgn0003892 FBtr0089427 ptc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10273 chr3R 11039362 11039444 + 47 NA promoter-TSS (FBgn0038302) protein_coding-promoter-TSS (FBgn0038302) -23 FBgn0038301 FBgn0038301 FBtr0083139 CG6654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9566 chr3R 5121116 5121403 + 47 NA exon (FBgn0037676, exon 4 of 4) protein_coding-exon (FBgn0037676, exon 4 of 4) -26233 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1834 chr2L 13743273 13743333 + 47 NA Intergenic Intergenic 4380 FBgn0262272 FBgn0262272 FBtr0304386 mir-1002 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7854 chr3L 13034803 13034889 + 47 NA promoter-TSS (FBgn0011284) protein_coding-promoter-TSS (FBgn0011284) -55 FBgn0011284 FBgn0011284 FBtr0075885 RpS4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3206 chr2L 20399278 20399547 + 47 NA promoter-TSS (FBgn0032857) protein_coding-promoter-TSS (FBgn0032857) -18 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11172 chr3R 16899014 16899142 + 47 NA promoter-TSS (FBgn0038851) protein_coding-promoter-TSS (FBgn0038851) -37 FBgn0003257 FBgn0003257 FBtr0084038 r-l protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8625 chr3L 21024867 21024953 + 47 NA promoter-TSS (FBgn0028402) protein_coding-promoter-TSS (FBgn0028402) -15 FBgn0028402 FBgn0028402 FBtr0304820 Sin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_327 chr2L 1644401 1644628 + 47 NA Intergenic Intergenic -6744 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1038 chr2L 8031003 8031076 + 47 NA promoter-TSS (FBgn0044323) protein_coding-promoter-TSS (FBgn0044323) 318 FBgn0044323 FBgn0044323 FBtr0079539 Cka protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9791 chr3R 7047171 7047231 + 47 NA promoter-TSS (FBgn0020910) protein_coding-promoter-TSS (FBgn0020910) 160 FBgn0037878 FBgn0037878 FBtr0082367 CG6693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10644 chr3R 13429453 13429619 + 47 NA Intergenic Intergenic -2288 FBgn0038524 FBgn0038524 FBtr0305308 sll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12764 chr3R 27551364 27551476 + 47 NA promoter-TSS (FBgn0003870) protein_coding-promoter-TSS (FBgn0003870) -704 FBgn0003870 FBgn0003870 FBtr0303228 ttk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9303 chr3R 3056717 3056774 + 47 NA intron (FBgn0037487, intron 2 of 5) protein_coding-intron (FBgn0037487, intron 2 of 5) 6609 FBgn0037487 FBgn0037487 FBtr0303219 CG14608 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8963 chr3R 485180 485299 + 47 NA promoter-TSS (FBgn0263346) protein_coding-promoter-TSS (FBgn0263346) -66 FBgn0263346 FBgn0263346 FBtr0308853 CG43427 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13578 chrX 6862753 6862840 + 47 NA promoter-TSS (FBgn0052732) protein_coding-promoter-TSS (FBgn0052732) -50 FBgn0052732 FBgn0052732 FBtr0071039 CG32732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2027 chr2L 14581034 14581140 + 47 NA Intergenic Intergenic 7147 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8203 chr3L 16019236 16019595 + 47 NA intron (FBgn0044028, intron 1 of 3) protein_coding-intron (FBgn0044028, intron 1 of 3) 2835 FBgn0044028 FBgn0044028 FBtr0075435 Notum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8053 chr3L 14451485 14451557 + 46 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) 47795 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7482 chr3L 9066147 9066233 + 46 NA promoter-TSS (FBgn0035960) protein_coding-promoter-TSS (FBgn0035960) -15 FBgn0035960 FBgn0035960 FBtr0076524 CG4942 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1606 chr2L 12097780 12097861 + 46 NA promoter-TSS (FBgn0032409) protein_coding-promoter-TSS (FBgn0032409) -23 FBgn0032409 FBgn0032409 FBtr0080330 Ced-12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1796 chr2L 13398937 13399006 + 46 NA promoter-TSS (FBgn0032521) protein_coding-promoter-TSS (FBgn0032521) -18 FBgn0032521 FBgn0032521 FBtr0080500 CG7110 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13571 chrX 6161226 6161307 + 46 NA promoter-TSS (FBgn0028982) protein_coding-promoter-TSS (FBgn0028982) -6 FBgn0040918 FBgn0040918 FBtr0070937 schlank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7917 chr3L 13443789 13443868 + 46 NA promoter-TSS (FBgn0036366) protein_coding-promoter-TSS (FBgn0036366) -42 FBgn0036368 FBgn0036368 FBtr0304792 CG10738 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_907 chr2L 6684339 6684397 + 46 NA promoter-TSS (FBgn0028703) protein_coding-promoter-TSS (FBgn0028703) -11 FBgn0028703 FBgn0028703 FBtr0333347 Nhe3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4041 chr2R 2058968 2059273 + 46 NA promoter-TSS (FBgn0050316) tRNA-promoter-TSS (FBgn0050316) -47 FBgn0011890 FBgn0011890 FBtr0086007 tRNA:K2:42Ad tRNA Nup98-S2-pascual-garcia2017_R1_peak_9617 chr3R 5635038 5635154 + 46 NA promoter-TSS (FBgn0037760) protein_coding-promoter-TSS (FBgn0037760) -11 FBgn0037760 FBgn0037760 FBtr0082155 FBX011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13396 chrUextra 24282186 24282389 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13595 chrX 7521168 7521336 + 46 NA intron (FBgn0004198, intron 1 of 6) protein_coding-intron (FBgn0004198, intron 1 of 6) 18071 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8076 chr3L 14667086 14667143 + 46 NA promoter-TSS (FBgn0011928) tRNA-promoter-TSS (FBgn0011928) -1 FBgn0011927 FBgn0011927 FBtr0075713 tRNA:M3:70Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_13336 chrUextra 3080852 3081172 + 46 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11775 chr3R 22977273 22977371 + 46 NA promoter-TSS (FBgn0029155) protein_coding-promoter-TSS (FBgn0029155) -41 FBgn0029155 FBgn0029155 FBtr0301707 Men-b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7855 chr3L 13037444 13037567 + 46 NA promoter-TSS (FBgn0036341) protein_coding-promoter-TSS (FBgn0036341) -233 FBgn0036341 FBgn0036341 FBtr0332076 Syx13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11653 chr3R 22361947 22362056 + 46 NA promoter-TSS (FBgn0263289) protein_coding-promoter-TSS (FBgn0263289) -71 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_96 chr2L 821354 821438 + 46 NA promoter-TSS (FBgn0031285) protein_coding-promoter-TSS (FBgn0031285) -26 FBgn0031285 FBgn0031285 FBtr0305507 CG3662 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5932 chr2R 18015005 18015068 + 46 NA promoter-TSS (FBgn0029147) protein_coding-promoter-TSS (FBgn0029147) -34 FBgn0034697 FBgn0034697 FBtr0071790 GM130 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7352 chr3L 7905003 7905099 + 46 NA promoter-TSS (FBgn0035824) protein_coding-promoter-TSS (FBgn0035824) -512 FBgn0035824 FBgn0035824 FBtr0076748 CG8281 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6147 chr2R 19852249 19852324 + 46 NA promoter-TSS (FBgn0020764) protein_coding-promoter-TSS (FBgn0020764) -4 FBgn0020764 FBgn0020764 FBtr0072151 Alas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11117 chr3R 16461087 16461183 + 46 NA promoter-TSS (FBgn0015279) protein_coding-promoter-TSS (FBgn0015279) -705 FBgn0015279 FBgn0015279 FBtr0083941 Pi3K92E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9821 chr3R 7257576 7257638 + 46 NA promoter-TSS (FBgn0037899) protein_coding-promoter-TSS (FBgn0037899) 147 FBgn0037900 FBgn0037900 FBtr0082390 CG5276 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11901 chr3R 23477569 23477654 + 46 NA promoter-TSS (FBgn0027494) protein_coding-promoter-TSS (FBgn0027494) -871 FBgn0027494 FBgn0027494 FBtr0085194 RpS10a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13484 chrX 1988179 1988259 + 46 NA promoter-TSS (FBgn0000382) protein_coding-promoter-TSS (FBgn0000382) -48 FBgn0000382 FBgn0000382 FBtr0070380 csw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11209 chr3R 17272166 17272401 + 45 NA promoter-TSS (FBgn0011278) protein_coding-promoter-TSS (FBgn0011278) -241 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13413 chrUextra 28342872 28342936 + 45 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9273 chr3R 2826389 2826870 + 45 NA Intergenic Intergenic -51428 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13488 chrX 2479955 2480013 + 45 NA promoter-TSS (FBgn0040066) protein_coding-promoter-TSS (FBgn0040066) -26 FBgn0040066 FBgn0040066 FBtr0070438 wds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8445 chr3L 17839554 17839687 + 45 NA promoter-TSS (FBgn0036762) protein_coding-promoter-TSS (FBgn0036762) -19 FBgn0036761 FBgn0036761 FBtr0075160 MED19 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_448 chr2L 2856054 2856111 + 45 NA promoter-TSS (FBgn0015521) protein_coding-promoter-TSS (FBgn0015521) 12 FBgn0015521 FBgn0015521 FBtr0273293 RpS21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8285 chr3L 16704740 16704865 + 45 NA promoter-TSS (FBgn0063485) protein_coding-promoter-TSS (FBgn0063485) -25 FBgn0063485 FBgn0063485 FBtr0306152 Lasp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_512 chr2L 3534027 3534561 + 45 NA Intergenic Intergenic 3505 FBgn0031550 FBgn0031550 FBtr0077529 Che-13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7791 chr3L 12523238 12523305 + 45 NA promoter-TSS (FBgn0036298) protein_coding-promoter-TSS (FBgn0036298) 0 FBgn0036298 FBgn0036298 FBtr0075967 nst protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3600 chr2L 22072147 22072206 + 45 NA exon (FBgn0051702, exon 1 of 2) protein_coding-exon (FBgn0051702, exon 1 of 2) 1023 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3915 chr2R 363824 363892 + 45 NA Intergenic Intergenic -5300 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3292 chr2L 20770111 20770173 + 45 NA promoter-TSS (FBgn0000251) protein_coding-promoter-TSS (FBgn0000251) -752 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9450 chr3R 4159514 4159799 + 45 NA promoter-TSS (FBgn0003129) protein_coding-promoter-TSS (FBgn0003129) -142 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13409 chrUextra 28031570 28031627 + 45 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8526 chr3L 18752114 18752273 + 45 NA intron (FBgn0001078, intron 1 of 7) protein_coding-intron (FBgn0001078, intron 3 of 9) 6651 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4439 chr2R 5429361 5429456 + 45 NA TTS (FBgn0259246) protein_coding-TTS (FBgn0259246) 6232 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10184 chr3R 10199461 10199539 + 45 NA promoter-TSS (FBgn0024321) protein_coding-promoter-TSS (FBgn0024321) -2032 FBgn0086058 FBgn0086058 FBtr0114334 snoRNA:Me18S-G1189 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3928 chr2R 575431 575487 + 45 NA Intergenic Intergenic 16097 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3356 chr2L 21221215 21221327 + 45 NA promoter-TSS (FBgn0032935) protein_coding-promoter-TSS (FBgn0032935) -41 FBgn0026577 FBgn0026577 FBtr0331677 CG8677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13251 chrU 4475214 4475278 + 45 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1089 chr2L 8543245 8543335 + 45 NA promoter-TSS (FBgn0011259) protein_coding-promoter-TSS (FBgn0011259) -40 FBgn0011259 FBgn0011259 FBtr0329930 Sema-1a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13799 chrX 18137851 18138173 + 45 NA promoter-TSS (FBgn0030904) protein_coding-promoter-TSS (FBgn0030904) -695 FBgn0030904 FBgn0030904 FBtr0300182 upd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9591 chr3R 5154690 5154760 + 45 NA promoter-TSS (FBgn0037676) protein_coding-promoter-TSS (FBgn0037676) -498 FBgn0037676 FBgn0037676 FBtr0301210 CG8861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3329 chr2L 21051953 21052236 + 45 NA promoter-TSS (FBgn0010395) protein_coding-promoter-TSS (FBgn0010395) -939 FBgn0010395 FBgn0010395 FBtr0081461 betaInt-nu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10849 chr3R 14754368 14754446 + 45 NA promoter-TSS (FBgn0038662) protein_coding-promoter-TSS (FBgn0038662) -11 FBgn0038662 FBgn0038662 FBtr0083723 CG14290 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6823 chr3L 1366924 1366998 + 45 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -3667 FBgn0003295 FBgn0003295 FBtr0072681 ru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10872 chr3R 14920668 14920743 + 45 NA promoter-TSS (FBgn0004876) protein_coding-promoter-TSS (FBgn0004876) -9 FBgn0016120 FBgn0016120 FBtr0083728 ATPsyn-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13814 chrX 18544465 18544523 + 45 NA promoter-TSS (FBgn0030944) protein_coding-promoter-TSS (FBgn0030944) -15 FBgn0030944 FBgn0030944 FBtr0074615 CG6617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4479 chr2R 5707745 5707823 + 45 NA promoter-TSS (FBgn0033446) protein_coding-promoter-TSS (FBgn0033446) -284 FBgn0054033 FBgn0054033 FBtr0100088 CG34033 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11441 chr3R 20702324 20702407 + 45 NA promoter-TSS (FBgn0039241) protein_coding-promoter-TSS (FBgn0039241) 1 FBgn0039240 FBgn0039240 FBtr0084726 CG3744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1678 chr2L 12655838 12656050 + 45 NA Intergenic Intergenic -9588 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8641 chr3L 21336796 21336879 + 45 NA promoter-TSS (FBgn0052436) protein_coding-promoter-TSS (FBgn0052436) -21 FBgn0037074 FBgn0037074 FBtr0078404 CG7324 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8395 chr3L 17523153 17523229 + 45 NA promoter-TSS (FBgn0036735) protein_coding-promoter-TSS (FBgn0036735) 10 FBgn0259174 FBgn0259174 FBtr0299642 Nedd4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8618 chr3L 20802334 20802406 + 44 NA promoter-TSS (FBgn0037027) protein_coding-promoter-TSS (FBgn0037027) -23 FBgn0037026 FBgn0037026 FBtr0331529 CG3634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1821 chr2L 13642012 13642097 + 44 NA exon (FBgn0028546, exon 2 of 5) protein_coding-exon (FBgn0028546, exon 2 of 5) 306 FBgn0028546 FBgn0028546 FBtr0080511 ics protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8252 chr3L 16345040 16345119 + 44 NA promoter-TSS (FBgn0036615) protein_coding-promoter-TSS (FBgn0036615) -12 FBgn0036615 FBgn0036615 FBtr0075381 CG4933 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5383 chr2R 13279263 13279374 + 44 NA promoter-TSS (FBgn0011879) tRNA-promoter-TSS (FBgn0011879) 32 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2288 chr2L 15546841 15547049 + 44 NA promoter-TSS (FBgn0259922) protein_coding-promoter-TSS (FBgn0259922) -574 FBgn0259922 FBgn0259922 FBtr0300217 CG42448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13539 chrX 5216755 5216842 + 44 NA promoter-TSS (FBgn0014024) protein_coding-promoter-TSS (FBgn0014024) -55 FBgn0014024 FBgn0014024 FBtr0301880 Rnp4F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3351 chr2L 21199629 21199700 + 44 NA promoter-TSS (FBgn0011829) protein_coding-promoter-TSS (FBgn0011829) 599 FBgn0051624 FBgn0051624 FBtr0301928 CG31624 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6511 chr2RHet 1859508 1859576 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4008 chr2R 1614367 1614755 + 44 NA promoter-TSS (FBgn0000099) protein_coding-promoter-TSS (FBgn0000099) -10007 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8024 chr3L 14183837 14184024 + 44 NA promoter-TSS (FBgn0013718) protein_coding-promoter-TSS (FBgn0013718) -1182 FBgn0036414 FBgn0036414 FBtr0321258 nan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13361 chrUextra 12442402 12442580 + 44 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_691 chr2L 4770005 4770069 + 44 NA intron (FBgn0031627, intron 1 of 6) protein_coding-intron (FBgn0031627, intron 1 of 6) 7100 FBgn0260428 FBgn0260428 FBtr0300851 CG42523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13825 chrX 19460098 19460227 + 44 NA promoter-TSS (FBgn0000257) protein_coding-promoter-TSS (FBgn0000257) 110 FBgn0000257 FBgn0000257 FBtr0074728 car protein_coding Nup98-S2-pascual-garcia2017_R1_peak_329 chr2L 1710428 1710506 + 44 NA promoter-TSS (FBgn0031357) protein_coding-promoter-TSS (FBgn0031357) 5 FBgn0031357 FBgn0031357 FBtr0333542 mRpL48 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9497 chr3R 4493896 4493965 + 44 NA promoter-TSS (FBgn0012026) tRNA-promoter-TSS (FBgn0012026) 0 FBgn0012026 FBgn0012026 FBtr0081886 tRNA:Y1:85Ac tRNA Nup98-S2-pascual-garcia2017_R1_peak_7738 chr3L 12161316 12161379 + 44 NA exon (FBgn0036260, exon 2 of 4) protein_coding-exon (FBgn0036260, exon 2 of 4) -4512 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_474 chr2L 3169558 3169669 + 44 NA promoter-TSS (FBgn0011985) tRNA-promoter-TSS (FBgn0011985) 31 FBgn0011985 FBgn0011985 FBtr0077577 tRNA:S7:23Eb tRNA Nup98-S2-pascual-garcia2017_R1_peak_9932 chr3R 8257007 8257080 + 44 NA promoter-TSS (FBgn0086134) protein_coding-promoter-TSS (FBgn0086134) -4 FBgn0086134 FBgn0086134 FBtr0082590 Pros25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10543 chr3R 12672847 12673177 + 44 NA intron (FBgn0263610, intron 5 of 7) ncRNA-intron (FBgn0263610, intron 4 of 6) -2714 FBgn0020546 FBgn0020546 FBtr0083363 iab-4 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7240 chr3L 6897201 6897460 + 44 NA Intergenic Intergenic 9734 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11396 chr3R 19747815 19747896 + 43 NA intron (FBgn0016754, intron 1 of 8) protein_coding-intron (FBgn0016754, intron 1 of 8) 840 FBgn0016754 FBgn0016754 FBtr0330380 sba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13811 chrX 18409368 18409450 + 43 NA promoter-TSS (FBgn0027087) protein_coding-promoter-TSS (FBgn0027087) -52 FBgn0030935 FBgn0030935 FBtr0333807 CG15048 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8320 chr3L 16948442 16948499 + 43 NA promoter-TSS (FBgn0010352) protein_coding-promoter-TSS (FBgn0010352) 435 FBgn0010352 FBgn0010352 FBtr0075269 Nc73EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8154 chr3L 15581283 15581391 + 43 NA promoter-TSS (FBgn0036518) protein_coding-promoter-TSS (FBgn0036518) -370 FBgn0036516 FBgn0036516 FBtr0301186 CG7656 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5305 chr2R 12471529 12471676 + 43 NA intron (FBgn0016131, intron 3 of 6) protein_coding-intron (FBgn0016131, intron 3 of 6) -1997 FBgn0003274 FBgn0003274 FBtr0087105 RpLP2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4201 chr2R 3804415 3804482 + 43 NA promoter-TSS (FBgn0015509) protein_coding-promoter-TSS (FBgn0015509) -235 FBgn0015509 FBgn0015509 FBtr0088847 lin19 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10223 chr3R 10563734 10563840 + 43 NA intron (FBgn0011217, intron 1 of 4) protein_coding-intron (FBgn0011217, intron 2 of 5) 2699 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6977 chr3L 3095719 3095832 + 43 NA promoter-TSS (FBgn0052288) tRNA-promoter-TSS (FBgn0052288) 38 FBgn0052288 FBgn0052288 FBtr0073018 tRNA:CR32288 tRNA Nup98-S2-pascual-garcia2017_R1_peak_733 chr2L 5241419 5241487 + 43 NA promoter-TSS (FBgn0051914) tRNA-promoter-TSS (FBgn0051914) -276 FBgn0051914 FBgn0051914 FBtr0079090 tRNA:CR31914 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11411 chr3R 20078373 20078460 + 43 NA promoter-TSS (FBgn0039175) protein_coding-promoter-TSS (FBgn0039175) -15 FBgn0039175 FBgn0039175 FBtr0084637 CG5706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2851 chr2L 18152393 18152640 + 43 NA promoter-TSS (FBgn0032668) protein_coding-promoter-TSS (FBgn0032668) -106 FBgn0041184 FBgn0041184 FBtr0329929 Socs36E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7260 chr3L 6981871 6982258 + 43 NA Intergenic Intergenic -1658 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11062 chr3R 16135115 16135194 + 43 NA promoter-TSS (FBgn0261550) protein_coding-promoter-TSS (FBgn0261550) -1896 FBgn0038784 FBgn0038784 FBtr0083900 CG4362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7995 chr3L 13995178 13995260 + 43 NA promoter-TSS (FBgn0036398) protein_coding-promoter-TSS (FBgn0036398) -8 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7694 chr3L 11826664 11826756 + 43 NA promoter-TSS (FBgn0000404) protein_coding-promoter-TSS (FBgn0000404) -32 FBgn0000404 FBgn0000404 FBtr0076076 CycA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10637 chr3R 13361316 13361392 + 43 NA promoter-TSS (FBgn0038516) protein_coding-promoter-TSS (FBgn0038516) 699 FBgn0038516 FBgn0038516 FBtr0083454 CG5840 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7643 chr3L 11278784 11278862 + 43 NA Intergenic Intergenic 10196 FBgn0036152 FBgn0036152 FBtr0076183 CG6175 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4296 chr2R 4570690 4570749 + 43 NA promoter-TSS (FBgn0011906) tRNA-promoter-TSS (FBgn0011906) -1 FBgn0011906 FBgn0011906 FBtr0088703 tRNA:L2:44EF tRNA Nup98-S2-pascual-garcia2017_R1_peak_4660 chr2R 7292147 7292229 + 43 NA Intergenic Intergenic -1028 FBgn0033633 FBgn0033633 FBtr0088134 CG7759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6217 chr2R 20427011 20427089 + 43 NA promoter-TSS (FBgn0035023) protein_coding-promoter-TSS (FBgn0035023) 3337 FBgn0035022 FBgn0035022 FBtr0072305 CG11413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13838 chrX 20936341 20936416 + 43 NA promoter-TSS (FBgn0052512) protein_coding-promoter-TSS (FBgn0052512) -763 FBgn0052512 FBgn0052512 FBtr0332847 CG32512 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13686 chrX 12791360 12791473 + 43 NA promoter-TSS (FBgn0259171) protein_coding-promoter-TSS (FBgn0259171) -552 FBgn0259171 FBgn0259171 FBtr0333524 Pde9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_942 chr2L 6914100 6914292 + 43 NA promoter-TSS (FBgn0011737) protein_coding-promoter-TSS (FBgn0011737) -58 FBgn0011737 FBgn0011737 FBtr0079371 wee protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1048 chr2L 8071618 8071674 + 43 NA promoter-TSS (FBgn0011230) protein_coding-promoter-TSS (FBgn0011230) -22 FBgn0011230 FBgn0011230 FBtr0333088 poe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2407 chr2L 16075104 16075175 + 43 NA exon (FBgn0013433, exon 3 of 8) protein_coding-exon (FBgn0013433, exon 3 of 8) -19870 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1946 chr2L 14355368 14355432 + 43 NA promoter-TSS (FBgn0261535) protein_coding-promoter-TSS (FBgn0261535) -320 FBgn0261535 FBgn0261535 FBtr0080639 l(2)34Fd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1092 chr2L 8553780 8553859 + 43 NA intron (FBgn0011259, intron 2 of 20) protein_coding-intron (FBgn0011259, intron 2 of 21) 10489 FBgn0011259 FBgn0011259 FBtr0329930 Sema-1a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1037 chr2L 7998786 7998843 + 42 NA promoter-TSS (FBgn0031971) protein_coding-promoter-TSS (FBgn0031971) -120 FBgn0031971 FBgn0031971 FBtr0079532 CG7224 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1658 chr2L 12586901 12587201 + 42 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -31297 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8449 chr3L 17906417 17906486 + 42 NA promoter-TSS (FBgn0036772) protein_coding-promoter-TSS (FBgn0036772) -786 FBgn0036772 FBgn0036772 FBtr0075152 CG5290 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9871 chr3R 7774802 7774977 + 42 NA promoter-TSS (FBgn0051211) protein_coding-promoter-TSS (FBgn0051211) -38 FBgn0037963 FBgn0037963 FBtr0082513 Cad87A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_624 chr2L 4345836 4345904 + 42 NA TTS (FBgn0020762) protein_coding-TTS (FBgn0020762) 2134 FBgn0262375 FBgn0262375 FBtr0304206 mir-1005 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12373 chr3R 25444682 25444762 + 42 NA promoter-TSS (FBgn0039674) protein_coding-promoter-TSS (FBgn0039674) -34 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5533 chr2R 14690894 14691054 + 42 NA intron (FBgn0010651, intron 1 of 4) protein_coding-intron (FBgn0010651, intron 1 of 4) -1070 FBgn0010651 FBgn0010651 FBtr0086635 l(2)08717 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7121 chr3L 5915332 5915468 + 42 NA promoter-TSS (FBgn0035649) protein_coding-promoter-TSS (FBgn0035649) -176 FBgn0052407 FBgn0052407 FBtr0330118 CG32407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13706 chrX 13208951 13209028 + 42 NA Intergenic Intergenic -6351 FBgn0085388 FBgn0085388 FBtr0112575 IP3K2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5186 chr2R 11419753 11419916 + 42 NA promoter-TSS (FBgn0019968) protein_coding-promoter-TSS (FBgn0019968) -75 FBgn0019968 FBgn0019968 FBtr0329957 Khc-73 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4169 chr2R 3383756 3383842 + 42 NA promoter-TSS (FBgn0033183) protein_coding-promoter-TSS (FBgn0033183) 13 FBgn0033183 FBgn0033183 FBtr0300830 CG1620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1580 chr2L 11808054 11808203 + 42 NA exon (FBgn0020309, exon 1 of 8) protein_coding-exon (FBgn0020309, exon 1 of 8) 844 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9570 chr3R 5124955 5125029 + 42 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -22500 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4234 chr2R 4061501 4061601 + 42 NA promoter-TSS (FBgn0033274) protein_coding-promoter-TSS (FBgn0033274) -119 FBgn0053087 FBgn0053087 FBtr0331381 LRP1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3754 chr2L 22581697 22581788 + 42 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 62785 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13826 chrX 19532405 19532514 + 42 NA promoter-TSS (FBgn0031047) protein_coding-promoter-TSS (FBgn0031047) -74 FBgn0087008 FBgn0087008 FBtr0074762 e(y)3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13771 chrX 16504636 16504731 + 42 NA promoter-TSS (FBgn0025743) protein_coding-promoter-TSS (FBgn0025743) -54 FBgn0025743 FBgn0025743 FBtr0074285 mbt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10776 chr3R 14273870 14273959 + 42 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) -36561 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13558 chrX 5793307 5793825 + 42 NA Intergenic Intergenic -1328 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6785 chr3L 1098604 1098748 + 42 NA intron (FBgn0004870, intron 1 of 1) protein_coding-intron (FBgn0004870, intron 1 of 3) 2413 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10277 chr3R 11153966 11154068 + 42 NA promoter-TSS (FBgn0000533) protein_coding-promoter-TSS (FBgn0000533) -17 FBgn0038318 FBgn0038318 FBtr0083122 CG6236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12442 chr3R 25597564 25597648 + 42 NA intron (FBgn0001297, intron 1 of 2) protein_coding-intron (FBgn0001297, intron 1 of 2) 8847 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4388 chr2R 4982671 4982761 + 42 NA promoter-TSS (FBgn0033374) protein_coding-promoter-TSS (FBgn0033374) -87 FBgn0083124 FBgn0083124 FBtr0300230 Uhg4 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10219 chr3R 10485103 10485163 + 42 NA promoter-TSS (FBgn0038251) protein_coding-promoter-TSS (FBgn0038251) -30 FBgn0038251 FBgn0038251 FBtr0082968 CG3508 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7021 chr3L 4003408 4003502 + 42 NA promoter-TSS (FBgn0035482) protein_coding-promoter-TSS (FBgn0035482) -25 FBgn0035482 FBgn0035482 FBtr0307170 CG14985 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_513 chr2L 3539501 3539628 + 42 NA promoter-TSS (FBgn0024244) protein_coding-promoter-TSS (FBgn0024244) -171 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7353 chr3L 7908190 7908286 + 42 NA promoter-TSS (FBgn0052368) protein_coding-promoter-TSS (FBgn0052368) -20 FBgn0035825 FBgn0035825 FBtr0076770 CG8111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10867 chr3R 14839910 14840006 + 42 NA intron (FBgn0026239, intron 4 of 4) protein_coding-intron (FBgn0026239, intron 4 of 4) 9786 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9837 chr3R 7476400 7476476 + 42 NA promoter-TSS (FBgn0037926) protein_coding-promoter-TSS (FBgn0037926) -272 FBgn0037926 FBgn0037926 FBtr0082420 Elp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_886 chr2L 6473906 6473989 + 42 NA promoter-TSS (FBgn0259749) protein_coding-promoter-TSS (FBgn0259749) -1877 FBgn0259749 FBgn0259749 FBtr0079269 mmy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6151 chr2R 19925415 19925495 + 41 NA promoter-TSS (FBgn0034964) protein_coding-promoter-TSS (FBgn0034964) -52 FBgn0034964 FBgn0034964 FBtr0072168 IntS1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5422 chr2R 13709782 13710203 + 41 NA intron (FBgn0259211, intron 3 of 13) protein_coding-intron (FBgn0259211, intron 3 of 12) -1078 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13810 chrX 18399496 18399578 + 41 NA promoter-TSS (FBgn0010194) protein_coding-promoter-TSS (FBgn0010194) -101 FBgn0010194 FBgn0010194 FBtr0074623 Wnt5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9717 chr3R 6478084 6478142 + 41 NA Intergenic Intergenic -4055 FBgn0085333 FBgn0085333 FBtr0112500 CG34304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11351 chr3R 19052303 19052741 + 41 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) -4839 FBgn0262975 FBgn0262975 FBtr0308227 cnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10043 chr3R 9097706 9097780 + 41 NA promoter-TSS (FBgn0038129) protein_coding-promoter-TSS (FBgn0038129) 5 FBgn0038129 FBgn0038129 FBtr0082778 CG8449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1158 chr2L 8734505 8734579 + 41 NA exon (FBgn0003209, exon 2 of 10) protein_coding-exon (FBgn0003209, exon 2 of 10) 6118 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_718 chr2L 5070927 5070992 + 41 NA promoter-TSS (FBgn0261608) protein_coding-promoter-TSS (FBgn0261608) 2 FBgn0261608 FBgn0261608 FBtr0079017 RpL37A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7155 chr3L 6117929 6118083 + 41 NA TTS (FBgn0005658) protein_coding-TTS (FBgn0005658) 3901 FBgn0002440 FBgn0002440 FBtr0077062 l(3)mbn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9610 chr3R 5551295 5551390 + 41 NA promoter-TSS (FBgn0002431) protein_coding-promoter-TSS (FBgn0002431) -9 FBgn0002431 FBgn0002431 FBtr0082090 hyd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6984 chr3L 3239572 3239684 + 41 NA promoter-TSS (FBgn0035425) protein_coding-promoter-TSS (FBgn0035425) -306 FBgn0035425 FBgn0035425 FBtr0073093 CG17746 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6788 chr3L 1102351 1102881 + 41 NA Intergenic Intergenic -1527 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11044 chr3R 15970672 15970769 + 41 NA Intergenic Intergenic -5077 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2146 chr2L 15005674 15005743 + 41 NA promoter-TSS (FBgn0040228) protein_coding-promoter-TSS (FBgn0040228) -25 FBgn0040228 FBgn0040228 FBtr0080693 dyn-p25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1884 chr2L 14105308 14105366 + 41 NA exon (FBgn0028904, exon 2 of 3) protein_coding-exon (FBgn0028904, exon 2 of 3) 854 FBgn0028904 FBgn0028904 FBtr0080596 CG16879 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7996 chr3L 13997275 13997352 + 41 NA intron (FBgn0036398, intron 2 of 7) protein_coding-intron (FBgn0036398, intron 2 of 7) 2086 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4442 chr2R 5466941 5467020 + 41 NA promoter-TSS (FBgn0033426) protein_coding-promoter-TSS (FBgn0033426) 25 FBgn0033426 FBgn0033426 FBtr0088523 CG1814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13277 chrU 7544814 7544880 + 41 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3267 chr2L 20656152 20656213 + 41 NA promoter-TSS (FBgn0032873) protein_coding-promoter-TSS (FBgn0032873) -6 FBgn0261787 FBgn0261787 FBtr0081403 bru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3728 chr2L 22483324 22483386 + 41 NA Intergenic Intergenic 10873 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4166 chr2R 3334940 3335020 + 41 NA promoter-TSS (FBgn0033174) protein_coding-promoter-TSS (FBgn0033174) -4 FBgn0033174 FBgn0033174 FBtr0088974 CG11125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12532 chr3R 26358098 26358244 + 41 NA promoter-TSS (FBgn0082582) protein_coding-promoter-TSS (FBgn0082582) -5410 FBgn0027654 FBgn0027654 FBtr0085683 jdp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13418 chrUextra 28583670 28583724 + 41 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4697 chr2R 7491117 7491179 + 41 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 1293 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8599 chr3L 20303069 20303141 + 41 NA promoter-TSS (FBgn0003124) protein_coding-promoter-TSS (FBgn0003124) -42 FBgn0003124 FBgn0003124 FBtr0100318 polo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13617 chrX 8701007 8701100 + 41 NA Intergenic Intergenic -21667 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2850 chr2L 18138031 18138102 + 41 NA TTS (FBgn0041184) protein_coding-TTS (FBgn0041184) 144 FBgn0001301 FBgn0001301 FBtr0081043 kel protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7649 chr3L 11358578 11358879 + 41 NA promoter-TSS (FBgn0036155) protein_coding-promoter-TSS (FBgn0036155) -743 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6992 chr3L 3325927 3325997 + 41 NA promoter-TSS (FBgn0035438) protein_coding-promoter-TSS (FBgn0035438) -16 FBgn0035437 FBgn0035437 FBtr0073084 CG11526 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2918 chr2L 18708570 18708627 + 41 NA promoter-TSS (FBgn0032705) protein_coding-promoter-TSS (FBgn0032705) 90 FBgn0025608 FBgn0025608 FBtr0081126 Faf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4874 chr2R 8846564 8846674 + 41 NA Intergenic Intergenic 5558 FBgn0033787 FBgn0033787 FBtr0087792 CG13321 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2496 chr2L 16588015 16588123 + 41 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -17876 FBgn0051815 FBgn0051815 FBtr0080870 CG31815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4093 chr2R 2810755 2810821 + 41 NA promoter-TSS (FBgn0033117) protein_coding-promoter-TSS (FBgn0033117) -163 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11522 chr3R 21800441 21800510 + 40 NA intron (FBgn0259146, intron 1 of 2) protein_coding-intron (FBgn0259146, intron 1 of 2) 2181 FBgn0259146 FBgn0259146 FBtr0299575 CG42261 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6898 chr3L 2151944 2152000 + 40 NA promoter-TSS (FBgn0052311) protein_coding-promoter-TSS (FBgn0052311) -272 FBgn0052311 FBgn0052311 FBtr0332119 zormin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6239 chr2R 20631210 20631340 + 40 NA promoter-TSS (FBgn0050421) protein_coding-promoter-TSS (FBgn0050421) -60 FBgn0050421 FBgn0050421 FBtr0072369 CG30421 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9917 chr3R 8106608 8106923 + 40 NA promoter-TSS (FBgn0003651) protein_coding-promoter-TSS (FBgn0003651) -109 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_534 chr2L 3662194 3662616 + 40 NA promoter-TSS (FBgn0085369) protein_coding-promoter-TSS (FBgn0085369) -340 FBgn0085369 FBgn0085369 FBtr0302391 CG34340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10650 chr3R 13450268 13450338 + 40 NA promoter-TSS (FBgn0038530) protein_coding-promoter-TSS (FBgn0038530) 57 FBgn0011993 FBgn0011993 FBtr0083497 tRNA:T:90Ca tRNA Nup98-S2-pascual-garcia2017_R1_peak_8630 chr3L 21097884 21097962 + 40 NA intron (FBgn0020294, intron 1 of 7) protein_coding-intron (FBgn0020294, intron 1 of 7) -4723 FBgn0020294 FBgn0020294 FBtr0333449 ko protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13365 chrUextra 13674480 13674544 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9514 chr3R 4640151 4640211 + 40 NA promoter-TSS (FBgn0037635) protein_coding-promoter-TSS (FBgn0037635) -4648 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9712 chr3R 6442438 6442791 + 40 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -11222 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1050 chr2L 8104146 8104233 + 40 NA intron (FBgn0261822, intron 4 of 9) protein_coding-intron (FBgn0261822, intron 2 of 6) 15885 FBgn0261822 FBgn0261822 FBtr0079573 Bsg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13419 chrUextra 28604136 28604297 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4739 chr2R 7720380 7720444 + 40 NA intron (FBgn0033654, intron 2 of 3) protein_coding-intron (FBgn0033654, intron 2 of 3) 6623 FBgn0033654 FBgn0033654 FBtr0088064 Sobp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10577 chr3R 12846819 12846923 + 40 NA promoter-TSS (FBgn0038467) protein_coding-promoter-TSS (FBgn0038467) -61 FBgn0038467 FBgn0038467 FBtr0083373 CG3590 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10523 chr3R 12574439 12574498 + 40 NA intron (FBgn0020556, intron 1 of 2) ncRNA-intron (FBgn0020556, intron 2 of 2) -2360 FBgn0020556 FBgn0020556 FBtr0083344 bxd ncRNA Nup98-S2-pascual-garcia2017_R1_peak_818 chr2L 5810479 5810550 + 40 NA Intergenic Intergenic -1060 FBgn0262999 FBgn0262999 FBtr0306842 CG43307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13747 chrX 14841502 14841638 + 40 NA intron (FBgn0027601, intron 3 of 6) protein_coding-intron (FBgn0027601, intron 1 of 4) 4257 FBgn0027601 FBgn0027601 FBtr0073972 pdgy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6837 chr3L 1463615 1463688 + 40 NA promoter-TSS (FBgn0004635) protein_coding-promoter-TSS (FBgn0004635) -160 FBgn0004635 FBgn0004635 FBtr0072694 rho protein_coding Nup98-S2-pascual-garcia2017_R1_peak_672 chr2L 4629587 4629660 + 40 NA Intergenic Intergenic -11673 FBgn0083938 FBgn0083938 FBtr0110769 BG642163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10939 chr3R 15424785 15424868 + 40 NA promoter-TSS (FBgn0038714) protein_coding-promoter-TSS (FBgn0038714) -155 FBgn0038714 FBgn0038714 FBtr0083811 Cpr92A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1868 chr2L 14022455 14022585 + 40 NA Intergenic Intergenic -2312 FBgn0001967 FBgn0001967 FBtr0290243 nimC3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13035 chrM 3494 3707 + 40 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5840 chr2R 17384955 17385017 + 40 NA promoter-TSS (FBgn0010470) protein_coding-promoter-TSS (FBgn0010470) -273 FBgn0010470 FBgn0010470 FBtr0306013 Fkbp13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5832 chr2R 17271829 17271905 + 40 NA promoter-TSS (FBgn0034626) protein_coding-promoter-TSS (FBgn0034626) -21 FBgn0034626 FBgn0034626 FBtr0071609 CG10795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4451 chr2R 5580808 5580880 + 39 NA promoter-TSS (FBgn0023143) protein_coding-promoter-TSS (FBgn0023143) -11 FBgn0023143 FBgn0023143 FBtr0310357 Uba1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_170 chr2L 1128465 1128543 + 39 NA promoter-TSS (FBgn0031304) protein_coding-promoter-TSS (FBgn0031304) -812 FBgn0031304 FBgn0031304 FBtr0077956 CG4552 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11364 chr3R 19140188 19140244 + 39 NA promoter-TSS (FBgn0003118) protein_coding-promoter-TSS (FBgn0003118) -24305 FBgn0039071 FBgn0039071 FBtr0084382 CG4434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10994 chr3R 15715722 15715831 + 39 NA promoter-TSS (FBgn0038744) protein_coding-promoter-TSS (FBgn0038744) -794 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10556 chr3R 12746273 12746337 + 39 NA intron (FBgn0263610, intron 1 of 7) ncRNA-intron (FBgn0263610, intron 1 of 7) 2650 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11313 chr3R 18223225 18223387 + 39 NA promoter-TSS (FBgn0051166) tRNA-promoter-TSS (FBgn0051166) 12 FBgn0051166 FBgn0051166 FBtr0084223 tRNA:CR31166 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1153 chr2L 8662451 8662556 + 39 NA exon (FBgn0011259, exon 18 of 22) protein_coding-exon (FBgn0011259, exon 18 of 22) -10649 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6802 chr3L 1178174 1178539 + 39 NA Intergenic Intergenic -1080 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2537 chr2L 16873730 16873835 + 39 NA intron (FBgn0051781, intron 1 of 1) ncRNA-intron (FBgn0051781, intron 1 of 1) 4295 FBgn0051781 FBgn0051781 FBtr0308928 CR31781 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_793 chr2L 5635262 5635330 + 39 NA intron (FBgn0051646, intron 8 of 12) protein_coding-intron (FBgn0051646, intron 8 of 12) -5704 FBgn0262256 FBgn0262256 FBtr0304352 mir-959 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_459 chr2L 3046561 3046901 + 39 NA promoter-TSS (FBgn0263847) ncRNA-promoter-TSS (FBgn0263847) -15 FBgn0263847 FBgn0263847 FBtr0321322 CR43708 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13491 chrX 2518798 2518876 + 39 NA promoter-TSS (FBgn0040333) protein_coding-promoter-TSS (FBgn0040333) 0 FBgn0261922 FBgn0261922 FBtr0307158 PI4KIIIalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5582 chr2R 15141471 15141876 + 39 NA promoter-TSS (FBgn0053453) protein_coding-promoter-TSS (FBgn0053453) -983 FBgn0053453 FBgn0053453 FBtr0086564 CG33453 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5906 chr2R 17771619 17771712 + 39 NA intron (FBgn0085397, intron 1 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 848 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2685 chr2L 17429903 17430039 + 39 NA intron (FBgn0011274, intron 1 of 7) protein_coding-intron (FBgn0011274, intron 1 of 7) 3190 FBgn0011274 FBgn0011274 FBtr0301577 Dif protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10547 chr3R 12701604 12701658 + 39 NA intron (FBgn0263610, intron 3 of 7) ncRNA-intron (FBgn0263610, intron 2 of 6) -16501 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2939 chr2L 18859289 18859362 + 39 NA promoter-TSS (FBgn0032720) protein_coding-promoter-TSS (FBgn0032720) -79 FBgn0032720 FBgn0032720 FBtr0089318 mRpL13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7118 chr3L 5887485 5887552 + 39 NA Intergenic Intergenic 3017 FBgn0035644 FBgn0035644 FBtr0077081 Pole2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7916 chr3L 13435636 13435723 + 39 NA promoter-TSS (FBgn0036365) protein_coding-promoter-TSS (FBgn0036365) -15 FBgn0036365 FBgn0036365 FBtr0075852 CG10732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9406 chr3R 3790610 3790682 + 39 NA intron (FBgn0000504, intron 1 of 4) protein_coding-intron (FBgn0000504, intron 1 of 4) 2484 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11063 chr3R 16153676 16153786 + 39 NA promoter-TSS (FBgn0038788) protein_coding-promoter-TSS (FBgn0038788) -27 FBgn0038787 FBgn0038787 FBtr0113252 CG4360 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13332 chrUextra 1918065 1918119 + 39 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8417 chr3L 17607200 17607387 + 39 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 5132 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10146 chr3R 9784458 9784512 + 39 NA promoter-TSS (FBgn0016672) protein_coding-promoter-TSS (FBgn0016672) 12 FBgn0016672 FBgn0016672 FBtr0082865 Ipp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4292 chr2R 4520077 4520291 + 39 NA promoter-TSS (FBgn0033317) protein_coding-promoter-TSS (FBgn0033317) -717 FBgn0033317 FBgn0033317 FBtr0088727 CG8635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_167 chr2L 1095648 1095708 + 39 NA intron (FBgn0031299, intron 1 of 7) protein_coding-intron (FBgn0031299, intron 2 of 8) 6826 FBgn0031299 FBgn0031299 FBtr0332571 CG4629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5821 chr2R 17169741 17169820 + 39 NA promoter-TSS (FBgn0034611) protein_coding-promoter-TSS (FBgn0034611) -125 FBgn0034611 FBgn0034611 FBtr0071591 MFS16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13427 chrUextra 28981912 28981967 + 39 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12763 chr3R 27550767 27550831 + 39 NA promoter-TSS (FBgn0003870) protein_coding-promoter-TSS (FBgn0003870) -1325 FBgn0003870 FBgn0003870 FBtr0303228 ttk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5486 chr2R 14261936 14262018 + 39 NA Intergenic Intergenic -3015 FBgn0261700 FBgn0261700 FBtr0303193 CG42736 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8005 chr3L 14104684 14104790 + 39 NA TTS (FBgn0042630) protein_coding-TTS (FBgn0042630) -3519 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1034 chr2L 7956953 7957021 + 39 NA exon (FBgn0085450, exon 2 of 2) protein_coding-exon (FBgn0085450, exon 2 of 2) 20078 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13538 chrX 5206196 5206278 + 38 NA promoter-TSS (FBgn0011761) protein_coding-promoter-TSS (FBgn0011761) -169 FBgn0011761 FBgn0011761 FBtr0070749 dhd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11528 chr3R 21834073 21834339 + 38 NA Intergenic Intergenic -2409 FBgn0002732 FBgn0002732 FBtr0084956 malpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9283 chr3R 2863058 2863492 + 38 NA Intergenic Intergenic -14782 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11886 chr3R 23418596 23418680 + 38 NA intron (FBgn0039527, intron 1 of 4) protein_coding-intron (FBgn0039527, intron 1 of 4) 622 FBgn0039527 FBgn0039527 FBtr0085202 CG5639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9711 chr3R 6440064 6440413 + 38 NA promoter-TSS (FBgn0001235) protein_coding-promoter-TSS (FBgn0001235) -8846 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8577 chr3L 19942610 19942673 + 38 NA TTS (FBgn0052219) protein_coding-TTS (FBgn0052219) 1594 FBgn0052219 FBgn0052219 FBtr0074914 CG32219 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4440 chr2R 5464980 5465066 + 38 NA promoter-TSS (FBgn0033426) protein_coding-promoter-TSS (FBgn0033426) 1489 FBgn0085436 FBgn0085436 FBtr0302122 Not1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10634 chr3R 13342575 13342633 + 38 NA Intergenic Intergenic -11215 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9099 chr3R 1688150 1688226 + 38 NA promoter-TSS (FBgn0037391) protein_coding-promoter-TSS (FBgn0037391) -1169 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5713 chr2R 16161998 16162141 + 38 NA promoter-TSS (FBgn0034495) protein_coding-promoter-TSS (FBgn0034495) -39 FBgn0034494 FBgn0034494 FBtr0086305 CG10444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10275 chr3R 11094329 11094394 + 38 NA promoter-TSS (FBgn0038311) protein_coding-promoter-TSS (FBgn0038311) -44 FBgn0038312 FBgn0038312 FBtr0290018 CG4334 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5734 chr2R 16361305 16361395 + 38 NA exon (FBgn0086604, exon 19 of 21) protein_coding-exon (FBgn0086604, exon 19 of 21) -29770 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4356 chr2R 4888799 4888988 + 38 NA exon (FBgn0085379, exon 2 of 9) protein_coding-exon (FBgn0085379, exon 2 of 9) 5199 FBgn0085379 FBgn0085379 FBtr0112560 CG34350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10411 chr3R 11925562 11925658 + 38 NA intron (FBgn0010379, intron 1 of 6) protein_coding-intron (FBgn0010379, intron 1 of 6) 672 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3941 chr2R 818812 818882 + 38 NA Intergenic Intergenic -18325 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6585 chr2RHet 1990845 1991018 + 38 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10782 chr3R 14299868 14300089 + 38 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) -62625 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10974 chr3R 15615805 15615935 + 38 NA promoter-TSS (FBgn0012004) tRNA-promoter-TSS (FBgn0012004) 26 FBgn0012004 FBgn0012004 FBtr0083792 tRNA:V3b:92Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_1641 chr2L 12373792 12373870 + 38 NA exon (FBgn0262475, exon 2 of 7) protein_coding-exon (FBgn0262475, exon 2 of 7) 17390 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7461 chr3L 8991173 8991322 + 38 NA promoter-TSS (FBgn0035953) protein_coding-promoter-TSS (FBgn0035953) -37 FBgn0035953 FBgn0035953 FBtr0333908 CG5087 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13597 chrX 7827385 7827444 + 38 NA promoter-TSS (FBgn0004403) protein_coding-promoter-TSS (FBgn0004403) -30 FBgn0029980 FBgn0029980 FBtr0071131 CG10778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_400 chr2L 2492843 2492916 + 38 NA promoter-TSS (FBgn0011818) protein_coding-promoter-TSS (FBgn0011818) -76 FBgn0011818 FBgn0011818 FBtr0077779 oaf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7317 chr3L 7504317 7504378 + 38 NA exon (FBgn0035793, exon 1 of 11) protein_coding-exon (FBgn0035793, exon 1 of 11) 261 FBgn0035793 FBgn0035793 FBtr0332143 CG7546 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6841 chr3L 1496616 1496675 + 38 NA promoter-TSS (FBgn0043458) protein_coding-promoter-TSS (FBgn0043458) -2 FBgn0043458 FBgn0043458 FBtr0072711 CG12084 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1079 chr2L 8485658 8485832 + 38 NA promoter-TSS (FBgn0263489) ncRNA-promoter-TSS (FBgn0263489) 20 FBgn0263489 FBgn0263489 FBtr0309788 unsRNA:d-a ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6973 chr3L 3035434 3035495 + 38 NA promoter-TSS (FBgn0035388) protein_coding-promoter-TSS (FBgn0035388) -529 FBgn0035388 FBgn0035388 FBtr0300175 CG2162 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4789 chr2R 8038535 8038610 + 38 NA promoter-TSS (FBgn0027504) protein_coding-promoter-TSS (FBgn0027504) -461 FBgn0027504 FBgn0027504 FBtr0333063 CG8878 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10884 chr3R 15042087 15042154 + 38 NA TTS (FBgn0025680) protein_coding-TTS (FBgn0025680) 4205 FBgn0025680 FBgn0025680 FBtr0083736 cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7807 chr3L 12602403 12602722 + 38 NA promoter-TSS (FBgn0015919) protein_coding-promoter-TSS (FBgn0015919) -169 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13498 chrX 2921806 2921874 + 38 NA intron (FBgn0028369, intron 6 of 10) protein_coding-intron (FBgn0028369, intron 6 of 12) 38756 FBgn0028369 FBgn0028369 FBtr0070560 kirre protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10989 chr3R 15687059 15687127 + 38 NA promoter-TSS (FBgn0038737) protein_coding-promoter-TSS (FBgn0038737) -80 FBgn0261984 FBgn0261984 FBtr0113248 Ire1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13131 chrU 500919 500975 + 38 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8305 chr3L 16831571 16831636 + 38 NA Intergenic Intergenic -3791 FBgn0036666 FBgn0036666 FBtr0075329 TSG101 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8667 chr3L 21872508 21872665 + 37 NA promoter-TSS (FBgn0262737) protein_coding-promoter-TSS (FBgn0262737) 7553 FBgn0264470 FBgn0264470 FBtr0332737 CR43878 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4894 chr2R 8965737 8965809 + 37 NA intron (FBgn0033791, intron 1 of 10) protein_coding-intron (FBgn0033791, intron 1 of 10) 1270 FBgn0033791 FBgn0033791 FBtr0087794 Drl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9654 chr3R 5959327 5959393 + 37 NA intron (FBgn0004889, intron 1 of 4) protein_coding-intron (FBgn0004889, intron 2 of 4) 525 FBgn0004889 FBgn0004889 FBtr0082192 tws protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13782 chrX 17143526 17143588 + 37 NA promoter-TSS (FBgn0030834) protein_coding-promoter-TSS (FBgn0030834) 18 FBgn0030834 FBgn0030834 FBtr0074446 CG8675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5218 chr2R 11739011 11739093 + 37 NA intron (FBgn0034046, intron 1 of 4) protein_coding-intron (FBgn0034046, intron 1 of 4) 2941 FBgn0034046 FBgn0034046 FBtr0087287 tun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7708 chr3L 11911436 11911566 + 37 NA Intergenic Intergenic -3112 FBgn0036221 FBgn0036221 FBtr0076038 CG11588 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3096 chr2L 19795815 19795879 + 37 NA promoter-TSS (FBgn0004811) protein_coding-promoter-TSS (FBgn0004811) 4 FBgn0004811 FBgn0004811 FBtr0332246 fs(2)ltoPP43 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11798 chr3R 23136759 23136821 + 37 NA exon (FBgn0039510, exon 17 of 32) protein_coding-exon (FBgn0039510, exon 17 of 32) 11257 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_874 chr2L 6338783 6338893 + 37 NA promoter-TSS (FBgn0015623) protein_coding-promoter-TSS (FBgn0015623) -167 FBgn0031799 FBgn0031799 FBtr0079284 Pez protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11405 chr3R 19873319 19873376 + 37 NA promoter-TSS (FBgn0043455) protein_coding-promoter-TSS (FBgn0043455) 96 FBgn0005649 FBgn0005649 FBtr0333200 Rox8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2563 chr2L 16980350 16980409 + 37 NA intron (FBgn0053179, intron 2 of 6) protein_coding-intron (FBgn0053179, intron 2 of 6) -4599 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9493 chr3R 4468081 4468180 + 37 NA promoter-TSS (FBgn0012028) tRNA-promoter-TSS (FBgn0012028) 17 FBgn0012028 FBgn0012028 FBtr0081895 tRNA:Y1:85Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_10670 chr3R 13570634 13570847 + 37 NA exon (FBgn0038541, exon 5 of 5) protein_coding-exon (FBgn0038541, exon 5 of 5) 8407 FBgn0038541 FBgn0038541 FBtr0083512 TyrRII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6995 chr3L 3433200 3433274 + 37 NA intron (FBgn0026259, intron 7 of 8) protein_coding-intron (FBgn0026259, intron 7 of 8) -15310 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4052 chr2R 2389053 2389552 + 37 NA promoter-TSS (FBgn0086655) protein_coding-promoter-TSS (FBgn0086655) 31798 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12708 chr3R 27246476 27246547 + 37 NA intron (FBgn0261988, intron 2 of 12) protein_coding-intron (FBgn0261988, intron 2 of 12) 15540 FBgn0261988 FBgn0261988 FBtr0085788 Gprk2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11239 chr3R 17536577 17536640 + 37 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) 8772 FBgn0051176 FBgn0051176 FBtr0084114 CG31176 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2360 chr2L 15912624 15912755 + 37 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) -4199 FBgn0032577 FBgn0032577 FBtr0080792 CG13244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9850 chr3R 7575791 7575877 + 37 NA promoter-TSS (FBgn0037944) protein_coding-promoter-TSS (FBgn0037944) -221 FBgn0262364 FBgn0262364 FBtr0304646 CG43062 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4040 chr2R 2057094 2057187 + 37 NA promoter-TSS (FBgn0011956) tRNA-promoter-TSS (FBgn0011956) 28 FBgn0011956 FBgn0011956 FBtr0085985 tRNA:R2:42Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_4148 chr2R 3306671 3306912 + 37 NA exon (FBgn0003460, exon 1 of 7) protein_coding-exon (FBgn0003460, exon 1 of 7) 254 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5012 chr2R 9895949 9896020 + 37 NA promoter-TSS (FBgn0002643) protein_coding-promoter-TSS (FBgn0002643) -2498 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4519 chr2R 6117274 6117331 + 37 NA intron (FBgn0000448, intron 1 of 8) protein_coding-intron (FBgn0000448, intron 1 of 8) -1844 FBgn0000448 FBgn0000448 FBtr0306346 Hr46 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3770 chr2L 22597148 22597208 + 37 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 47349 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13393 chrUextra 23503161 23503217 + 37 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5060 chr2R 10368596 10368727 + 37 NA promoter-TSS (FBgn0001332) protein_coding-promoter-TSS (FBgn0001332) -55 FBgn0001332 FBgn0001332 FBtr0087492 L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5854 chr2R 17448914 17448976 + 37 NA exon (FBgn0034636, exon 5 of 5) protein_coding-exon (FBgn0034636, exon 5 of 5) 13871 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4141 chr2R 3283416 3283503 + 37 NA promoter-TSS (FBgn0033162) protein_coding-promoter-TSS (FBgn0033162) -22 FBgn0033162 FBgn0033162 FBtr0089013 CG1707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8984 chr3R 678079 678487 + 37 NA promoter-TSS (FBgn0003002) protein_coding-promoter-TSS (FBgn0003002) -252 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3428 chr2L 21670972 21671027 + 37 NA promoter-TSS (FBgn0032957) protein_coding-promoter-TSS (FBgn0032957) 6531 FBgn0032957 FBgn0032957 FBtr0085917 CG2225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5164 chr2R 11236968 11237160 + 37 NA promoter-TSS (FBgn0034013) protein_coding-promoter-TSS (FBgn0034013) -595 FBgn0034013 FBgn0034013 FBtr0087382 unc-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10837 chr3R 14665003 14665059 + 37 NA intron (FBgn0038653, intron 1 of 3) protein_coding-intron (FBgn0038653, intron 1 of 2) 9915 FBgn0038653 FBgn0038653 FBtr0332809 CG18208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9597 chr3R 5230034 5230100 + 37 NA promoter-TSS (FBgn0037689) protein_coding-promoter-TSS (FBgn0037689) -30 FBgn0260237 FBgn0260237 FBtr0300646 CG42511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6871 chr3L 1865396 1865474 + 37 NA promoter-TSS (FBgn0035285) protein_coding-promoter-TSS (FBgn0035285) 5 FBgn0035285 FBgn0035285 FBtr0072834 CG12025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12268 chr3R 24973962 24974032 + 37 NA promoter-TSS (FBgn0014869) protein_coding-promoter-TSS (FBgn0014869) -103 FBgn0039642 FBgn0039642 FBtr0085411 CG11882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5256 chr2R 12107161 12107223 + 37 NA promoter-TSS (FBgn0050239) tRNA-promoter-TSS (FBgn0050239) 49 FBgn0050239 FBgn0050239 FBtr0087128 tRNA:CR30239 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8519 chr3L 18614871 18614955 + 37 NA promoter-TSS (FBgn0259791) protein_coding-promoter-TSS (FBgn0259791) 316 FBgn0013717 FBgn0013717 FBtr0290259 not protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11390 chr3R 19604883 19606888 + 37 NA exon (FBgn0039120, exon 2 of 9) protein_coding-exon (FBgn0039120, exon 2 of 9) 1246 FBgn0039120 FBgn0039120 FBtr0304567 Nup98-96 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9930 chr3R 8214742 8214917 + 37 NA TTS (FBgn0053098) protein_coding-TTS (FBgn0053098) 257 FBgn0085431 FBgn0085431 FBtr0112656 CG34402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5306 chr2R 12473298 12473395 + 37 NA promoter-TSS (FBgn0003274) protein_coding-promoter-TSS (FBgn0003274) -253 FBgn0003274 FBgn0003274 FBtr0087105 RpLP2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8069 chr3L 14591619 14591676 + 36 NA exon (FBgn0040318, exon 1 of 4) protein_coding-exon (FBgn0040318, exon 1 of 4) 993 FBgn0040318 FBgn0040318 FBtr0075720 HGTX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5163 chr2R 11227139 11227378 + 36 NA TTS (FBgn0034012) protein_coding-TTS (FBgn0034012) 8152 FBgn0034012 FBgn0034012 FBtr0114456 Hr51 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13342 chrUextra 4762654 4762708 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9288 chr3R 2932880 2932953 + 36 NA exon (FBgn0261238, exon 1 of 6) protein_coding-exon (FBgn0261238, exon 1 of 6) 1223 FBgn0261238 FBgn0261238 FBtr0081614 Alh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10203 chr3R 10349398 10349487 + 36 NA TTS (FBgn0038236) protein_coding-TTS (FBgn0038236) 2671 FBgn0038236 FBgn0038236 FBtr0082954 Cyp313a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8340 chr3L 17147725 17147824 + 36 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -12189 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_164 chr2L 1077800 1077914 + 36 NA promoter-TSS (FBgn0015905) protein_coding-promoter-TSS (FBgn0015905) -46 FBgn0003310 FBgn0003310 FBtr0077994 S protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11966 chr3R 23742205 23742267 + 36 NA promoter-TSS (FBgn0039555) protein_coding-promoter-TSS (FBgn0039555) 13 FBgn0039554 FBgn0039554 FBtr0085272 CG5003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4291 chr2R 4519285 4519534 + 36 NA promoter-TSS (FBgn0033317) protein_coding-promoter-TSS (FBgn0033317) 58 FBgn0033317 FBgn0033317 FBtr0088727 CG8635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7023 chr3L 4034448 4034505 + 36 NA TTS (FBgn0035486) protein_coding-TTS (FBgn0035486) 709 FBgn0045476 FBgn0045476 FBtr0073200 Gr64e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2650 chr2L 17271833 17271894 + 36 NA Intergenic Intergenic -11131 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8458 chr3L 18012888 18012957 + 36 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -16744 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3558 chr2L 21996385 21996446 + 36 NA Intergenic Intergenic -3482 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4563 chr2R 6310776 6310838 + 36 NA TTS (FBgn0053474) protein_coding-TTS (FBgn0053474) 1069 FBgn0053474 FBgn0053474 FBtr0088260 CG33474 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_287 chr2L 1510877 1511262 + 36 NA Intergenic Intergenic 6409 FBgn0031345 FBgn0031345 FBtr0077919 CG18132 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4038 chr2R 2053467 2053752 + 36 NA promoter-TSS (FBgn0011880) tRNA-promoter-TSS (FBgn0011880) -47 FBgn0011880 FBgn0011880 FBtr0085984 tRNA:I:42A tRNA Nup98-S2-pascual-garcia2017_R1_peak_5142 chr2R 11017101 11017446 + 36 NA intron (FBgn0015371, intron 1 of 5) protein_coding-intron (FBgn0015371, intron 1 of 4) 14511 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2671 chr2L 17351100 17351166 + 36 NA Intergenic Intergenic 3535 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4233 chr2R 4051004 4051080 + 36 NA promoter-TSS (FBgn0033272) protein_coding-promoter-TSS (FBgn0033272) -24 FBgn0033272 FBgn0033272 FBtr0088807 RagC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9423 chr3R 3965239 3965346 + 36 NA promoter-TSS (FBgn0051583) tRNA-promoter-TSS (FBgn0051583) 36 FBgn0051583 FBgn0051583 FBtr0081814 tRNA:N5:84F tRNA Nup98-S2-pascual-garcia2017_R1_peak_2071 chr2L 14746035 14746092 + 36 NA promoter-TSS (FBgn0260955) protein_coding-promoter-TSS (FBgn0260955) -853 FBgn0260955 FBgn0260955 FBtr0301742 CG42587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8529 chr3L 18764590 18764870 + 36 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -5886 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5644 chr2R 15688047 15688106 + 36 NA Intergenic Intergenic -2020 FBgn0011897 FBgn0011897 FBtr0086334 tRNA:K2:56EF tRNA Nup98-S2-pascual-garcia2017_R1_peak_5264 chr2R 12152140 12152206 + 36 NA promoter-TSS (FBgn0025519) protein_coding-promoter-TSS (FBgn0025519) -7 FBgn0015925 FBgn0015925 FBtr0089872 csul protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5335 chr2R 12744747 12745039 + 36 NA promoter-TSS (FBgn0263462) snoRNA-promoter-TSS (FBgn0263462) -25 FBgn0263462 FBgn0263462 FBtr0309761 snoRNA:Dek-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_9949 chr3R 8422606 8422697 + 36 NA Intergenic Intergenic 30785 FBgn0005671 FBgn0005671 FBtr0301661 Vha55 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8415 chr3L 17605067 17605145 + 36 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 7319 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10495 chr3R 12405933 12406012 + 36 NA intron (FBgn0020907, intron 1 of 4) protein_coding-intron (FBgn0020907, intron 1 of 4) 3410 FBgn0020907 FBgn0020907 FBtr0083361 Scp2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13423 chrUextra 28735957 28736047 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11427 chr3R 20477063 20477142 + 36 NA promoter-TSS (FBgn0000139) protein_coding-promoter-TSS (FBgn0000139) 200 FBgn0000139 FBgn0000139 FBtr0084659 ash2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13331 chrUextra 1774360 1774434 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2447 chr2L 16280072 16280126 + 36 NA intron (FBgn0001994, intron 1 of 2) protein_coding-intron (FBgn0001994, intron 1 of 2) 7629 FBgn0001994 FBgn0001994 FBtr0080854 crp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10614 chr3R 13197119 13197254 + 36 NA Intergenic Intergenic -5347 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4051 chr2R 2381956 2382058 + 36 NA Intergenic Intergenic 39093 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11536 chr3R 21861927 21862208 + 36 NA promoter-TSS (FBgn0002633) protein_coding-promoter-TSS (FBgn0002633) -693 FBgn0002633 FBgn0002633 FBtr0084960 HLHm7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13470 chrX 1666759 1666908 + 36 NA promoter-TSS (FBgn0026086) protein_coding-promoter-TSS (FBgn0026086) -919 FBgn0026086 FBgn0026086 FBtr0309961 Adar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2535 chr2L 16868835 16869038 + 36 NA promoter-TSS (FBgn0051781) ncRNA-promoter-TSS (FBgn0051781) -551 FBgn0051781 FBgn0051781 FBtr0308928 CR31781 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1983 chr2L 14440516 14440570 + 36 NA Intergenic Intergenic 10379 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8457 chr3L 17983163 17983308 + 36 NA intron (FBgn0000568, intron 4 of 7) protein_coding-intron (FBgn0000568, intron 2 of 5) 12943 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5396 chr2R 13480689 13480748 + 36 NA promoter-TSS (FBgn0050105) protein_coding-promoter-TSS (FBgn0050105) 422 FBgn0029006 FBgn0029006 FBtr0086833 lack protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7220 chr3L 6735359 6735583 + 36 NA intron (FBgn0261934, intron 1 of 9) protein_coding-intron (FBgn0261934, intron 1 of 4) 793 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3864 chr2LHet 41317 41371 + 36 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11679 chr3R 22481112 22481385 + 36 NA promoter-TSS (FBgn0243586) protein_coding-promoter-TSS (FBgn0243586) -920 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7773 chr3L 12407955 12408029 + 36 NA promoter-TSS (FBgn0052103) protein_coding-promoter-TSS (FBgn0052103) -50 FBgn0052103 FBgn0052103 FBtr0332089 CG32103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9204 chr3R 2504385 2504451 + 36 NA promoter-TSS (FBgn0002522) protein_coding-promoter-TSS (FBgn0002522) -5754 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8555 chr3L 19253759 19253826 + 36 NA promoter-TSS (FBgn0260857) protein_coding-promoter-TSS (FBgn0260857) -13 FBgn0026630 FBgn0026630 FBtr0075020 nes protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2760 chr2L 17804797 17804875 + 35 NA intron (FBgn0262018, intron 7 of 14) protein_coding-intron (FBgn0262018, intron 6 of 13) 7836 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11278 chr3R 17919871 17919932 + 35 NA intron (FBgn0038930, intron 1 of 2) protein_coding-intron (FBgn0038930, intron 1 of 2) 7046 FBgn0040582 FBgn0040582 FBtr0084180 CG5791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3852 chr2L 22918822 22918881 + 35 NA promoter-TSS (FBgn0250907) protein_coding-promoter-TSS (FBgn0250907) -291 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7186 chr3L 6377333 6377389 + 35 NA Intergenic Intergenic -16331 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5979 chr2R 18404824 18404883 + 35 NA intron (FBgn0003175, intron 12 of 14) protein_coding-intron (FBgn0003175, intron 12 of 13) 25151 FBgn0034735 FBgn0034735 FBtr0071834 CG4610 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11458 chr3R 21061256 21061324 + 35 NA promoter-TSS (FBgn0039296) protein_coding-promoter-TSS (FBgn0039296) -50 FBgn0039296 FBgn0039296 FBtr0084870 CG10420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1015 chr2L 7782833 7782894 + 35 NA promoter-TSS (FBgn0031947) protein_coding-promoter-TSS (FBgn0031947) 6 FBgn0031947 FBgn0031947 FBtr0079488 CG7154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_44 chr2L 610707 610778 + 35 NA Intergenic Intergenic -1608 FBgn0263658 FBgn0263658 FBtr0310101 CR43649 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13153 chrU 1233392 1233453 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12448 chr3R 25632466 25632532 + 35 NA promoter-TSS (FBgn0000247) protein_coding-promoter-TSS (FBgn0000247) 350 FBgn0002924 FBgn0002924 FBtr0085534 ncd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10598 chr3R 13079663 13079825 + 35 NA Intergenic Intergenic -6146 FBgn0038494 FBgn0038494 FBtr0083411 beat-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12162 chr3R 24510374 24510428 + 35 NA intron (FBgn0039594, intron 1 of 10) protein_coding-intron (FBgn0039594, intron 1 of 9) 2338 FBgn0039594 FBgn0039594 FBtr0305087 CG9990 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5907 chr2R 17771890 17772150 + 35 NA intron (FBgn0085397, intron 1 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 1203 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13403 chrUextra 26488724 26488835 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9410 chr3R 3833820 3833893 + 35 NA promoter-TSS (FBgn0037537) protein_coding-promoter-TSS (FBgn0037537) -15 FBgn0037537 FBgn0037537 FBtr0290325 CG2767 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7670 chr3L 11597285 11597427 + 35 NA exon (FBgn0036179, exon 4 of 4) protein_coding-exon (FBgn0036179, exon 4 of 4) 2825 FBgn0036179 FBgn0036179 FBtr0307115 CG7368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13293 chrUextra 188073 188253 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7827 chr3L 12721713 12721769 + 35 NA Intergenic Intergenic 5970 FBgn0261933 FBgn0261933 FBtr0075952 SmD1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4707 chr2R 7545353 7545533 + 35 NA intron (FBgn0044020, intron 3 of 3) protein_coding-intron (FBgn0044020, intron 2 of 2) 2697 FBgn0011916 FBgn0011916 FBtr0088086 tRNA:M2:48Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_2000 chr2L 14472761 14472820 + 35 NA Intergenic Intergenic -18072 FBgn0005771 FBgn0005771 FBtr0080643 noc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12889 chr3RHet 2073731 2073889 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13590 chrX 7199794 7199883 + 35 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -2136 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3706 chr2L 22359046 22359108 + 35 NA intron (FBgn0039972, intron 3 of 8) protein_coding-intron (FBgn0039972, intron 1 of 6) 4722 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5253 chr2R 12094230 12094300 + 35 NA promoter-TSS (FBgn0034091) protein_coding-promoter-TSS (FBgn0034091) 946 FBgn0050237 FBgn0050237 FBtr0087198 tRNA:CR30237 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5063 chr2R 10404581 10404718 + 35 NA Intergenic Intergenic -1936 FBgn0033942 FBgn0033942 FBtr0087514 Cpr51A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4434 chr2R 5415920 5416079 + 35 NA exon (FBgn0259246, exon 11 of 22) protein_coding-exon (FBgn0259246, exon 11 of 22) 19641 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8282 chr3L 16584175 16584241 + 35 NA promoter-TSS (FBgn0003741) protein_coding-promoter-TSS (FBgn0003741) -58 FBgn0003741 FBgn0003741 FBtr0100244 tra protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12402 chr3R 25516922 25517100 + 35 NA Intergenic Intergenic -1302 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13609 chrX 8502332 8502394 + 35 NA Intergenic Intergenic -2028 FBgn0030054 FBgn0030054 FBtr0071228 Caf1-180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2933 chr2L 18769352 18769418 + 35 NA intron (FBgn0045852, intron 4 of 6) protein_coding-intron (FBgn0045852, intron 5 of 7) 4452 FBgn0264348 FBgn0264348 FBtr0332018 CR43804 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13327 chrUextra 956598 956767 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8416 chr3L 17605401 17605630 + 35 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 6910 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3576 chr2L 22024430 22024740 + 35 NA TTS (FBgn0028979) protein_coding-TTS (FBgn0028979) 4550 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4939 chr2R 9320154 9320261 + 35 NA promoter-TSS (FBgn0050065) protein_coding-promoter-TSS (FBgn0050065) 34 FBgn0011910 FBgn0011910 FBtr0089302 tRNA:L3:49Fb tRNA Nup98-S2-pascual-garcia2017_R1_peak_11221 chr3R 17346613 17346678 + 35 NA promoter-TSS (FBgn0038890) protein_coding-promoter-TSS (FBgn0038890) -22 FBgn0038890 FBgn0038890 FBtr0301212 CG7956 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13424 chrUextra 28740181 28740235 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9833 chr3R 7383185 7383253 + 35 NA promoter-TSS (FBgn0037911) protein_coding-promoter-TSS (FBgn0037911) -232 FBgn0037911 FBgn0037911 FBtr0082410 CG10898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13401 chrUextra 25742666 25742720 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9255 chr3R 2733933 2733999 + 35 NA exon (FBgn0260642, exon 5 of 5) protein_coding-exon (FBgn0260642, exon 5 of 5) -3562 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13417 chrUextra 28551716 28551788 + 35 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4147 chr2R 3305843 3306316 + 35 NA promoter-TSS (FBgn0003460) protein_coding-promoter-TSS (FBgn0003460) -458 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10517 chr3R 12528567 12528889 + 35 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) 31620 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2474 chr2L 16486081 16486580 + 35 NA promoter-TSS (FBgn0005677) protein_coding-promoter-TSS (FBgn0005677) -346 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2948 chr2L 18974247 18974390 + 35 NA promoter-TSS (FBgn0032730) protein_coding-promoter-TSS (FBgn0032730) 130 FBgn0032729 FBgn0032729 FBtr0081186 CG10639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5219 chr2R 11761803 11761873 + 35 NA exon (FBgn0264089, exon 18 of 20) protein_coding-exon (FBgn0264089, exon 18 of 20) -5188 FBgn0050085 FBgn0050085 FBtr0087306 CG30085 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8754 chr3L 23590147 23590204 + 35 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 41150 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13514 chrX 3625782 3625982 + 35 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -12217 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10530 chr3R 12608289 12608363 + 35 NA Intergenic Intergenic -5707 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9929 chr3R 8195073 8195138 + 34 NA promoter-TSS (FBgn0001149) protein_coding-promoter-TSS (FBgn0001149) -688 FBgn0001149 FBgn0001149 FBtr0082607 GstD1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13353 chrUextra 8920258 8920326 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6410 chr2RHet 787517 787609 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11202 chr3R 17245289 17245346 + 34 NA intron (FBgn0008651, intron 1 of 3) protein_coding-intron (FBgn0008651, intron 1 of 2) 10472 FBgn0051438 FBgn0051438 FBtr0084090 CheB93b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10933 chr3R 15412049 15412280 + 34 NA TTS (FBgn0065080) snoRNA-TTS (FBgn0065080) 246 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8948 chr3R 223598 223657 + 34 NA promoter-TSS (FBgn0037242) protein_coding-promoter-TSS (FBgn0037242) -18 FBgn0037242 FBgn0037242 FBtr0078950 CG9855 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1053 chr2L 8140451 8140588 + 34 NA exon (FBgn0031990, exon 2 of 7) protein_coding-exon (FBgn0031990, exon 2 of 7) 1070 FBgn0263561 FBgn0263561 FBtr0309701 mir-4984 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12896 chr3RHet 2101423 2101490 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1667 chr2L 12609990 12610158 + 34 NA TTS (FBgn0032439) protein_coding-TTS (FBgn0032439) -8274 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4570 chr2R 6444708 6444773 + 34 NA promoter-TSS (FBgn0263102) protein_coding-promoter-TSS (FBgn0263102) -653 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9427 chr3R 3968312 3968410 + 34 NA Intergenic Intergenic -1597 FBgn0011959 FBgn0011959 FBtr0081809 tRNA:R2:84Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_12228 chr3R 24756118 24756290 + 34 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 7438 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12303 chr3R 25170391 25170465 + 34 NA Intergenic Intergenic -25092 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3375 chr2L 21294633 21294721 + 34 NA exon (FBgn0264556, exon 1 of 4) protein_coding-exon (FBgn0264556, exon 1 of 4) -1637 FBgn0264556 FBgn0264556 FBtr0081511 Gr39a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6149 chr2R 19890591 19890650 + 34 NA exon (FBgn0053519, exon 18 of 35) protein_coding-exon (FBgn0053519, exon 18 of 35) -8047 FBgn0034951 FBgn0034951 FBtr0072201 CG3860 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1140 chr2L 8640180 8640239 + 34 NA intron (FBgn0011259, intron 4 of 20) protein_coding-intron (FBgn0011259, intron 4 of 21) 20181 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7749 chr3L 12260563 12260626 + 34 NA promoter-TSS (FBgn0052100) protein_coding-promoter-TSS (FBgn0052100) -34 FBgn0052100 FBgn0052100 FBtr0076006 CG32100 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11706 chr3R 22543073 22543149 + 34 NA promoter-TSS (FBgn0039450) protein_coding-promoter-TSS (FBgn0039450) -4 FBgn0039449 FBgn0039449 FBtr0085047 CG6425 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9392 chr3R 3697506 3697564 + 34 NA exon (FBgn0037525, exon 4 of 15) protein_coding-exon (FBgn0037525, exon 4 of 15) 14920 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6730 chr3L 610918 611026 + 34 NA Intergenic Intergenic -4403 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2917 chr2L 18677172 18677239 + 34 NA promoter-TSS (FBgn0086909) protein_coding-promoter-TSS (FBgn0086909) -207 FBgn0086681 FBgn0086681 FBtr0305341 Mst36Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4491 chr2R 5837256 5837365 + 34 NA intron (FBgn0011656, intron 1 of 9) protein_coding-intron (FBgn0011656, intron 1 of 9) 9040 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3355 chr2L 21218540 21218596 + 34 NA promoter-TSS (FBgn0032934) protein_coding-promoter-TSS (FBgn0032934) -24 FBgn0032934 FBgn0032934 FBtr0081488 CG8679 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11697 chr3R 22522451 22522519 + 34 NA TTS (FBgn0023179) protein_coding-TTS (FBgn0023179) -3240 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11213 chr3R 17285850 17285944 + 34 NA Intergenic Intergenic -5526 FBgn0263407 FBgn0263407 FBtr0309186 CR43453 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7110 chr3L 5804016 5804096 + 34 NA promoter-TSS (FBgn0035639) protein_coding-promoter-TSS (FBgn0035639) -17 FBgn0035639 FBgn0035639 FBtr0310534 CG5537 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10202 chr3R 10337195 10337254 + 34 NA promoter-TSS (FBgn0038234) protein_coding-promoter-TSS (FBgn0038234) 210 FBgn0038233 FBgn0038233 FBtr0082987 HtrA2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12489 chr3R 25872608 25872662 + 34 NA promoter-TSS (FBgn0039741) protein_coding-promoter-TSS (FBgn0039741) -9 FBgn0039741 FBgn0039741 FBtr0085560 CG7943 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11085 chr3R 16216005 16216070 + 34 NA exon (FBgn0262869, exon 11 of 20) protein_coding-exon (FBgn0262869, exon 11 of 20) 17531 FBgn0038795 FBgn0038795 FBtr0083894 CG4335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6135 chr2R 19660543 19660599 + 34 NA intron (FBgn0034903, intron 4 of 13) protein_coding-intron (FBgn0034903, intron 4 of 13) 18148 FBgn0034904 FBgn0034904 FBtr0072245 CG15800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7637 chr3L 11085438 11085514 + 34 NA promoter-TSS (FBgn0020412) protein_coding-promoter-TSS (FBgn0020412) 817 FBgn0020412 FBgn0020412 FBtr0076236 JIL-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4855 chr2R 8701898 8701960 + 34 NA Intergenic Intergenic 7747 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11215 chr3R 17313669 17313723 + 34 NA TTS (FBgn0038889) protein_coding-TTS (FBgn0038889) 5649 FBgn0038889 FBgn0038889 FBtr0084109 CG7922 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9389 chr3R 3684994 3685054 + 34 NA exon (FBgn0037525, exon 14 of 15) protein_coding-exon (FBgn0037525, exon 14 of 15) 27431 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7823 chr3L 12686590 12686676 + 34 NA promoter-TSS (FBgn0014343) protein_coding-promoter-TSS (FBgn0014343) -106 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8393 chr3L 17480273 17480349 + 34 NA promoter-TSS (FBgn0036732) protein_coding-promoter-TSS (FBgn0036732) 93 FBgn0036732 FBgn0036732 FBtr0302041 Oatp74D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13672 chrX 12618344 12618615 + 34 NA intron (FBgn0264678, intron 1 of 1) protein_coding-intron (FBgn0263865, intron 2 of 9) -5986 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12447 chr3R 25628651 25628722 + 34 NA promoter-TSS (FBgn0039698) protein_coding-promoter-TSS (FBgn0039698) -120 FBgn0039697 FBgn0039697 FBtr0085536 CG7834 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5689 chr2R 15998602 15998935 + 34 NA promoter-TSS (FBgn0004364) protein_coding-promoter-TSS (FBgn0004364) -248 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8779 chr3L 23781524 23781578 + 34 NA Intergenic Intergenic 4220 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3622 chr2L 22099574 22099650 + 34 NA Intergenic Intergenic 4789 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3746 chr2L 22539410 22539491 + 34 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 66968 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13299 chrUextra 205975 207895 + 34 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11485 chr3R 21690459 21690518 + 34 NA Intergenic Intergenic -2334 FBgn0039380 FBgn0039380 FBtr0301147 CG5890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10636 chr3R 13360299 13360394 + 34 NA promoter-TSS (FBgn0038515) protein_coding-promoter-TSS (FBgn0038515) -49 FBgn0038515 FBgn0038515 FBtr0321266 CG5823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13600 chrX 7986261 7986331 + 34 NA promoter-TSS (FBgn0029996) protein_coding-promoter-TSS (FBgn0029996) -171 FBgn0029996 FBgn0029996 FBtr0071114 Ubc-E2H protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11320 chr3R 18373537 18373632 + 34 NA promoter-TSS (FBgn0038984) protein_coding-promoter-TSS (FBgn0038984) -17 FBgn0038984 FBgn0038984 FBtr0084284 CG5315 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9209 chr3R 2527792 2527882 + 34 NA exon (FBgn0004782, exon 2 of 2) protein_coding-exon (FBgn0004782, exon 2 of 2) 762 FBgn0004782 FBgn0004782 FBtr0081692 Ccp84Ab protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7778 chr3L 12427676 12427892 + 34 NA Intergenic Intergenic -2016 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6751 chr3L 633484 633578 + 34 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 4510 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5252 chr2R 12066291 12066356 + 34 NA promoter-TSS (FBgn0015754) protein_coding-promoter-TSS (FBgn0015754) -8 FBgn0015754 FBgn0015754 FBtr0087241 Lis-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3788 chr2L 22629887 22629948 + 33 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 14610 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4180 chr2R 3586408 3586484 + 33 NA promoter-TSS (FBgn0050493) protein_coding-promoter-TSS (FBgn0050493) -39 FBgn0033212 FBgn0033212 FBtr0088940 CG1399 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5399 chr2R 13504087 13504446 + 33 NA promoter-TSS (FBgn0082922) snoRNA-promoter-TSS (FBgn0082922) 5 FBgn0082922 FBgn0082922 FBtr0113512 snoRNA:Or-aca4 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8115 chr3L 15101196 15101286 + 33 NA exon (FBgn0264702, exon 2 of 2) ncRNA-exon (FBgn0264702, exon 2 of 2) 794 FBgn0264702 FBgn0264702 FBtr0333936 CR43971 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13356 chrUextra 9849072 9849130 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8756 chr3L 23604374 23604428 + 33 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 55376 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1398 chr2L 9918154 9918221 + 33 NA promoter-TSS (FBgn0032160) protein_coding-promoter-TSS (FBgn0032160) -11 FBgn0025700 FBgn0025700 FBtr0079900 CG5885 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11274 chr3R 17742511 17742566 + 33 NA Intergenic Intergenic 3067 FBgn0038919 FBgn0038919 FBtr0084150 CG17843 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6238 chr2R 20604384 20604451 + 33 NA intron (FBgn0053988, intron 2 of 5) protein_coding-intron (FBgn0053988, intron 2 of 5) 19763 FBgn0053988 FBgn0053988 FBtr0100033 CG33988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4817 chr2R 8304002 8304056 + 33 NA promoter-TSS (FBgn0033732) protein_coding-promoter-TSS (FBgn0033732) 69 FBgn0033732 FBgn0033732 FBtr0087925 CG13157 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9232 chr3R 2618689 2618794 + 33 NA exon (FBgn0000439, exon 1 of 5) protein_coding-exon (FBgn0000439, exon 1 of 5) 1183 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10840 chr3R 14681027 14681082 + 33 NA Intergenic Intergenic -3534 FBgn0051226 FBgn0051226 FBtr0083676 CG31226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13391 chrUextra 22966456 22966510 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9723 chr3R 6500985 6501065 + 33 NA TTS (FBgn0037818) protein_coding-TTS (FBgn0037818) 1867 FBgn0037818 FBgn0037818 FBtr0082323 CG6465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_700 chr2L 4821659 4821725 + 33 NA promoter-TSS (FBgn0031632) protein_coding-promoter-TSS (FBgn0031632) -84 FBgn0031632 FBgn0031632 FBtr0077384 CG15628 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4443 chr2R 5474626 5474683 + 33 NA promoter-TSS (FBgn0025286) protein_coding-promoter-TSS (FBgn0025286) -292 FBgn0025286 FBgn0025286 FBtr0088527 RpL31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13579 chrX 6892743 6892814 + 33 NA promoter-TSS (FBgn0027108) protein_coding-promoter-TSS (FBgn0027108) 73 FBgn0027108 FBgn0027108 FBtr0301860 inx2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12499 chr3R 25979754 25979817 + 33 NA TTS (FBgn0039748) protein_coding-TTS (FBgn0039748) 2004 FBgn0039748 FBgn0039748 FBtr0085567 CG15529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10921 chr3R 15316878 15316933 + 33 NA promoter-TSS (FBgn0038709) protein_coding-promoter-TSS (FBgn0038709) -68 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4864 chr2R 8780339 8780494 + 33 NA exon (FBgn0003975, exon 4 of 8) protein_coding-exon (FBgn0003975, exon 4 of 8) 8710 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4964 chr2R 9561574 9561628 + 33 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 6360 FBgn0033864 FBgn0033864 FBtr0087627 CG18368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5747 chr2R 16476029 16476106 + 33 NA intron (FBgn0015907, intron 1 of 8) protein_coding-intron (FBgn0015907, intron 1 of 8) 1057 FBgn0015907 FBgn0015907 FBtr0086222 bl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_735 chr2L 5306748 5306820 + 33 NA intron (FBgn0016076, intron 1 of 2) protein_coding-intron (FBgn0016076, intron 1 of 2) 1062 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10552 chr3R 12725206 12725304 + 33 NA intron (FBgn0263610, intron 2 of 7) ncRNA-intron (FBgn0263610, intron 2 of 7) 7123 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3080 chr2L 19715290 19715356 + 33 NA intron (FBgn0000464, intron 11 of 18) protein_coding-intron (FBgn0000464, intron 8 of 16) -14355 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6859 chr3L 1709300 1709355 + 33 NA intron (FBgn0035260, intron 2 of 3) protein_coding-intron (FBgn0035260, intron 2 of 3) -6920 FBgn0035258 FBgn0035258 FBtr0072802 CG13931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13628 chrX 9478443 9478828 + 33 NA Intergenic Intergenic -1288 FBgn0001186 FBgn0001186 FBtr0071362 Hex-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11317 chr3R 18320622 18320697 + 33 NA Intergenic Intergenic 1928 FBgn0038979 FBgn0038979 FBtr0084259 CG7046 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11809 chr3R 23153897 23153979 + 33 NA Intergenic Intergenic 2666 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2959 chr2L 19081517 19081594 + 33 NA exon (FBgn0002023, exon 4 of 8) protein_coding-exon (FBgn0002023, exon 4 of 8) -2527 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12977 chr4 887639 887727 + 33 NA promoter-TSS (FBgn0039936) protein_coding-promoter-TSS (FBgn0039936) -31 FBgn0039936 FBgn0039936 FBtr0300886 CG11148 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_627 chr2L 4356890 4356959 + 33 NA Intergenic Intergenic 3949 FBgn0031596 FBgn0031596 FBtr0077428 CG15429 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3362 chr2L 21250473 21251117 + 33 NA intron (FBgn0261239, intron 2 of 7) protein_coding-intron (FBgn0261239, intron 2 of 4) -10373 FBgn0021856 FBgn0021856 FBtr0081482 l(2)k14505 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7349 chr3L 7857279 7857363 + 33 NA intron (FBgn0016694, intron 1 of 5) protein_coding-intron (FBgn0016694, intron 1 of 4) 3148 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13739 chrX 14064859 14064913 + 33 NA TTS (FBgn0030538) protein_coding-TTS (FBgn0030538) 1258 FBgn0030537 FBgn0030537 FBtr0073868 CG12480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11453 chr3R 20992891 20992968 + 33 NA Intergenic Intergenic -17176 FBgn0039286 FBgn0039286 FBtr0330288 dan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10413 chr3R 11935274 11935328 + 33 NA Intergenic Intergenic 10363 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6338 chr2RHet 408858 408924 + 33 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8460 chr3L 18019183 18019294 + 33 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -14179 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_546 chr2L 3738066 3738241 + 33 NA intron (FBgn0031568, intron 1 of 12) protein_coding-intron (FBgn0031568, intron 1 of 12) 7687 FBgn0031568 FBgn0031568 FBtr0273188 CG10019 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5545 chr2R 14798841 14798900 + 33 NA exon (FBgn0028669, exon 1 of 1) protein_coding-exon (FBgn0028669, exon 1 of 1) 349 FBgn0028669 FBgn0028669 FBtr0086602 Vha100-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7292 chr3L 7243591 7243656 + 33 NA promoter-TSS (FBgn0035754) protein_coding-promoter-TSS (FBgn0035754) 4 FBgn0035754 FBgn0035754 FBtr0076889 MED4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_255 chr2L 1420356 1420598 + 33 NA promoter-TSS (FBgn0002543) protein_coding-promoter-TSS (FBgn0002543) -28 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10542 chr3R 12655908 12655988 + 33 NA promoter-TSS (FBgn0000014) protein_coding-promoter-TSS (FBgn0000014) -181 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13753 chrX 15227335 15227462 + 33 NA promoter-TSS (FBgn0026428) protein_coding-promoter-TSS (FBgn0026428) 55 FBgn0026428 FBgn0026428 FBtr0301774 HDAC6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13813 chrX 18541594 18541662 + 33 NA promoter-TSS (FBgn0030943) protein_coding-promoter-TSS (FBgn0030943) -32 FBgn0027335 FBgn0027335 FBtr0301545 Rip11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4937 chr2R 9317781 9317880 + 33 NA promoter-TSS (FBgn0011882) tRNA-promoter-TSS (FBgn0011882) 30 FBgn0011881 FBgn0011881 FBtr0087713 tRNA:I:49Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_6997 chr3L 3472307 3472372 + 33 NA promoter-TSS (FBgn0052267) protein_coding-promoter-TSS (FBgn0052267) -108 FBgn0259224 FBgn0259224 FBtr0299777 CG42324 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1081 chr2L 8492640 8492705 + 33 NA TTS (FBgn0032048) protein_coding-TTS (FBgn0032048) 1933 FBgn0263314 FBgn0263314 FBtr0308708 CG43400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8325 chr3L 17060268 17060386 + 33 NA exon (FBgn0260943, exon 14 of 15) protein_coding-exon (FBgn0260943, exon 14 of 15) 11614 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11230 chr3R 17486734 17486801 + 32 NA promoter-TSS (FBgn0011766) protein_coding-promoter-TSS (FBgn0011766) 1913 FBgn0038893 FBgn0038893 FBtr0084116 CG6353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13214 chrU 2416727 2416973 + 32 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13568 chrX 5931437 5931519 + 32 NA promoter-TSS (FBgn0029833) protein_coding-promoter-TSS (FBgn0029833) 355 FBgn0003302 FBgn0003302 FBtr0070889 rux protein_coding Nup98-S2-pascual-garcia2017_R1_peak_905 chr2L 6649373 6649427 + 32 NA promoter-TSS (FBgn0031842) protein_coding-promoter-TSS (FBgn0031842) 12 FBgn0031842 FBgn0031842 FBtr0303224 Tango1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13497 chrX 2867757 2867812 + 32 NA promoter-TSS (FBgn0003285) protein_coding-promoter-TSS (FBgn0003285) 83 FBgn0003285 FBgn0003285 FBtr0070562 rst protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5212 chr2R 11709925 11709993 + 32 NA Intergenic Intergenic -1359 FBgn0053465 FBgn0053465 FBtr0301048 CG33465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10180 chr3R 10141687 10141788 + 32 NA promoter-TSS (FBgn0011474) protein_coding-promoter-TSS (FBgn0011474) -294 FBgn0011474 FBgn0011474 FBtr0309996 pr-set7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5991 chr2R 18574279 18574376 + 32 NA exon (FBgn0020257, exon 1 of 1) protein_coding-exon (FBgn0020257, exon 1 of 1) 2151 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12516 chr3R 26198424 26198497 + 32 NA Intergenic Intergenic 14881 FBgn0015222 FBgn0015222 FBtr0332170 Fer1HCH protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9121 chr3R 1887283 1887430 + 32 NA Intergenic Intergenic -4097 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3833 chr2L 22868270 22868340 + 32 NA Intergenic Intergenic -6229 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13726 chrX 13715131 13715191 + 32 NA intron (FBgn0030529, intron 1 of 3) protein_coding-intron (FBgn0030529, intron 1 of 3) -1698 FBgn0027537 FBgn0027537 FBtr0331714 CG11092 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10831 chr3R 14592085 14592139 + 32 NA intron (FBgn0038652, intron 3 of 9) protein_coding-intron (FBgn0038652, intron 4 of 10) -7517 FBgn0038651 FBgn0038651 FBtr0305051 CG14299 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9498 chr3R 4494359 4494414 + 32 NA promoter-TSS (FBgn0037607) protein_coding-promoter-TSS (FBgn0037607) 41 FBgn0012025 FBgn0012025 FBtr0081885 tRNA:Y1:85Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_1147 chr2L 8650610 8650668 + 32 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -22513 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13745 chrX 14734078 14734145 + 32 NA promoter-TSS (FBgn0052590) protein_coding-promoter-TSS (FBgn0052590) 704 FBgn0264078 FBgn0264078 FBtr0300435 Flo-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5410 chr2R 13614344 13614409 + 32 NA promoter-TSS (FBgn0034266) protein_coding-promoter-TSS (FBgn0034266) -67 FBgn0034266 FBgn0034266 FBtr0086861 CG4975 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7513 chr3L 9848357 9848456 + 32 NA promoter-TSS (FBgn0004390) protein_coding-promoter-TSS (FBgn0004390) -21 FBgn0004390 FBgn0004390 FBtr0330168 Gap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3022 chr2L 19362907 19362986 + 32 NA exon (FBgn0024245, exon 1 of 4) protein_coding-exon (FBgn0024245, exon 1 of 4) 278 FBgn0024245 FBgn0024245 FBtr0081224 dnt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6386 chr2RHet 609756 609812 + 32 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11694 chr3R 22517921 22518020 + 32 NA TTS (FBgn0039448) protein_coding-TTS (FBgn0039448) 1275 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11794 chr3R 23114214 23114283 + 32 NA promoter-TSS (FBgn0015737) protein_coding-promoter-TSS (FBgn0015737) -31 FBgn0039509 FBgn0039509 FBtr0085173 bigmax protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12437 chr3R 25551423 25551577 + 32 NA promoter-TSS (FBgn0039688) protein_coding-promoter-TSS (FBgn0039688) -52 FBgn0039688 FBgn0039688 FBtr0085460 Kul protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13640 chrX 9980443 9980598 + 32 NA promoter-TSS (FBgn0083940) protein_coding-promoter-TSS (FBgn0083940) -46 FBgn0083940 FBgn0083940 FBtr0110782 CG34104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13533 chrX 4521348 4521407 + 32 NA TTS (FBgn0025387) protein_coding-TTS (FBgn0025387) 3592 FBgn0025387 FBgn0025387 FBtr0070696 CG12184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12544 chr3R 26540427 26540513 + 32 NA Intergenic Intergenic -8655 FBgn0051010 FBgn0051010 FBtr0085725 CG31010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3857 chr2L 22931095 22931149 + 32 NA Intergenic Intergenic -12562 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6046 chr2R 18962262 18962364 + 32 NA promoter-TSS (FBgn0034816) protein_coding-promoter-TSS (FBgn0034816) -39 FBgn0034816 FBgn0034816 FBtr0071963 CG3085 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12981 chr4 938243 938309 + 32 NA exon (FBgn0023213, exon 11 of 16) protein_coding-exon (FBgn0023213, exon 11 of 16) 10460 FBgn0263093 FBgn0263093 FBtr0307112 CR43361 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_13545 chrX 5418473 5418756 + 32 NA promoter-TSS (FBgn0086667) snoRNA-promoter-TSS (FBgn0086667) -116 FBgn0086667 FBgn0086667 FBtr0091788 snoRNA:Psi28S-3342 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_13389 chrUextra 22840284 22840338 + 32 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4104 chr2R 2958238 2958407 + 32 NA promoter-TSS (FBgn0050299) tRNA-promoter-TSS (FBgn0050299) 16 FBgn0050299 FBgn0050299 FBtr0089058 tRNA:CR30299 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12768 chr3R 27584075 27584143 + 32 NA promoter-TSS (FBgn0017448) protein_coding-promoter-TSS (FBgn0017448) -309 FBgn0017448 FBgn0017448 FBtr0303376 CG2187 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4363 chr2R 4907894 4907957 + 32 NA exon (FBgn0033365, exon 6 of 9) protein_coding-exon (FBgn0033365, exon 6 of 9) 2565 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13081 chrU 155640 155722 + 32 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3617 chr2L 22090782 22090866 + 32 NA Intergenic Intergenic 11152 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9200 chr3R 2485795 2485873 + 32 NA promoter-TSS (FBgn0024912) protein_coding-promoter-TSS (FBgn0024912) -12 FBgn0024912 FBgn0024912 FBtr0081697 agt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13266 chrU 6110522 6110576 + 32 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13478 chrX 1847083 1847228 + 32 NA intron (FBgn0264562, intron 2 of 11) protein_coding-intron (FBgn0264562, intron 2 of 11) 11182 FBgn0264562 FBgn0264562 FBtr0333339 Hr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_435 chr2L 2804698 2805019 + 32 NA promoter-TSS (FBgn0031461) protein_coding-promoter-TSS (FBgn0031461) -3463 FBgn0031461 FBgn0031461 FBtr0077721 daw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3911 chr2R 248930 248990 + 32 NA intron (FBgn0260798, intron 11 of 15) protein_coding-intron (FBgn0260798, intron 10 of 14) 109598 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2475 chr2L 16487732 16487837 + 32 NA promoter-TSS (FBgn0032585) protein_coding-promoter-TSS (FBgn0032585) -364 FBgn0032585 FBgn0032585 FBtr0080865 CG4580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10979 chr3R 15628377 15628510 + 32 NA promoter-TSS (FBgn0051471) tRNA-promoter-TSS (FBgn0051471) 31 FBgn0051471 FBgn0051471 FBtr0083794 tRNA:CR31471 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13031 chr4 1234432 1234497 + 32 NA promoter-TSS (FBgn0027101) protein_coding-promoter-TSS (FBgn0027101) -25 FBgn0027101 FBgn0027101 FBtr0100404 Dyrk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11916 chr3R 23557983 23558044 + 32 NA Intergenic Intergenic -4249 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13586 chrX 7180226 7180363 + 32 NA promoter-TSS (FBgn0029942) protein_coding-promoter-TSS (FBgn0029942) -97 FBgn0029942 FBgn0029942 FBtr0071047 CG2059 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5586 chr2R 15165612 15165747 + 32 NA exon (FBgn0003254, exon 2 of 2) protein_coding-exon (FBgn0003254, exon 2 of 2) 2448 FBgn0003254 FBgn0003254 FBtr0330058 rib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5947 chr2R 18131299 18131367 + 32 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -15609 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6647 chr2RHet 2316851 2316908 + 32 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6732 chr3L 612192 612703 + 32 NA Intergenic Intergenic 4199 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1940 chr2L 14329011 14329094 + 32 NA TTS (FBgn0261563) protein_coding-TTS (FBgn0261563) 623 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7473 chr3L 9034262 9034336 + 32 NA promoter-TSS (FBgn0028789) protein_coding-promoter-TSS (FBgn0028789) -630 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12139 chr3R 24398197 24398255 + 32 NA Intergenic Intergenic 12608 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2473 chr2L 16485626 16485918 + 32 NA promoter-TSS (FBgn0005677) protein_coding-promoter-TSS (FBgn0005677) 212 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2800 chr2L 17956700 17956754 + 32 NA Intergenic Intergenic -6687 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6478 chr2RHet 1454356 1454436 + 32 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12857 chr3RHet 1128795 1128850 + 32 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1511 chr2L 11210527 11210624 + 32 NA promoter-TSS (FBgn0264442) protein_coding-promoter-TSS (FBgn0264442) -4483 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10774 chr3R 14238843 14238909 + 32 NA promoter-TSS (FBgn0051122) protein_coding-promoter-TSS (FBgn0051122) -1523 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2067 chr2L 14733264 14733509 + 32 NA Intergenic Intergenic -2457 FBgn0051835 FBgn0051835 FBtr0080667 CG31835 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9221 chr3R 2585357 2585446 + 32 NA promoter-TSS (FBgn0000166) protein_coding-promoter-TSS (FBgn0000166) -202 FBgn0000166 FBgn0000166 FBtr0081668 bcd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10923 chr3R 15342237 15342299 + 32 NA intron (FBgn0260003, intron 1 of 14) protein_coding-intron (FBgn0260003, intron 22 of 34) -25431 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7261 chr3L 6982623 6982708 + 32 NA Intergenic Intergenic -1057 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1910 chr2L 14288048 14288112 + 31 NA intron (FBgn0261563, intron 3 of 12) protein_coding-intron (FBgn0261563, intron 3 of 15) -3121 FBgn0263648 FBgn0263648 FBtr0310012 CR43639 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11766 chr3R 22877789 22877843 + 31 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) 2874 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11568 chr3R 22014504 22014633 + 31 NA promoter-TSS (FBgn0039417) protein_coding-promoter-TSS (FBgn0039417) -42 FBgn0039417 FBgn0039417 FBtr0307342 CG6073 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11386 chr3R 19555873 19556171 + 31 NA exon (FBgn0065098, exon 1 of 1) ncRNA-exon (FBgn0065098, exon 1 of 1) 129 FBgn0065098 FBgn0065098 FBtr0091662 RNaseMRP:RNA ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10617 chr3R 13247613 13247842 + 31 NA exon (FBgn0038509, exon 1 of 1) protein_coding-exon (FBgn0038509, exon 1 of 1) 197 FBgn0038509 FBgn0038509 FBtr0083446 CG14332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9039 chr3R 1193322 1193456 + 31 NA intron (FBgn0037315, intron 1 of 3) protein_coding-intron (FBgn0037315, intron 1 of 3) -1873 FBgn0085306 FBgn0085306 FBtr0332160 CG34277 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_357 chr2L 2009521 2009575 + 31 NA promoter-TSS (FBgn0051944) tRNA-promoter-TSS (FBgn0051944) 10 FBgn0051944 FBgn0051944 FBtr0077819 tRNA:CR31944 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6293 chr2RHet 8827 8883 + 31 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11180 chr3R 17010603 17010697 + 31 NA intron (FBgn0264357, intron 1 of 8) protein_coding-intron (FBgn0264357, intron 6 of 12) -16723 FBgn0260004 FBgn0260004 FBtr0084027 Snmp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12434 chr3R 25542813 25542929 + 31 NA promoter-TSS (FBgn0039685) protein_coding-promoter-TSS (FBgn0039685) -253 FBgn0039685 FBgn0039685 FBtr0085462 Obp99b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13547 chrX 5488040 5488173 + 31 NA promoter-TSS (FBgn0263511) protein_coding-promoter-TSS (FBgn0263511) -200 FBgn0263511 FBgn0263511 FBtr0070781 Vsx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8290 chr3L 16738879 16739096 + 31 NA Intergenic Intergenic -9602 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3733 chr2L 22491933 22492299 + 31 NA Intergenic Intergenic 19634 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13512 chrX 3571639 3571870 + 31 NA intron (FBgn0023215, intron 1 of 8) protein_coding-intron (FBgn0023215, intron 1 of 8) -6219 FBgn0023216 FBgn0023216 FBtr0307279 Parg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7106 chr3L 5758603 5758659 + 31 NA promoter-TSS (FBgn0035631) protein_coding-promoter-TSS (FBgn0035631) 60 FBgn0035630 FBgn0035630 FBtr0077121 CG10576 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6342 chr2RHet 443116 443188 + 31 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9923 chr3R 8143723 8143788 + 31 NA Intergenic Intergenic 4601 FBgn0051432 FBgn0051432 FBtr0082616 tRNA:CR31432 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1783 chr2L 13309807 13309874 + 31 NA exon (FBgn0264308, exon 2 of 6) protein_coding-exon (FBgn0264308, exon 2 of 6) -3085 FBgn0264301 FBgn0264301 FBtr0331506 CG43779 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11636 chr3R 22286111 22286456 + 31 NA promoter-TSS (FBgn0039430) protein_coding-promoter-TSS (FBgn0039430) 2208 FBgn0039429 FBgn0039429 FBtr0085014 CG14238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1774 chr2L 13182546 13182641 + 31 NA promoter-TSS (FBgn0032478) protein_coding-promoter-TSS (FBgn0032478) 3 FBgn0051849 FBgn0051849 FBtr0080490 CG31849 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4043 chr2R 2066078 2066199 + 31 NA promoter-TSS (FBgn0011955) tRNA-promoter-TSS (FBgn0011955) 23 FBgn0011955 FBgn0011955 FBtr0086006 tRNA:R2:42Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_193 chr2L 1256257 1256485 + 31 NA promoter-TSS (FBgn0041097) protein_coding-promoter-TSS (FBgn0041097) -55 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3525 chr2L 21948096 21948156 + 31 NA Intergenic Intergenic 31765 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11114 chr3R 16383415 16383508 + 31 NA promoter-TSS (FBgn0043457) protein_coding-promoter-TSS (FBgn0043457) -58 FBgn0067783 FBgn0067783 FBtr0089481 att-ORFA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4175 chr2R 3442499 3442553 + 31 NA intron (FBgn0033192, intron 2 of 13) protein_coding-intron (FBgn0033192, intron 2 of 13) 9359 FBgn0033192 FBgn0033192 FBtr0088909 Corin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8710 chr3L 22851318 22851377 + 31 NA Intergenic Intergenic -2188 FBgn0052459 FBgn0052459 FBtr0078578 CG32459 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6398 chr2RHet 704338 704426 + 31 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12590 chr3R 26755256 26755373 + 31 NA exon (FBgn0020912, exon 5 of 5) protein_coding-exon (FBgn0020912, exon 5 of 5) 6915 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9499 chr3R 4494829 4494920 + 31 NA promoter-TSS (FBgn0037607) protein_coding-promoter-TSS (FBgn0037607) 22 FBgn0012024 FBgn0012024 FBtr0081884 tRNA:Y1:85Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_9835 chr3R 7445613 7445681 + 31 NA promoter-TSS (FBgn0051363) protein_coding-promoter-TSS (FBgn0051363) -167 FBgn0037920 FBgn0037920 FBtr0299566 CG14710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_583 chr2L 4104763 4104843 + 31 NA intron (FBgn0000547, intron 7 of 8) protein_coding-intron (FBgn0000547, intron 7 of 8) -15560 FBgn0020376 FBgn0020376 FBtr0077466 Sr-CIII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12446 chr3R 25625048 25625110 + 31 NA promoter-TSS (FBgn0019972) protein_coding-promoter-TSS (FBgn0019972) -24 FBgn0039696 FBgn0039696 FBtr0085537 CG7837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4170 chr2R 3418418 3418500 + 31 NA intron (FBgn0033188, intron 1 of 2) protein_coding-intron (FBgn0033188, intron 1 of 2) -1693 FBgn0033188 FBgn0033188 FBtr0088958 CG1600 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4559 chr2R 6271677 6271731 + 31 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) -4090 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4910 chr2R 9149899 9149954 + 31 NA promoter-TSS (FBgn0259219) protein_coding-promoter-TSS (FBgn0259219) -64 FBgn0259219 FBgn0259219 FBtr0299738 CG42319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5980 chr2R 18441667 18441780 + 31 NA intron (FBgn0003175, intron 3 of 14) protein_coding-intron (FBgn0003175, intron 3 of 13) 4124 FBgn0034736 FBgn0034736 FBtr0071835 CG6018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3119 chr2L 19887614 19887716 + 31 NA intron (FBgn0263873, intron 3 of 15) protein_coding-intron (FBgn0263873, intron 4 of 15) 4885 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12433 chr3R 25541859 25541945 + 31 NA promoter-TSS (FBgn0250832) protein_coding-promoter-TSS (FBgn0250832) 716 FBgn0039685 FBgn0039685 FBtr0085462 Obp99b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3100 chr2L 19810187 19810245 + 31 NA promoter-TSS (FBgn0003931) snRNA-promoter-TSS (FBgn0003931) -518 FBgn0003931 FBgn0003931 FBtr0081292 snRNA:U4:38AB snRNA Nup98-S2-pascual-garcia2017_R1_peak_10969 chr3R 15584092 15584146 + 31 NA intron (FBgn0024963, intron 4 of 12) protein_coding-intron (FBgn0024963, intron 4 of 11) -13920 FBgn0263499 FBgn0263499 FBtr0309521 CR43488 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_622 chr2L 4325398 4325496 + 31 NA intron (FBgn0028482, intron 1 of 5) protein_coding-intron (FBgn0028482, intron 1 of 5) 874 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2033 chr2L 14598797 14598938 + 31 NA promoter-TSS (FBgn0028912) tRNA-promoter-TSS (FBgn0028912) 8 FBgn0028912 FBgn0028912 FBtr0080646 tRNA:P:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_2034 chr2L 14599435 14599706 + 31 NA promoter-TSS (FBgn0028910) tRNA-promoter-TSS (FBgn0028910) -103 FBgn0028911 FBgn0028911 FBtr0080660 tRNA:P:35Bb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4936 chr2R 9291313 9291385 + 31 NA Intergenic Intergenic -3162 FBgn0033835 FBgn0033835 FBtr0087655 IM10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13780 chrX 17053935 17054108 + 31 NA promoter-TSS (FBgn0000163) protein_coding-promoter-TSS (FBgn0000163) -682 FBgn0028974 FBgn0028974 FBtr0074404 xmas-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11308 chr3R 18167044 18167100 + 31 NA TTS (FBgn0038945) protein_coding-TTS (FBgn0038945) 864 FBgn0038945 FBgn0038945 FBtr0084240 CG5386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2549 chr2L 16942483 16942538 + 31 NA Intergenic Intergenic 2864 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13841 chrX 21195045 21195108 + 31 NA promoter-TSS (FBgn0031174) protein_coding-promoter-TSS (FBgn0031174) -16 FBgn0029067 FBgn0029067 FBtr0077226 Dd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2314 chr2L 15619096 15619151 + 31 NA Intergenic Intergenic 2121 FBgn0028947 FBgn0028947 FBtr0080753 CG11865 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10901 chr3R 15163569 15163623 + 31 NA Intergenic Intergenic 8138 FBgn0262903 FBgn0262903 FBtr0306320 CR43258 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8767 chr3L 23696576 23696642 + 31 NA Intergenic Intergenic -11782 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8809 chr3L 24003952 24004144 + 31 NA exon (FBgn0058053, exon 2 of 2) protein_coding-exon (FBgn0058053, exon 2 of 2) 415 FBgn0058053 FBgn0058053 FBtr0111154 CG40053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7479 chr3L 9059492 9059549 + 31 NA promoter-TSS (FBgn0000116) protein_coding-promoter-TSS (FBgn0000116) 6311 FBgn0035959 FBgn0035959 FBtr0331549 CG4911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9609 chr3R 5503585 5503655 + 31 NA promoter-TSS (FBgn0037728) protein_coding-promoter-TSS (FBgn0037728) -29 FBgn0037728 FBgn0037728 FBtr0308353 CG16817 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3074 chr2L 19695187 19695443 + 31 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 5653 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4429 chr2R 5390284 5390368 + 31 NA promoter-TSS (FBgn0259246) protein_coding-promoter-TSS (FBgn0259246) -967 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2514 chr2L 16738361 16738451 + 31 NA promoter-TSS (FBgn0032598) protein_coding-promoter-TSS (FBgn0032598) -34 FBgn0015391 FBgn0015391 FBtr0080935 glu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7586 chr3L 10692811 10692871 + 31 NA Intergenic Intergenic -2864 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12182 chr3R 24570144 24570201 + 31 NA promoter-TSS (FBgn0039595) protein_coding-promoter-TSS (FBgn0039595) 313 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5805 chr2R 17070176 17070407 + 31 NA promoter-TSS (FBgn0011872) tRNA-promoter-TSS (FBgn0011872) -37 FBgn0050209 FBgn0050209 FBtr0071626 tRNA:CR30209 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10462 chr3R 12229555 12229741 + 31 NA promoter-TSS (FBgn0003513) protein_coding-promoter-TSS (FBgn0003513) -236 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13755 chrX 15513581 15513659 + 31 NA intron (FBgn0003463, intron 3 of 7) protein_coding-intron (FBgn0003463, intron 1 of 5) 13847 FBgn0003463 FBgn0003463 FBtr0331761 sog protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10205 chr3R 10369776 10369830 + 31 NA intron (FBgn0038237, intron 2 of 13) protein_coding-intron (FBgn0038237, intron 2 of 13) 13891 FBgn0038237 FBgn0038237 FBtr0330048 Pde6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4474 chr2R 5696223 5696281 + 31 NA Intergenic Intergenic -1882 FBgn0027589 FBgn0027589 FBtr0088495 CG1688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_205 chr2L 1310086 1310224 + 31 NA Intergenic Intergenic -19006 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1322 chr2L 9195529 9195609 + 31 NA intron (FBgn0041092, intron 2 of 12) protein_coding-intron (FBgn0041092, intron 3 of 14) 28791 FBgn0041092 FBgn0041092 FBtr0303872 tai protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5265 chr2R 12159462 12159527 + 31 NA promoter-TSS (FBgn0053017) protein_coding-promoter-TSS (FBgn0053017) -11 FBgn0001308 FBgn0001308 FBtr0087184 Khc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9041 chr3R 1197481 1197540 + 31 NA promoter-TSS (FBgn0003275) protein_coding-promoter-TSS (FBgn0003275) -7 FBgn0003275 FBgn0003275 FBtr0078787 RpII18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13020 chr4 1068087 1068141 + 31 NA exon (FBgn0264607, exon 8 of 14) protein_coding-exon (FBgn0264607, exon 8 of 14) 6215 FBgn0264607 FBgn0264607 FBtr0300379 CaMKII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4963 chr2R 9560524 9560578 + 31 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 5310 FBgn0033864 FBgn0033864 FBtr0087627 CG18368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7509 chr3L 9691364 9691420 + 31 NA promoter-TSS (FBgn0015321) protein_coding-promoter-TSS (FBgn0015321) -44 FBgn0015321 FBgn0015321 FBtr0076395 UbcD4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6155 chr2R 20031945 20032075 + 31 NA intron (FBgn0019643, intron 1 of 3) protein_coding-intron (FBgn0019643, intron 1 of 3) -2497 FBgn0019643 FBgn0019643 FBtr0072255 Dat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5108 chr2R 10740127 10740187 + 31 NA promoter-TSS (FBgn0028434) protein_coding-promoter-TSS (FBgn0028434) -2 FBgn0027783 FBgn0027783 FBtr0087461 SMC2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_558 chr2L 3825472 3825629 + 30 NA promoter-TSS (FBgn0003430) protein_coding-promoter-TSS (FBgn0003430) -130 FBgn0003430 FBgn0003430 FBtr0077499 slp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_235 chr2L 1391421 1391491 + 30 NA exon (FBgn0002543, exon 8 of 14) protein_coding-exon (FBgn0002543, exon 8 of 14) 23367 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5519 chr2R 14548079 14548137 + 30 NA promoter-TSS (FBgn0034372) protein_coding-promoter-TSS (FBgn0034372) 169 FBgn0259202 FBgn0259202 FBtr0299689 CG42306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_230 chr2L 1386545 1386642 + 30 NA intron (FBgn0002543, intron 12 of 13) protein_coding-intron (FBgn0002543, intron 12 of 13) 18504 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11161 chr3R 16768244 16768301 + 30 NA intron (FBgn0051191, intron 1 of 5) protein_coding-intron (FBgn0051191, intron 1 of 5) -6164 FBgn0002921 FBgn0002921 FBtr0089516 Atpalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6184 chr2R 20225908 20225964 + 30 NA Intergenic Intergenic -4107 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13103 chrU 222789 222843 + 30 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7630 chr3L 10973098 10973231 + 30 NA Intergenic Intergenic 7416 FBgn0036112 FBgn0036112 FBtr0076194 CG14147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13509 chrX 3301944 3302053 + 30 NA intron (FBgn0029657, intron 3 of 4) protein_coding-intron (FBgn0029657, intron 2 of 3) 19558 FBgn0052493 FBgn0052493 FBtr0070533 tRNA:CR32493 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5357 chr2R 13101588 13101668 + 30 NA Intergenic Intergenic 8915 FBgn0262882 FBgn0262882 FBtr0306290 CG43237 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13541 chrX 5244373 5244436 + 30 NA intron (FBgn0029761, intron 2 of 14) protein_coding-intron (FBgn0029761, intron 2 of 10) 10135 FBgn0029761 FBgn0029761 FBtr0301952 SK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6937 chr3L 2636286 2636347 + 30 NA promoter-TSS (FBgn0035357) protein_coding-promoter-TSS (FBgn0035357) 4601 FBgn0035357 FBgn0035357 FBtr0072936 MEP-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10149 chr3R 9825087 9825153 + 30 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 26561 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12811 chr3R 27831501 27831565 + 30 NA Intergenic Intergenic 18962 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6176 chr2R 20193253 20193343 + 30 NA promoter-TSS (FBgn0003888) protein_coding-promoter-TSS (FBgn0003888) -107 FBgn0003888 FBgn0003888 FBtr0072270 betaTub60D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11588 chr3R 22124745 22124804 + 30 NA Intergenic Intergenic 26223 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2015 chr2L 14546016 14546079 + 30 NA Intergenic Intergenic 3028 FBgn0250844 FBgn0250844 FBtr0080662 CG4218 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12687 chr3R 27171282 27171356 + 30 NA intron (FBgn0085376, intron 2 of 7) protein_coding-intron (FBgn0085376, intron 2 of 16) -26830 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6932 chr3L 2523418 2523474 + 30 NA intron (FBgn0010905, intron 4 of 16) protein_coding-intron (FBgn0010905, intron 4 of 15) 3527 FBgn0260480 FBgn0260480 FBtr0072962 CG32295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12967 chr4 784359 784427 + 30 NA exon (FBgn0005666, exon 33 of 41) protein_coding-exon (FBgn0005666, exon 33 of 41) 23869 FBgn0039923 FBgn0039923 FBtr0089254 MED26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13463 chrX 1541398 1541452 + 30 NA exon (FBgn0000210, exon 8 of 8) protein_coding-exon (FBgn0000210, exon 8 of 8) -4929 FBgn0029584 FBgn0029584 FBtr0305287 CG11509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11489 chr3R 21707114 21707257 + 30 NA promoter-TSS (FBgn0039381) protein_coding-promoter-TSS (FBgn0039381) -23 FBgn0027865 FBgn0027865 FBtr0330163 Tsp96F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13615 chrX 8699891 8700121 + 30 NA promoter-TSS (FBgn0026411) protein_coding-promoter-TSS (FBgn0026411) -20620 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8707 chr3L 22782002 22782112 + 30 NA TTS (FBgn0027339) protein_coding-TTS (FBgn0027339) 518 FBgn0037191 FBgn0037191 FBtr0078534 CG14448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13697 chrX 12932151 12932205 + 30 NA intron (FBgn0261388, intron 1 of 14) protein_coding-intron (FBgn0261388, intron 1 of 14) 2156 FBgn0261388 FBgn0261388 FBtr0302270 CG42629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1229 chr2L 8845610 8845753 + 30 NA Intergenic Intergenic -17095 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6096 chr2R 19375509 19375607 + 30 NA intron (FBgn0264339, intron 13 of 13) protein_coding-intron (FBgn0264339, intron 13 of 13) -10558 FBgn0264337 FBgn0264337 FBtr0331988 CR43793 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7462 chr3L 8996673 8996727 + 30 NA Intergenic Intergenic -1596 FBgn0035954 FBgn0035954 FBtr0076521 Doc3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2462 chr2L 16407338 16407393 + 30 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) 10519 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5180 chr2R 11374032 11374086 + 30 NA exon (FBgn0034022, exon 3 of 4) protein_coding-exon (FBgn0034022, exon 3 of 4) -3721 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8524 chr3L 18724341 18724430 + 30 NA Intergenic Intergenic 7478 FBgn0264717 FBgn0264717 FBtr0334051 CR43985 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3112 chr2L 19873478 19873716 + 30 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 17496 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13134 chrU 596230 596286 + 30 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9253 chr3R 2718878 2719095 + 30 NA Intergenic Intergenic 11418 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10178 chr3R 10134300 10134357 + 30 NA promoter-TSS (FBgn0004855) protein_coding-promoter-TSS (FBgn0004855) -19 FBgn0003567 FBgn0003567 FBtr0082946 su(Hw) protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5157 chr2R 11124392 11124446 + 30 NA intron (FBgn0259878, intron 2 of 8) protein_coding-intron (FBgn0259878, intron 2 of 8) 4665 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13649 chrX 10708298 10708391 + 30 NA promoter-TSS (FBgn0262735) protein_coding-promoter-TSS (FBgn0262735) -218 FBgn0262735 FBgn0262735 FBtr0073419 Imp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9745 chr3R 6715124 6715217 + 30 NA promoter-TSS (FBgn0042094) protein_coding-promoter-TSS (FBgn0042094) 140 FBgn0042094 FBgn0042094 FBtr0082330 Adk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7976 chr3L 13855665 13855784 + 30 NA intron (FBgn0036381, intron 2 of 3) protein_coding-intron (FBgn0036381, intron 2 of 3) 4281 FBgn0036381 FBgn0036381 FBtr0075801 CG8745 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6123 chr2R 19600937 19601031 + 30 NA promoter-TSS (FBgn0034897) protein_coding-promoter-TSS (FBgn0034897) -441 FBgn0034897 FBgn0034897 FBtr0113114 Sesn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13531 chrX 4320790 4321104 + 30 NA promoter-TSS (FBgn0000179) protein_coding-promoter-TSS (FBgn0000179) 14058 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2689 chr2L 17531122 17531291 + 30 NA exon (FBgn0032649, exon 3 of 3) protein_coding-exon (FBgn0032649, exon 3 of 3) 1028 FBgn0032649 FBgn0032649 FBtr0080991 CG15145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5949 chr2R 18163455 18163636 + 30 NA intron (FBgn0020307, intron 1 of 4) protein_coding-intron (FBgn0020307, intron 2 of 5) 5120 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11014 chr3R 15834210 15834305 + 30 NA promoter-TSS (FBgn0038760) protein_coding-promoter-TSS (FBgn0038760) -13 FBgn0038755 FBgn0038755 FBtr0083846 Hs6st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8708 chr3L 22828470 22828753 + 30 NA promoter-TSS (FBgn0027339) protein_coding-promoter-TSS (FBgn0027339) -1557 FBgn0037195 FBgn0037195 FBtr0078546 CG11226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11541 chr3R 21898243 21898321 + 30 NA Intergenic Intergenic -9549 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1827 chr2L 13689391 13689451 + 30 NA exon (FBgn0051814, exon 8 of 13) protein_coding-exon (FBgn0051814, exon 8 of 13) -18794 FBgn0028848 FBgn0028848 FBtr0310273 CG7311 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1201 chr2L 8798172 8798249 + 30 NA Intergenic Intergenic -11190 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12827 chr3RHet 202312 202366 + 30 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9800 chr3R 7134364 7134428 + 30 NA Intergenic Intergenic -3066 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5340 chr2R 12871578 12871635 + 30 NA intron (FBgn0004580, intron 1 of 10) protein_coding-intron (FBgn0004580, intron 1 of 10) 10141 FBgn0004580 FBgn0004580 FBtr0087056 Cbp53E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13479 chrX 1858126 1858181 + 30 NA intron (FBgn0264562, intron 3 of 11) protein_coding-intron (FBgn0264562, intron 3 of 11) 22180 FBgn0264562 FBgn0264562 FBtr0333339 Hr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9175 chr3R 2302295 2302378 + 30 NA Intergenic Intergenic 8202 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_921 chr2L 6787806 6787866 + 30 NA promoter-TSS (FBgn0015776) protein_coding-promoter-TSS (FBgn0015776) -975 FBgn0015776 FBgn0015776 FBtr0332370 nrv1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13806 chrX 18251834 18251960 + 30 NA Intergenic Intergenic -1019 FBgn0030914 FBgn0030914 FBtr0074553 CG6106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13647 chrX 10629817 10629999 + 30 NA intron (FBgn0052676, intron 1 of 3) protein_coding-intron (FBgn0052676, intron 1 of 3) -8627 FBgn0003204 FBgn0003204 FBtr0071496 ras protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13592 chrX 7201480 7201844 + 30 NA promoter-TSS (FBgn0024250) protein_coding-promoter-TSS (FBgn0024250) -312 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9974 chr3R 8605901 8605957 + 30 NA Intergenic Intergenic -2055 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3834 chr2L 22890845 22891454 + 30 NA Intergenic Intergenic 16615 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2433 chr2L 16189273 16189506 + 30 NA exon (FBgn0001991, exon 32 of 32) protein_coding-exon (FBgn0001991, exon 32 of 32) -10201 FBgn0264350 FBgn0264350 FBtr0332026 CR43806 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8571 chr3L 19672181 19672264 + 30 NA Intergenic Intergenic 8231 FBgn0036900 FBgn0036900 FBtr0331859 CG8765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5366 chr2R 13143080 13143134 + 30 NA promoter-TSS (FBgn0263708) ncRNA-promoter-TSS (FBgn0263708) 361 FBgn0262961 FBgn0262961 FBtr0306715 CG43272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5635 chr2R 15615456 15615786 + 30 NA promoter-TSS (FBgn0050220) tRNA-promoter-TSS (FBgn0050220) -64 FBgn0011848 FBgn0011848 FBtr0086446 tRNA:E4:56Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_1894 chr2L 14154044 14154098 + 30 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 9151 FBgn0263037 FBgn0263037 FBtr0306928 CG43332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4216 chr2R 3911878 3912256 + 30 NA Intergenic Intergenic 5366 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_120 chr2L 936347 936413 + 30 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 13587 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3925 chr2R 543415 543584 + 30 NA Intergenic Intergenic -15863 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13355 chrUextra 9215656 9215710 + 30 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9489 chr3R 4459647 4459748 + 30 NA TTS (FBgn0026399) protein_coding-TTS (FBgn0026399) 1903 FBgn0026399 FBgn0026399 FBtr0310300 Or85e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1804 chr2L 13445704 13445782 + 30 NA promoter-TSS (FBgn0032524) protein_coding-promoter-TSS (FBgn0032524) -92 FBgn0032524 FBgn0032524 FBtr0080519 CG9267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5775 chr2R 16791061 16791296 + 30 NA promoter-TSS (FBgn0015524) protein_coding-promoter-TSS (FBgn0015524) -278 FBgn0015524 FBgn0015524 FBtr0110772 otp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8750 chr3L 23583640 23583704 + 30 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 34647 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12880 chr3RHet 1779186 1779240 + 30 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2049 chr2L 14636632 14636839 + 30 NA intron (FBgn0003016, intron 1 of 9) protein_coding-intron (FBgn0003016, intron 2 of 10) 20466 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6978 chr3L 3096323 3096638 + 30 NA promoter-TSS (FBgn0052285) tRNA-promoter-TSS (FBgn0052285) 111 FBgn0052287 FBgn0052287 FBtr0073020 tRNA:CR32287 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6124 chr2R 19601259 19601504 + 30 NA promoter-TSS (FBgn0034897) protein_coding-promoter-TSS (FBgn0034897) -44 FBgn0034897 FBgn0034897 FBtr0113114 Sesn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6760 chr3L 712171 712250 + 30 NA promoter-TSS (FBgn0035159) protein_coding-promoter-TSS (FBgn0035159) -360 FBgn0035159 FBgn0035159 FBtr0072602 CG13896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1389 chr2L 9861371 9861427 + 30 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 13110 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5257 chr2R 12107529 12107633 + 30 NA promoter-TSS (FBgn0050240) tRNA-promoter-TSS (FBgn0050240) 24 FBgn0050240 FBgn0050240 FBtr0087129 tRNA:CR30240 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12269 chr3R 24978987 24979053 + 30 NA promoter-TSS (FBgn0028692) protein_coding-promoter-TSS (FBgn0028692) -51 FBgn0041186 FBgn0041186 FBtr0085409 Slbp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3901 chr2R 140449 140545 + 30 NA Intergenic Intergenic -10053 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13366 chrUextra 13855992 13856060 + 30 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11040 chr3R 15960276 15960372 + 30 NA Intergenic Intergenic 5319 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5000 chr2R 9733805 9733909 + 30 NA promoter-TSS (FBgn0033876) protein_coding-promoter-TSS (FBgn0033876) -41 FBgn0050484 FBgn0050484 FBtr0331382 CG30484 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13535 chrX 4833115 4833177 + 30 NA promoter-TSS (FBgn0004368) protein_coding-promoter-TSS (FBgn0004368) -19 FBgn0004368 FBgn0004368 FBtr0301794 Ptp4E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9695 chr3R 6353480 6353549 + 30 NA intron (FBgn0001235, intron 9 of 12) protein_coding-intron (FBgn0001235, intron 8 of 11) -14736 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8531 chr3L 18794448 18794686 + 30 NA promoter-TSS (FBgn0001078) protein_coding-promoter-TSS (FBgn0001078) 19208 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_698 chr2L 4811752 4812012 + 30 NA Intergenic Intergenic -1127 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10246 chr3R 10797435 10797489 + 30 NA Intergenic Intergenic -43030 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_647 chr2L 4439082 4439198 + 30 NA TTS (FBgn0262358) protein_coding-TTS (FBgn0262358) 1006 FBgn0031602 FBgn0031602 FBtr0331436 CG15431 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13185 chrU 1922733 1922787 + 30 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6764 chr3L 774712 774782 + 30 NA Intergenic Intergenic 4384 FBgn0052481 FBgn0052481 FBtr0072580 tRNA:CR32481 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4199 chr2R 3793065 3793121 + 29 NA exon (FBgn0050377, exon 4 of 5) protein_coding-exon (FBgn0050377, exon 4 of 5) 10875 FBgn0033232 FBgn0033232 FBtr0088888 CG12159 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10445 chr3R 12107992 12108046 + 29 NA exon (FBgn0250823, exon 2 of 12) protein_coding-exon (FBgn0250823, exon 2 of 12) 9843 FBgn0250823 FBgn0250823 FBtr0100332 gish protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6682 chr2RHet 3012376 3012437 + 29 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5948 chr2R 18158154 18158339 + 29 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -179 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2973 chr2L 19141656 19141710 + 29 NA intron (FBgn0010300, intron 1 of 4) protein_coding-intron (FBgn0010300, intron 1 of 3) -6450 FBgn0086447 FBgn0086447 FBtr0081161 l(2)37Cg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12539 chr3R 26488380 26488439 + 29 NA Intergenic Intergenic 12726 FBgn0085462 FBgn0085462 FBtr0304711 CG34433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2176 chr2L 15149254 15149336 + 29 NA Intergenic Intergenic -16906 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_10666 chr3R 13557958 13558012 + 29 NA exon (FBgn0016650, exon 15 of 17) protein_coding-exon (FBgn0016650, exon 15 of 17) -1337 FBgn0038540 FBgn0038540 FBtr0083511 CG14321 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8023 chr3L 14181494 14181566 + 29 NA exon (FBgn0036414, exon 3 of 9) protein_coding-exon (FBgn0036414, exon 3 of 9) 1218 FBgn0036414 FBgn0036414 FBtr0321258 nan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5765 chr2R 16728275 16728334 + 29 NA Intergenic Intergenic -4735 FBgn0011674 FBgn0011674 FBtr0071562 insc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5923 chr2R 17925780 17925915 + 29 NA intron (FBgn0085399, intron 1 of 8) protein_coding-intron (FBgn0085399, intron 1 of 8) 1089 FBgn0085399 FBgn0085399 FBtr0332252 CG34370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6270 chr2R 20963506 20963611 + 29 NA promoter-TSS (FBgn0050198) tRNA-promoter-TSS (FBgn0050198) 30 FBgn0050198 FBgn0050198 FBtr0072445 tRNA:CR30198 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1453 chr2L 10672882 10672936 + 29 NA Intergenic Intergenic -4461 FBgn0040496 FBgn0040496 FBtr0080105 CG17104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1017 chr2L 7856539 7856605 + 29 NA promoter-TSS (FBgn0040099) protein_coding-promoter-TSS (FBgn0040099) -505 FBgn0040099 FBgn0040099 FBtr0308065 lectin-28C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10802 chr3R 14361970 14362024 + 29 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 9311 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11408 chr3R 20012025 20012090 + 29 NA promoter-TSS (FBgn0029503) protein_coding-promoter-TSS (FBgn0029503) -30 FBgn0029503 FBgn0029503 FBtr0084554 CHORD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1725 chr2L 12852576 12852685 + 29 NA Intergenic Intergenic -29843 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11176 chr3R 16955884 16955942 + 29 NA promoter-TSS (FBgn0038860) protein_coding-promoter-TSS (FBgn0038860) -28 FBgn0038860 FBgn0038860 FBtr0084015 Ice2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3456 chr2L 21770986 21771043 + 29 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 13004 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2889 chr2L 18386194 18386286 + 29 NA exon (FBgn0000636, exon 5 of 5) protein_coding-exon (FBgn0000636, exon 5 of 5) 7614 FBgn0085200 FBgn0085200 FBtr0305066 CG34171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2591 chr2L 17063164 17063231 + 29 NA Intergenic Intergenic -14916 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13207 chrU 2311715 2311823 + 29 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4624 chr2R 7022036 7022092 + 29 NA Intergenic Intergenic -1369 FBgn0033578 FBgn0033578 FBtr0088202 BBS4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11774 chr3R 22937966 22938040 + 29 NA promoter-TSS (FBgn0027574) protein_coding-promoter-TSS (FBgn0027574) -26 FBgn0039487 FBgn0039487 FBtr0085132 gb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2338 chr2L 15817580 15817637 + 29 NA Intergenic Intergenic -5467 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8808 chr3L 23980061 23980115 + 29 NA promoter-TSS (FBgn0058470) protein_coding-promoter-TSS (FBgn0058470) -578 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13815 chrX 18551300 18551379 + 29 NA promoter-TSS (FBgn0001079) protein_coding-promoter-TSS (FBgn0001079) -72 FBgn0030946 FBgn0030946 FBtr0074613 CG6659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2286 chr2L 15536470 15536525 + 29 NA Intergenic Intergenic -11022 FBgn0259922 FBgn0259922 FBtr0300217 CG42448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3450 chr2L 21766026 21766108 + 29 NA exon (FBgn0051612, exon 3 of 4) protein_coding-exon (FBgn0051612, exon 3 of 4) 8057 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6705 chr3L 292291 292367 + 29 NA promoter-TSS (FBgn0264707) protein_coding-promoter-TSS (FBgn0264707) 14892 FBgn0264707 FBgn0264707 FBtr0333957 RhoGEF3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12105 chr3R 24273343 24273421 + 29 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) 29452 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12937 chr4 551584 551654 + 29 NA exon (FBgn0004607, exon 7 of 14) protein_coding-exon (FBgn0004607, exon 7 of 14) 26861 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9097 chr3R 1675087 1675153 + 29 NA TTS (FBgn0029088) protein_coding-TTS (FBgn0029088) 233 FBgn0037389 FBgn0037389 FBtr0306741 CR10991 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12909 chr4 77089 77172 + 29 NA promoter-TSS (FBgn0004859) protein_coding-promoter-TSS (FBgn0004859) 7 FBgn0264617 FBgn0264617 FBtr0333704 CR43957 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5598 chr2R 15412745 15412807 + 29 NA exon (FBgn0003435, exon 11 of 11) protein_coding-exon (FBgn0003435, exon 11 of 11) -11700 FBgn0034458 FBgn0034458 FBtr0086497 Ir56d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3800 chr2L 22675835 22675897 + 29 NA Intergenic Intergenic 15142 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10241 chr3R 10758575 10758636 + 29 NA Intergenic Intergenic 14203 FBgn0038279 FBgn0038279 FBtr0083004 CG3837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9122 chr3R 1891987 1892051 + 29 NA Intergenic Intergenic -8760 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10619 chr3R 13255470 13255536 + 29 NA intron (FBgn0038511, intron 1 of 9) protein_coding-intron (FBgn0038511, intron 1 of 9) 4009 FBgn0038511 FBgn0038511 FBtr0083442 CG5873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8679 chr3L 22145519 22145577 + 29 NA intron (FBgn0037153, intron 1 of 10) protein_coding-intron (FBgn0037153, intron 1 of 10) 16358 FBgn0037153 FBgn0037153 FBtr0301492 olf413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3808 chr2L 22701688 22702709 + 29 NA Intergenic Intergenic -11190 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8311 chr3L 16884090 16884376 + 29 NA promoter-TSS (FBgn0261565) protein_coding-promoter-TSS (FBgn0261565) 4027 FBgn0261565 FBgn0261565 FBtr0302784 Lmpt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2308 chr2L 15604441 15604495 + 29 NA Intergenic Intergenic 7501 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3645 chr2L 22196354 22196474 + 29 NA exon (FBgn0259683, exon 5 of 7) protein_coding-exon (FBgn0259683, exon 5 of 7) 17851 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7682 chr3L 11736893 11736982 + 29 NA exon (FBgn0036202, exon 3 of 8) protein_coding-exon (FBgn0036202, exon 3 of 8) -7468 FBgn0041231 FBgn0041231 FBtr0076118 Gr68a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7255 chr3L 6962124 6962186 + 29 NA promoter-TSS (FBgn0035726) protein_coding-promoter-TSS (FBgn0035726) -7 FBgn0035725 FBgn0035725 FBtr0076936 Mis12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10189 chr3R 10217094 10217245 + 29 NA TTS (FBgn0086901) protein_coding-TTS (FBgn0086901) 4996 FBgn0262327 FBgn0262327 FBtr0304502 mir-2281 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4182 chr2R 3595420 3595497 + 29 NA intron (FBgn0003733, intron 5 of 14) protein_coding-intron (FBgn0003733, intron 4 of 13) 1584 FBgn0003733 FBgn0003733 FBtr0088938 tor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11283 chr3R 17959463 17959731 + 29 NA promoter-TSS (FBgn0051163) protein_coding-promoter-TSS (FBgn0051163) 40 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5746 chr2R 16466888 16466942 + 29 NA intron (FBgn0028622, intron 2 of 7) protein_coding-intron (FBgn0028622, intron 2 of 7) 2718 FBgn0028622 FBgn0028622 FBtr0086258 qsm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6700 chr3L 199228 199381 + 29 NA promoter-TSS (FBgn0035107) protein_coding-promoter-TSS (FBgn0035107) 458 FBgn0035106 FBgn0035106 FBtr0305548 rno protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13620 chrX 8819002 8819056 + 29 NA promoter-TSS (FBgn0261549) protein_coding-promoter-TSS (FBgn0261549) -188 FBgn0261549 FBgn0261549 FBtr0302662 rdgA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13700 chrX 13037449 13037514 + 29 NA intron (FBgn0052645, intron 1 of 5) protein_coding-intron (FBgn0052645, intron 1 of 5) 4242 FBgn0052645 FBgn0052645 FBtr0073725 CG32645 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8850 chr3LHet 490410 490469 + 29 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8652 chr3L 21625817 21625880 + 29 NA exon (FBgn0037109, exon 3 of 4) protein_coding-exon (FBgn0037109, exon 3 of 4) 1698 FBgn0037109 FBgn0037109 FBtr0302592 MED1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9113 chr3R 1861356 1861410 + 29 NA Intergenic Intergenic 7894 FBgn0037397 FBgn0037397 FBtr0307114 CR1075 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_780 chr2L 5580529 5580730 + 29 NA exon (FBgn0031722, exon 2 of 2) protein_coding-exon (FBgn0031722, exon 2 of 2) 487 FBgn0031722 FBgn0031722 FBtr0079120 CG14011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_173 chr2L 1142774 1142868 + 29 NA promoter-TSS (FBgn0031307) protein_coding-promoter-TSS (FBgn0031307) -380 FBgn0031307 FBgn0031307 FBtr0077958 MFS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9380 chr3R 3635961 3636187 + 29 NA promoter-TSS (FBgn0051472) protein_coding-promoter-TSS (FBgn0051472) -180 FBgn0051472 FBgn0051472 FBtr0081747 CG31472 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2823 chr2L 18036674 18036738 + 29 NA intron (FBgn0243486, intron 3 of 14) protein_coding-intron (FBgn0243486, intron 3 of 14) 24299 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_275 chr2L 1474604 1474668 + 29 NA Intergenic Intergenic -17659 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4914 chr2R 9178951 9179014 + 29 NA intron (FBgn0052843, intron 1 of 10) protein_coding-intron (FBgn0052843, intron 1 of 10) 4447 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6271 chr2R 20964264 20964385 + 29 NA promoter-TSS (FBgn0050199) tRNA-promoter-TSS (FBgn0050199) 36 FBgn0050199 FBgn0050199 FBtr0072446 tRNA:CR30199 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1561 chr2L 11680793 11680851 + 29 NA Intergenic Intergenic -14034 FBgn0032372 FBgn0032372 FBtr0080254 CG4988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_533 chr2L 3657981 3658098 + 29 NA Intergenic Intergenic -4706 FBgn0085369 FBgn0085369 FBtr0302391 CG34340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8105 chr3L 15014431 15014494 + 29 NA intron (FBgn0261090, intron 1 of 7) protein_coding-intron (FBgn0261090, intron 2 of 7) -2130 FBgn0047338 FBgn0047338 FBtr0075630 CG32148 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8175 chr3L 15828469 15828557 + 29 NA promoter-TSS (FBgn0036537) protein_coding-promoter-TSS (FBgn0036537) -25 FBgn0036537 FBgn0036537 FBtr0332134 CG18081 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8977 chr3R 629133 629312 + 29 NA intron (FBgn0260794, intron 1 of 10) protein_coding-intron (FBgn0260794, intron 1 of 11) 8561 FBgn0026417 FBgn0026417 FBtr0078876 Hus1-like protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13047 chrU 42462 42519 + 29 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12825 chr3RHet 189466 189532 + 29 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11104 chr3R 16310945 16311132 + 29 NA promoter-TSS (FBgn0262869) protein_coding-promoter-TSS (FBgn0262869) -765 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11324 chr3R 18552099 18552161 + 29 NA promoter-TSS (FBgn0039013) protein_coding-promoter-TSS (FBgn0039013) -26 FBgn0039013 FBgn0039013 FBtr0084326 CG4813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2665 chr2L 17342830 17343235 + 29 NA Intergenic Intergenic 11636 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6266 chr2R 20929175 20929229 + 29 NA exon (FBgn0001147, exon 4 of 5) protein_coding-exon (FBgn0001147, exon 4 of 5) 9299 FBgn0035092 FBgn0035092 FBtr0110861 Nplp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4695 chr2R 7482810 7482864 + 29 NA intron (FBgn0033636, intron 1 of 16) protein_coding-intron (FBgn0033636, intron 1 of 16) -3847 FBgn0086658 FBgn0086658 FBtr0091640 snoRNA:Psi28S-1180 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5061 chr2R 10372510 10372575 + 29 NA intron (FBgn0001332, intron 1 of 3) protein_coding-intron (FBgn0001332, intron 1 of 3) 3826 FBgn0001332 FBgn0001332 FBtr0087492 L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12097 chr3R 24247501 24247555 + 29 NA intron (FBgn0039584, intron 1 of 6) protein_coding-intron (FBgn0039584, intron 1 of 6) 3598 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7099 chr3L 5633009 5633225 + 29 NA intron (FBgn0035625, intron 1 of 5) protein_coding-intron (FBgn0035625, intron 1 of 4) -3630 FBgn0035625 FBgn0035625 FBtr0331809 Blimp-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13461 chrX 1512244 1512311 + 29 NA promoter-TSS (FBgn0025390) protein_coding-promoter-TSS (FBgn0025390) -89 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2143 chr2L 14995537 14995609 + 29 NA intron (FBgn0086711, intron 1 of 5) protein_coding-intron (FBgn0086711, intron 1 of 7) 1986 FBgn0086711 FBgn0086711 FBtr0332521 mol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4236 chr2R 4088700 4088755 + 29 NA intron (FBgn0053087, intron 2 of 22) protein_coding-intron (FBgn0053087, intron 2 of 22) 4484 FBgn0033275 FBgn0033275 FBtr0088804 CG14756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7494 chr3L 9313038 9313096 + 29 NA Intergenic Intergenic -15722 FBgn0035975 FBgn0035975 FBtr0076433 PGRP-LA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5154 chr2R 11119474 11119530 + 29 NA intron (FBgn0259878, intron 7 of 8) protein_coding-intron (FBgn0259878, intron 7 of 8) 9582 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6047 chr2R 18973143 18973197 + 29 NA TTS (FBgn0034819) protein_coding-TTS (FBgn0034819) 614 FBgn0034819 FBgn0034819 FBtr0071980 CG9877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11527 chr3R 21809137 21809222 + 29 NA intron (FBgn0015269, intron 1 of 16) protein_coding-intron (FBgn0015269, intron 1 of 17) 444 FBgn0015269 FBgn0015269 FBtr0084952 Nf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11755 chr3R 22856306 22856361 + 29 NA intron (FBgn0004842, intron 3 of 7) protein_coding-intron (FBgn0004842, intron 3 of 7) -4502 FBgn0039476 FBgn0039476 FBtr0085149 CG6271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11350 chr3R 19047720 19047796 + 29 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) -75 FBgn0262975 FBgn0262975 FBtr0308227 cnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13195 chrU 1975149 1975303 + 29 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9743 chr3R 6694355 6694437 + 29 NA promoter-TSS (FBgn0037848) protein_coding-promoter-TSS (FBgn0037848) -39 FBgn0037848 FBgn0037848 FBtr0306640 Tsp86D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8266 chr3L 16477266 16477340 + 29 NA promoter-TSS (FBgn0004569) protein_coding-promoter-TSS (FBgn0004569) -553 FBgn0004569 FBgn0004569 FBtr0075408 aos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11080 chr3R 16193383 16193438 + 29 NA Intergenic Intergenic 7380 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5931 chr2R 17990390 17990454 + 29 NA promoter-TSS (FBgn0034694) protein_coding-promoter-TSS (FBgn0034694) -271 FBgn0034694 FBgn0034694 FBtr0071758 CG6613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7149 chr3L 6099931 6099985 + 29 NA intron (FBgn0005658, intron 4 of 9) protein_coding-intron (FBgn0005658, intron 4 of 9) -4609 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3087 chr2L 19743954 19744098 + 29 NA exon (FBgn0032817, exon 7 of 8) protein_coding-exon (FBgn0032817, exon 7 of 8) 7984 FBgn0032816 FBgn0032816 FBtr0081289 Nf-YB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7829 chr3L 12743157 12743245 + 29 NA promoter-TSS (FBgn0036305) protein_coding-promoter-TSS (FBgn0036305) -130 FBgn0036305 FBgn0036305 FBtr0075921 CG10984 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11157 chr3R 16732933 16732987 + 29 NA exon (FBgn0038840, exon 11 of 11) protein_coding-exon (FBgn0038840, exon 11 of 11) -1720 FBgn0044810 FBgn0044810 FBtr0083985 TotX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3146 chr2L 20046829 20046889 + 29 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 14116 FBgn0014127 FBgn0014127 FBtr0081349 barr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2128 chr2L 14937748 14937802 + 29 NA intron (FBgn0259213, intron 4 of 19) protein_coding-intron (FBgn0259213, intron 4 of 19) 13040 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13652 chrX 10806847 10806901 + 29 NA exon (FBgn0264502, exon 2 of 8) protein_coding-exon (FBgn0264502, exon 2 of 8) 7074 FBgn0264502 FBgn0264502 FBtr0332933 CG43901 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4220 chr2R 3918340 3918550 + 29 NA promoter-TSS (FBgn0025360) protein_coding-promoter-TSS (FBgn0025360) -344 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2871 chr2L 18281228 18281402 + 29 NA Intergenic Intergenic 4369 FBgn0051787 FBgn0051787 FBtr0081055 CG31787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9031 chr3R 996780 996834 + 29 NA TTS (FBgn0037295) protein_coding-TTS (FBgn0037295) 5778 FBgn0037295 FBgn0037295 FBtr0110950 dpr16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13416 chrUextra 28548021 28548075 + 29 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8310 chr3L 16858327 16858384 + 29 NA promoter-TSS (FBgn0261565) protein_coding-promoter-TSS (FBgn0261565) 2091 FBgn0036671 FBgn0036671 FBtr0075337 CG9951 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6106 chr2R 19524043 19524257 + 29 NA intron (FBgn0004795, intron 1 of 11) protein_coding-intron (FBgn0004795, intron 1 of 11) 4015 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8969 chr3R 574755 574823 + 29 NA promoter-TSS (FBgn0026620) protein_coding-promoter-TSS (FBgn0026620) -11 FBgn0026620 FBgn0026620 FBtr0089951 tacc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3354 chr2L 21207485 21207557 + 29 NA exon (FBgn0026255, exon 5 of 12) protein_coding-exon (FBgn0026255, exon 5 of 12) 1001 FBgn0026255 FBgn0026255 FBtr0081476 clumsy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12053 chr3R 24059874 24060065 + 29 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 29375 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1517 chr2L 11255482 11255566 + 29 NA exon (FBgn0264442, exon 7 of 7) protein_coding-exon (FBgn0264442, exon 7 of 7) 13478 FBgn0040232 FBgn0040232 FBtr0332205 cmet protein_coding Nup98-S2-pascual-garcia2017_R1_peak_280 chr2L 1486050 1486108 + 29 NA Intergenic Intergenic -6216 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2117 chr2L 14912115 14912178 + 29 NA exon (FBgn0259213, exon 19 of 20) protein_coding-exon (FBgn0259213, exon 19 of 20) -12589 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11680 chr3R 22481616 22481670 + 29 NA promoter-TSS (FBgn0243586) protein_coding-promoter-TSS (FBgn0243586) -525 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13839 chrX 21102331 21102479 + 28 NA promoter-TSS (FBgn0011954) tRNA-promoter-TSS (FBgn0011954) 21 FBgn0052518 FBgn0052518 FBtr0077238 tRNA:CR32518:Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4006 chr2R 1606309 1606363 + 28 NA intron (FBgn0000099, intron 1 of 7) protein_coding-intron (FBgn0000099, intron 1 of 7) -1782 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4661 chr2R 7292703 7292820 + 28 NA promoter-TSS (FBgn0033633) protein_coding-promoter-TSS (FBgn0033633) -455 FBgn0033633 FBgn0033633 FBtr0088134 CG7759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_699 chr2L 4818222 4818277 + 28 NA promoter-TSS (FBgn0031631) protein_coding-promoter-TSS (FBgn0031631) -4 FBgn0031631 FBgn0031631 FBtr0077416 CG3225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7109 chr3L 5790516 5790609 + 28 NA promoter-TSS (FBgn0035638) protein_coding-promoter-TSS (FBgn0035638) -919 FBgn0035638 FBgn0035638 FBtr0077115 Tektin-C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4943 chr2R 9364614 9364668 + 28 NA promoter-TSS (FBgn0262821) protein_coding-promoter-TSS (FBgn0262821) -206 FBgn0262821 FBgn0262821 FBtr0306064 CG43192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13192 chrU 1972912 1973016 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_133 chr2L 984676 984737 + 28 NA Intergenic Intergenic 42184 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13151 chrU 1226357 1226411 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3072 chr2L 19693144 19693200 + 28 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 7796 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8996 chr3R 762992 763047 + 28 NA exon (FBgn0085335, exon 2 of 2) protein_coding-exon (FBgn0085335, exon 2 of 2) 10376 FBgn0085335 FBgn0085335 FBtr0112502 CG34306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3457 chr2L 21771478 21771621 + 28 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 12516 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2946 chr2L 18947589 18947643 + 28 NA TTS (FBgn0262095) protein_coding-TTS (FBgn0262095) -1281 FBgn0032724 FBgn0032724 FBtr0081132 CG10428 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9872 chr3R 7793364 7793475 + 28 NA promoter-TSS (FBgn0260743) protein_coding-promoter-TSS (FBgn0260743) -32 FBgn0260743 FBgn0260743 FBtr0082484 CG18347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8518 chr3L 18611360 18611585 + 28 NA promoter-TSS (FBgn0052200) tRNA-promoter-TSS (FBgn0052200) -18 FBgn0052200 FBgn0052200 FBtr0075107 tRNA:CR32200 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8645 chr3L 21490561 21490628 + 28 NA promoter-TSS (FBgn0015239) protein_coding-promoter-TSS (FBgn0015239) -43 FBgn0264554 FBgn0264554 FBtr0333297 CG43933 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1611 chr2L 12142599 12142677 + 28 NA promoter-TSS (FBgn0051760) protein_coding-promoter-TSS (FBgn0051760) -2411 FBgn0051760 FBgn0051760 FBtr0331997 CG31760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12542 chr3R 26503420 26503492 + 28 NA Intergenic Intergenic -12910 FBgn0039795 FBgn0039795 FBtr0085698 Spn100A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10222 chr3R 10522965 10523151 + 28 NA promoter-TSS (FBgn0051314) protein_coding-promoter-TSS (FBgn0051314) -1 FBgn0051314 FBgn0051314 FBtr0301499 Neu3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7168 chr3L 6238324 6238405 + 28 NA TTS (FBgn0035696) protein_coding-TTS (FBgn0035696) 482 FBgn0004513 FBgn0004513 FBtr0077011 Mdr65 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6675 chr2RHet 2595725 2595779 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4986 chr2R 9677048 9677104 + 28 NA Intergenic Intergenic -2375 FBgn0264359 FBgn0264359 FBtr0332254 CR43811 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9500 chr3R 4495170 4495390 + 28 NA promoter-TSS (FBgn0037607) protein_coding-promoter-TSS (FBgn0037607) -384 FBgn0012024 FBgn0012024 FBtr0081884 tRNA:Y1:85Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_10006 chr3R 8772041 8772104 + 28 NA Intergenic Intergenic -15402 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2942 chr2L 18881364 18881653 + 28 NA promoter-TSS (FBgn0003896) protein_coding-promoter-TSS (FBgn0003896) -252 FBgn0003896 FBgn0003896 FBtr0081111 tup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9138 chr3R 2038866 2038933 + 28 NA exon (FBgn0037410, exon 5 of 5) protein_coding-exon (FBgn0037410, exon 5 of 5) -2661 FBgn0037411 FBgn0037411 FBtr0078594 Osi3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4902 chr2R 9046171 9046225 + 28 NA promoter-TSS (FBgn0020370) protein_coding-promoter-TSS (FBgn0020370) 80 FBgn0085468 FBgn0085468 FBtr0112740 CG34439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10050 chr3R 9134995 9135068 + 28 NA promoter-TSS (FBgn0052473) protein_coding-promoter-TSS (FBgn0052473) 108 FBgn0052473 FBgn0052473 FBtr0082744 CG32473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13170 chrU 1394032 1394440 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1672 chr2L 12628612 12628669 + 28 NA TTS (FBgn0085424) protein_coding-TTS (FBgn0085424) 10292 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13203 chrU 2294896 2295008 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1377 chr2L 9758974 9759037 + 28 NA intron (FBgn0022720, intron 1 of 3) protein_coding-intron (FBgn0022720, intron 1 of 3) 667 FBgn0022720 FBgn0022720 FBtr0079865 zf30C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13395 chrUextra 23971147 23971201 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10717 chr3R 13858068 13858251 + 28 NA Intergenic Intergenic 8730 FBgn0038565 FBgn0038565 FBtr0083540 CG7794 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5301 chr2R 12445487 12445565 + 28 NA TTS (FBgn0034136) protein_coding-TTS (FBgn0034136) 5761 FBgn0034135 FBgn0034135 FBtr0087097 Syn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_922 chr2L 6797558 6797661 + 28 NA promoter-TSS (FBgn0015777) protein_coding-promoter-TSS (FBgn0015777) 585 FBgn0015777 FBgn0015777 FBtr0100381 nrv2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4599 chr2R 6685370 6685529 + 28 NA Intergenic Intergenic -3597 FBgn0053144 FBgn0053144 FBtr0088254 CG33144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2989 chr2L 19254694 19254752 + 28 NA Intergenic Intergenic 8170 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6369 chr2RHet 556321 556377 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2454 chr2L 16350273 16350327 + 28 NA promoter-TSS (FBgn0000307) protein_coding-promoter-TSS (FBgn0000307) -17 FBgn0000307 FBgn0000307 FBtr0321313 chif protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8845 chr3LHet 296915 297006 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9243 chr3R 2674282 2674453 + 28 NA promoter-TSS (FBgn0003339) protein_coding-promoter-TSS (FBgn0003339) 1336 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10157 chr3R 9913753 9914482 + 28 NA TTS (FBgn0038197) protein_coding-TTS (FBgn0038197) -2379 FBgn0038198 FBgn0038198 FBtr0082889 Npc2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_694 chr2L 4807286 4807340 + 28 NA Intergenic Intergenic -5390 FBgn0031629 FBgn0031629 FBtr0332595 Clect27 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13783 chrX 17291265 17291464 + 28 NA promoter-TSS (FBgn0011758) protein_coding-promoter-TSS (FBgn0011758) -170 FBgn0011758 FBgn0011758 FBtr0074430 B-H1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12591 chr3R 26763723 26763777 + 28 NA promoter-TSS (FBgn0039811) protein_coding-promoter-TSS (FBgn0039811) -926 FBgn0039811 FBgn0039811 FBtr0085751 CG15550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6731 chr3L 611565 611973 + 28 NA Intergenic Intergenic 4877 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11206 chr3R 17259880 17260275 + 28 NA promoter-TSS (FBgn0008651) protein_coding-promoter-TSS (FBgn0008651) -222 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4405 chr2R 5211321 5211386 + 28 NA intron (FBgn0033403, intron 2 of 3) protein_coding-intron (FBgn0033403, intron 2 of 3) -10746 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13311 chrUextra 417093 417248 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12233 chr3R 24764589 24764649 + 28 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 15853 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9058 chr3R 1319130 1319199 + 28 NA exon (FBgn0051547, exon 3 of 10) protein_coding-exon (FBgn0051547, exon 3 of 10) 5572 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5945 chr2R 18129733 18129840 + 28 NA Intergenic Intergenic -14062 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3 chr2L 18613 18691 + 28 NA promoter-TSS (FBgn0002121) protein_coding-promoter-TSS (FBgn0002121) 2724 FBgn0002121 FBgn0002121 FBtr0078171 l(2)gl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12159 chr3R 24488827 24488892 + 28 NA Intergenic Intergenic -6096 FBgn0053346 FBgn0053346 FBtr0302527 CG33346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4402 chr2R 5205691 5205745 + 28 NA exon (FBgn0033403, exon 3 of 4) protein_coding-exon (FBgn0033403, exon 3 of 4) -5111 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_717 chr2L 5055103 5055174 + 28 NA promoter-TSS (FBgn0014857) protein_coding-promoter-TSS (FBgn0014857) 4 FBgn0014857 FBgn0014857 FBtr0333537 His3.3A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3698 chr2L 22344293 22344359 + 28 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) 3704 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_160 chr2L 1049262 1049612 + 28 NA TTS (FBgn0003310) protein_coding-TTS (FBgn0003310) 12191 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11288 chr3R 18002614 18002688 + 28 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -34895 FBgn0038934 FBgn0038934 FBtr0305038 Gld2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1090 chr2L 8544187 8544271 + 28 NA intron (FBgn0011259, intron 1 of 20) protein_coding-intron (FBgn0011259, intron 1 of 21) 899 FBgn0011259 FBgn0011259 FBtr0329930 Sema-1a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6299 chr2RHet 45358 45412 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8495 chr3L 18231961 18232041 + 28 NA Intergenic Intergenic -13187 FBgn0036783 FBgn0036783 FBtr0075129 CheA75a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6849 chr3L 1602110 1602237 + 28 NA promoter-TSS (FBgn0035240) protein_coding-promoter-TSS (FBgn0035240) 501 FBgn0035238 FBgn0035238 FBtr0072825 CG12104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6430 chr2RHet 946453 946692 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2457 chr2L 16380238 16380292 + 28 NA Intergenic Intergenic 14346 FBgn0028841 FBgn0028841 FBtr0080859 jhamt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_932 chr2L 6852271 6852329 + 28 NA promoter-TSS (FBgn0017551) protein_coding-promoter-TSS (FBgn0017551) -24 FBgn0017551 FBgn0017551 FBtr0079342 Rca1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9062 chr3R 1332979 1333038 + 28 NA Intergenic Intergenic -8272 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_630 chr2L 4394180 4394240 + 28 NA promoter-TSS (FBgn0022153) protein_coding-promoter-TSS (FBgn0022153) 14 FBgn0022153 FBgn0022153 FBtr0331448 l(2)k05819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13634 chrX 9623143 9623229 + 28 NA promoter-TSS (FBgn0020378) protein_coding-promoter-TSS (FBgn0020378) -495 FBgn0020378 FBgn0020378 FBtr0331335 Sp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5903 chr2R 17735950 17736016 + 28 NA promoter-TSS (FBgn0050406) tRNA-promoter-TSS (FBgn0050406) 0 FBgn0050406 FBgn0050406 FBtr0071736 tRNA:CR30406 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3880 chr2LHet 245687 245741 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11374 chr3R 19279346 19279400 + 28 NA intron (FBgn0039078, intron 1 of 3) protein_coding-intron (FBgn0039078, intron 1 of 3) -22177 FBgn0039078 FBgn0039078 FBtr0310575 CG4374 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4642 chr2R 7177284 7177347 + 28 NA promoter-TSS (FBgn0033609) protein_coding-promoter-TSS (FBgn0033609) -62 FBgn0033609 FBgn0033609 FBtr0088178 fbl6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7441 chr3L 8777472 8777622 + 28 NA intron (FBgn0261259, intron 5 of 18) protein_coding-intron (FBgn0261259, intron 3 of 16) 4098 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2078 chr2L 14766765 14766840 + 28 NA exon (FBgn0028868, exon 1 of 1) protein_coding-exon (FBgn0028868, exon 1 of 1) 894 FBgn0028868 FBgn0028868 FBtr0080672 CG4701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6166 chr2R 20118301 20118356 + 28 NA Intergenic Intergenic -1017 FBgn0050419 FBgn0050419 FBtr0072275 CG30419 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6294 chr2RHet 21517 21571 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1886 chr2L 14123348 14123402 + 28 NA Intergenic Intergenic -11116 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10145 chr3R 9779307 9779361 + 28 NA Intergenic Intergenic -2474 FBgn0038190 FBgn0038190 FBtr0082877 CG9926 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8229 chr3L 16245730 16245785 + 28 NA promoter-TSS (FBgn0036583) protein_coding-promoter-TSS (FBgn0036583) -302 FBgn0036583 FBgn0036583 FBtr0075482 CG13055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8100 chr3L 14935288 14935356 + 28 NA exon (FBgn0259099, exon 11 of 11) protein_coding-exon (FBgn0259099, exon 11 of 11) 2109 FBgn0040809 FBgn0040809 FBtr0075674 CG13465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10437 chr3R 11997912 11997966 + 28 NA TTS (FBgn0063649) protein_coding-TTS (FBgn0063649) 208 FBgn0038404 FBgn0038404 FBtr0113241 CG8925 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2594 chr2L 17073694 17073753 + 28 NA Intergenic Intergenic -11927 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5033 chr2R 10164263 10164317 + 28 NA intron (FBgn0263397, intron 1 of 7) protein_coding-intron (FBgn0263397, intron 1 of 14) 5984 FBgn0261269 FBgn0261269 FBtr0087540 conv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3142 chr2L 20033950 20034021 + 28 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 6070 FBgn0032840 FBgn0032840 FBtr0081327 sNPF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8145 chr3L 15443039 15443292 + 28 NA Intergenic Intergenic 12864 FBgn0263616 FBgn0263616 FBtr0309981 CR43625 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4658 chr2R 7281803 7281943 + 28 NA promoter-TSS (FBgn0050257) tRNA-promoter-TSS (FBgn0050257) 15 FBgn0050257 FBgn0050257 FBtr0088131 tRNA:CR30257 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3462 chr2L 21780845 21781066 + 28 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) 3110 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3062 chr2L 19677211 19677265 + 28 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 23730 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1582 chr2L 11813763 11813817 + 28 NA promoter-TSS (FBgn0032378) protein_coding-promoter-TSS (FBgn0032378) -10 FBgn0032378 FBgn0032378 FBtr0080259 CycY protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1552 chr2L 11550287 11550349 + 28 NA Intergenic Intergenic 14173 FBgn0263386 FBgn0263386 FBtr0309073 CG43438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8473 chr3L 18072396 18072481 + 28 NA Intergenic Intergenic -5956 FBgn0085281 FBgn0085281 FBtr0112446 CG34252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6071 chr2R 19220175 19220233 + 28 NA Intergenic Intergenic -2611 FBgn0050413 FBgn0050413 FBtr0072040 CG30413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6044 chr2R 18940839 18940906 + 28 NA Intergenic Intergenic -4934 FBgn0050194 FBgn0050194 FBtr0300176 CG30194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9783 chr3R 6960402 6960480 + 28 NA Intergenic Intergenic -2458 FBgn0037862 FBgn0037862 FBtr0082336 CG4706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13110 chrU 247254 247409 + 28 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10615 chr3R 13199978 13200067 + 28 NA TTS (FBgn0038499) protein_coding-TTS (FBgn0038499) -8183 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7290 chr3L 7204032 7204090 + 28 NA Intergenic Intergenic -21044 FBgn0263218 FBgn0263218 FBtr0299546 Dscam2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1064 chr2L 8290709 8290802 + 28 NA promoter-TSS (FBgn0011902) tRNA-promoter-TSS (FBgn0011902) 28 FBgn0011902 FBgn0011902 FBtr0079596 tRNA:K5:29A tRNA Nup98-S2-pascual-garcia2017_R1_peak_2469 chr2L 16432930 16433162 + 28 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -12234 FBgn0020416 FBgn0020416 FBtr0080860 Idgf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4469 chr2R 5671178 5671232 + 28 NA intron (FBgn0027589, intron 2 of 8) protein_coding-intron (FBgn0027589, intron 2 of 8) -9643 FBgn0033443 FBgn0033443 FBtr0088474 CG1698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13835 chrX 20406418 20406514 + 28 NA intron (FBgn0259162, intron 1 of 5) protein_coding-intron (FBgn0259162, intron 1 of 5) -3058 FBgn0259162 FBgn0259162 FBtr0332385 RunxB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1512 chr2L 11219133 11219189 + 28 NA intron (FBgn0264442, intron 1 of 6) protein_coding-intron (FBgn0264442, intron 2 of 8) -13069 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5639 chr2R 15658478 15658532 + 28 NA exon (FBgn0034473, exon 1 of 6) protein_coding-exon (FBgn0034473, exon 1 of 6) 233 FBgn0034473 FBgn0034473 FBtr0086344 Or56a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6020 chr2R 18799533 18799769 + 27 NA exon (FBgn0034797, exon 5 of 11) protein_coding-exon (FBgn0034797, exon 5 of 11) 6638 FBgn0050187 FBgn0050187 FBtr0304796 CG30187 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13079 chrU 152918 153113 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3031 chr2L 19453569 19453629 + 27 NA promoter-TSS (FBgn0032785) protein_coding-promoter-TSS (FBgn0032785) -109 FBgn0003732 FBgn0003732 FBtr0081287 Top2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12054 chr3R 24061045 24061113 + 27 NA exon (FBgn0085383, exon 6 of 9) protein_coding-exon (FBgn0085383, exon 6 of 9) 28265 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13086 chrU 174258 174381 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8613 chr3L 20699183 20699247 + 27 NA Intergenic Intergenic -7985 FBgn0085289 FBgn0085289 FBtr0333482 CG34260 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7484 chr3L 9127568 9127691 + 27 NA promoter-TSS (FBgn0035964) protein_coding-promoter-TSS (FBgn0035964) -31 FBgn0035964 FBgn0035964 FBtr0100531 Dhpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10528 chr3R 12600575 12600652 + 27 NA Intergenic Intergenic -8535 FBgn0085056 FBgn0085056 FBtr0113492 tre-1 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3553 chr2L 21980117 21980191 + 27 NA Intergenic Intergenic 12779 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1380 chr2L 9807271 9807370 + 27 NA exon (FBgn0032151, exon 8 of 14) protein_coding-exon (FBgn0032151, exon 8 of 14) -14213 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8390 chr3L 17455768 17455822 + 27 NA Intergenic Intergenic -3250 FBgn0036726 FBgn0036726 FBtr0075220 CG7603 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9802 chr3R 7147087 7147152 + 27 NA Intergenic Intergenic -11781 FBgn0004595 FBgn0004595 FBtr0304607 pros protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2561 chr2L 16968972 16969185 + 27 NA Intergenic Intergenic -4013 FBgn0053179 FBgn0053179 FBtr0329973 beat-IIIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8874 chr3LHet 949019 949086 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10197 chr3R 10307645 10307700 + 27 NA promoter-TSS (FBgn0086901) protein_coding-promoter-TSS (FBgn0086901) -262 FBgn0086901 FBgn0086901 FBtr0112631 cv-c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9139 chr3R 2041410 2041471 + 27 NA promoter-TSS (FBgn0037411) protein_coding-promoter-TSS (FBgn0037411) -120 FBgn0037411 FBgn0037411 FBtr0078594 Osi3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8373 chr3L 17313555 17313631 + 27 NA exon (FBgn0036706, exon 1 of 1) protein_coding-exon (FBgn0036706, exon 1 of 1) 318 FBgn0036706 FBgn0036706 FBtr0075249 CG6485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13599 chrX 7969551 7969646 + 27 NA promoter-TSS (FBgn0029993) protein_coding-promoter-TSS (FBgn0029993) -90 FBgn0029992 FBgn0029992 FBtr0071117 Upf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6872 chr3L 1876301 1876433 + 27 NA promoter-TSS (FBgn0002183) protein_coding-promoter-TSS (FBgn0002183) -55 FBgn0002183 FBgn0002183 FBtr0072865 dre4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11867 chr3R 23321072 23321130 + 27 NA Intergenic Intergenic 6646 FBgn0262613 FBgn0262613 FBtr0305290 CG43139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8082 chr3L 14732913 14732967 + 27 NA exon (FBgn0259175, exon 3 of 11) protein_coding-exon (FBgn0259175, exon 3 of 11) -6323 FBgn0036443 FBgn0036443 FBtr0075709 CG13471 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_343 chr2L 1909854 1909958 + 27 NA exon (FBgn0031374, exon 2 of 19) protein_coding-exon (FBgn0031374, exon 2 of 19) 25284 FBgn0031374 FBgn0031374 FBtr0110882 CG7337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3307 chr2L 20851756 20851825 + 27 NA promoter-TSS (FBgn0032895) protein_coding-promoter-TSS (FBgn0032895) -791 FBgn0032895 FBgn0032895 FBtr0081426 CG9335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13275 chrU 7026683 7026738 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10642 chr3R 13416321 13416401 + 27 NA Intergenic Intergenic -3747 FBgn0038523 FBgn0038523 FBtr0083460 CG7587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9647 chr3R 5896046 5896116 + 27 NA promoter-TSS (FBgn0041105) protein_coding-promoter-TSS (FBgn0041105) -758 FBgn0041105 FBgn0041105 FBtr0330083 nerfin-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5593 chr2R 15302056 15302136 + 27 NA promoter-TSS (FBgn0028981) tRNA-promoter-TSS (FBgn0028981) -7 FBgn0028981 FBgn0028981 FBtr0086526 tRNA:S4:56D tRNA Nup98-S2-pascual-garcia2017_R1_peak_6445 chr2RHet 1286137 1286191 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1142 chr2L 8645670 8645741 + 27 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) 25677 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4210 chr2R 3894853 3894996 + 27 NA TTS (FBgn0013307) protein_coding-TTS (FBgn0013307) 155 FBgn0013308 FBgn0013308 FBtr0088864 Odc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_312 chr2L 1602284 1602361 + 27 NA exon (FBgn0261509, exon 5 of 11) protein_coding-exon (FBgn0261509, exon 5 of 11) 8803 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13530 chrX 4319124 4319372 + 27 NA intron (FBgn0000179, intron 1 of 7) protein_coding-intron (FBgn0000179, intron 1 of 7) 12359 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1806 chr2L 13460730 13460924 + 27 NA promoter-TSS (FBgn0263354) protein_coding-promoter-TSS (FBgn0263354) -947 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7903 chr3L 13370143 13370211 + 27 NA promoter-TSS (FBgn0036350) protein_coding-promoter-TSS (FBgn0036350) -910 FBgn0036350 FBgn0036350 FBtr0331787 CG14111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_406 chr2L 2546468 2546522 + 27 NA Intergenic Intergenic 6349 FBgn0031431 FBgn0031431 FBtr0077750 CG3515 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2791 chr2L 17940975 17941167 + 27 NA Intergenic Intergenic -21940 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9895 chr3R 7990847 7990910 + 27 NA exon (FBgn0261714, exon 2 of 3) protein_coding-exon (FBgn0261714, exon 2 of 3) 1030 FBgn0261714 FBgn0261714 FBtr0082548 Cpn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7660 chr3L 11464225 11464312 + 27 NA Intergenic Intergenic -2123 FBgn0028667 FBgn0028667 FBtr0076090 Vha16-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13827 chrX 19716661 19716936 + 27 NA TTS (FBgn0031074) protein_coding-TTS (FBgn0031074) 1234 FBgn0031074 FBgn0031074 FBtr0074806 skpE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5432 chr2R 13812532 13812703 + 27 NA exon (FBgn0011589, exon 17 of 17) protein_coding-exon (FBgn0011589, exon 17 of 17) 30034 FBgn0034284 FBgn0034284 FBtr0086803 CG14491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3089 chr2L 19746918 19746973 + 27 NA exon (FBgn0032817, exon 7 of 8) protein_coding-exon (FBgn0032817, exon 7 of 8) 9922 FBgn0032817 FBgn0032817 FBtr0081324 CG10631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10115 chr3R 9623545 9623713 + 27 NA promoter-TSS (FBgn0051588) tRNA-promoter-TSS (FBgn0051588) -46 FBgn0051588 FBgn0051588 FBtr0082834 tRNA:CR31588 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1997 chr2L 14470112 14470310 + 27 NA Intergenic Intergenic -19289 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4543 chr2R 6235365 6235421 + 27 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 4273 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3055 chr2L 19628311 19628516 + 27 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 41790 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3135 chr2L 19995624 19995738 + 27 NA intron (FBgn0264443, intron 2 of 5) protein_coding-intron (FBgn0264443, intron 2 of 5) 16852 FBgn0263611 FBgn0263611 FBtr0309974 CR43620 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1632 chr2L 12341840 12341922 + 27 NA Intergenic Intergenic 2385 FBgn0264361 FBgn0264361 FBtr0332235 CG43813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6316 chr2RHet 133636 133805 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13831 chrX 19919104 19919182 + 27 NA promoter-TSS (FBgn0052826) tRNA-promoter-TSS (FBgn0052826) 11 FBgn0052826 FBgn0052826 FBtr0070001 tRNA:CR32826 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7772 chr3L 12401834 12401888 + 27 NA promoter-TSS (FBgn0052103) protein_coding-promoter-TSS (FBgn0052103) 6081 FBgn0052103 FBgn0052103 FBtr0332089 CG32103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7595 chr3L 10707285 10707466 + 27 NA Intergenic Intergenic -17398 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12848 chr3RHet 789696 789930 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4308 chr2R 4639688 4639749 + 27 NA intron (FBgn0027585, intron 1 of 7) protein_coding-intron (FBgn0027585, intron 1 of 7) 14843 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13174 chrU 1586719 1586807 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5450 chr2R 13935472 13935532 + 27 NA promoter-TSS (FBgn0034292) protein_coding-promoter-TSS (FBgn0034292) -115 FBgn0054005 FBgn0054005 FBtr0300216 CG34005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2083 chr2L 14781399 14781459 + 27 NA TTS (FBgn0028867) pseudogene-TTS (FBgn0028867) 1681 FBgn0028867 FBgn0028867 FBtr0100604 CR15280 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4007 chr2R 1613307 1613369 + 27 NA exon (FBgn0000099, exon 1 of 8) protein_coding-exon (FBgn0000099, exon 1 of 8) -8784 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4460 chr2R 5640884 5640938 + 27 NA promoter-TSS (FBgn0005614) protein_coding-promoter-TSS (FBgn0005614) -291 FBgn0005614 FBgn0005614 FBtr0088473 trpl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4721 chr2R 7679184 7679238 + 27 NA intron (FBgn0033652, intron 1 of 3) protein_coding-intron (FBgn0033652, intron 1 of 3) 1337 FBgn0033652 FBgn0033652 FBtr0088030 ths protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5524 chr2R 14638321 14638475 + 27 NA exon (FBgn0053147, exon 7 of 9) protein_coding-exon (FBgn0053147, exon 7 of 9) -4102 FBgn0034387 FBgn0034387 FBtr0086609 Cyp12b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6843 chr3L 1536819 1536891 + 27 NA promoter-TSS (FBgn0035229) protein_coding-promoter-TSS (FBgn0035229) -20 FBgn0035228 FBgn0035228 FBtr0072831 CG12091 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8123 chr3L 15189522 15189595 + 27 NA Intergenic Intergenic -11386 FBgn0036490 FBgn0036490 FBtr0075644 CG6888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12080 chr3R 24173780 24173845 + 27 NA Intergenic Intergenic -4152 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1225 chr2L 8840251 8840305 + 27 NA Intergenic Intergenic 14653 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13399 chrUextra 25314387 25314550 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2578 chr2L 17010758 17010812 + 27 NA TTS (FBgn0032624) protein_coding-TTS (FBgn0032624) 2269 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12481 chr3R 25789712 25790012 + 27 NA intron (FBgn0004622, intron 1 of 9) protein_coding-intron (FBgn0004622, intron 1 of 9) 5307 FBgn0004622 FBgn0004622 FBtr0330298 Takr99D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1402 chr2L 9989933 9990031 + 27 NA intron (FBgn0000180, intron 3 of 4) protein_coding-intron (FBgn0000180, intron 3 of 4) -5239 FBgn0040965 FBgn0040965 FBtr0079974 CG13130 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_750 chr2L 5403573 5403931 + 27 NA promoter-TSS (FBgn0016660) protein_coding-promoter-TSS (FBgn0016660) -590 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8547 chr3L 19093411 19093490 + 27 NA promoter-TSS (FBgn0036850) protein_coding-promoter-TSS (FBgn0036850) 13 FBgn0036850 FBgn0036850 FBtr0075032 Gem2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8286 chr3L 16723884 16724007 + 27 NA promoter-TSS (FBgn0004556) protein_coding-promoter-TSS (FBgn0004556) -27 FBgn0004556 FBgn0004556 FBtr0075347 Dbp73D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11119 chr3R 16477106 16477161 + 27 NA exon (FBgn0028422, exon 4 of 14) protein_coding-exon (FBgn0028422, exon 4 of 14) 1039 FBgn0028422 FBgn0028422 FBtr0083938 KaiRIA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2647 chr2L 17264526 17264705 + 27 NA Intergenic Intergenic -3883 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3608 chr2L 22078766 22078820 + 27 NA promoter-TSS (FBgn0032971) protein_coding-promoter-TSS (FBgn0032971) -879 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4172 chr2R 3427505 3427565 + 27 NA promoter-TSS (FBgn0033191) protein_coding-promoter-TSS (FBgn0033191) -334 FBgn0033191 FBgn0033191 FBtr0088955 CG1598 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2834 chr2L 18074707 18074968 + 27 NA Intergenic Intergenic -3432 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4980 chr2R 9654482 9654618 + 27 NA Intergenic Intergenic -2870 FBgn0033867 FBgn0033867 FBtr0087629 Cpr50Ca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9046 chr3R 1238246 1238304 + 27 NA promoter-TSS (FBgn0037324) protein_coding-promoter-TSS (FBgn0037324) -147 FBgn0037324 FBgn0037324 FBtr0078794 Orco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12006 chr3R 23918018 23918073 + 27 NA Intergenic Intergenic -54557 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1822 chr2L 13667934 13668220 + 27 NA exon (FBgn0028527, exon 2 of 5) protein_coding-exon (FBgn0028527, exon 2 of 5) 2552 FBgn0028527 FBgn0028527 FBtr0080527 CG18507 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7435 chr3L 8734251 8734436 + 27 NA intron (FBgn0003149, intron 4 of 8) protein_coding-intron (FBgn0003149, intron 4 of 8) -2336 FBgn0003149 FBgn0003149 FBtr0306639 Prm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_889 chr2L 6498565 6498657 + 27 NA promoter-TSS (FBgn0051637) protein_coding-promoter-TSS (FBgn0051637) -31 FBgn0051637 FBgn0051637 FBtr0079287 CG31637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13635 chrX 9672648 9672727 + 27 NA promoter-TSS (FBgn0030151) protein_coding-promoter-TSS (FBgn0030151) -1533 FBgn0030151 FBgn0030151 FBtr0089386 CG1354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2318 chr2L 15631289 15631381 + 27 NA exon (FBgn0028518, exon 3 of 4) protein_coding-exon (FBgn0028518, exon 3 of 4) 1251 FBgn0028518 FBgn0028518 FBtr0080755 CG18480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13231 chrU 2656529 2656905 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4841 chr2R 8620075 8620263 + 27 NA intron (FBgn0261545, intron 2 of 8) protein_coding-intron (FBgn0261545, intron 2 of 7) 20272 FBgn0033773 FBgn0033773 FBtr0087865 mos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5387 chr2R 13357054 13357141 + 27 NA promoter-TSS (FBgn0022987) protein_coding-promoter-TSS (FBgn0022987) -32 FBgn0022987 FBgn0022987 FBtr0086925 qkr54B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10471 chr3R 12279528 12279589 + 27 NA promoter-TSS (FBgn0044826) protein_coding-promoter-TSS (FBgn0044826) -8 FBgn0044826 FBgn0044826 FBtr0083312 Pak3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12718 chr3R 27299058 27299265 + 27 NA Intergenic Intergenic 10094 FBgn0039850 FBgn0039850 FBtr0085789 CG11333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_982 chr2L 7301582 7301731 + 27 NA Intergenic Intergenic -5505 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5957 chr2R 18223197 18223252 + 27 NA exon (FBgn0034720, exon 12 of 14) protein_coding-exon (FBgn0034720, exon 12 of 14) 2593 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_310 chr2L 1601188 1601242 + 27 NA exon (FBgn0261509, exon 4 of 11) protein_coding-exon (FBgn0261509, exon 4 of 11) 9910 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9579 chr3R 5142374 5142642 + 27 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -4984 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8283 chr3L 16603504 16603560 + 27 NA promoter-TSS (FBgn0002284) protein_coding-promoter-TSS (FBgn0002284) -14 FBgn0002284 FBgn0002284 FBtr0075360 Pros26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13788 chrX 17670254 17670308 + 27 NA exon (FBgn0024184, exon 2 of 4) protein_coding-exon (FBgn0024184, exon 2 of 4) 6865 FBgn0024184 FBgn0024184 FBtr0074460 unc-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_43 chr2L 594866 595278 + 27 NA promoter-TSS (FBgn0010323) protein_coding-promoter-TSS (FBgn0010323) -262 FBgn0010323 FBgn0010323 FBtr0078072 Gsc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7059 chr3L 4741212 4741267 + 27 NA intron (FBgn0035574, intron 3 of 9) protein_coding-intron (FBgn0035574, intron 3 of 10) 5393 FBgn0264474 FBgn0264474 FBtr0332743 CR43882 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13526 chrX 4178264 4178319 + 27 NA Intergenic Intergenic -6297 FBgn0040905 FBgn0040905 FBtr0070659 CG15578 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7965 chr3L 13771321 13771425 + 27 NA exon (FBgn0264001, exon 4 of 14) protein_coding-exon (FBgn0264001, exon 4 of 14) 25127 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2862 chr2L 18228983 18229037 + 27 NA intron (FBgn0261804, intron 3 of 14) protein_coding-intron (FBgn0261804, intron 3 of 14) -19773 FBgn0051802 FBgn0051802 FBtr0081058 CG31802 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3860 chr2L 22971449 22971516 + 27 NA Intergenic Intergenic 9745 FBgn0262887 FBgn0262887 FBtr0306299 CR43242 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2471 chr2L 16469071 16469215 + 27 NA exon (FBgn0005677, exon 8 of 11) protein_coding-exon (FBgn0005677, exon 8 of 11) 16841 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10236 chr3R 10692170 10692224 + 27 NA Intergenic Intergenic -6637 FBgn0038267 FBgn0038267 FBtr0083012 CG17304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_715 chr2L 5029215 5029466 + 27 NA promoter-TSS (FBgn0000299) protein_coding-promoter-TSS (FBgn0000299) -269 FBgn0000299 FBgn0000299 FBtr0079001 Cg25C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4548 chr2R 6245153 6245309 + 27 NA promoter-TSS (FBgn0261686) protein_coding-promoter-TSS (FBgn0261686) -926 FBgn0261686 FBgn0261686 FBtr0303086 CG42733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_304 chr2L 1577699 1577753 + 27 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 9429 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9067 chr3R 1353350 1353445 + 27 NA promoter-TSS (FBgn0010051) protein_coding-promoter-TSS (FBgn0010051) 96 FBgn0010051 FBgn0010051 FBtr0078687 Itp-r83A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8026 chr3L 14194290 14194344 + 27 NA intron (FBgn0013718, intron 4 of 10) protein_coding-intron (FBgn0013718, intron 4 of 9) -2106 FBgn0052141 FBgn0052141 FBtr0075735 CG32141 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7147 chr3L 6080616 6080672 + 27 NA exon (FBgn0035677, exon 3 of 9) protein_coding-exon (FBgn0035677, exon 3 of 9) 4661 FBgn0035677 FBgn0035677 FBtr0332064 CG13293 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13457 chrX 1474718 1474926 + 27 NA intron (FBgn0000210, intron 1 of 7) protein_coding-intron (FBgn0025390, intron 3 of 7) -22389 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11720 chr3R 22597201 22597269 + 27 NA Intergenic Intergenic 12695 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_853 chr2L 6136881 6137065 + 27 NA Intergenic Intergenic -2488 FBgn0031785 FBgn0031785 FBtr0079202 CG13991 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12245 chr3R 24808802 24808861 + 27 NA Intergenic Intergenic -12755 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10266 chr3R 10977392 10977451 + 27 NA Intergenic Intergenic -4592 FBgn0038293 FBgn0038293 FBtr0083037 CG6904 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4819 chr2R 8318590 8318655 + 27 NA promoter-TSS (FBgn0033737) protein_coding-promoter-TSS (FBgn0033737) -22 FBgn0033737 FBgn0033737 FBtr0087952 Nup54 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5596 chr2R 15324746 15324800 + 27 NA promoter-TSS (FBgn0040273) protein_coding-promoter-TSS (FBgn0040273) 1 FBgn0020440 FBgn0020440 FBtr0086544 Fak56D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7567 chr3L 10592479 10592699 + 27 NA Intergenic Intergenic 24087 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3442 chr2L 21729681 21729743 + 27 NA TTS (FBgn0051619) protein_coding-TTS (FBgn0051619) 27754 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9919 chr3R 8112740 8112856 + 27 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) 5924 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5141 chr2R 11015828 11015915 + 27 NA promoter-TSS (FBgn0015371) protein_coding-promoter-TSS (FBgn0015371) 13109 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6556 chr2RHet 1931872 1931962 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1718 chr2L 12815060 12815133 + 27 NA Intergenic Intergenic -6756 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9051 chr3R 1259326 1259477 + 27 NA intron (FBgn0037326, intron 2 of 7) protein_coding-intron (FBgn0037326, intron 2 of 7) -6422 FBgn0037325 FBgn0037325 FBtr0078793 CG12147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6178 chr2R 20209557 20209616 + 27 NA Intergenic Intergenic 12243 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12426 chr3R 25533998 25534639 + 27 NA Intergenic Intergenic -5943 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6200 chr2R 20303418 20303472 + 27 NA TTS (FBgn0035002) protein_coding-TTS (FBgn0035002) 4031 FBgn0035002 FBgn0035002 FBtr0072291 CG3419 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8842 chr3LHet 13012 13078 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12017 chr3R 23955096 23955298 + 27 NA Intergenic Intergenic -17405 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13267 chrU 6110941 6111001 + 27 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5521 chr2R 14575587 14575645 + 27 NA promoter-TSS (FBgn0262103) protein_coding-promoter-TSS (FBgn0262103) -21 FBgn0262103 FBgn0262103 FBtr0304024 Sik3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12642 chr3R 26978358 26978426 + 27 NA intron (FBgn0013973, intron 8 of 16) protein_coding-intron (FBgn0013973, intron 8 of 16) 16433 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5136 chr2R 10981274 10981356 + 27 NA Intergenic Intergenic -21447 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5005 chr2R 9821950 9822111 + 27 NA intron (FBgn0013733, intron 1 of 31) protein_coding-intron (FBgn0013733, intron 1 of 30) 8852 FBgn0033885 FBgn0033885 FBtr0087615 DJ-1alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4763 chr2R 7851949 7852008 + 27 NA exon (FBgn0033668, exon 9 of 9) protein_coding-exon (FBgn0033668, exon 9 of 9) 4375 FBgn0033669 FBgn0033669 FBtr0088053 PI31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8947 chr3R 204530 204597 + 27 NA promoter-TSS (FBgn0037239) protein_coding-promoter-TSS (FBgn0037239) -466 FBgn0037239 FBgn0037239 FBtr0078916 CG11739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1770 chr2L 13137138 13137199 + 27 NA Intergenic Intergenic 5734 FBgn0032472 FBgn0032472 FBtr0080496 CG9928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9043 chr3R 1227354 1227409 + 27 NA exon (FBgn0037323, exon 2 of 3) protein_coding-exon (FBgn0037323, exon 2 of 3) -2463 FBgn0037322 FBgn0037322 FBtr0078797 Or83a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1584 chr2L 11817438 11817516 + 27 NA exon (FBgn0259225, exon 9 of 10) protein_coding-exon (FBgn0259225, exon 9 of 10) -3697 FBgn0032378 FBgn0032378 FBtr0080259 CycY protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2784 chr2L 17918892 17918951 + 27 NA exon (FBgn0262963, exon 2 of 2) ncRNA-exon (FBgn0262963, exon 2 of 2) 210 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5153 chr2R 11114083 11114143 + 27 NA intron (FBgn0259878, intron 7 of 8) protein_coding-intron (FBgn0259878, intron 7 of 8) -6196 FBgn0001187 FBgn0001187 FBtr0087399 Hex-C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3402 chr2L 21394050 21394104 + 27 NA TTS (FBgn0032946) protein_coding-TTS (FBgn0032946) -10038 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3605 chr2L 22075925 22076023 + 27 NA Intergenic Intergenic -3698 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9207 chr3R 2521720 2521778 + 27 NA exon (FBgn0004781, exon 2 of 2) protein_coding-exon (FBgn0004781, exon 2 of 2) 244 FBgn0004781 FBgn0004781 FBtr0081693 Ccp84Ac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11464 chr3R 21381582 21381636 + 27 NA intron (FBgn0011666, intron 2 of 4) protein_coding-intron (FBgn0011666, intron 2 of 6) -20391 FBgn0011666 FBgn0011666 FBtr0084882 msi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9594 chr3R 5208284 5208359 + 27 NA intron (FBgn0000723, intron 3 of 13) protein_coding-intron (FBgn0000723, intron 3 of 12) 11947 FBgn0000723 FBgn0000723 FBtr0082054 Fps85D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12132 chr3R 24378185 24378300 + 27 NA Intergenic Intergenic -7718 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_169 chr2L 1108328 1108407 + 27 NA promoter-TSS (FBgn0031301) protein_coding-promoter-TSS (FBgn0031301) 6 FBgn0261938 FBgn0261938 FBtr0077989 mtRNApol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7608 chr3L 10733170 10733463 + 27 NA Intergenic Intergenic -31776 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3995 chr2R 1351641 1351896 + 27 NA Intergenic Intergenic 31573 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1742 chr2L 12931723 12931936 + 27 NA Intergenic Intergenic 6218 FBgn0040506 FBgn0040506 FBtr0310556 ACXE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5356 chr2R 13095163 13095221 + 27 NA Intergenic Intergenic 2479 FBgn0262882 FBgn0262882 FBtr0306290 CG43237 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8409 chr3L 17589631 17589685 + 27 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) 22767 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11415 chr3R 20185881 20185962 + 26 NA promoter-TSS (FBgn0039189) protein_coding-promoter-TSS (FBgn0039189) -73 FBgn0039189 FBgn0039189 FBtr0084628 CG18528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1812 chr2L 13486932 13486986 + 26 NA intron (FBgn0263354, intron 2 of 6) protein_coding-intron (FBgn0263354, intron 4 of 8) 25185 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10491 chr3R 12390877 12390933 + 26 NA exon (FBgn0259244, exon 10 of 17) protein_coding-exon (FBgn0259244, exon 10 of 17) -6332 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8467 chr3L 18037674 18037734 + 26 NA TTS (FBgn0259739) protein_coding-TTS (FBgn0259739) 1871 FBgn0259739 FBgn0259739 FBtr0300044 CG42393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12892 chr3RHet 2097947 2098057 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_819 chr2L 5813086 5813163 + 26 NA Intergenic Intergenic 1550 FBgn0262999 FBgn0262999 FBtr0306842 CG43307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13145 chrU 1090930 1091130 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6339 chr2RHet 409269 409377 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6501 chr2RHet 1723362 1723416 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4281 chr2R 4397170 4397224 + 26 NA intron (FBgn0050361, intron 2 of 18) protein_coding-intron (FBgn0050361, intron 2 of 18) 22602 FBgn0050361 FBgn0050361 FBtr0088756 mtt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2370 chr2L 15955464 15955518 + 26 NA intron (FBgn0028645, intron 1 of 6) protein_coding-intron (FBgn0028645, intron 1 of 6) -2367 FBgn0028856 FBgn0028856 FBtr0300614 CG18063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10018 chr3R 8889870 8890275 + 26 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 6591 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2403 chr2L 16063327 16063384 + 26 NA intron (FBgn0013433, intron 2 of 7) protein_coding-intron (FBgn0013433, intron 2 of 7) 13360 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5207 chr2R 11620832 11621034 + 26 NA intron (FBgn0050089, intron 2 of 6) protein_coding-intron (FBgn0050089, intron 2 of 6) 6030 FBgn0050089 FBgn0050089 FBtr0087285 CG30089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1167 chr2L 8751375 8751430 + 26 NA promoter-TSS (FBgn0032065) protein_coding-promoter-TSS (FBgn0032065) -903 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8306 chr3L 16835550 16835615 + 26 NA exon (FBgn0036666, exon 1 of 7) protein_coding-exon (FBgn0036666, exon 1 of 7) 188 FBgn0036666 FBgn0036666 FBtr0075329 TSG101 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8980 chr3R 659496 659617 + 26 NA Intergenic Intergenic -2537 FBgn0037284 FBgn0037284 FBtr0078873 CG14659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8293 chr3L 16742295 16742349 + 26 NA Intergenic Intergenic -6267 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6838 chr3L 1474925 1474979 + 26 NA TTS (FBgn0020248) protein_coding-TTS (FBgn0020248) 297 FBgn0003138 FBgn0003138 FBtr0072718 Ptp61F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4900 chr2R 9011552 9011606 + 26 NA exon (FBgn0033792, exon 6 of 11) protein_coding-exon (FBgn0033792, exon 6 of 11) 4980 FBgn0033793 FBgn0033793 FBtr0087780 CG3955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5386 chr2R 13323846 13324310 + 26 NA intron (FBgn0027506, intron 1 of 5) protein_coding-intron (FBgn0027506, intron 1 of 5) -4031 FBgn0034218 FBgn0034218 FBtr0086918 CG18467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10081 chr3R 9371205 9371264 + 26 NA promoter-TSS (FBgn0051337) protein_coding-promoter-TSS (FBgn0051337) -128 FBgn0051337 FBgn0051337 FBtr0082790 CG31337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10358 chr3R 11590463 11590684 + 26 NA Intergenic Intergenic 1736 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9969 chr3R 8593370 8593529 + 26 NA intron (FBgn0038084, intron 1 of 5) protein_coding-intron (FBgn0038084, intron 1 of 5) 10425 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6078 chr2R 19273317 19273375 + 26 NA promoter-TSS (FBgn0034858) protein_coding-promoter-TSS (FBgn0034858) -368 FBgn0050414 FBgn0050414 FBtr0302316 CG30414 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9412 chr3R 3883255 3883309 + 26 NA Intergenic Intergenic -1724 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11700 chr3R 22529788 22529971 + 26 NA intron (FBgn0023179, intron 1 of 11) protein_coding-intron (FBgn0023179, intron 1 of 11) 10002 FBgn0023179 FBgn0023179 FBtr0085048 amon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13143 chrU 1089521 1089872 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10812 chr3R 14442907 14442963 + 26 NA exon (FBgn0038631, exon 1 of 2) protein_coding-exon (FBgn0038631, exon 1 of 2) 298 FBgn0038631 FBgn0038631 FBtr0083694 CG7695 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4489 chr2R 5823947 5824001 + 26 NA intron (FBgn0011656, intron 1 of 9) protein_coding-intron (FBgn0011656, intron 2 of 9) 22376 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3150 chr2L 20066292 20066373 + 26 NA promoter-TSS (FBgn0045064) protein_coding-promoter-TSS (FBgn0045064) -38 FBgn0045064 FBgn0045064 FBtr0331184 bwa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8539 chr3L 19033406 19033489 + 26 NA intron (FBgn0002945, intron 1 of 3) protein_coding-intron (FBgn0002945, intron 1 of 4) 5102 FBgn0002945 FBgn0002945 FBtr0332650 nkd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_975 chr2L 7199920 7200139 + 26 NA intron (FBgn0031896, intron 1 of 4) protein_coding-intron (FBgn0031896, intron 1 of 5) 4235 FBgn0031896 FBgn0031896 FBtr0079417 CG4502 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6097 chr2R 19388384 19388438 + 26 NA TTS (FBgn0034869) protein_coding-TTS (FBgn0034869) 1237 FBgn0034869 FBgn0034869 FBtr0072056 CG13558 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6989 chr3L 3278810 3279024 + 26 NA Intergenic Intergenic -1322 FBgn0035429 FBgn0035429 FBtr0308313 CG12017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3869 chr2LHet 188186 188241 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8436 chr3L 17722696 17722754 + 26 NA promoter-TSS (FBgn0036747) protein_coding-promoter-TSS (FBgn0036747) -381 FBgn0036747 FBgn0036747 FBtr0075195 CG6052 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12915 chr4 132411 132552 + 26 NA exon (FBgn0085432, exon 12 of 12) protein_coding-exon (FBgn0085432, exon 12 of 12) 17597 FBgn0011747 FBgn0011747 FBtr0089173 Ank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3824 chr2L 22762013 22762067 + 26 NA Intergenic Intergenic 25088 FBgn0041004 FBgn0041004 FBtr0306550 CG17715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5044 chr2R 10257990 10258075 + 26 NA promoter-TSS (FBgn0050073) protein_coding-promoter-TSS (FBgn0050073) 589 FBgn0050067 FBgn0050067 FBtr0087558 Obp50a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_710 chr2L 4912106 4912184 + 26 NA intron (FBgn0041150, intron 2 of 9) protein_coding-intron (FBgn0041150, intron 3 of 10) 3351 FBgn0041150 FBgn0041150 FBtr0310622 hoe1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6701 chr3L 212638 212718 + 26 NA promoter-TSS (FBgn0035111) protein_coding-promoter-TSS (FBgn0035111) 9 FBgn0035110 FBgn0035110 FBtr0072527 thoc7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11272 chr3R 17718234 17718288 + 26 NA intron (FBgn0038917, intron 4 of 4) protein_coding-intron (FBgn0038917, intron 4 of 4) 3000 FBgn0264426 FBgn0264426 FBtr0332545 CR43844 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7892 chr3L 13280664 13280718 + 26 NA Intergenic Intergenic -3095 FBgn0264514 FBgn0264514 FBtr0333132 CR43913 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_539 chr2L 3684055 3684350 + 26 NA exon (FBgn0085369, exon 6 of 8) protein_coding-exon (FBgn0085369, exon 6 of 8) 8386 FBgn0031558 FBgn0031558 FBtr0077550 CG16704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13386 chrUextra 21967279 21967523 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2646 chr2L 17263623 17263677 + 26 NA Intergenic Intergenic -2918 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4200 chr2R 3803996 3804062 + 26 NA promoter-TSS (FBgn0015509) protein_coding-promoter-TSS (FBgn0015509) -61 FBgn0033232 FBgn0033232 FBtr0088888 CG12159 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8262 chr3L 16458499 16458556 + 26 NA intron (FBgn0053158, intron 3 of 5) protein_coding-intron (FBgn0053158, intron 3 of 5) -13469 FBgn0261799 FBgn0261799 FBtr0075409 dsx-c73A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_73 chr2L 755823 755961 + 26 NA promoter-TSS (FBgn0031275) protein_coding-promoter-TSS (FBgn0031275) 5283 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13559 chrX 5793993 5794102 + 26 NA promoter-TSS (FBgn0000042) protein_coding-promoter-TSS (FBgn0000042) -847 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10094 chr3R 9431941 9432027 + 26 NA Intergenic Intergenic 1559 FBgn0261818 FBgn0261818 FBtr0303306 CG42760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10627 chr3R 13304961 13305071 + 26 NA exon (FBgn0261046, exon 27 of 35) protein_coding-exon (FBgn0261046, exon 27 of 35) -22518 FBgn0038512 FBgn0038512 FBtr0083443 CG14330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1217 chr2L 8825121 8825692 + 26 NA promoter-TSS (FBgn0029123) protein_coding-promoter-TSS (FBgn0029123) -219 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2630 chr2L 17203089 17203163 + 26 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 21188 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5618 chr2R 15519468 15519522 + 26 NA promoter-TSS (FBgn0003435) protein_coding-promoter-TSS (FBgn0003435) -3289 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1701 chr2L 12756137 12756191 + 26 NA Intergenic Intergenic 5676 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8653 chr3L 21633974 21634058 + 26 NA promoter-TSS (FBgn0052446) protein_coding-promoter-TSS (FBgn0052446) -79 FBgn0052446 FBgn0052446 FBtr0330117 Atox1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4890 chr2R 8930327 8930382 + 26 NA Intergenic Intergenic 4439 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8654 chr3L 21646056 21646110 + 26 NA intron (FBgn0264711, intron 2 of 7) protein_coding-intron (FBgn0264711, intron 2 of 7) -5239 FBgn0264711 FBgn0264711 FBtr0333974 CG43980 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1618 chr2L 12182300 12182366 + 26 NA intron (FBgn0000114, intron 1 of 8) protein_coding-intron (FBgn0000114, intron 1 of 8) -4581 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1688 chr2L 12685087 12685157 + 26 NA exon (FBgn0004394, exon 5 of 5) protein_coding-exon (FBgn0004394, exon 5 of 5) 6516 FBgn0004394 FBgn0004394 FBtr0080393 pdm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11019 chr3R 15878052 15878106 + 26 NA intron (FBgn0040571, intron 1 of 2) protein_coding-intron (FBgn0040571, intron 1 of 2) 3736 FBgn0040571 FBgn0040571 FBtr0300810 CG17193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13483 chrX 1930569 1930639 + 26 NA promoter-TSS (FBgn0000667) protein_coding-promoter-TSS (FBgn0000667) -105 FBgn0000667 FBgn0000667 FBtr0333802 Actn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7304 chr3L 7362913 7362974 + 26 NA promoter-TSS (FBgn0082598) protein_coding-promoter-TSS (FBgn0082598) -583 FBgn0035772 FBgn0035772 FBtr0302546 Sh3beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8121 chr3L 15140675 15140768 + 26 NA intron (FBgn0036485, intron 1 of 4) protein_coding-intron (FBgn0036485, intron 1 of 4) -2885 FBgn0036485 FBgn0036485 FBtr0331831 FucTA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13425 chrUextra 28878834 28878925 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4395 chr2R 5089325 5089379 + 26 NA Intergenic Intergenic 5274 FBgn0033392 FBgn0033392 FBtr0088609 CG8027 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4495 chr2R 5868008 5868062 + 26 NA promoter-TSS (FBgn0264599) ncRNA-promoter-TSS (FBgn0264599) -946 FBgn0264599 FBgn0264599 FBtr0333552 CR43948 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3887 chr2LHet 279390 279559 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3898 chr2R 138983 139037 + 26 NA Intergenic Intergenic -8566 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2585 chr2L 17042886 17043055 + 26 NA exon (FBgn0264346, exon 1 of 1) ncRNA-exon (FBgn0264346, exon 1 of 1) 195 FBgn0264346 FBgn0264346 FBtr0332013 CR43802 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10346 chr3R 11544526 11544580 + 26 NA Intergenic Intergenic -2246 FBgn0051294 FBgn0051294 FBtr0083198 CG31294 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10092 chr3R 9428512 9428577 + 26 NA Intergenic Intergenic 4999 FBgn0261818 FBgn0261818 FBtr0303306 CG42760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11130 chr3R 16546438 16546492 + 26 NA Intergenic Intergenic -6202 FBgn0024944 FBgn0024944 FBtr0330712 Oamb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7765 chr3L 12323537 12323606 + 26 NA intron (FBgn0052105, intron 1 of 2) protein_coding-intron (FBgn0052105, intron 1 of 2) 1239 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4956 chr2R 9495795 9495949 + 26 NA TTS (FBgn0033861) protein_coding-TTS (FBgn0033861) 811 FBgn0033861 FBgn0033861 FBtr0087652 CG12464 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4854 chr2R 8700450 8700509 + 26 NA Intergenic Intergenic 6297 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7276 chr3L 7049947 7050006 + 26 NA Intergenic Intergenic -9438 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5397 chr2R 13492019 13492319 + 26 NA promoter-TSS (FBgn0050231) tRNA-promoter-TSS (FBgn0050231) -57 FBgn0050333 FBgn0050333 FBtr0086898 tRNA:CR30333 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1183 chr2L 8775544 8775610 + 26 NA exon (FBgn0032068, exon 3 of 5) protein_coding-exon (FBgn0032068, exon 3 of 5) 680 FBgn0032068 FBgn0032068 FBtr0079742 CG9466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_498 chr2L 3378223 3378279 + 26 NA exon (FBgn0016698, exon 4 of 4) protein_coding-exon (FBgn0016698, exon 4 of 4) 1249 FBgn0016698 FBgn0016698 FBtr0077589 Ptpa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13580 chrX 6992073 6992275 + 26 NA promoter-TSS (FBgn0264270) protein_coding-promoter-TSS (FBgn0264270) -105 FBgn0264270 FBgn0264270 FBtr0331261 Sxl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5179 chr2R 11373119 11373193 + 26 NA TTS (FBgn0034022) protein_coding-TTS (FBgn0034022) -2818 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12288 chr3R 25073970 25074030 + 26 NA exon (FBgn0263236, exon 2 of 7) protein_coding-exon (FBgn0263236, exon 2 of 7) 544 FBgn0263236 FBgn0263236 FBtr0085400 SP1029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6021 chr2R 18812252 18812315 + 26 NA promoter-TSS (FBgn0010660) protein_coding-promoter-TSS (FBgn0010660) -28 FBgn0010660 FBgn0010660 FBtr0071996 Nup214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5742 chr2R 16410428 16410482 + 26 NA Intergenic Intergenic -3377 FBgn0034511 FBgn0034511 FBtr0086214 CG13422 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9329 chr3R 3152505 3152559 + 26 NA Intergenic Intergenic -9603 FBgn0037498 FBgn0037498 FBtr0081591 CG10029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13669 chrX 12477095 12477391 + 26 NA promoter-TSS (FBgn0030400) protein_coding-promoter-TSS (FBgn0030400) -17 FBgn0030400 FBgn0030400 FBtr0273245 CG11138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8646 chr3L 21510213 21510285 + 26 NA promoter-TSS (FBgn0037093) protein_coding-promoter-TSS (FBgn0037093) -38 FBgn0037093 FBgn0037093 FBtr0332716 Cdk12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5151 chr2R 11103660 11103723 + 26 NA promoter-TSS (FBgn0034000) protein_coding-promoter-TSS (FBgn0034000) -25 FBgn0034000 FBgn0034000 FBtr0087366 CG11808 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8295 chr3L 16746744 16746983 + 26 NA Intergenic Intergenic -1726 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4347 chr2R 4828117 4828185 + 26 NA promoter-TSS (FBgn0033354) protein_coding-promoter-TSS (FBgn0033354) 231 FBgn0033355 FBgn0033355 FBtr0088656 CG13748 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6333 chr2RHet 373824 374352 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_78 chr2L 759352 759441 + 26 NA exon (FBgn0031275, exon 9 of 10) protein_coding-exon (FBgn0031275, exon 9 of 10) 8787 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3650 chr2L 22200620 22201385 + 26 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 13263 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9009 chr3R 844218 844286 + 26 NA Intergenic Intergenic -7499 FBgn0037292 FBgn0037292 FBtr0301312 CG2022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13007 chr4 1017158 1017301 + 26 NA exon (FBgn0019650, exon 3 of 9) protein_coding-exon (FBgn0019650, exon 3 of 9) 6878 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10333 chr3R 11439815 11439872 + 26 NA Intergenic Intergenic -21347 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6185 chr2R 20230108 20230255 + 26 NA promoter-TSS (FBgn0004101) protein_coding-promoter-TSS (FBgn0004101) -208 FBgn0004101 FBgn0004101 FBtr0072271 bs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11802 chr3R 23140187 23140243 + 26 NA exon (FBgn0039510, exon 12 of 32) protein_coding-exon (FBgn0039510, exon 12 of 32) 7832 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13254 chrU 5297437 5297491 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8330 chr3L 17076851 17076905 + 26 NA intron (FBgn0260943, intron 8 of 14) protein_coding-intron (FBgn0260943, intron 8 of 14) 28165 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13188 chrU 1951303 1951378 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6670 chr2RHet 2589471 2589747 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7322 chr3L 7549114 7549185 + 26 NA exon (FBgn0035797, exon 3 of 3) protein_coding-exon (FBgn0035797, exon 3 of 3) 3988 FBgn0035797 FBgn0035797 FBtr0290223 CG14837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3451 chr2L 21767033 21767462 + 26 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 9237 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10731 chr3R 13908458 13908640 + 26 NA TTS (FBgn0038566) protein_coding-TTS (FBgn0038566) 1706 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5541 chr2R 14789509 14789921 + 26 NA intron (FBgn0034408, intron 2 of 7) protein_coding-intron (FBgn0034408, intron 2 of 7) 2781 FBgn0086022 FBgn0086022 FBtr0114298 snoRNA:Me28S-U1130 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_10726 chr3R 13899511 13899615 + 26 NA Intergenic Intergenic -7280 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9296 chr3R 3003933 3004360 + 26 NA exon (FBgn0002306, exon 4 of 10) protein_coding-exon (FBgn0002306, exon 4 of 10) 8229 FBgn0037482 FBgn0037482 FBtr0081605 CG10055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12870 chr3RHet 1576136 1576190 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4482 chr2R 5779169 5779236 + 26 NA promoter-TSS (FBgn0050007) protein_coding-promoter-TSS (FBgn0050007) -294 FBgn0050007 FBgn0050007 FBtr0300921 CG30007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3128 chr2L 19935264 19935331 + 26 NA promoter-TSS (FBgn0263873) protein_coding-promoter-TSS (FBgn0263873) 12296 FBgn0264375 FBgn0264375 FBtr0332241 CR43827 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1636 chr2L 12349835 12350144 + 26 NA intron (FBgn0262475, intron 1 of 9) protein_coding-intron (FBgn0262475, intron 1 of 9) 1872 FBgn0262475 FBgn0262475 FBtr0304864 bru-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3353 chr2L 21206435 21206551 + 26 NA promoter-TSS (FBgn0026255) protein_coding-promoter-TSS (FBgn0026255) -27 FBgn0026255 FBgn0026255 FBtr0081476 clumsy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13314 chrUextra 477443 477561 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1390 chr2L 9861918 9861978 + 26 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 13659 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11457 chr3R 21044113 21044174 + 26 NA promoter-TSS (FBgn0051103) protein_coding-promoter-TSS (FBgn0051103) -926 FBgn0051103 FBgn0051103 FBtr0113389 CG31103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13078 chrU 141380 141650 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4380 chr2R 4954374 4954476 + 26 NA Intergenic Intergenic -2181 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8189 chr3L 15948165 15948235 + 26 NA promoter-TSS (FBgn0036545) protein_coding-promoter-TSS (FBgn0036545) 4 FBgn0036545 FBgn0036545 FBtr0273189 GXIVsPLA2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_440 chr2L 2819247 2819309 + 26 NA exon (FBgn0031464, exon 8 of 10) protein_coding-exon (FBgn0031464, exon 8 of 10) -3518 FBgn0031463 FBgn0031463 FBtr0113017 CG15400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13454 chrX 1441675 1441729 + 26 NA intron (FBgn0025390, intron 7 of 7) protein_coding-intron (FBgn0025390, intron 7 of 7) 10731 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13499 chrX 2949780 2949840 + 26 NA intron (FBgn0028369, intron 6 of 10) protein_coding-intron (FBgn0028369, intron 6 of 12) 11705 FBgn0029649 FBgn0029649 FBtr0332494 CG4116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10455 chr3R 12207487 12207554 + 26 NA intron (FBgn0003513, intron 4 of 8) protein_coding-intron (FBgn0003513, intron 4 of 7) -11265 FBgn0038423 FBgn0038423 FBtr0300678 CG10317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1266 chr2L 8897167 8897221 + 26 NA Intergenic Intergenic -1610 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10951 chr3R 15458489 15458670 + 26 NA promoter-TSS (FBgn0038720) protein_coding-promoter-TSS (FBgn0038720) -2092 FBgn0083974 FBgn0083974 FBtr0110954 CG34138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9213 chr3R 2547890 2547945 + 26 NA intron (FBgn0051481, intron 2 of 7) protein_coding-intron (FBgn0051481, intron 3 of 8) 18113 FBgn0004783 FBgn0004783 FBtr0081691 Ccp84Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13727 chrX 13716366 13716446 + 26 NA promoter-TSS (FBgn0027537) protein_coding-promoter-TSS (FBgn0027537) -453 FBgn0027537 FBgn0027537 FBtr0331714 CG11092 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5741 chr2R 16409496 16409550 + 26 NA Intergenic Intergenic -4309 FBgn0034511 FBgn0034511 FBtr0086214 CG13422 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2574 chr2L 17002366 17002432 + 26 NA Intergenic Intergenic 10655 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10848 chr3R 14725863 14725940 + 26 NA TTS (FBgn0038655) protein_coding-TTS (FBgn0038655) 756 FBgn0003248 FBgn0003248 FBtr0083697 Rh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10917 chr3R 15276981 15277035 + 26 NA intron (FBgn0051221, intron 3 of 4) protein_coding-intron (FBgn0051221, intron 3 of 4) 11780 FBgn0038708 FBgn0038708 FBtr0083769 CG6255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10571 chr3R 12791837 12791900 + 26 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -9058 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6040 chr2R 18933721 18933806 + 26 NA promoter-TSS (FBgn0003900) protein_coding-promoter-TSS (FBgn0003900) -86 FBgn0003900 FBgn0003900 FBtr0100130 twi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13840 chrX 21152169 21152376 + 26 NA promoter-TSS (FBgn0052521) protein_coding-promoter-TSS (FBgn0052521) -92 FBgn0052521 FBgn0052521 FBtr0310654 CG32521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10040 chr3R 9064696 9064774 + 26 NA intron (FBgn0000024, intron 6 of 10) protein_coding-intron (FBgn0000024, intron 5 of 9) -18435 FBgn0038127 FBgn0038127 FBtr0082781 CG8476 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9681 chr3R 6263515 6263645 + 26 NA Intergenic Intergenic 3069 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2819 chr2L 18014673 18014727 + 26 NA intron (FBgn0243486, intron 1 of 14) protein_coding-intron (FBgn0243486, intron 1 of 14) 2293 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4225 chr2R 3926487 3926644 + 26 NA intron (FBgn0025360, intron 3 of 3) protein_coding-intron (FBgn0025360, intron 3 of 3) 7776 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2253 chr2L 15437120 15437181 + 26 NA Intergenic Intergenic 3788 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10284 chr3R 11218054 11218304 + 26 NA exon (FBgn0262483, exon 11 of 14) protein_coding-exon (FBgn0262483, exon 11 of 14) -9506 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8086 chr3L 14835740 14835951 + 26 NA intron (FBgn0036454, intron 3 of 7) protein_coding-intron (FBgn0036454, intron 3 of 18) 37493 FBgn0036454 FBgn0036454 FBtr0110825 CG17839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1669 chr2L 12617636 12618469 + 26 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -296 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7358 chr3L 8007265 8007328 + 26 NA intron (FBgn0011817, intron 3 of 8) protein_coding-intron (FBgn0011817, intron 3 of 9) 14422 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13290 chrUextra 160131 160202 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2773 chr2L 17853488 17853596 + 26 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 2 of 14) 21705 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6240 chr2R 20681008 20681072 + 26 NA promoter-TSS (FBgn0015801) protein_coding-promoter-TSS (FBgn0015801) -111 FBgn0015801 FBgn0015801 FBtr0305671 Reg-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2041 chr2L 14624999 14625053 + 26 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 8757 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8039 chr3L 14335598 14335652 + 26 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) 13179 FBgn0036419 FBgn0036419 FBtr0075744 CG13482 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1685 chr2L 12673038 12673524 + 26 NA exon (FBgn0004394, exon 3 of 5) protein_coding-exon (FBgn0004394, exon 3 of 5) -3567 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10826 chr3R 14510176 14510230 + 26 NA exon (FBgn0038641, exon 6 of 6) protein_coding-exon (FBgn0038641, exon 6 of 6) 3344 FBgn0038641 FBgn0038641 FBtr0083669 CG7708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8551 chr3L 19133540 19133707 + 26 NA TTS (FBgn0016797) protein_coding-TTS (FBgn0016797) -1548 FBgn0036851 FBgn0036851 FBtr0330092 CG14082 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12571 chr3R 26714790 26714844 + 26 NA promoter-TSS (FBgn0000416) protein_coding-promoter-TSS (FBgn0000416) -269 FBgn0000416 FBgn0000416 FBtr0085714 Sap-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6143 chr2R 19760483 19760540 + 26 NA intron (FBgn0011236, intron 1 of 2) protein_coding-intron (FBgn0011236, intron 1 of 2) 2715 FBgn0011236 FBgn0011236 FBtr0072129 ken protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4547 chr2R 6244113 6244203 + 26 NA promoter-TSS (FBgn0033512) protein_coding-promoter-TSS (FBgn0033512) 147 FBgn0261686 FBgn0261686 FBtr0303086 CG42733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9038 chr3R 1183886 1183948 + 26 NA promoter-TSS (FBgn0250746) protein_coding-promoter-TSS (FBgn0250746) -22 FBgn0250746 FBgn0250746 FBtr0078806 Prosbeta7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5634 chr2R 15614625 15615053 + 26 NA promoter-TSS (FBgn0065076) snoRNA-promoter-TSS (FBgn0065076) -182 FBgn0065076 FBgn0065076 FBtr0091934 snoRNA:185 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3945 chr2R 820899 821025 + 26 NA Intergenic Intergenic -16210 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12925 chr4 527502 527597 + 26 NA intron (FBgn0004607, intron 2 of 12) protein_coding-intron (FBgn0004607, intron 2 of 13) 5113 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5441 chr2R 13878847 13878917 + 26 NA intron (FBgn0034286, intron 1 of 6) protein_coding-intron (FBgn0034286, intron 1 of 6) 16488 FBgn0034286 FBgn0034286 FBtr0300215 dpr13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6377 chr2RHet 578456 578706 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8893 chr3LHet 1270318 1270686 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6826 chr3L 1390594 1390649 + 26 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -7074 FBgn0011851 FBgn0011851 FBtr0072685 tRNA:E4:62Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_1317 chr2L 9091978 9092038 + 26 NA Intergenic Intergenic -5619 FBgn0051609 FBgn0051609 FBtr0299873 CG31609 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12374 chr3R 25452540 25452597 + 26 NA Intergenic Intergenic 7812 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6173 chr2R 20178815 20178873 + 26 NA TTS (FBgn0005636) protein_coding-TTS (FBgn0005636) -2974 FBgn0263546 FBgn0263546 FBtr0309662 mir-4985 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10532 chr3R 12624287 12624662 + 26 NA Intergenic Intergenic 10441 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9363 chr3R 3450636 3450695 + 26 NA intron (FBgn0083963, intron 1 of 12) protein_coding-intron (FBgn0083963, intron 1 of 12) 14491 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11398 chr3R 19748737 19748823 + 26 NA promoter-TSS (FBgn0051141) protein_coding-promoter-TSS (FBgn0051141) -85 FBgn0016754 FBgn0016754 FBtr0330380 sba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2459 chr2L 16386599 16386655 + 26 NA Intergenic Intergenic 20708 FBgn0028841 FBgn0028841 FBtr0080859 jhamt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13759 chrX 15891001 15891090 + 26 NA promoter-TSS (FBgn0030720) protein_coding-promoter-TSS (FBgn0030720) -4 FBgn0030720 FBgn0030720 FBtr0074138 CG8939 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6650 chr2RHet 2351819 2351874 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13394 chrUextra 23632643 23632705 + 26 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9959 chr3R 8485235 8485431 + 25 NA exon (FBgn0038072, exon 6 of 8) protein_coding-exon (FBgn0038072, exon 6 of 8) -3220 FBgn0038073 FBgn0038073 FBtr0300770 CG14395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3895 chr2R 71878 71932 + 25 NA Intergenic Intergenic 3756 FBgn0262116 FBgn0262116 FBtr0111266 CG40127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13263 chrU 5859695 5859749 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9858 chr3R 7653350 7653404 + 25 NA intron (FBgn0037956, intron 3 of 3) protein_coding-intron (FBgn0037956, intron 2 of 2) -5422 FBgn0037955 FBgn0037955 FBtr0082521 CG6950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3647 chr2L 22198369 22198509 + 25 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 15826 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3968 chr2R 857255 857317 + 25 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 20114 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12290 chr3R 25093858 25094139 + 25 NA Intergenic Intergenic -12496 FBgn0003525 FBgn0003525 FBtr0085397 stg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11576 chr3R 22091560 22091614 + 25 NA intron (FBgn0039420, intron 1 of 7) protein_coding-intron (FBgn0039420, intron 1 of 7) 3203 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3888 chr2LHet 285557 285620 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2220 chr2L 15319133 15319248 + 25 NA promoter-TSS (FBgn0041103) protein_coding-promoter-TSS (FBgn0041103) -289 FBgn0041103 FBgn0041103 FBtr0300021 nht protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6045 chr2R 18959523 18959644 + 25 NA promoter-TSS (FBgn0050202) tRNA-promoter-TSS (FBgn0050202) 40 FBgn0050201 FBgn0050201 FBtr0071983 tRNA:CR30201 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8566 chr3L 19635891 19635980 + 25 NA promoter-TSS (FBgn0036897) protein_coding-promoter-TSS (FBgn0036897) -19 FBgn0036897 FBgn0036897 FBtr0306354 CG8786 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13694 chrX 12878817 12878871 + 25 NA exon (FBgn0052643, exon 1 of 1) protein_coding-exon (FBgn0052643, exon 1 of 1) 254 FBgn0052643 FBgn0052643 FBtr0073716 CG32643 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12140 chr3R 24399798 24399856 + 25 NA Intergenic Intergenic 11007 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4364 chr2R 4909544 4909770 + 25 NA exon (FBgn0033365, exon 3 of 9) protein_coding-exon (FBgn0033365, exon 3 of 9) 4297 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12475 chr3R 25745127 25745195 + 25 NA exon (FBgn0003861, exon 3 of 14) protein_coding-exon (FBgn0003861, exon 3 of 14) 850 FBgn0003861 FBgn0003861 FBtr0331356 trp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7833 chr3L 12779051 12779111 + 25 NA exon (FBgn0260945, exon 9 of 12) protein_coding-exon (FBgn0260945, exon 9 of 12) 2677 FBgn0036311 FBgn0036311 FBtr0075924 CG17666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8812 chr3L 24052690 24052747 + 25 NA Intergenic Intergenic -14611 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7872 chr3L 13110156 13110222 + 25 NA exon (FBgn0010452, exon 2 of 2) protein_coding-exon (FBgn0010452, exon 2 of 2) 2818 FBgn0010452 FBgn0010452 FBtr0330075 trn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7402 chr3L 8384695 8384952 + 25 NA TTS (FBgn0001253) protein_coding-TTS (FBgn0001253) 183 FBgn0035886 FBgn0035886 FBtr0076608 Jon66Ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13823 chrX 19047378 19047576 + 25 NA promoter-TSS (FBgn0261461) protein_coding-promoter-TSS (FBgn0261461) -6700 FBgn0261461 FBgn0261461 FBtr0299625 RhoGAP18B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9892 chr3R 7978075 7978136 + 25 NA intron (FBgn0037993, intron 2 of 6) protein_coding-intron (FBgn0037993, intron 2 of 6) 6212 FBgn0037993 FBgn0037993 FBtr0082549 dpr15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5796 chr2R 16987839 16987905 + 25 NA exon (FBgn0085425, exon 4 of 4) protein_coding-exon (FBgn0085425, exon 4 of 4) -1563 FBgn0015721 FBgn0015721 FBtr0089599 king-tubby protein_coding Nup98-S2-pascual-garcia2017_R1_peak_356 chr2L 2009116 2009187 + 25 NA promoter-TSS (FBgn0051943) tRNA-promoter-TSS (FBgn0051943) -4 FBgn0051943 FBgn0051943 FBtr0077818 tRNA:CR31943 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3575 chr2L 22023566 22023785 + 25 NA exon (FBgn0028979, exon 3 of 3) protein_coding-exon (FBgn0028979, exon 3 of 3) 3640 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6493 chr2RHet 1707499 1707695 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5121 chr2R 10871824 10871939 + 25 NA promoter-TSS (FBgn0050241) tRNA-promoter-TSS (FBgn0050241) 32 FBgn0050241 FBgn0050241 FBtr0087425 tRNA:CR30241 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4257 chr2R 4235003 4235228 + 25 NA exon (FBgn0261588, exon 2 of 11) protein_coding-exon (FBgn0261588, exon 2 of 11) -10928 FBgn0033283 FBgn0033283 FBtr0088739 CG11635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8916 chr3LHet 2024686 2024740 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8807 chr3L 23965764 23965819 + 25 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 13719 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13466 chrX 1598909 1598965 + 25 NA Intergenic Intergenic 5259 FBgn0025378 FBgn0025378 FBtr0070278 CG3795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9968 chr3R 8582943 8583034 + 25 NA intron (FBgn0038084, intron 1 of 5) protein_coding-intron (FBgn0038084, intron 1 of 5) -13586 FBgn0038083 FBgn0038083 FBtr0302379 CG5999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13671 chrX 12610088 12610310 + 25 NA intron (FBgn0263865, intron 3 of 10) protein_coding-intron (FBgn0263865, intron 2 of 9) 2294 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9980 chr3R 8641332 8641407 + 25 NA intron (FBgn0051345, intron 1 of 4) protein_coding-intron (FBgn0051345, intron 1 of 4) 1382 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10287 chr3R 11228386 11228444 + 25 NA TTS (FBgn0038337) protein_coding-TTS (FBgn0038337) 2812 FBgn0038337 FBgn0038337 FBtr0083106 CG6125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9377 chr3R 3579423 3579527 + 25 NA Intergenic Intergenic -3677 FBgn0037513 FBgn0037513 FBtr0081780 pyd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2728 chr2L 17701077 17701133 + 25 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -3576 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5719 chr2R 16227118 16227236 + 25 NA Intergenic Intergenic -2356 FBgn0034505 FBgn0034505 FBtr0086286 CG16739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_207 chr2L 1323990 1324055 + 25 NA Intergenic Intergenic -5139 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6618 chr2RHet 2237219 2237273 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6644 chr2RHet 2313894 2314034 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5584 chr2R 15149483 15149560 + 25 NA exon (FBgn0034423, exon 2 of 2) protein_coding-exon (FBgn0034423, exon 2 of 2) 2107 FBgn0034423 FBgn0034423 FBtr0086511 CG7229 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_20 chr2L 305906 305969 + 25 NA promoter-TSS (FBgn0004611) protein_coding-promoter-TSS (FBgn0004611) 3411 FBgn0263872 FBgn0263872 FBtr0329830 CR43719 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13098 chrU 211035 211751 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9628 chr3R 5737516 5737603 + 25 NA intron (FBgn0263097, intron 1 of 6) protein_coding-intron (FBgn0263097, intron 1 of 6) 37156 FBgn0263097 FBgn0263097 FBtr0114583 Glut4EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1691 chr2L 12721849 12721906 + 25 NA promoter-TSS (FBgn0032455) protein_coding-promoter-TSS (FBgn0032455) -34 FBgn0032455 FBgn0032455 FBtr0301163 CG5792 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4921 chr2R 9210515 9210569 + 25 NA Intergenic Intergenic 6404 FBgn0262391 FBgn0262391 FBtr0304273 mir-184 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4398 chr2R 5172555 5172609 + 25 NA promoter-TSS (FBgn0020621) protein_coding-promoter-TSS (FBgn0020621) 20 FBgn0020621 FBgn0020621 FBtr0302603 Pkn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4168 chr2R 3361605 3361665 + 25 NA promoter-TSS (FBgn0010548) protein_coding-promoter-TSS (FBgn0010548) 527 FBgn0010548 FBgn0010548 FBtr0310676 Aldh-III protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11292 chr3R 18088520 18088667 + 25 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -30055 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6175 chr2R 20182785 20182848 + 25 NA promoter-TSS (FBgn0034999) protein_coding-promoter-TSS (FBgn0034999) -225 FBgn0034999 FBgn0034999 FBtr0072269 CG3394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5779 chr2R 16810854 16811050 + 25 NA exon (FBgn0020617, exon 3 of 6) protein_coding-exon (FBgn0020617, exon 3 of 6) 6667 FBgn0020617 FBgn0020617 FBtr0071518 Rx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9516 chr3R 4688596 4688744 + 25 NA promoter-TSS (FBgn0053551) tRNA-promoter-TSS (FBgn0053551) 15 FBgn0053551 FBgn0053551 FBtr0091521 tRNA:R:85Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_9529 chr3R 4790389 4790443 + 25 NA Intergenic Intergenic -1733 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7600 chr3L 10714759 10714813 + 25 NA Intergenic Intergenic -24809 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1550 chr2L 11517044 11517317 + 25 NA promoter-TSS (FBgn0032364) protein_coding-promoter-TSS (FBgn0032364) -145 FBgn0032363 FBgn0032363 FBtr0080247 CG6509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4969 chr2R 9585045 9585099 + 25 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) -4198 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6119 chr2R 19574957 19575026 + 25 NA promoter-TSS (FBgn0262728) protein_coding-promoter-TSS (FBgn0262728) -693 FBgn0262728 FBgn0262728 FBtr0301509 Pal2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9301 chr3R 3040372 3040426 + 25 NA exon (FBgn0037485, exon 6 of 6) protein_coding-exon (FBgn0037485, exon 6 of 6) 2406 FBgn0037485 FBgn0037485 FBtr0332538 CG14606 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3659 chr2L 22221473 22221908 + 25 NA Intergenic Intergenic -4461 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3065 chr2L 19680933 19681068 + 25 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 19968 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12745 chr3R 27470348 27470479 + 25 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) 22555 FBgn0039862 FBgn0039862 FBtr0330107 kek6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6112 chr2R 19538998 19539059 + 25 NA exon (FBgn0004795, exon 8 of 12) protein_coding-exon (FBgn0004795, exon 8 of 12) -6066 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1807 chr2L 13461453 13461555 + 25 NA promoter-TSS (FBgn0263354) protein_coding-promoter-TSS (FBgn0263354) -270 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9409 chr3R 3827267 3827321 + 25 NA promoter-TSS (FBgn0037536) protein_coding-promoter-TSS (FBgn0037536) 10 FBgn0037536 FBgn0037536 FBtr0290324 CG2698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7242 chr3L 6899972 6900026 + 25 NA Intergenic Intergenic 7065 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6336 chr2RHet 401156 401394 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13612 chrX 8556236 8556290 + 25 NA Intergenic Intergenic -11549 FBgn0004102 FBgn0004102 FBtr0331305 oc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1897 chr2L 14169130 14169220 + 25 NA intron (FBgn0263038, intron 1 of 5) protein_coding-intron (FBgn0263038, intron 1 of 5) -5953 FBgn0263037 FBgn0263037 FBtr0306928 CG43332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10486 chr3R 12366260 12366320 + 25 NA intron (FBgn0259244, intron 2 of 15) protein_coding-intron (FBgn0259244, intron 2 of 16) -30947 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8637 chr3L 21311125 21311200 + 25 NA promoter-TSS (FBgn0003042) protein_coding-promoter-TSS (FBgn0003042) -42 FBgn0003042 FBgn0003042 FBtr0078405 Pc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4775 chr2R 7961921 7961999 + 25 NA intron (FBgn0033679, intron 2 of 6) protein_coding-intron (FBgn0033679, intron 2 of 6) 5088 FBgn0033679 FBgn0033679 FBtr0088022 CG8888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2282 chr2L 15528979 15529033 + 25 NA Intergenic Intergenic 6568 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13109 chrU 237192 237400 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10734 chr3R 13934329 13934439 + 25 NA promoter-TSS (FBgn0051242) tRNA-promoter-TSS (FBgn0051242) 25 FBgn0051242 FBgn0051242 FBtr0083544 tRNA:CR31242 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1407 chr2L 10028708 10028892 + 25 NA exon (FBgn0032176, exon 1 of 1) protein_coding-exon (FBgn0032176, exon 1 of 1) 2060 FBgn0032176 FBgn0032176 FBtr0079933 CG13127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6758 chr3L 692875 692993 + 25 NA promoter-TSS (FBgn0260862) protein_coding-promoter-TSS (FBgn0260862) -15 FBgn0260862 FBgn0260862 FBtr0072607 Vti1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5098 chr2R 10685965 10686019 + 25 NA exon (FBgn0001319, exon 1 of 11) protein_coding-exon (FBgn0001319, exon 1 of 11) -1460 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5260 chr2R 12132847 12132909 + 25 NA intron (FBgn0261612, intron 6 of 8) protein_coding-intron (FBgn0261612, intron 4 of 6) -3439 FBgn0034099 FBgn0034099 FBtr0087188 CG15708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13066 chrU 123978 124032 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3943 chr2R 819826 820029 + 25 NA Intergenic Intergenic -17245 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_245 chr2L 1406292 1406375 + 25 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 14116 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6465 chr2RHet 1414645 1414817 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4449 chr2R 5544834 5545173 + 25 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) -3727 FBgn0011921 FBgn0011921 FBtr0088465 tRNA:M3:46A tRNA Nup98-S2-pascual-garcia2017_R1_peak_4 chr2L 18894 18955 + 25 NA promoter-TSS (FBgn0002121) protein_coding-promoter-TSS (FBgn0002121) 2452 FBgn0002121 FBgn0002121 FBtr0078171 l(2)gl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3821 chr2L 22744838 22744898 + 25 NA exon (FBgn0041004, exon 6 of 6) protein_coding-exon (FBgn0041004, exon 6 of 6) 7916 FBgn0041004 FBgn0041004 FBtr0306550 CG17715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1903 chr2L 14263043 14263113 + 25 NA promoter-TSS (FBgn0261563) protein_coding-promoter-TSS (FBgn0261563) 51 FBgn0261563 FBgn0261563 FBtr0302735 wb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12714 chr3R 27279620 27279702 + 25 NA exon (FBgn0261988, exon 6 of 13) protein_coding-exon (FBgn0261988, exon 6 of 13) 5930 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5688 chr2R 15993969 15994263 + 25 NA Intergenic Intergenic -4900 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5498 chr2R 14364081 14364490 + 25 NA exon (FBgn0028496, exon 3 of 19) protein_coding-exon (FBgn0028496, exon 3 of 19) 21211 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13199 chrU 2072019 2072099 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1161 chr2L 8741756 8741810 + 25 NA Intergenic Intergenic -1123 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10323 chr3R 11400692 11400753 + 25 NA Intergenic Intergenic -22228 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5459 chr2R 14039252 14039311 + 25 NA promoter-TSS (FBgn0000057) protein_coding-promoter-TSS (FBgn0000057) 72 FBgn0000057 FBgn0000057 FBtr0086744 adp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7428 chr3L 8666041 8666109 + 25 NA Intergenic Intergenic -2784 FBgn0001168 FBgn0001168 FBtr0076569 h protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9977 chr3R 8627587 8627677 + 25 NA Intergenic Intergenic 15119 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8055 chr3L 14475717 14475772 + 25 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) -35181 FBgn0036426 FBgn0036426 FBtr0290282 CG9592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8527 chr3L 18752444 18752607 + 25 NA intron (FBgn0001078, intron 1 of 7) protein_coding-intron (FBgn0001078, intron 3 of 9) 6319 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4897 chr2R 8993214 8993273 + 25 NA Intergenic Intergenic -10567 FBgn0033792 FBgn0033792 FBtr0087722 CG13325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_927 chr2L 6821617 6821862 + 25 NA promoter-TSS (FBgn0051632) protein_coding-promoter-TSS (FBgn0051632) -578 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6619 chr2RHet 2237509 2237911 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3220 chr2L 20498460 20498527 + 25 NA Intergenic Intergenic 3387 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3123 chr2L 19906956 19907010 + 25 NA intron (FBgn0263873, intron 2 of 13) protein_coding-intron (FBgn0263873, intron 4 of 15) 4828 FBgn0262543 FBgn0262543 FBtr0332244 CR43097 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3382 chr2L 21339990 21340046 + 25 NA exon (FBgn0023091, exon 2 of 2) protein_coding-exon (FBgn0023091, exon 2 of 2) -4589 FBgn0032943 FBgn0032943 FBtr0273404 Tsp39D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8925 chr3LHet 2264903 2264963 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12023 chr3R 23978974 23979159 + 25 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 6464 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_787 chr2L 5602898 5603233 + 25 NA exon (FBgn0031725, exon 12 of 12) protein_coding-exon (FBgn0031725, exon 12 of 12) 6232 FBgn0031724 FBgn0031724 FBtr0079109 CG18266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13183 chrU 1912471 1912527 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6268 chr2R 20949259 20949407 + 25 NA promoter-TSS (FBgn0001148) protein_coding-promoter-TSS (FBgn0001148) -169 FBgn0001148 FBgn0001148 FBtr0072444 gsb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8835 chr3L 24243646 24243727 + 25 NA intron (FBgn0011288, intron 5 of 6) protein_coding-intron (FBgn0011288, intron 5 of 7) -74281 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6311 chr2RHet 107181 107235 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11067 chr3R 16162623 16163062 + 25 NA Intergenic Intergenic -2147 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9703 chr3R 6398103 6398166 + 25 NA intron (FBgn0001235, intron 5 of 12) protein_coding-intron (FBgn0001235, intron 5 of 11) 33258 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6869 chr3L 1840952 1841053 + 25 NA exon (FBgn0035281, exon 3 of 3) protein_coding-exon (FBgn0035281, exon 3 of 3) 1082 FBgn0035281 FBgn0035281 FBtr0332673 Cpr62Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13482 chrX 1887731 1888024 + 25 NA exon (FBgn0264562, exon 7 of 12) protein_coding-exon (FBgn0264562, exon 7 of 12) 15520 FBgn0023545 FBgn0023545 FBtr0070347 CG4406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6885 chr3L 2013821 2014055 + 25 NA Intergenic Intergenic 8020 FBgn0259703 FBgn0259703 FBtr0299956 CG42357 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13126 chrU 410196 410257 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6741 chr3L 621244 621398 + 25 NA exon (FBgn0263042, exon 2 of 2) protein_coding-exon (FBgn0263042, exon 2 of 2) 995 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12632 chr3R 26945683 26945745 + 25 NA Intergenic Intergenic 3525 FBgn0261395 FBgn0261395 FBtr0085738 Prosalpha3T protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1352 chr2L 9546114 9546176 + 25 NA exon (FBgn0032127, exon 2 of 2) protein_coding-exon (FBgn0032127, exon 2 of 2) 334 FBgn0032127 FBgn0032127 FBtr0273329 CG13114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13186 chrU 1923488 1923542 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9520 chr3R 4703061 4703240 + 25 NA intron (FBgn0262614, intron 2 of 13) protein_coding-intron (FBgn0262614, intron 2 of 13) 14495 FBgn0053551 FBgn0053551 FBtr0091521 tRNA:R:85Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_4711 chr2R 7599604 7599675 + 25 NA promoter-TSS (FBgn0033649) protein_coding-promoter-TSS (FBgn0033649) -128 FBgn0033649 FBgn0033649 FBtr0113070 pyr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2623 chr2L 17191789 17191966 + 25 NA intron (FBgn0032629, intron 4 of 6) protein_coding-intron (FBgn0032629, intron 4 of 5) 9939 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1974 chr2L 14424476 14424798 + 25 NA exon (FBgn0028871, exon 2 of 2) protein_coding-exon (FBgn0028871, exon 2 of 2) 494 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5424 chr2R 13714669 13714723 + 25 NA exon (FBgn0259211, exon 4 of 15) protein_coding-exon (FBgn0259211, exon 4 of 15) 3626 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12460 chr3R 25669388 25669459 + 25 NA intron (FBgn0039709, intron 2 of 11) protein_coding-intron (FBgn0039709, intron 2 of 11) 2044 FBgn0039709 FBgn0039709 FBtr0085488 Cad99C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10015 chr3R 8868264 8868324 + 25 NA promoter-TSS (FBgn0003450) protein_coding-promoter-TSS (FBgn0003450) 198 FBgn0003450 FBgn0003450 FBtr0082716 snk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1808 chr2L 13471377 13471431 + 25 NA intron (FBgn0263354, intron 1 of 6) protein_coding-intron (FBgn0263354, intron 3 of 8) 9630 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8208 chr3L 16030356 16030499 + 25 NA TTS (FBgn0036560) protein_coding-TTS (FBgn0036560) 1649 FBgn0036560 FBgn0036560 FBtr0333614 CG5895 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_211 chr2L 1331190 1331244 + 25 NA Intergenic Intergenic 2056 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_813 chr2L 5771353 5771420 + 25 NA exon (FBgn0051912, exon 2 of 2) ncRNA-exon (FBgn0051912, exon 2 of 2) 1634 FBgn0051912 FBgn0051912 FBtr0332036 CR31912 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7591 chr3L 10701207 10701261 + 25 NA Intergenic Intergenic -11257 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12957 chr4 718185 718312 + 25 NA promoter-TSS (FBgn0005558) protein_coding-promoter-TSS (FBgn0005558) -1573 FBgn0026199 FBgn0026199 FBtr0089092 myo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_831 chr2L 5907027 5907142 + 25 NA promoter-TSS (FBgn0043362) protein_coding-promoter-TSS (FBgn0043362) -85 FBgn0043362 FBgn0043362 FBtr0079144 bchs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5439 chr2R 13861064 13861255 + 25 NA Intergenic Intergenic -17084 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7923 chr3L 13534923 13534992 + 25 NA exon (FBgn0264001, exon 8 of 13) protein_coding-exon (FBgn0264001, exon 8 of 13) -22252 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11548 chr3R 21910206 21910352 + 25 NA intron (FBgn0039411, intron 4 of 10) protein_coding-intron (FBgn0039411, intron 4 of 10) 14154 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2815 chr2L 17996795 17996889 + 25 NA Intergenic Intergenic 6424 FBgn0051742 FBgn0051742 FBtr0081025 CG31742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6629 chr2RHet 2249583 2249637 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10692 chr3R 13706915 13707121 + 25 NA exon (FBgn0053547, exon 21 of 27) protein_coding-exon (FBgn0053547, exon 21 of 27) -25168 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3328 chr2L 21035586 21035640 + 25 NA intron (FBgn0250867, intron 2 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -17420 FBgn0010395 FBgn0010395 FBtr0081461 betaInt-nu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6540 chr2RHet 1909451 1909626 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3093 chr2L 19762114 19762185 + 25 NA exon (FBgn0032820, exon 3 of 3) protein_coding-exon (FBgn0032820, exon 3 of 3) 1985 FBgn0032820 FBgn0032820 FBtr0081322 fbp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9823 chr3R 7276743 7276797 + 25 NA promoter-TSS (FBgn0051374) protein_coding-promoter-TSS (FBgn0051374) 85 FBgn0051374 FBgn0051374 FBtr0082400 sals protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13075 chrU 134650 134735 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12600 chr3R 26806783 26806874 + 25 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) 8900 FBgn0051008 FBgn0051008 FBtr0085748 CG31008 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1761 chr2L 13038839 13038923 + 25 NA intron (FBgn0262160, intron 2 of 6) protein_coding-intron (FBgn0262160, intron 2 of 6) -17574 FBgn0028965 FBgn0028965 FBtr0080427 A16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1410 chr2L 10038747 10038812 + 25 NA exon (FBgn0027600, exon 6 of 6) protein_coding-exon (FBgn0027600, exon 6 of 6) 6085 FBgn0027600 FBgn0027600 FBtr0079934 obst-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11354 chr3R 19089679 19089742 + 25 NA TTS (FBgn0004882) protein_coding-TTS (FBgn0004882) 5108 FBgn0039068 FBgn0039068 FBtr0307596 CG13827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8486 chr3L 18176452 18176515 + 25 NA intron (FBgn0003997, intron 1 of 3) protein_coding-intron (FBgn0003997, intron 1 of 3) 2258 FBgn0003997 FBgn0003997 FBtr0332862 W protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4475 chr2R 5696883 5696937 + 25 NA Intergenic Intergenic -2540 FBgn0027589 FBgn0027589 FBtr0088495 CG1688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6038 chr2R 18930705 18930883 + 25 NA promoter-TSS (FBgn0261705) protein_coding-promoter-TSS (FBgn0261705) -332 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13280 chrU 7998307 7998361 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1588 chr2L 11856614 11856744 + 25 NA intron (FBgn0259225, intron 3 of 9) protein_coding-intron (FBgn0259225, intron 3 of 9) 3249 FBgn0261805 FBgn0261805 FBtr0303281 CG42751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8308 chr3L 16847910 16848001 + 25 NA intron (FBgn0003410, intron 1 of 1) protein_coding-intron (FBgn0003410, intron 1 of 1) -1064 FBgn0003410 FBgn0003410 FBtr0075333 sina protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7821 chr3L 12683922 12684220 + 25 NA Intergenic Intergenic -2668 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7883 chr3L 13221790 13221997 + 25 NA exon (FBgn0023095, exon 1 of 5) protein_coding-exon (FBgn0023095, exon 1 of 5) 101 FBgn0023095 FBgn0023095 FBtr0305480 caps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5830 chr2R 17253052 17253243 + 25 NA intron (FBgn0000395, intron 2 of 6) protein_coding-intron (FBgn0000395, intron 2 of 6) 13820 FBgn0000395 FBgn0000395 FBtr0071610 cv-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9419 chr3R 3908034 3908156 + 25 NA exon (FBgn0037546, exon 2 of 4) protein_coding-exon (FBgn0037546, exon 2 of 4) -4879 FBgn0037547 FBgn0037547 FBtr0081790 CG7910 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12926 chr4 527866 528146 + 25 NA intron (FBgn0004607, intron 2 of 12) protein_coding-intron (FBgn0004607, intron 2 of 13) 5570 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8961 chr3R 455904 456054 + 25 NA exon (FBgn0087012, exon 6 of 7) protein_coding-exon (FBgn0087012, exon 6 of 7) 7755 FBgn0087012 FBgn0087012 FBtr0301885 5-HT2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12594 chr3R 26776665 26776756 + 25 NA Intergenic Intergenic -8819 FBgn0039812 FBgn0039812 FBtr0085731 CG15548 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6358 chr2RHet 521682 521960 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8471 chr3L 18061447 18061518 + 25 NA Intergenic Intergenic -3686 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13367 chrUextra 14206360 14206505 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_931 chr2L 6841275 6841332 + 25 NA Intergenic Intergenic -11021 FBgn0017551 FBgn0017551 FBtr0079342 Rca1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7373 chr3L 8180020 8180115 + 25 NA promoter-TSS (FBgn0035850) protein_coding-promoter-TSS (FBgn0035850) -28 FBgn0035850 FBgn0035850 FBtr0321321 Atg18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13381 chrUextra 18286400 18286469 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10131 chr3R 9699327 9699382 + 25 NA exon (FBgn0008646, exon 2 of 4) protein_coding-exon (FBgn0008646, exon 2 of 4) 1284 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2188 chr2L 15190423 15190477 + 25 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 9959 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7409 chr3L 8442923 8442994 + 25 NA promoter-TSS (FBgn0010825) protein_coding-promoter-TSS (FBgn0010825) -64 FBgn0010825 FBgn0010825 FBtr0076618 Gug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2012 chr2L 14536950 14537004 + 25 NA Intergenic Intergenic -6053 FBgn0011866 FBgn0011866 FBtr0080663 tRNA:G3:35Be tRNA Nup98-S2-pascual-garcia2017_R1_peak_2832 chr2L 18073095 18073149 + 25 NA Intergenic Intergenic -5147 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8413 chr3L 17598151 17598205 + 25 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 14247 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5647 chr2R 15714092 15714149 + 25 NA promoter-TSS (FBgn0034476) protein_coding-promoter-TSS (FBgn0034476) -290 FBgn0034476 FBgn0034476 FBtr0086336 Toll-7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12470 chr3R 25739287 25739343 + 25 NA TTS (FBgn0051036) protein_coding-TTS (FBgn0051036) 753 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6254 chr2R 20751097 20751171 + 25 NA Intergenic Intergenic -6456 FBgn0050420 FBgn0050420 FBtr0072382 Atf-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11051 chr3R 16015991 16016185 + 25 NA Intergenic Intergenic -14443 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2440 chr2L 16221249 16221596 + 25 NA Intergenic Intergenic -4378 FBgn0264392 FBgn0264392 FBtr0332359 CR43840 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5034 chr2R 10191354 10191418 + 25 NA Intergenic Intergenic -1528 FBgn0033921 FBgn0033921 FBtr0087562 tej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9331 chr3R 3160389 3160448 + 25 NA Intergenic Intergenic -10373 FBgn0051496 FBgn0051496 FBtr0081582 CG31496 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8713 chr3L 22953379 22953436 + 25 NA Intergenic Intergenic -5005 FBgn0052461 FBgn0052461 FBtr0078567 CG32461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12196 chr3R 24597774 24598039 + 25 NA Intergenic Intergenic -13950 FBgn0039598 FBgn0039598 FBtr0085313 CG14061 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13128 chrU 456708 456762 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3669 chr2L 22261157 22261278 + 25 NA Intergenic Intergenic 11339 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9328 chr3R 3146965 3147019 + 25 NA Intergenic Intergenic -4063 FBgn0037498 FBgn0037498 FBtr0081591 CG10029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12328 chr3R 25255223 25255277 + 25 NA intron (FBgn0004369, intron 7 of 18) protein_coding-intron (FBgn0004369, intron 7 of 18) -50170 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5160 chr2R 11172433 11172492 + 25 NA exon (FBgn0083959, exon 2 of 25) protein_coding-exon (FBgn0083959, exon 2 of 25) 7924 FBgn0083959 FBgn0083959 FBtr0110831 trpm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2152 chr2L 15032000 15032245 + 25 NA promoter-TSS (FBgn0051832) protein_coding-promoter-TSS (FBgn0051832) -402 FBgn0051832 FBgn0051832 FBtr0080726 CG31832 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1382 chr2L 9816225 9816333 + 25 NA intron (FBgn0032151, intron 5 of 13) protein_coding-intron (FBgn0032151, intron 4 of 13) -23172 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13175 chrU 1588122 1588204 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4730 chr2R 7707509 7707648 + 25 NA Intergenic Intergenic -5292 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9813 chr3R 7198206 7198534 + 25 NA promoter-TSS (FBgn0004595) protein_coding-promoter-TSS (FBgn0004595) -19517 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8846 chr3LHet 363900 363954 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5969 chr2R 18272270 18272527 + 25 NA intron (FBgn0034723, intron 1 of 6) protein_coding-intron (FBgn0034723, intron 1 of 6) 1757 FBgn0034723 FBgn0034723 FBtr0071822 CG13506 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1102 chr2L 8577355 8577567 + 25 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 6573 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1996 chr2L 14463543 14463597 + 25 NA Intergenic Intergenic -12648 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13618 chrX 8716265 8716332 + 25 NA Intergenic Intergenic -16058 FBgn0030065 FBgn0030065 FBtr0071253 CG12075 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7891 chr3L 13276804 13276863 + 25 NA TTS (FBgn0262622) protein_coding-TTS (FBgn0262622) 763 FBgn0264514 FBgn0264514 FBtr0333132 CR43913 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8477 chr3L 18081292 18081391 + 25 NA promoter-TSS (FBgn0085282) protein_coding-promoter-TSS (FBgn0085282) -921 FBgn0085282 FBgn0085282 FBtr0112447 CG34253 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6384 chr2RHet 606020 606075 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6559 chr2RHet 1934769 1934987 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13097 chrU 209002 209058 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6353 chr2RHet 493666 493858 + 25 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13428 chrX 426604 426665 + 25 NA intron (FBgn0000108, intron 2 of 10) protein_coding-intron (FBgn0000108, intron 2 of 11) 2131 FBgn0000108 FBgn0000108 FBtr0307291 Appl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_688 chr2L 4737450 4737699 + 25 NA intron (FBgn0031627, intron 3 of 6) protein_coding-intron (FBgn0031627, intron 3 of 6) -3116 FBgn0031626 FBgn0031626 FBtr0077419 CG15631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7910 chr3L 13415908 13415966 + 25 NA promoter-TSS (FBgn0052121) protein_coding-promoter-TSS (FBgn0052121) -501 FBgn0052121 FBgn0052121 FBtr0113424 CG32121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2262 chr2L 15478256 15478410 + 25 NA promoter-TSS (FBgn0003448) protein_coding-promoter-TSS (FBgn0003448) -64 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13770 chrX 16473917 16473971 + 25 NA intron (FBgn0030758, intron 1 of 1) protein_coding-intron (FBgn0030758, intron 1 of 1) -7962 FBgn0030759 FBgn0030759 FBtr0074282 CG13014 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9091 chr3R 1632769 1632893 + 25 NA exon (FBgn0263353, exon 3 of 4) protein_coding-exon (FBgn0263353, exon 3 of 4) 4781 FBgn0263353 FBgn0263353 FBtr0113195 CG11000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8151 chr3L 15502638 15502706 + 25 NA TTS (FBgn0004052) protein_coding-TTS (FBgn0004052) 127 FBgn0028377 FBgn0028377 FBtr0091756 gdl-ORF39 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12520 chr3R 26260231 26260312 + 25 NA TTS (FBgn0039770) protein_coding-TTS (FBgn0039770) 2485 FBgn0039769 FBgn0039769 FBtr0085644 CG15534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3137 chr2L 20003170 20003237 + 24 NA intron (FBgn0264443, intron 1 of 5) protein_coding-intron (FBgn0264443, intron 1 of 5) 14079 FBgn0264443 FBgn0264443 FBtr0332566 CG43861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3927 chr2R 544511 545015 + 24 NA Intergenic Intergenic -14599 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5273 chr2R 12278520 12278715 + 24 NA intron (FBgn0264273, intron 1 of 15) protein_coding-intron (FBgn0264273, intron 1 of 15) 4588 FBgn0264273 FBgn0264273 FBtr0100001 Sema-2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3999 chr2R 1403169 1403229 + 24 NA intron (FBgn0050438, intron 1 of 6) protein_coding-intron (FBgn0050438, intron 1 of 5) -7828 FBgn0033027 FBgn0033027 FBtr0302019 TpnC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12387 chr3R 25476058 25476121 + 24 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 9617 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7549 chr3L 10315204 10315295 + 24 NA Intergenic Intergenic 2303 FBgn0262381 FBgn0262381 FBtr0304227 mir-276b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8810 chr3L 24031915 24031973 + 24 NA Intergenic Intergenic 10329 FBgn0058045 FBgn0058045 FBtr0331586 CG40045 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4742 chr2R 7744417 7744621 + 24 NA exon (FBgn0013756, exon 2 of 5) protein_coding-exon (FBgn0013756, exon 2 of 5) -4296 FBgn0085259 FBgn0085259 FBtr0112423 CG34230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4762 chr2R 7850240 7850448 + 24 NA exon (FBgn0033668, exon 7 of 9) protein_coding-exon (FBgn0033668, exon 7 of 9) 6009 FBgn0033669 FBgn0033669 FBtr0088053 PI31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4306 chr2R 4634420 4634501 + 24 NA intron (FBgn0027585, intron 2 of 8) protein_coding-intron (FBgn0027585, intron 1 of 7) 9585 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1395 chr2L 9879722 9880135 + 24 NA intron (FBgn0032151, intron 1 of 13) protein_coding-intron (FBgn0032151, intron 1 of 13) 6322 FBgn0032151 FBgn0032151 FBtr0331284 nAcRalpha-30D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_540 chr2L 3690878 3691136 + 24 NA exon (FBgn0085369, exon 8 of 8) protein_coding-exon (FBgn0085369, exon 8 of 8) 1581 FBgn0031558 FBgn0031558 FBtr0077550 CG16704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11318 chr3R 18331126 18331180 + 24 NA intron (FBgn0038980, intron 1 of 7) protein_coding-intron (FBgn0038980, intron 1 of 7) 8216 FBgn0038980 FBgn0038980 FBtr0301484 oa2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7273 chr3L 7038283 7038339 + 24 NA exon (FBgn0260660, exon 15 of 22) protein_coding-exon (FBgn0260660, exon 15 of 22) -18417 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7930 chr3L 13583745 13583834 + 24 NA intron (FBgn0264001, intron 3 of 10) protein_coding-intron (FBgn0264001, intron 5 of 12) -30148 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2010 chr2L 14530857 14530916 + 24 NA promoter-TSS (FBgn0011866) tRNA-promoter-TSS (FBgn0011866) 38 FBgn0011866 FBgn0011866 FBtr0080663 tRNA:G3:35Be tRNA Nup98-S2-pascual-garcia2017_R1_peak_10732 chr3R 13910589 13910643 + 24 NA Intergenic Intergenic 3773 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6696 chr2RHet 3251874 3252106 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2365 chr2L 15940647 15940705 + 24 NA promoter-TSS (FBgn0028857) protein_coding-promoter-TSS (FBgn0028857) -765 FBgn0028857 FBgn0028857 FBtr0300613 CG12448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11287 chr3R 17984937 17985020 + 24 NA intron (FBgn0051163, intron 3 of 18) protein_coding-intron (FBgn0051163, intron 3 of 18) 25421 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13797 chrX 18133474 18133555 + 24 NA Intergenic Intergenic 3803 FBgn0030904 FBgn0030904 FBtr0300182 upd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13816 chrX 18587257 18587328 + 24 NA promoter-TSS (FBgn0010383) protein_coding-promoter-TSS (FBgn0010383) -514 FBgn0010383 FBgn0010383 FBtr0074609 Cyp18a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5784 chr2R 16848544 16848678 + 24 NA promoter-TSS (FBgn0008636) protein_coding-promoter-TSS (FBgn0008636) -197 FBgn0008636 FBgn0008636 FBtr0071556 hbn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11801 chr3R 23139486 23139821 + 24 NA exon (FBgn0039510, exon 13 of 32) protein_coding-exon (FBgn0039510, exon 13 of 32) 8394 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4630 chr2R 7120492 7120546 + 24 NA promoter-TSS (FBgn0033588) protein_coding-promoter-TSS (FBgn0033588) -463 FBgn0050021 FBgn0050021 FBtr0114570 metro protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9568 chr3R 5123781 5123835 + 24 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -23684 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12248 chr3R 24819823 24819894 + 24 NA exon (FBgn0039620, exon 7 of 10) protein_coding-exon (FBgn0039620, exon 7 of 10) 14696 FBgn0263579 FBgn0263579 FBtr0309743 mir-4947 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8173 chr3L 15788529 15788776 + 24 NA Intergenic Intergenic -12770 FBgn0036531 FBgn0036531 FBtr0075502 CG6244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13171 chrU 1397030 1397163 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6570 chr2RHet 1953063 1953134 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12875 chr3RHet 1694218 1694276 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13244 chrU 3533928 3534198 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5334 chr2R 12727380 12727444 + 24 NA Intergenic Intergenic 5131 FBgn0026754 FBgn0026754 FBtr0087076 Ugt37c1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6946 chr3L 2731448 2731502 + 24 NA intron (FBgn0052296, intron 1 of 4) protein_coding-intron (FBgn0052296, intron 1 of 4) 3205 FBgn0052296 FBgn0052296 FBtr0306332 Mrtf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10522 chr3R 12573505 12573559 + 24 NA intron (FBgn0020556, intron 1 of 2) ncRNA-intron (FBgn0020556, intron 2 of 2) -1424 FBgn0020556 FBgn0020556 FBtr0083344 bxd ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13262 chrU 5633609 5633663 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6965 chr3L 2955108 2955262 + 24 NA exon (FBgn0262593, exon 9 of 13) protein_coding-exon (FBgn0262593, exon 9 of 13) -3567 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2052 chr2L 14655572 14655677 + 24 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 33701 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1358 chr2L 9563648 9563711 + 24 NA intron (FBgn0032129, intron 1 of 8) protein_coding-intron (FBgn0032129, intron 1 of 8) -3253 FBgn0032129 FBgn0032129 FBtr0113030 jp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9920 chr3R 8120101 8120161 + 24 NA exon (FBgn0003651, exon 3 of 5) protein_coding-exon (FBgn0003651, exon 3 of 5) 13257 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1362 chr2L 9600108 9600162 + 24 NA exon (FBgn0032132, exon 1 of 4) protein_coding-exon (FBgn0032132, exon 1 of 4) 718 FBgn0032132 FBgn0032132 FBtr0114535 CG4382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_687 chr2L 4726184 4726238 + 24 NA Intergenic Intergenic 8247 FBgn0031626 FBgn0031626 FBtr0077419 CG15631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6728 chr3L 609288 609439 + 24 NA Intergenic Intergenic -2794 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11826 chr3R 23193840 23193894 + 24 NA TTS (FBgn0263453) ncRNA-TTS (FBgn0263453) 1720 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10780 chr3R 14287211 14287265 + 24 NA intron (FBgn0004652, intron 2 of 7) protein_coding-intron (FBgn0004652, intron 2 of 7) -49885 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9492 chr3R 4467135 4467201 + 24 NA TTS (FBgn0012028) tRNA-TTS (FBgn0012028) 979 FBgn0012028 FBgn0012028 FBtr0081895 tRNA:Y1:85Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_1306 chr2L 9054477 9054654 + 24 NA intron (FBgn0051708, intron 8 of 9) protein_coding-intron (FBgn0051708, intron 8 of 9) 16597 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3030 chr2L 19406577 19406791 + 24 NA intron (FBgn0041789, intron 7 of 8) protein_coding-intron (FBgn0041789, intron 6 of 7) -3116 FBgn0065096 FBgn0065096 FBtr0091700 snmRNA:359 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3816 chr2L 22711150 22711436 + 24 NA Intergenic Intergenic -20285 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10390 chr3R 11810490 11810554 + 24 NA Intergenic Intergenic -1401 FBgn0003507 FBgn0003507 FBtr0083216 srp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11422 chr3R 20382809 20382938 + 24 NA promoter-TSS (FBgn0004190) snRNA-promoter-TSS (FBgn0004190) -64 FBgn0004190 FBgn0004190 FBtr0084652 snRNA:U6:96Ac snRNA Nup98-S2-pascual-garcia2017_R1_peak_2907 chr2L 18548121 18548185 + 24 NA intron (FBgn0085370, intron 1 of 17) protein_coding-intron (FBgn0085370, intron 1 of 16) 23495 FBgn0085370 FBgn0085370 FBtr0303162 Pde11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6548 chr2RHet 1920271 1920573 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13328 chrUextra 1032654 1032764 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6222 chr2R 20481876 20481949 + 24 NA intron (FBgn0020521, intron 5 of 7) protein_coding-intron (FBgn0020521, intron 6 of 8) -3606 FBgn0035031 FBgn0035031 FBtr0072314 CG13587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7042 chr3L 4413921 4414043 + 24 NA promoter-TSS (FBgn0035542) protein_coding-promoter-TSS (FBgn0035542) -375 FBgn0035542 FBgn0035542 FBtr0113141 DOR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12904 chr3RHet 2493364 2493422 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3797 chr2L 22655532 22655618 + 24 NA Intergenic Intergenic -6494 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10118 chr3R 9650844 9650898 + 24 NA Intergenic Intergenic 2561 FBgn0002862 FBgn0002862 FBtr0082884 Mst87F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11121 chr3R 16488128 16488308 + 24 NA Intergenic Intergenic -5656 FBgn0038818 FBgn0038818 FBtr0083937 Nep4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_972 chr2L 7168516 7168570 + 24 NA Intergenic Intergenic -13693 FBgn0031893 FBgn0031893 FBtr0113028 CG4495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4546 chr2R 6243123 6243182 + 24 NA TTS (FBgn0261686) protein_coding-TTS (FBgn0261686) 184 FBgn0263271 FBgn0263271 FBtr0329874 CG43397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4688 chr2R 7437643 7437697 + 24 NA Intergenic Intergenic -22282 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6468 chr2RHet 1442615 1442669 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11463 chr3R 21341255 21341429 + 24 NA promoter-TSS (FBgn0011666) protein_coding-promoter-TSS (FBgn0011666) 9345 FBgn0039343 FBgn0039343 FBtr0084880 CG5111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11321 chr3R 18395775 18395830 + 24 NA promoter-TSS (FBgn0053110) protein_coding-promoter-TSS (FBgn0053110) -109 FBgn0053110 FBgn0053110 FBtr0084264 CG33110 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7169 chr3L 6255784 6255844 + 24 NA promoter-TSS (FBgn0001258) protein_coding-promoter-TSS (FBgn0001258) -1554 FBgn0001258 FBgn0001258 FBtr0332066 ImpL3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5627 chr2R 15568535 15568688 + 24 NA exon (FBgn0040730, exon 1 of 1) protein_coding-exon (FBgn0040730, exon 1 of 1) 267 FBgn0040730 FBgn0040730 FBtr0086482 CG15127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_262 chr2L 1455862 1455919 + 24 NA Intergenic Intergenic 13164 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_764 chr2L 5469944 5470001 + 24 NA Intergenic Intergenic 8331 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6541 chr2RHet 1909979 1910080 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7376 chr3L 8213914 8213968 + 24 NA Intergenic Intergenic -1300 FBgn0035859 FBgn0035859 FBtr0076700 CG13678 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_107 chr2L 910371 910428 + 24 NA Intergenic Intergenic -3687 FBgn0046113 FBgn0046113 FBtr0273244 GluRIIC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5723 chr2R 16240956 16241015 + 24 NA TTS (FBgn0034507) protein_coding-TTS (FBgn0034507) 1573 FBgn0034507 FBgn0034507 FBtr0290122 CG11192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3643 chr2L 22194716 22194852 + 24 NA intron (FBgn0259683, intron 5 of 6) protein_coding-intron (FBgn0259683, intron 5 of 6) 19369 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5447 chr2R 13908469 13908541 + 24 NA exon (FBgn0034289, exon 3 of 3) protein_coding-exon (FBgn0034289, exon 3 of 3) 751 FBgn0034289 FBgn0034289 FBtr0089630 CG10910 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4097 chr2R 2834307 2834403 + 24 NA promoter-TSS (FBgn0011892) tRNA-promoter-TSS (FBgn0011892) 30 FBgn0011892 FBgn0011892 FBtr0086190 tRNA:K2:42Ea tRNA Nup98-S2-pascual-garcia2017_R1_peak_7861 chr3L 13071358 13071438 + 24 NA Intergenic Intergenic 4354 FBgn0263661 FBgn0263661 FBtr0310106 CR43652 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1679 chr2L 12657506 12657625 + 24 NA promoter-TSS (FBgn0004394) protein_coding-promoter-TSS (FBgn0004394) -11209 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4901 chr2R 9045833 9045909 + 24 NA promoter-TSS (FBgn0020370) protein_coding-promoter-TSS (FBgn0020370) -62 FBgn0020370 FBgn0020370 FBtr0087775 TppII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13487 chrX 2418664 2418718 + 24 NA intron (FBgn0261451, intron 2 of 31) protein_coding-intron (FBgn0261451, intron 2 of 45) 20127 FBgn0263531 FBgn0263531 FBtr0309618 mir-4955 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6628 chr2RHet 2246941 2247178 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13265 chrU 6109991 6110186 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9454 chr3R 4193450 4193505 + 24 NA exon (FBgn0263416, exon 16 of 16) protein_coding-exon (FBgn0263416, exon 16 of 16) 4929 FBgn0037584 FBgn0037584 FBtr0301759 CG7963 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6987 chr3L 3270986 3271048 + 24 NA promoter-TSS (FBgn0035428) protein_coding-promoter-TSS (FBgn0035428) -19 FBgn0035428 FBgn0035428 FBtr0073051 CG14960 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_411 chr2L 2607249 2607309 + 24 NA Intergenic Intergenic -2867 FBgn0031440 FBgn0031440 FBtr0114513 CG15395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2782 chr2L 17903456 17903513 + 24 NA Intergenic Intergenic 9672 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12220 chr3R 24670467 24670522 + 24 NA promoter-TSS (FBgn0015589) protein_coding-promoter-TSS (FBgn0015589) -122 FBgn0015589 FBgn0015589 FBtr0085351 Apc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10753 chr3R 14093580 14093634 + 24 NA promoter-TSS (FBgn0038592) protein_coding-promoter-TSS (FBgn0038592) 97 FBgn0038592 FBgn0038592 FBtr0083571 CG18599 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_648 chr2L 4471732 4471786 + 24 NA intron (FBgn0011603, intron 4 of 9) protein_coding-intron (FBgn0011603, intron 4 of 9) 5265 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2512 chr2L 16719879 16719936 + 24 NA promoter-TSS (FBgn0000409) protein_coding-promoter-TSS (FBgn0000409) 33 FBgn0000409 FBgn0000409 FBtr0080889 Cyt-c-p protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7127 chr3L 5958080 5958159 + 24 NA Intergenic Intergenic 10988 FBgn0035656 FBgn0035656 FBtr0332041 CG10479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7052 chr3L 4511352 4511537 + 24 NA exon (FBgn0014073, exon 6 of 6) protein_coding-exon (FBgn0014073, exon 6 of 6) -3011 FBgn0261526 FBgn0261526 FBtr0301520 NT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_985 chr2L 7306856 7307201 + 24 NA promoter-TSS (FBgn0004009) protein_coding-promoter-TSS (FBgn0004009) -133 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10504 chr3R 12449433 12449488 + 24 NA exon (FBgn0038452, exon 3 of 5) protein_coding-exon (FBgn0038452, exon 3 of 5) 979 FBgn0038452 FBgn0038452 FBtr0083357 CG14905 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3393 chr2L 21375474 21375528 + 24 NA exon (FBgn0032945, exon 2 of 3) protein_coding-exon (FBgn0032945, exon 2 of 3) 4274 FBgn0032945 FBgn0032945 FBtr0081517 CG8665 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4238 chr2R 4091601 4091672 + 24 NA TTS (FBgn0033275) protein_coding-TTS (FBgn0033275) 1575 FBgn0033275 FBgn0033275 FBtr0088804 CG14756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4629 chr2R 7116209 7116264 + 24 NA intron (FBgn0050021, intron 4 of 7) protein_coding-intron (FBgn0050021, intron 5 of 8) 3820 FBgn0050021 FBgn0050021 FBtr0114570 metro protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8025 chr3L 14190056 14190116 + 24 NA intron (FBgn0013718, intron 1 of 10) protein_coding-intron (FBgn0013718, intron 1 of 9) -6337 FBgn0052141 FBgn0052141 FBtr0075735 CG32141 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13584 chrX 7098939 7099015 + 24 NA intron (FBgn0029939, intron 1 of 3) protein_coding-intron (FBgn0029939, intron 2 of 5) 8915 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10457 chr3R 12223198 12223298 + 24 NA intron (FBgn0003513, intron 2 of 8) protein_coding-intron (FBgn0003513, intron 2 of 7) 6164 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3303 chr2L 20843670 20843783 + 24 NA intron (FBgn0051676, intron 1 of 2) protein_coding-intron (FBgn0051676, intron 1 of 2) 2926 FBgn0051676 FBgn0051676 FBtr0081424 CG31676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5341 chr2R 12874057 12874111 + 24 NA intron (FBgn0004580, intron 6 of 10) protein_coding-intron (FBgn0004580, intron 6 of 10) 12015 FBgn0050461 FBgn0050461 FBtr0100252 CG30461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3441 chr2L 21728041 21728166 + 24 NA exon (FBgn0051619, exon 19 of 19) protein_coding-exon (FBgn0051619, exon 19 of 19) 29363 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1515 chr2L 11250628 11250682 + 24 NA intron (FBgn0264442, intron 5 of 6) protein_coding-intron (FBgn0264442, intron 7 of 8) 15804 FBgn0264442 FBgn0264442 FBtr0332559 ab protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13294 chrUextra 196456 196548 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6028 chr2R 18886315 18886504 + 24 NA promoter-TSS (FBgn0034808) protein_coding-promoter-TSS (FBgn0034808) -3 FBgn0034808 FBgn0034808 FBtr0071988 CG9896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2840 chr2L 18091158 18091240 + 24 NA exon (FBgn0032663, exon 2 of 2) protein_coding-exon (FBgn0032663, exon 2 of 2) 1039 FBgn0032663 FBgn0032663 FBtr0081045 CG15153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7293 chr3L 7254442 7254501 + 24 NA intron (FBgn0035755, intron 2 of 5) protein_coding-intron (FBgn0035755, intron 2 of 4) 2549 FBgn0035755 FBgn0035755 FBtr0309299 CG14830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8728 chr3L 23391658 23391887 + 24 NA Intergenic Intergenic 59346 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5491 chr2R 14349278 14349351 + 24 NA exon (FBgn0028496, exon 15 of 19) protein_coding-exon (FBgn0028496, exon 15 of 19) -7347 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4276 chr2R 4365612 4365819 + 24 NA intron (FBgn0050361, intron 17 of 18) protein_coding-intron (FBgn0050361, intron 11 of 12) 6227 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5117 chr2R 10850748 10850831 + 24 NA promoter-TSS (FBgn0033987) protein_coding-promoter-TSS (FBgn0033987) -2396 FBgn0033987 FBgn0033987 FBtr0087411 ckn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8043 chr3L 14385940 14385994 + 24 NA Intergenic Intergenic 9858 FBgn0036422 FBgn0036422 FBtr0075729 CG3868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11960 chr3R 23719531 23719897 + 24 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 11851 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12457 chr3R 25664792 25664851 + 24 NA Intergenic Intergenic -2558 FBgn0039709 FBgn0039709 FBtr0085488 Cad99C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11199 chr3R 17227491 17227545 + 24 NA exon (FBgn0263003, exon 1 of 1) protein_coding-exon (FBgn0263003, exon 1 of 1) 118 FBgn0263003 FBgn0263003 FBtr0306846 CG43311 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13141 chrU 1047506 1047650 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9921 chr3R 8123661 8123715 + 24 NA intron (FBgn0003651, intron 3 of 4) protein_coding-intron (FBgn0003651, intron 3 of 4) -13387 FBgn0038011 FBgn0038011 FBtr0082566 CG4066 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_988 chr2L 7341079 7341151 + 24 NA intron (FBgn0031902, intron 1 of 3) protein_coding-intron (FBgn0031902, intron 1 of 3) 6314 FBgn0031902 FBgn0031902 FBtr0303251 Wnt6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10925 chr3R 15352820 15352877 + 24 NA exon (FBgn0260003, exon 2 of 15) protein_coding-exon (FBgn0260003, exon 2 of 15) -36011 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13639 chrX 9976537 9976595 + 24 NA promoter-TSS (FBgn0030177) protein_coding-promoter-TSS (FBgn0030177) -43 FBgn0052685 FBgn0052685 FBtr0308584 ZAP3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7137 chr3L 6018166 6018352 + 24 NA exon (FBgn0052406, exon 6 of 7) protein_coding-exon (FBgn0052406, exon 6 of 7) 9452 FBgn0035661 FBgn0035661 FBtr0077068 CG10477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7939 chr3L 13646752 13646806 + 24 NA intron (FBgn0264001, intron 2 of 11) protein_coding-intron (FBgn0264001, intron 2 of 12) 32842 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5092 chr2R 10629624 10629732 + 24 NA exon (FBgn0033958, exon 4 of 5) protein_coding-exon (FBgn0033958, exon 4 of 5) -2931 FBgn0263376 FBgn0263376 FBtr0309057 CR43428 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13553 chrX 5639684 5639762 + 24 NA intron (FBgn0261383, intron 1 of 2) protein_coding-intron (FBgn0261383, intron 1 of 1) 1564 FBgn0261383 FBgn0261383 FBtr0070842 IntS6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11144 chr3R 16655637 16655705 + 24 NA intron (FBgn0027493, intron 1 of 5) protein_coding-intron (FBgn0027493, intron 1 of 4) 666 FBgn0027493 FBgn0027493 FBtr0310504 CG17273 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9258 chr3R 2746052 2746256 + 24 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) 12408 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7421 chr3L 8604357 8604463 + 24 NA intron (FBgn0035914, intron 2 of 5) protein_coding-intron (FBgn0035914, intron 2 of 5) -5925 FBgn0035915 FBgn0035915 FBtr0076638 S-Lap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13596 chrX 7597577 7597631 + 24 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) -4204 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3102 chr2L 19823828 19823904 + 24 NA intron (FBgn0263873, intron 2 of 15) protein_coding-intron (FBgn0263873, intron 2 of 15) 7452 FBgn0043021 FBgn0043021 FBtr0081294 snRNA:U5:38ABb snRNA Nup98-S2-pascual-garcia2017_R1_peak_6587 chr2RHet 1992263 1992381 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9571 chr3R 5126332 5126391 + 24 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -21131 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12019 chr3R 23972430 23972544 + 24 NA promoter-TSS (FBgn0085383) protein_coding-promoter-TSS (FBgn0085383) -115 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9266 chr3R 2804092 2804451 + 24 NA intron (FBgn0260642, intron 1 of 6) protein_coding-intron (FBgn0260642, intron 1 of 6) -45709 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5172 chr2R 11304208 11304278 + 24 NA exon (FBgn0263980, exon 3 of 15) protein_coding-exon (FBgn0263980, exon 3 of 15) 7369 FBgn0050472 FBgn0050472 FBtr0332396 CG30472 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10930 chr3R 15407136 15407196 + 24 NA intron (FBgn0260003, intron 1 of 10) protein_coding-intron (FBgn0260003, intron 26 of 34) -4752 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7505 chr3L 9586039 9586122 + 24 NA exon (FBgn0261555, exon 10 of 10) protein_coding-exon (FBgn0261555, exon 10 of 10) -4874 FBgn0036013 FBgn0036013 FBtr0076378 CG14177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3861 chr2L 22974117 22974288 + 24 NA Intergenic Intergenic 12465 FBgn0262887 FBgn0262887 FBtr0306299 CR43242 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7565 chr3L 10589152 10589357 + 24 NA Intergenic Intergenic 27422 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13111 chrU 251314 251699 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10311 chr3R 11343844 11343923 + 24 NA Intergenic Intergenic -9323 FBgn0038346 FBgn0038346 FBtr0083157 CG14872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8009 chr3L 14115284 14115365 + 24 NA intron (FBgn0042630, intron 3 of 6) protein_coding-intron (FBgn0042630, intron 3 of 6) 9073 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4702 chr2R 7513450 7513625 + 24 NA intron (FBgn0033638, intron 2 of 7) protein_coding-intron (FBgn0033638, intron 2 of 7) -7009 FBgn0086712 FBgn0086712 FBtr0088090 Egm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10397 chr3R 11896847 11897126 + 24 NA exon (FBgn0026059, exon 15 of 18) protein_coding-exon (FBgn0026059, exon 15 of 18) -3752 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2333 chr2L 15805689 15805743 + 24 NA Intergenic Intergenic 6425 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12846 chr3RHet 788985 789163 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7032 chr3L 4221505 4221564 + 24 NA TTS (FBgn0052252) ncRNA-TTS (FBgn0052252) 1200 FBgn0052252 FBgn0052252 FBtr0307363 CR32252 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8731 chr3L 23423823 23423878 + 24 NA Intergenic Intergenic 91424 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_990 chr2L 7357018 7357072 + 24 NA Intergenic Intergenic -7775 FBgn0031903 FBgn0031903 FBtr0303207 Wnt10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7370 chr3L 8153334 8153388 + 24 NA promoter-TSS (FBgn0264478) protein_coding-promoter-TSS (FBgn0264478) -487 FBgn0264478 FBgn0264478 FBtr0332759 CG43886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8379 chr3L 17346042 17346136 + 24 NA promoter-TSS (FBgn0036714) protein_coding-promoter-TSS (FBgn0036714) 570 FBgn0036714 FBgn0036714 FBtr0075215 CG7692 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1549 chr2L 11516751 11516830 + 24 NA promoter-TSS (FBgn0032364) protein_coding-promoter-TSS (FBgn0032364) 245 FBgn0032363 FBgn0032363 FBtr0080247 CG6509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13158 chrU 1256360 1256418 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12309 chr3R 25187188 25187250 + 24 NA Intergenic Intergenic -41883 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2089 chr2L 14797370 14797452 + 24 NA promoter-TSS (FBgn0028866) protein_coding-promoter-TSS (FBgn0028866) -874 FBgn0028866 FBgn0028866 FBtr0080687 CG18420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8510 chr3L 18453588 18453642 + 24 NA intron (FBgn0052196, intron 1 of 3) protein_coding-intron (FBgn0052196, intron 1 of 3) 509 FBgn0052196 FBgn0052196 FBtr0332868 CG32196 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4480 chr2R 5710450 5710521 + 24 NA promoter-TSS (FBgn0050001) protein_coding-promoter-TSS (FBgn0050001) 54 FBgn0050001 FBgn0050001 FBtr0088492 CG30001 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2209 chr2L 15245351 15245413 + 24 NA intron (FBgn0028516, intron 3 of 8) protein_coding-intron (FBgn0028516, intron 3 of 8) 536 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11003 chr3R 15758715 15758916 + 24 NA exon (FBgn0021776, exon 1 of 1) protein_coding-exon (FBgn0021776, exon 1 of 1) 2027 FBgn0021776 FBgn0021776 FBtr0083848 mira protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1128 chr2L 8620548 8620682 + 24 NA TTS (FBgn0051602) tRNA-TTS (FBgn0051602) 587 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4680 chr2R 7415344 7415541 + 24 NA promoter-TSS (FBgn0000577) protein_coding-promoter-TSS (FBgn0000577) -54 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8743 chr3L 23526761 23526822 + 24 NA Intergenic Intergenic -22234 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12966 chr4 763019 763160 + 24 NA exon (FBgn0005666, exon 20 of 41) protein_coding-exon (FBgn0005666, exon 20 of 41) 18059 FBgn0005666 FBgn0005666 FBtr0301341 bt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13742 chrX 14560020 14560112 + 24 NA Intergenic Intergenic -12202 FBgn0015773 FBgn0015773 FBtr0308337 NetA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12910 chr4 103911 103979 + 24 NA intron (FBgn0085432, intron 5 of 11) protein_coding-intron (FBgn0085432, intron 6 of 12) 13658 FBgn0085432 FBgn0085432 FBtr0112657 pan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4949 chr2R 9407579 9407808 + 24 NA exon (FBgn0260964, exon 4 of 9) protein_coding-exon (FBgn0260964, exon 4 of 9) -1791 FBgn0033850 FBgn0033850 FBtr0087673 CG13331 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11474 chr3R 21627087 21627146 + 24 NA Intergenic Intergenic -3616 FBgn0264429 FBgn0264429 FBtr0332549 CR43847 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1162 chr2L 8743151 8743217 + 24 NA Intergenic Intergenic -2524 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11153 chr3R 16716753 16716893 + 24 NA promoter-TSS (FBgn0051334) tRNA-promoter-TSS (FBgn0051334) -21 FBgn0051334 FBgn0051334 FBtr0083976 tRNA:CR31334 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2670 chr2L 17349257 17349404 + 24 NA Intergenic Intergenic 5338 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12976 chr4 883425 883479 + 24 NA exon (FBgn0039936, exon 5 of 9) protein_coding-exon (FBgn0039936, exon 5 of 9) 4200 FBgn0039936 FBgn0039936 FBtr0300886 CG11148 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5071 chr2R 10512204 10512259 + 24 NA TTS (FBgn0082930) snoRNA-TTS (FBgn0082930) 473 FBgn0082919 FBgn0082919 FBtr0113511 snoRNA:Or-CD4 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_10669 chr3R 13568220 13568285 + 24 NA intron (FBgn0038541, intron 4 of 5) protein_coding-intron (FBgn0038541, intron 3 of 4) 5919 FBgn0038541 FBgn0038541 FBtr0083512 TyrRII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4801 chr2R 8132018 8132096 + 24 NA exon (FBgn0262889, exon 1 of 2) protein_coding-exon (FBgn0262889, exon 1 of 2) 110 FBgn0262889 FBgn0262889 FBtr0306303 CG43244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1068 chr2L 8334830 8335039 + 24 NA Intergenic Intergenic -3353 FBgn0032023 FBgn0032023 FBtr0079604 CG14274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9163 chr3R 2161989 2162055 + 24 NA exon (FBgn0037429, exon 3 of 4) protein_coding-exon (FBgn0037429, exon 3 of 4) 936 FBgn0037429 FBgn0037429 FBtr0301493 Osi19 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12762 chr3R 27539183 27539245 + 24 NA promoter-TSS (FBgn0003870) protein_coding-promoter-TSS (FBgn0003870) 4217 FBgn0054046 FBgn0054046 FBtr0308935 CR34046 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3208 chr2L 20404289 20404497 + 24 NA Intergenic Intergenic -4999 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8163 chr3L 15663848 15663928 + 24 NA Intergenic Intergenic 8921 FBgn0262528 FBgn0262528 FBtr0304968 CG43082 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12886 chr3RHet 2023323 2023505 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12396 chr3R 25509148 25509220 + 24 NA exon (FBgn0013972, exon 2 of 5) protein_coding-exon (FBgn0013972, exon 2 of 5) 959 FBgn0013972 FBgn0013972 FBtr0085453 Gycalpha99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4218 chr2R 3916951 3917054 + 24 NA exon (FBgn0263970, exon 1 of 2) ncRNA-exon (FBgn0263970, exon 1 of 2) 431 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13781 chrX 17115200 17115254 + 24 NA promoter-TSS (FBgn0030830) protein_coding-promoter-TSS (FBgn0030830) -248 FBgn0030830 FBgn0030830 FBtr0114540 CG5172 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9476 chr3R 4358490 4358547 + 24 NA Intergenic Intergenic -3919 FBgn0040531 FBgn0040531 FBtr0112769 CG11741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3990 chr2R 1333356 1333410 + 24 NA intron (FBgn0259247, intron 6 of 7) protein_coding-intron (FBgn0259247, intron 6 of 7) 29526 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11949 chr3R 23657895 23658085 + 24 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -12821 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2972 chr2L 19134968 19135152 + 24 NA exon (FBgn0086447, exon 1 of 2) protein_coding-exon (FBgn0086447, exon 1 of 2) 173 FBgn0086447 FBgn0086447 FBtr0081161 l(2)37Cg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1325 chr2L 9284230 9284300 + 24 NA intron (FBgn0263984, intron 2 of 2) protein_coding-intron (FBgn0028433, intron 3 of 3) 20742 FBgn0262033 FBgn0262033 FBtr0303929 CG42844 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6903 chr3L 2202666 2202756 + 24 NA Intergenic Intergenic 5280 FBgn0035315 FBgn0035315 FBtr0072872 CG8960 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4302 chr2R 4611681 4611735 + 24 NA promoter-TSS (FBgn0005695) protein_coding-promoter-TSS (FBgn0005695) -57 FBgn0005695 FBgn0005695 FBtr0088710 gcl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10478 chr3R 12327639 12327709 + 24 NA promoter-TSS (FBgn0028381) protein_coding-promoter-TSS (FBgn0028381) -280 FBgn0028381 FBgn0028381 FBtr0083304 decay protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9101 chr3R 1703144 1703198 + 24 NA exon (FBgn0083949, exon 13 of 17) protein_coding-exon (FBgn0083949, exon 13 of 17) -16152 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3924 chr2R 542903 543144 + 24 NA Intergenic Intergenic -16339 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4859 chr2R 8722182 8722241 + 24 NA Intergenic Intergenic 7852 FBgn0033775 FBgn0033775 FBtr0087820 Cyp9h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13486 chrX 2211474 2211630 + 24 NA intron (FBgn0003079, intron 2 of 5) protein_coding-intron (FBgn0003079, intron 2 of 5) 4745 FBgn0054052 FBgn0054052 FBtr0308938 CR34052 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11561 chr3R 21985240 21985301 + 24 NA Intergenic Intergenic -11301 FBgn0051323 FBgn0051323 FBtr0307339 CG31323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10383 chr3R 11749821 11749894 + 24 NA intron (FBgn0038385, intron 1 of 4) protein_coding-intron (FBgn0038385, intron 1 of 4) -1494 FBgn0085305 FBgn0085305 FBtr0112471 CG34276 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12624 chr3R 26915437 26915491 + 24 NA TTS (FBgn0039816) protein_coding-TTS (FBgn0039816) 7576 FBgn0039816 FBgn0039816 FBtr0085741 CG11317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1683 chr2L 12666000 12666247 + 24 NA intron (FBgn0004394, intron 2 of 4) protein_coding-intron (FBgn0004394, intron 2 of 4) 3591 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8873 chr3LHet 926664 926739 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3543 chr2L 21968081 21968225 + 24 NA Intergenic Intergenic 24780 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8128 chr3L 15273511 15273565 + 24 NA Intergenic Intergenic -18520 FBgn0036491 FBgn0036491 FBtr0113172 Best4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7781 chr3L 12436750 12436937 + 24 NA Intergenic Intergenic -11075 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2745 chr2L 17784767 17784849 + 24 NA Intergenic Intergenic -7604 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8418 chr3L 17614894 17614948 + 24 NA promoter-TSS (FBgn0036741) protein_coding-promoter-TSS (FBgn0036741) -3 FBgn0036741 FBgn0036741 FBtr0075182 CG7510 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8853 chr3LHet 553451 553505 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10484 chr3R 12350323 12350377 + 24 NA intron (FBgn0259244, intron 2 of 15) protein_coding-intron (FBgn0259244, intron 2 of 16) 21827 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1169 chr2L 8757627 8757695 + 24 NA Intergenic Intergenic 5356 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2890 chr2L 18391121 18391216 + 24 NA exon (FBgn0000636, exon 6 of 8) protein_coding-exon (FBgn0000636, exon 6 of 8) 12542 FBgn0085200 FBgn0085200 FBtr0305066 CG34171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10593 chr3R 13059024 13059209 + 24 NA exon (FBgn0038494, exon 5 of 6) protein_coding-exon (FBgn0038494, exon 5 of 6) -13510 FBgn0051262 FBgn0051262 FBtr0302853 CG31262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6408 chr2RHet 753973 754032 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_751 chr2L 5407066 5407254 + 24 NA exon (FBgn0016660, exon 2 of 6) protein_coding-exon (FBgn0016660, exon 2 of 6) 2818 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_716 chr2L 5043179 5043241 + 24 NA promoter-TSS (FBgn0031674) protein_coding-promoter-TSS (FBgn0031674) -52 FBgn0031673 FBgn0031673 FBtr0333539 CG31650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5368 chr2R 13170207 13170261 + 24 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) 20390 FBgn0261642 FBgn0261642 FBtr0086993 mbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13633 chrX 9587801 9588166 + 24 NA promoter-TSS (FBgn0000233) protein_coding-promoter-TSS (FBgn0000233) -238 FBgn0000233 FBgn0000233 FBtr0071379 btd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7588 chr3L 10698802 10698858 + 24 NA Intergenic Intergenic -8853 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13239 chrU 3293533 3293725 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2042 chr2L 14626806 14626872 + 24 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 10570 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3828 chr2L 22856492 22856569 + 24 NA Intergenic Intergenic -13322 FBgn0058005 FBgn0058005 FBtr0308291 CG40005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13532 chrX 4448221 4448313 + 24 NA promoter-TSS (FBgn0029715) protein_coding-promoter-TSS (FBgn0029715) -41 FBgn0029715 FBgn0029715 FBtr0070698 CG11444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7959 chr3L 13747523 13747577 + 24 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 48950 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5295 chr2R 12404661 12404896 + 24 NA exon (FBgn0011260, exon 2 of 15) protein_coding-exon (FBgn0011260, exon 2 of 15) 218 FBgn0011260 FBgn0011260 FBtr0087091 Sema-2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12294 chr3R 25151047 25151189 + 24 NA Intergenic Intergenic -5782 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2070 chr2L 14744961 14745161 + 24 NA TTS (FBgn0261567) protein_coding-TTS (FBgn0261567) 149 FBgn0260955 FBgn0260955 FBtr0301742 CG42587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7223 chr3L 6745456 6745520 + 24 NA promoter-TSS (FBgn0035714) protein_coding-promoter-TSS (FBgn0035714) -102 FBgn0035713 FBgn0035713 FBtr0076951 CG10107 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9706 chr3R 6426524 6426584 + 24 NA intron (FBgn0001235, intron 2 of 12) protein_coding-intron (FBgn0001235, intron 2 of 11) 4838 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10833 chr3R 14604085 14604145 + 24 NA intron (FBgn0038652, intron 2 of 10) protein_coding-intron (FBgn0038652, intron 2 of 10) 13955 FBgn0038652 FBgn0038652 FBtr0083679 CG7720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6781 chr3L 1073059 1073197 + 24 NA intron (FBgn0004870, intron 1 of 3) protein_coding-intron (FBgn0004870, intron 1 of 3) 27961 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4230 chr2R 3967507 3967575 + 24 NA promoter-TSS (FBgn0021814) protein_coding-promoter-TSS (FBgn0021814) 20 FBgn0021814 FBgn0021814 FBtr0088825 Vps28 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10865 chr3R 14837304 14837358 + 24 NA exon (FBgn0026239, exon 3 of 5) protein_coding-exon (FBgn0026239, exon 3 of 5) 12413 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10285 chr3R 11219083 11219243 + 24 NA exon (FBgn0262483, exon 12 of 14) protein_coding-exon (FBgn0262483, exon 12 of 14) -10490 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7159 chr3L 6149880 6149955 + 24 NA exon (FBgn0035685, exon 2 of 2) protein_coding-exon (FBgn0035685, exon 2 of 2) 560 FBgn0035685 FBgn0035685 FBtr0077020 CG13297 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8346 chr3L 17173641 17173730 + 24 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 13722 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2673 chr2L 17355675 17355983 + 24 NA Intergenic Intergenic -1161 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5400 chr2R 13505403 13505457 + 24 NA intron (FBgn0034253, intron 2 of 8) protein_coding-intron (FBgn0034253, intron 2 of 8) 1169 FBgn0082922 FBgn0082922 FBtr0113512 snoRNA:Or-aca4 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7616 chr3L 10831383 10831483 + 24 NA Intergenic Intergenic -20071 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1764 chr2L 13060294 13060547 + 24 NA promoter-TSS (FBgn0262160) protein_coding-promoter-TSS (FBgn0262160) -305 FBgn0262160 FBgn0262160 FBtr0089956 CG9932 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13308 chrUextra 380493 381005 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12201 chr3R 24604167 24604264 + 24 NA Intergenic Intergenic -11124 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9056 chr3R 1317632 1317930 + 24 NA exon (FBgn0051547, exon 5 of 10) protein_coding-exon (FBgn0051547, exon 5 of 10) 6527 FBgn0051550 FBgn0051550 FBtr0078685 CG31550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4205 chr2R 3885468 3885554 + 24 NA exon (FBgn0027788, exon 1 of 3) protein_coding-exon (FBgn0027788, exon 1 of 3) 567 FBgn0027788 FBgn0027788 FBtr0088869 Hey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4706 chr2R 7542591 7542657 + 24 NA exon (FBgn0033640, exon 2 of 3) protein_coding-exon (FBgn0033640, exon 2 of 3) 221 FBgn0033640 FBgn0033640 FBtr0088072 CG13198 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9705 chr3R 6416925 6416979 + 24 NA intron (FBgn0001235, intron 4 of 12) protein_coding-intron (FBgn0001235, intron 4 of 11) 14440 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6434 chr2RHet 984279 984397 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9360 chr3R 3422816 3422870 + 24 NA exon (FBgn0083963, exon 4 of 13) protein_coding-exon (FBgn0083963, exon 4 of 13) 42313 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13400 chrUextra 25505605 25505697 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8861 chr3LHet 812172 812226 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5698 chr2R 16048955 16049024 + 24 NA Intergenic Intergenic 15351 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6947 chr3L 2732360 2732551 + 24 NA intron (FBgn0052296, intron 1 of 4) protein_coding-intron (FBgn0052296, intron 1 of 4) 2225 FBgn0052296 FBgn0052296 FBtr0306332 Mrtf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2276 chr2L 15515452 15515508 + 24 NA Intergenic Intergenic -6958 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_639 chr2L 4431661 4431727 + 24 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -2214 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11241 chr3R 17550814 17550876 + 24 NA Intergenic Intergenic 4772 FBgn0262542 FBgn0262542 FBtr0304882 CR43096 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5176 chr2R 11350350 11350464 + 24 NA intron (FBgn0263980, intron 14 of 17) protein_coding-intron (FBgn0263980, intron 14 of 14) 19931 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10257 chr3R 10884440 10884499 + 24 NA intron (FBgn0038282, intron 7 of 7) protein_coding-intron (FBgn0038282, intron 7 of 7) 18458 FBgn0038282 FBgn0038282 FBtr0089376 dpr9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6600 chr2RHet 2133009 2133197 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13048 chrU 43670 43729 + 24 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_19 chr2L 285743 285813 + 23 NA promoter-TSS (FBgn0031245) protein_coding-promoter-TSS (FBgn0031245) -2497 FBgn0031244 FBgn0031244 FBtr0078137 CG11601 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7908 chr3L 13397824 13398028 + 23 NA Intergenic Intergenic -3701 FBgn0002573 FBgn0002573 FBtr0075862 sens protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3748 chr2L 22551702 22551786 + 23 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 79262 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10928 chr3R 15367371 15367425 + 23 NA intron (FBgn0260003, intron 2 of 14) protein_coding-intron (FBgn0260003, intron 22 of 34) -44520 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2114 chr2L 14910951 14911005 + 23 NA intron (FBgn0259213, intron 19 of 19) protein_coding-intron (FBgn0259213, intron 19 of 19) -13757 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10474 chr3R 12315134 12315229 + 23 NA exon (FBgn0038439, exon 6 of 12) protein_coding-exon (FBgn0038439, exon 6 of 12) -5056 FBgn0038438 FBgn0038438 FBtr0083307 Der-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9165 chr3R 2179102 2179163 + 23 NA promoter-TSS (FBgn0014001) protein_coding-promoter-TSS (FBgn0014001) 2504 FBgn0014001 FBgn0014001 FBtr0081716 Pak protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11229 chr3R 17477136 17477300 + 23 NA intron (FBgn0011766, intron 1 of 7) protein_coding-intron (FBgn0011766, intron 1 of 7) 11462 FBgn0038893 FBgn0038893 FBtr0084116 CG6353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10997 chr3R 15719585 15719721 + 23 NA exon (FBgn0038744, exon 2 of 9) protein_coding-exon (FBgn0038744, exon 2 of 9) 3083 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5394 chr2R 13460292 13460353 + 23 NA promoter-TSS (FBgn0016701) protein_coding-promoter-TSS (FBgn0016701) -13 FBgn0250868 FBgn0250868 FBtr0290307 CG42239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10801 chr3R 14359985 14360058 + 23 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 11287 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5694 chr2R 16035092 16035146 + 23 NA TTS (FBgn0034481) protein_coding-TTS (FBgn0034481) 1481 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8624 chr3L 20991569 20991623 + 23 NA exon (FBgn0003415, exon 10 of 13) protein_coding-exon (FBgn0003415, exon 10 of 13) 6823 FBgn0037042 FBgn0037042 FBtr0078286 CG12984 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4197 chr2R 3776623 3776690 + 23 NA promoter-TSS (FBgn0050377) protein_coding-promoter-TSS (FBgn0050377) -924 FBgn0050377 FBgn0050377 FBtr0088844 CG30377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13146 chrU 1091649 1091902 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7652 chr3L 11376230 11376293 + 23 NA TTS (FBgn0261813) protein_coding-TTS (FBgn0261813) 1062 FBgn0261813 FBgn0261813 FBtr0303299 CG42755 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_238 chr2L 1395260 1395314 + 23 NA intron (FBgn0002543, intron 3 of 13) protein_coding-intron (FBgn0002543, intron 3 of 13) 25162 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4399 chr2R 5182305 5182368 + 23 NA promoter-TSS (FBgn0028408) protein_coding-promoter-TSS (FBgn0028408) 1222 FBgn0028408 FBgn0028408 FBtr0112930 Drep-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9252 chr3R 2715470 2715524 + 23 NA Intergenic Intergenic 14907 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5592 chr2R 15236890 15237108 + 23 NA exon (FBgn0050127, exon 2 of 8) protein_coding-exon (FBgn0050127, exon 2 of 8) 7031 FBgn0050127 FBgn0050127 FBtr0332919 CG30127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12065 chr3R 24121773 24121856 + 23 NA Intergenic Intergenic 1988 FBgn0039576 FBgn0039576 FBtr0085279 CG17856 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9764 chr3R 6840131 6840211 + 23 NA intron (FBgn0083950, intron 5 of 13) protein_coding-intron (FBgn0083950, intron 5 of 15) 20966 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10572 chr3R 12795298 12795534 + 23 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -5510 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13582 chrX 7088837 7088944 + 23 NA intron (FBgn0029939, intron 2 of 5) protein_coding-intron (FBgn0029939, intron 2 of 5) -1172 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_632 chr2L 4416460 4416514 + 23 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) 2561 FBgn0051963 FBgn0051963 FBtr0077458 tRNA:CR31963 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11377 chr3R 19339615 19339669 + 23 NA TTS (FBgn0039081) protein_coding-TTS (FBgn0039081) 4393 FBgn0039081 FBgn0039081 FBtr0301859 Irk2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_18 chr2L 277270 277336 + 23 NA promoter-TSS (FBgn0003444) protein_coding-promoter-TSS (FBgn0003444) 68 FBgn0086855 FBgn0086855 FBtr0330649 CG17078 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1494 chr2L 11114232 11114287 + 23 NA promoter-TSS (FBgn0041246) protein_coding-promoter-TSS (FBgn0041246) 76 FBgn0041246 FBgn0041246 FBtr0080198 Gr32a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8827 chr3L 24156753 24156808 + 23 NA intron (FBgn0011288, intron 4 of 6) protein_coding-intron (FBgn0011288, intron 4 of 7) 89451 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4755 chr2R 7823503 7823559 + 23 NA Intergenic Intergenic -3458 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10736 chr3R 13953767 13953828 + 23 NA intron (FBgn0003499, intron 4 of 4) protein_coding-intron (FBgn0003499, intron 4 of 4) 19082 FBgn0051518 FBgn0051518 FBtr0083545 tRNA:CR31518 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8213 chr3L 16070315 16070397 + 23 NA exon (FBgn0005536, exon 5 of 7) protein_coding-exon (FBgn0005536, exon 5 of 7) -5295 FBgn0053258 FBgn0053258 FBtr0301030 CG33258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10602 chr3R 13111761 13111838 + 23 NA TTS (FBgn0051419) protein_coding-TTS (FBgn0051419) 1161 FBgn0263500 FBgn0263500 FBtr0309518 CR43489 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_920 chr2L 6775118 6775339 + 23 NA promoter-TSS (FBgn0031858) protein_coding-promoter-TSS (FBgn0031858) -484 FBgn0031858 FBgn0031858 FBtr0332335 CG17378 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11445 chr3R 20817758 20817812 + 23 NA intron (FBgn0039257, intron 2 of 7) protein_coding-intron (FBgn0039257, intron 1 of 6) 7679 FBgn0039257 FBgn0039257 FBtr0305667 tnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10995 chr3R 15716263 15716473 + 23 NA promoter-TSS (FBgn0038744) protein_coding-promoter-TSS (FBgn0038744) -202 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9073 chr3R 1394597 1394661 + 23 NA promoter-TSS (FBgn0041191) protein_coding-promoter-TSS (FBgn0041191) -52 FBgn0041191 FBgn0041191 FBtr0078694 Rheb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7436 chr3L 8735161 8735251 + 23 NA exon (FBgn0003149, exon 4 of 9) protein_coding-exon (FBgn0003149, exon 4 of 9) -3199 FBgn0003149 FBgn0003149 FBtr0306639 Prm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13760 chrX 15985529 15985691 + 23 NA promoter-TSS (FBgn0028397) protein_coding-promoter-TSS (FBgn0028397) -4188 FBgn0028397 FBgn0028397 FBtr0310317 Tob protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11660 chr3R 22423963 22424017 + 23 NA intron (FBgn0263289, intron 23 of 24) protein_coding-intron (FBgn0263289, intron 23 of 24) -20855 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_330 chr2L 1724367 1724423 + 23 NA promoter-TSS (FBgn0031359) protein_coding-promoter-TSS (FBgn0031359) -7 FBgn0031359 FBgn0031359 FBtr0077910 CG18317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2764 chr2L 17818719 17818798 + 23 NA intron (FBgn0262018, intron 3 of 14) protein_coding-intron (FBgn0262018, intron 2 of 13) -6086 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9098 chr3R 1675468 1675522 + 23 NA TTS (FBgn0029088) protein_coding-TTS (FBgn0029088) 608 FBgn0037389 FBgn0037389 FBtr0306741 CR10991 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11792 chr3R 23051910 23051986 + 23 NA Intergenic Intergenic 2296 FBgn0261995 FBgn0261995 FBtr0303825 CG42813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6918 chr3L 2297665 2297883 + 23 NA intron (FBgn0264002, intron 2 of 3) protein_coding-intron (FBgn0264002, intron 2 of 3) 14891 FBgn0264002 FBgn0264002 FBtr0330358 DmsR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12742 chr3R 27452792 27452891 + 23 NA intron (FBgn0039862, intron 1 of 3) protein_coding-intron (FBgn0039862, intron 1 of 3) 4983 FBgn0039862 FBgn0039862 FBtr0330107 kek6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9495 chr3R 4470225 4470279 + 23 NA exon (FBgn0037601, exon 4 of 7) protein_coding-exon (FBgn0037601, exon 4 of 7) 927 FBgn0037601 FBgn0037601 FBtr0081893 Cyp313b1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_119 chr2L 933648 933705 + 23 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 10883 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8324 chr3L 17055201 17055339 + 23 NA exon (FBgn0260943, exon 10 of 10) protein_coding-exon (FBgn0260943, exon 10 of 10) 6557 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_404 chr2L 2533983 2534164 + 23 NA Intergenic Intergenic -16036 FBgn0031430 FBgn0031430 FBtr0077781 CG3528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2095 chr2L 14816906 14816960 + 23 NA Intergenic Intergenic 6145 FBgn0053309 FBgn0053309 FBtr0080674 CG33309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11737 chr3R 22726224 22726278 + 23 NA intron (FBgn0004359, intron 2 of 2) protein_coding-intron (FBgn0004359, intron 2 of 2) 12357 FBgn0004510 FBgn0004510 FBtr0330167 Ets97D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5901 chr2R 17713492 17713554 + 23 NA exon (FBgn0034662, exon 4 of 6) protein_coding-exon (FBgn0034662, exon 4 of 6) 5330 FBgn0034662 FBgn0034662 FBtr0302446 CG13492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13784 chrX 17317769 17317823 + 23 NA exon (FBgn0030839, exon 1 of 4) protein_coding-exon (FBgn0030839, exon 1 of 4) -1608 FBgn0027602 FBgn0027602 FBtr0074440 CG8611 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2575 chr2L 17002642 17002808 + 23 NA Intergenic Intergenic 10329 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2108 chr2L 14884481 14884816 + 23 NA promoter-TSS (FBgn0013301) protein_coding-promoter-TSS (FBgn0013301) -933 FBgn0013301 FBgn0013301 FBtr0080681 Mst35Bb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11016 chr3R 15866523 15866806 + 23 NA intron (FBgn0040571, intron 2 of 2) protein_coding-intron (FBgn0040571, intron 2 of 2) -1815 FBgn0064119 FBgn0064119 FBtr0300808 CG33934 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9808 chr3R 7170807 7170861 + 23 NA intron (FBgn0004595, intron 2 of 7) protein_coding-intron (FBgn0004595, intron 2 of 7) 8019 FBgn0026064 FBgn0026064 FBtr0301426 KP78a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12326 chr3R 25247575 25247636 + 23 NA intron (FBgn0004369, intron 5 of 18) protein_coding-intron (FBgn0004369, intron 5 of 18) -57815 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1729 chr2L 12875961 12876015 + 23 NA Intergenic Intergenic -36542 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10973 chr3R 15601686 15601892 + 23 NA TTS (FBgn0024963) protein_coding-TTS (FBgn0024963) 1213 FBgn0038731 FBgn0038731 FBtr0083797 CG11659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2966 chr2L 19103440 19103511 + 23 NA TTS (FBgn0032755) protein_coding-TTS (FBgn0032755) 1431 FBgn0032755 FBgn0032755 FBtr0081152 CG17344 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5967 chr2R 18260815 18261067 + 23 NA promoter-TSS (FBgn0034720) protein_coding-promoter-TSS (FBgn0034720) -331 FBgn0034720 FBgn0034720 FBtr0113107 Liprin-gamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4719 chr2R 7673728 7673807 + 23 NA intron (FBgn0033652, intron 1 of 3) protein_coding-intron (FBgn0033652, intron 1 of 3) 3231 FBgn0033651 FBgn0033651 FBtr0088065 Tango3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3856 chr2L 22925417 22925647 + 23 NA Intergenic Intergenic -6972 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12173 chr3R 24543011 24543292 + 23 NA intron (FBgn0027655, intron 15 of 28) protein_coding-intron (FBgn0027655, intron 15 of 28) 21187 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13573 chrX 6185313 6185368 + 23 NA promoter-TSS (FBgn0029858) protein_coding-promoter-TSS (FBgn0029858) -64 FBgn0028685 FBgn0028685 FBtr0305495 Rpt4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2411 chr2L 16086649 16086703 + 23 NA Intergenic Intergenic -8333 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1587 chr2L 11836409 11836463 + 23 NA promoter-TSS (FBgn0261056) protein_coding-promoter-TSS (FBgn0261056) -807 FBgn0261056 FBgn0261056 FBtr0301936 Sfp33A4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13847 chrX 21237795 21237870 + 23 NA intron (FBgn0024251, intron 2 of 4) protein_coding-intron (FBgn0024182, intron 2 of 4) -1809 FBgn0024251 FBgn0024251 FBtr0331744 bbx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8976 chr3R 627894 628012 + 23 NA promoter-TSS (FBgn0260794) protein_coding-promoter-TSS (FBgn0260794) 9830 FBgn0026417 FBgn0026417 FBtr0078876 Hus1-like protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1199 chr2L 8794434 8794600 + 23 NA Intergenic Intergenic -12023 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11627 chr3R 22237795 22237855 + 23 NA Intergenic Intergenic -1985 FBgn0039425 FBgn0039425 FBtr0306708 CG5432 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12372 chr3R 25436267 25436322 + 23 NA intron (FBgn0086361, intron 6 of 6) protein_coding-intron (FBgn0086361, intron 6 of 6) 2095 FBgn0262873 FBgn0262873 FBtr0306279 Diedel2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3084 chr2L 19727927 19728112 + 23 NA exon (FBgn0000464, exon 14 of 17) protein_coding-exon (FBgn0000464, exon 14 of 17) 7701 FBgn0032815 FBgn0032815 FBtr0331244 CG10462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9353 chr3R 3341603 3341657 + 23 NA promoter-TSS (FBgn0015576) protein_coding-promoter-TSS (FBgn0015576) -239 FBgn0015576 FBgn0015576 FBtr0081553 alpha-Est8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3623 chr2L 22100568 22100630 + 23 NA Intergenic Intergenic 3802 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3648 chr2L 22198943 22199008 + 23 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 15290 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8462 chr3L 18020716 18020801 + 23 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -12659 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10153 chr3R 9843531 9843587 + 23 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 8122 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1731 chr2L 12880977 12881039 + 23 NA Intergenic Intergenic -31522 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13227 chrU 2646062 2646603 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3975 chr2R 897069 897125 + 23 NA intron (FBgn0040849, intron 2 of 4) protein_coding-intron (FBgn0040849, intron 2 of 4) 59925 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7439 chr3L 8742098 8742172 + 23 NA TTS (FBgn0040828) protein_coding-TTS (FBgn0040828) 691 FBgn0040828 FBgn0040828 FBtr0076592 CG13306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12843 chr3RHet 751187 751418 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7269 chr3L 7007966 7008020 + 23 NA exon (FBgn0260660, exon 1 of 17) protein_coding-exon (FBgn0260660, exon 1 of 17) 11901 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11020 chr3R 15884840 15884913 + 23 NA exon (FBgn0038772, exon 3 of 3) protein_coding-exon (FBgn0038772, exon 3 of 3) 1404 FBgn0038772 FBgn0038772 FBtr0083835 CG4973 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13159 chrU 1256779 1256856 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3223 chr2L 20502319 20502389 + 23 NA Intergenic Intergenic 7248 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6522 chr2RHet 1884872 1884927 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9256 chr3R 2738534 2738664 + 23 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) -8195 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3694 chr2L 22340580 22341006 + 23 NA exon (FBgn0263091, exon 1 of 1) pseudogene-exon (FBgn0263091, exon 1 of 1) 171 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_541 chr2L 3692289 3692345 + 23 NA TTS (FBgn0031559) protein_coding-TTS (FBgn0031559) 271 FBgn0031558 FBgn0031558 FBtr0077550 CG16704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13015 chr4 1029250 1029496 + 23 NA TTS (FBgn0019650) protein_coding-TTS (FBgn0019650) 18347 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10750 chr3R 14068380 14068466 + 23 NA promoter-TSS (FBgn0020238) protein_coding-promoter-TSS (FBgn0020238) 170 FBgn0020238 FBgn0020238 FBtr0083567 14-3-3epsilon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4194 chr2R 3739970 3740057 + 23 NA intron (FBgn0085390, intron 5 of 19) protein_coding-intron (FBgn0085390, intron 7 of 20) 20142 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1724 chr2L 12850637 12850706 + 23 NA Intergenic Intergenic -27884 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2047 chr2L 14634967 14635122 + 23 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 18775 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13698 chrX 12962507 12962588 + 23 NA exon (FBgn0261388, exon 5 of 15) protein_coding-exon (FBgn0261388, exon 5 of 15) 6383 FBgn0262222 FBgn0262222 FBtr0304282 mir-971 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12509 chr3R 26074329 26074421 + 23 NA promoter-TSS (FBgn0051023) tRNA-promoter-TSS (FBgn0051023) 42 FBgn0051023 FBgn0051023 FBtr0085636 tRNA:CR31023 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10359 chr3R 11593711 11593782 + 23 NA promoter-TSS (FBgn0038357) protein_coding-promoter-TSS (FBgn0038357) -586 FBgn0038357 FBgn0038357 FBtr0083197 CG5623 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9124 chr3R 1894852 1894989 + 23 NA Intergenic Intergenic 9085 FBgn0037399 FBgn0037399 FBtr0078620 Or83c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10265 chr3R 10973323 10973428 + 23 NA promoter-TSS (FBgn0038293) protein_coding-promoter-TSS (FBgn0038293) -546 FBgn0038293 FBgn0038293 FBtr0083037 CG6904 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9645 chr3R 5892485 5892702 + 23 NA exon (FBgn0053783, exon 2 of 4) protein_coding-exon (FBgn0053783, exon 2 of 4) 101 FBgn0053783 FBgn0053783 FBtr0091784 CG33783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13043 chrU 37854 38073 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3618 chr2L 22091927 22092368 + 23 NA Intergenic Intergenic 12254 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3152 chr2L 20085364 20085455 + 23 NA promoter-TSS (FBgn0263773) protein_coding-promoter-TSS (FBgn0263773) -5213 FBgn0263773 FBgn0263773 FBtr0310558 fok protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12787 chr3R 27678238 27678452 + 23 NA exon (FBgn0011224, exon 12 of 14) protein_coding-exon (FBgn0011224, exon 12 of 14) 26779 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8425 chr3L 17679577 17679631 + 23 NA Intergenic Intergenic -3511 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12783 chr3R 27662677 27662897 + 23 NA exon (FBgn0039883, exon 8 of 8) protein_coding-exon (FBgn0039883, exon 8 of 8) 11221 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_903 chr2L 6602726 6602874 + 23 NA Intergenic Intergenic -1734 FBgn0031835 FBgn0031835 FBtr0089641 CG11319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4407 chr2R 5226386 5226650 + 23 NA intron (FBgn0033403, intron 2 of 3) protein_coding-intron (FBgn0033403, intron 2 of 3) -6336 FBgn0033404 FBgn0033404 FBtr0088503 Or45a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2803 chr2L 17970249 17970478 + 23 NA exon (FBgn0023096, exon 16 of 25) protein_coding-exon (FBgn0023096, exon 16 of 25) 6949 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10794 chr3R 14343682 14343753 + 23 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 27591 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3156 chr2L 20118629 20118683 + 23 NA Intergenic Intergenic -14566 FBgn0032851 FBgn0032851 FBtr0089388 CG13970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5109 chr2R 10753019 10753073 + 23 NA exon (FBgn0022063, exon 7 of 12) protein_coding-exon (FBgn0022063, exon 7 of 12) -4796 FBgn0053505 FBgn0053505 FBtr0091445 U3-55K protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9915 chr3R 8101570 8102009 + 23 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) 2941 FBgn0259975 FBgn0259975 FBtr0300319 Sfp87B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11832 chr3R 23210080 23210134 + 23 NA exon (FBgn0016061, exon 15 of 17) protein_coding-exon (FBgn0016061, exon 15 of 17) -14520 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2418 chr2L 16099515 16099763 + 23 NA Intergenic Intergenic 4630 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_599 chr2L 4175770 4175834 + 23 NA Intergenic Intergenic -9668 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10798 chr3R 14350258 14350312 + 23 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 21023 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2752 chr2L 17796774 17796952 + 23 NA exon (FBgn0262018, exon 10 of 14) protein_coding-exon (FBgn0262018, exon 10 of 14) 4451 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3929 chr2R 595191 595274 + 23 NA intron (FBgn0026401, intron 12 of 23) protein_coding-intron (FBgn0026401, intron 11 of 22) 21283 FBgn0026401 FBgn0026401 FBtr0111118 Nipped-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7146 chr3L 6068599 6068659 + 23 NA promoter-TSS (FBgn0035675) protein_coding-promoter-TSS (FBgn0035675) -7 FBgn0035675 FBgn0035675 FBtr0332059 CG6610 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12430 chr3R 25538225 25538297 + 23 NA Intergenic Intergenic -2000 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5158 chr2R 11125188 11125257 + 23 NA intron (FBgn0259878, intron 2 of 8) protein_coding-intron (FBgn0259878, intron 2 of 8) 3862 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7249 chr3L 6938252 6938420 + 23 NA intron (FBgn0035719, intron 2 of 6) protein_coding-intron (FBgn0035719, intron 1 of 5) 2380 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9583 chr3R 5147694 5147758 + 23 NA exon (FBgn0037675, exon 1 of 1) protein_coding-exon (FBgn0037675, exon 1 of 1) 234 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8927 chr3LHet 2418331 2418393 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6506 chr2RHet 1755814 1755905 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_152 chr2L 1028329 1028383 + 23 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) -1466 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11719 chr3R 22595096 22595150 + 23 NA Intergenic Intergenic 14807 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7268 chr3L 7006001 7006267 + 23 NA exon (FBgn0260660, exon 4 of 22) protein_coding-exon (FBgn0260660, exon 4 of 22) 13760 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5577 chr2R 15097228 15097282 + 23 NA intron (FBgn0263395, intron 2 of 14) protein_coding-intron (FBgn0263395, intron 2 of 14) -17580 FBgn0034422 FBgn0034422 FBtr0086505 CG7137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3701 chr2L 22348470 22348754 + 23 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -5743 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10613 chr3R 13185004 13185408 + 23 NA intron (FBgn0038498, intron 1 of 6) protein_coding-intron (FBgn0038498, intron 1 of 6) 6633 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13260 chrU 5601518 5601736 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13763 chrX 16043160 16043313 + 23 NA promoter-TSS (FBgn0042650) protein_coding-promoter-TSS (FBgn0042650) -24871 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6706 chr3L 328045 328141 + 23 NA promoter-TSS (FBgn0052343) protein_coding-promoter-TSS (FBgn0052343) -4 FBgn0261985 FBgn0261985 FBtr0306559 Ptpmeg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6583 chr2RHet 1989710 1990079 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_776 chr2L 5554082 5554195 + 23 NA promoter-TSS (FBgn0004620) protein_coding-promoter-TSS (FBgn0004620) 241 FBgn0031721 FBgn0031721 FBtr0079104 CG14017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4036 chr2R 2049695 2049749 + 23 NA promoter-TSS (FBgn0011932) tRNA-promoter-TSS (FBgn0011932) 20 FBgn0011932 FBgn0011932 FBtr0085981 tRNA:N5:42Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_1614 chr2L 12160794 12160848 + 23 NA promoter-TSS (FBgn0051861) protein_coding-promoter-TSS (FBgn0051861) -974 FBgn0051861 FBgn0051861 FBtr0302986 CG31861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1126 chr2L 8619516 8619570 + 23 NA promoter-TSS (FBgn0051602) tRNA-promoter-TSS (FBgn0051602) -485 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_178 chr2L 1211669 1211789 + 23 NA Intergenic Intergenic 6056 FBgn0262944 FBgn0262944 FBtr0306546 CR43263 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7598 chr3L 10712571 10712772 + 23 NA Intergenic Intergenic -22694 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4091 chr2R 2798646 2798720 + 23 NA intron (FBgn0050158, intron 5 of 7) protein_coding-intron (FBgn0050158, intron 5 of 7) -12268 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13246 chrU 3550192 3550250 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5624 chr2R 15542927 15543125 + 23 NA Intergenic Intergenic -2237 FBgn0034463 FBgn0034463 FBtr0086471 CG15125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9562 chr3R 5116664 5116754 + 23 NA Intergenic Intergenic 23955 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7158 chr3L 6132607 6132668 + 23 NA exon (FBgn0052405, exon 2 of 2) protein_coding-exon (FBgn0052405, exon 2 of 2) 437 FBgn0052405 FBgn0052405 FBtr0077024 Cpr65Av protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1971 chr2L 14419096 14419192 + 23 NA Intergenic Intergenic -1826 FBgn0032546 FBgn0032546 FBtr0080634 pburs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3614 chr2L 22084993 22085196 + 23 NA Intergenic Intergenic 5422 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13083 chrU 171595 171898 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6646 chr2RHet 2316395 2316467 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12095 chr3R 24242870 24243057 + 23 NA promoter-TSS (FBgn0039584) protein_coding-promoter-TSS (FBgn0039584) -967 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4383 chr2R 4958870 4959201 + 23 NA intron (FBgn0011746, intron 1 of 4) protein_coding-intron (FBgn0011746, intron 1 of 4) 2429 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_550 chr2L 3751841 3751980 + 23 NA exon (FBgn0031568, exon 12 of 12) protein_coding-exon (FBgn0031568, exon 12 of 12) -5346 FBgn0263846 FBgn0263846 FBtr0321309 CG43707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2438 chr2L 16211720 16211930 + 23 NA exon (FBgn0028893, exon 1 of 3) protein_coding-exon (FBgn0028893, exon 1 of 3) 366 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12135 chr3R 24386864 24387087 + 23 NA Intergenic Intergenic -16451 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11499 chr3R 21745694 21745883 + 23 NA TTS (FBgn0039395) protein_coding-TTS (FBgn0039395) 2431 FBgn0039395 FBgn0039395 FBtr0084984 CG14546 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12717 chr3R 27297043 27297097 + 23 NA Intergenic Intergenic 8003 FBgn0039850 FBgn0039850 FBtr0085789 CG11333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1553 chr2L 11561325 11561439 + 23 NA Intergenic Intergenic 25237 FBgn0263386 FBgn0263386 FBtr0309073 CG43438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4462 chr2R 5651918 5651978 + 23 NA exon (FBgn0005614, exon 13 of 14) protein_coding-exon (FBgn0005614, exon 13 of 14) -6375 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_382 chr2L 2317678 2317732 + 23 NA intron (FBgn0031414, intron 1 of 13) protein_coding-intron (FBgn0031413, intron 2 of 5) 6025 FBgn0031414 FBgn0031414 FBtr0330694 eys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12994 chr4 966968 967083 + 23 NA exon (FBgn0019985, exon 9 of 9) protein_coding-exon (FBgn0019985, exon 9 of 9) 9580 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10689 chr3R 13684900 13685054 + 23 NA intron (FBgn0261649, intron 6 of 9) protein_coding-intron (FBgn0261649, intron 6 of 9) -47209 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1630 chr2L 12319778 12319868 + 23 NA Intergenic Intergenic -19025 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6842 chr3L 1524666 1524720 + 23 NA exon (FBgn0035227, exon 17 of 22) protein_coding-exon (FBgn0035227, exon 17 of 22) 6566 FBgn0053971 FBgn0053971 FBtr0100014 Ir62a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10651 chr3R 13450515 13450569 + 23 NA promoter-TSS (FBgn0038530) protein_coding-promoter-TSS (FBgn0038530) 59 FBgn0011994 FBgn0011994 FBtr0083496 tRNA:T:90Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_9435 chr3R 4012198 4012268 + 23 NA Intergenic Intergenic -5069 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7144 chr3L 6047942 6047996 + 23 NA promoter-TSS (FBgn0028980) protein_coding-promoter-TSS (FBgn0028980) -267 FBgn0028980 FBgn0028980 FBtr0077043 tan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4325 chr2R 4702692 4702747 + 23 NA intron (FBgn0024189, intron 2 of 21) protein_coding-intron (FBgn0024189, intron 2 of 20) -11177 FBgn0050350 FBgn0050350 FBtr0088636 CG30350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12313 chr3R 25203104 25203306 + 23 NA exon (FBgn0004369, exon 1 of 19) protein_coding-exon (FBgn0004369, exon 1 of 19) -57869 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3416 chr2L 21611897 21612032 + 23 NA Intergenic Intergenic 6810 FBgn0032955 FBgn0032955 FBtr0100511 CG2201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1871 chr2L 14038115 14038169 + 23 NA Intergenic Intergenic -2028 FBgn0028875 FBgn0028875 FBtr0309867 nAcRalpha-34E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4223 chr2R 3921927 3922360 + 23 NA intron (FBgn0025360, intron 3 of 3) protein_coding-intron (FBgn0025360, intron 3 of 3) 3354 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4659 chr2R 7287343 7287414 + 23 NA promoter-TSS (FBgn0050506) tRNA-promoter-TSS (FBgn0050506) -32 FBgn0050506 FBgn0050506 FBtr0088145 tRNA:CR30506 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11113 chr3R 16358877 16358948 + 23 NA Intergenic Intergenic 1514 FBgn0262146 FBgn0262146 FBtr0304129 MtnE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13848 chrX 21245223 21245277 + 23 NA promoter-TSS (FBgn0003423) protein_coding-promoter-TSS (FBgn0003423) -1200 FBgn0003423 FBgn0003423 FBtr0077207 slgA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2509 chr2L 16707666 16707786 + 23 NA intron (FBgn0062978, intron 1 of 1) protein_coding-intron (FBgn0062978, intron 1 of 1) -4529 FBgn0263745 FBgn0263745 FBtr0310392 CR43670 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_13150 chrU 1209028 1209083 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12938 chr4 552200 552288 + 23 NA exon (FBgn0004607, exon 9 of 14) protein_coding-exon (FBgn0004607, exon 9 of 14) 26236 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13326 chrUextra 814465 814590 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5827 chr2R 17243390 17243444 + 23 NA exon (FBgn0000395, exon 7 of 7) protein_coding-exon (FBgn0000395, exon 7 of 7) -5068 FBgn0034624 FBgn0034624 FBtr0071611 CG17974 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11433 chr3R 20554852 20554910 + 23 NA intron (FBgn0004885, intron 2 of 13) protein_coding-intron (FBgn0004885, intron 2 of 13) 5333 FBgn0086059 FBgn0086059 FBtr0114335 snoRNA:Me18S-C1280 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_11488 chr3R 21706527 21706632 + 23 NA intron (FBgn0027865, intron 1 of 4) protein_coding-intron (FBgn0027865, intron 1 of 4) 583 FBgn0027865 FBgn0027865 FBtr0330163 Tsp96F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7372 chr3L 8164316 8164370 + 23 NA exon (FBgn0040290, exon 5 of 6) protein_coding-exon (FBgn0040290, exon 5 of 6) 4735 FBgn0040290 FBgn0040290 FBtr0076729 RecQ4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3722 chr2L 22421073 22421143 + 23 NA Intergenic Intergenic 7217 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5372 chr2R 13217611 13217665 + 23 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -22831 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6739 chr3L 619743 620283 + 23 NA TTS (FBgn0263042) protein_coding-TTS (FBgn0263042) 2303 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7051 chr3L 4481011 4481080 + 23 NA exon (FBgn0035551, exon 2 of 2) protein_coding-exon (FBgn0035551, exon 2 of 2) 762 FBgn0035551 FBgn0035551 FBtr0073306 CG7465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1893 chr2L 14151246 14151307 + 23 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 11946 FBgn0263037 FBgn0263037 FBtr0306928 CG43332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_319 chr2L 1623248 1623395 + 23 NA Intergenic Intergenic -9139 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6330 chr2RHet 306319 306373 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2465 chr2L 16420024 16420092 + 23 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -2174 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_468 chr2L 3099343 3099398 + 23 NA intron (FBgn0015600, intron 2 of 8) protein_coding-intron (FBgn0015600, intron 4 of 10) 8772 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3764 chr2L 22591861 22591977 + 23 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 52608 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11622 chr3R 22219281 22219348 + 23 NA Intergenic Intergenic 10064 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8112 chr3L 15047135 15047189 + 23 NA promoter-TSS (FBgn0036470) protein_coding-promoter-TSS (FBgn0036470) 73 FBgn0036469 FBgn0036469 FBtr0075663 CG18649 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2231 chr2L 15385998 15386052 + 23 NA Intergenic Intergenic -24398 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_645 chr2L 4435922 4436106 + 23 NA TTS (FBgn0085206) protein_coding-TTS (FBgn0085206) -1773 FBgn0262358 FBgn0262358 FBtr0304638 CG43056 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6936 chr3L 2632975 2633033 + 23 NA intron (FBgn0035357, intron 1 of 7) protein_coding-intron (FBgn0035357, intron 2 of 8) 1289 FBgn0035357 FBgn0035357 FBtr0072936 MEP-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12855 chr3RHet 1102773 1102827 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11397 chr3R 19748073 19748184 + 23 NA promoter-TSS (FBgn0051141) protein_coding-promoter-TSS (FBgn0051141) 567 FBgn0016754 FBgn0016754 FBtr0330380 sba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8903 chr3LHet 1401772 1401826 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6183 chr2R 20225131 20225235 + 23 NA Intergenic Intergenic -3354 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2069 chr2L 14743419 14743594 + 23 NA promoter-TSS (FBgn0261567) protein_coding-promoter-TSS (FBgn0261567) 253 FBgn0085195 FBgn0085195 FBtr0301737 CG34166 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4044 chr2R 2076652 2076706 + 23 NA TTS (FBgn0011935) tRNA-TTS (FBgn0011935) 1028 FBgn0011935 FBgn0011935 FBtr0086004 tRNA:N5:42Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_6694 chr2RHet 3238032 3238594 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10060 chr3R 9232507 9232570 + 23 NA exon (FBgn0038151, exon 2 of 3) protein_coding-exon (FBgn0038151, exon 2 of 3) 151 FBgn0038151 FBgn0038151 FBtr0302576 yellow-e2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4261 chr2R 4256843 4256904 + 23 NA exon (FBgn0033286, exon 1 of 1) protein_coding-exon (FBgn0033286, exon 1 of 1) 608 FBgn0033286 FBgn0033286 FBtr0088766 CG2127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7569 chr3L 10594927 10595246 + 23 NA Intergenic Intergenic 21590 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1824 chr2L 13669715 13669769 + 23 NA exon (FBgn0028527, exon 5 of 5) protein_coding-exon (FBgn0028527, exon 5 of 5) 4217 FBgn0028527 FBgn0028527 FBtr0080527 CG18507 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10198 chr3R 10314477 10314545 + 23 NA Intergenic Intergenic -7101 FBgn0086901 FBgn0086901 FBtr0112631 cv-c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10142 chr3R 9770818 9770872 + 23 NA exon (FBgn0038189, exon 2 of 2) protein_coding-exon (FBgn0038189, exon 2 of 2) 689 FBgn0038189 FBgn0038189 FBtr0082878 Art6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_311 chr2L 1601819 1601873 + 23 NA exon (FBgn0261509, exon 4 of 11) protein_coding-exon (FBgn0261509, exon 4 of 11) 9279 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9092 chr3R 1634699 1634753 + 23 NA TTS (FBgn0263353) protein_coding-TTS (FBgn0263353) -4818 FBgn0261561 FBgn0261561 FBtr0302726 CG42675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12948 chr4 621671 621725 + 23 NA exon (FBgn0028996, exon 4 of 4) protein_coding-exon (FBgn0028996, exon 4 of 4) 6653 FBgn0028996 FBgn0028996 FBtr0089104 onecut protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11900 chr3R 23476303 23476357 + 23 NA TTS (FBgn0051057) protein_coding-TTS (FBgn0051057) 104 FBgn0051058 FBgn0051058 FBtr0085198 CG31058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4847 chr2R 8665956 8666308 + 23 NA Intergenic Intergenic -1917 FBgn0003326 FBgn0003326 FBtr0087855 sca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_17 chr2L 264673 264823 + 23 NA exon (FBgn0031239, exon 1 of 1) protein_coding-exon (FBgn0031239, exon 1 of 1) 2757 FBgn0031239 FBgn0031239 FBtr0078142 CG17075 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13226 chrU 2474036 2474361 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9494 chr3R 4468455 4468520 + 23 NA promoter-TSS (FBgn0012027) tRNA-promoter-TSS (FBgn0012027) 28 FBgn0012027 FBgn0012027 FBtr0081894 tRNA:Y1:85Ad tRNA Nup98-S2-pascual-garcia2017_R1_peak_6865 chr3L 1822475 1822747 + 23 NA TTS (FBgn0027790) protein_coding-TTS (FBgn0027790) 6331 FBgn0035279 FBgn0035279 FBtr0299561 Cpr62Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2923 chr2L 18735896 18736045 + 23 NA Intergenic Intergenic 4036 FBgn0261806 FBgn0261806 FBtr0303282 CG42752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8886 chr3LHet 1149727 1149782 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3035 chr2L 19475652 19475751 + 23 NA Intergenic Intergenic -4074 FBgn0264391 FBgn0264391 FBtr0332319 CR43839 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12093 chr3R 24229468 24229844 + 23 NA Intergenic Intergenic -14274 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3665 chr2L 22226496 22226649 + 23 NA exon (FBgn0042701, exon 1 of 1) pseudogene-exon (FBgn0042701, exon 1 of 1) 421 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7091 chr3L 5379927 5379981 + 23 NA Intergenic Intergenic -4033 FBgn0035604 FBgn0035604 FBtr0077153 Ir64a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5269 chr2R 12249529 12249583 + 23 NA exon (FBgn0034121, exon 4 of 4) protein_coding-exon (FBgn0034121, exon 4 of 4) 425 FBgn0034121 FBgn0034121 FBtr0087153 CG6262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6498 chr2RHet 1715295 1715349 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6665 chr2RHet 2446947 2447024 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5795 chr2R 16985600 16985685 + 23 NA promoter-TSS (FBgn0011824) protein_coding-promoter-TSS (FBgn0011824) 25 FBgn0085425 FBgn0085425 FBtr0112645 CG34396 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8096 chr3L 14916853 14916934 + 23 NA intron (FBgn0259099, intron 1 of 10) protein_coding-intron (FBgn0259099, intron 1 of 10) 19988 FBgn0259099 FBgn0259099 FBtr0330139 DCX-EMAP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4564 chr2R 6325412 6325478 + 23 NA promoter-TSS (FBgn0001122) protein_coding-promoter-TSS (FBgn0001122) -552 FBgn0033523 FBgn0033523 FBtr0088314 CG12895 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9635 chr3R 5798294 5798366 + 23 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 13452 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4809 chr2R 8222473 8222597 + 23 NA promoter-TSS (FBgn0033715) protein_coding-promoter-TSS (FBgn0033715) 36 FBgn0050251 FBgn0050251 FBtr0087961 tRNA:CR30251 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9664 chr3R 6064726 6064783 + 23 NA intron (FBgn0261928, intron 1 of 9) protein_coding-intron (FBgn0261928, intron 2 of 9) -12487 FBgn0037801 FBgn0037801 FBtr0082225 CG3999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4207 chr2R 3888673 3888853 + 23 NA exon (FBgn0033249, exon 2 of 2) protein_coding-exon (FBgn0033249, exon 2 of 2) 862 FBgn0033249 FBgn0033249 FBtr0088868 CG11191 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7830 chr3L 12755236 12755290 + 23 NA exon (FBgn0052113, exon 13 of 19) protein_coding-exon (FBgn0052113, exon 13 of 19) 7114 FBgn0052113 FBgn0052113 FBtr0273390 CG32113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4411 chr2R 5239115 5239359 + 23 NA promoter-TSS (FBgn0033403) protein_coding-promoter-TSS (FBgn0033403) -77 FBgn0033403 FBgn0033403 FBtr0088558 CG13739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3681 chr2L 22293482 22293567 + 23 NA Intergenic Intergenic 43646 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3484 chr2L 21839584 21839716 + 23 NA Intergenic Intergenic 11057 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4057 chr2R 2454557 2454626 + 23 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) -33491 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3259 chr2L 20600784 20600838 + 23 NA Intergenic Intergenic 3385 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_872 chr2L 6315858 6315996 + 23 NA intron (FBgn0053531, intron 15 of 17) protein_coding-intron (FBgn0053531, intron 15 of 17) 7108 FBgn0260452 FBgn0260452 FBtr0079247 CG13984 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7650 chr3L 11359741 11359842 + 23 NA Intergenic Intergenic -1806 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5695 chr2R 16037782 16037974 + 23 NA Intergenic Intergenic 4240 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11041 chr3R 15962694 15962760 + 23 NA Intergenic Intergenic 2916 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8209 chr3L 16053917 16053975 + 23 NA intron (FBgn0005536, intron 2 of 17) protein_coding-intron (FBgn0005536, intron 2 of 15) 8887 FBgn0005536 FBgn0005536 FBtr0075441 Mbs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1932 chr2L 14319138 14319269 + 23 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -9226 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_150 chr2L 1021449 1021544 + 23 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) 5394 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2659 chr2L 17320593 17320663 + 23 NA Intergenic Intergenic -8808 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2467 chr2L 16422734 16422983 + 23 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -4974 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_13421 chrUextra 28725925 28725979 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_421 chr2L 2679203 2679260 + 23 NA intron (FBgn0051690, intron 1 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) 1498 FBgn0051690 FBgn0051690 FBtr0301682 CG31690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10679 chr3R 13605296 13605350 + 23 NA exon (FBgn0262562, exon 4 of 17) protein_coding-exon (FBgn0262562, exon 4 of 17) 14973 FBgn0262562 FBgn0262562 FBtr0305013 CG43102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9192 chr3R 2436671 2436725 + 23 NA Intergenic Intergenic -2062 FBgn0250846 FBgn0250846 FBtr0301286 glob2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3149 chr2L 20054199 20054463 + 23 NA exon (FBgn0032840, exon 3 of 5) protein_coding-exon (FBgn0032840, exon 3 of 5) 6644 FBgn0014127 FBgn0014127 FBtr0081349 barr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1615 chr2L 12162667 12162931 + 23 NA TTS (FBgn0051861) protein_coding-TTS (FBgn0051861) 1004 FBgn0051861 FBgn0051861 FBtr0302986 CG31861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4005 chr2R 1598984 1599074 + 23 NA intron (FBgn0000099, intron 1 of 4) protein_coding-intron (FBgn0000099, intron 4 of 7) 5525 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9157 chr3R 2127056 2127110 + 23 NA promoter-TSS (FBgn0037424) protein_coding-promoter-TSS (FBgn0037424) -445 FBgn0037424 FBgn0037424 FBtr0078607 Osi15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_815 chr2L 5799643 5799705 + 23 NA TTS (FBgn0031739) protein_coding-TTS (FBgn0031739) 2301 FBgn0031739 FBgn0031739 FBtr0332037 CG14005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_999 chr2L 7426624 7426678 + 23 NA promoter-TSS (FBgn0031912) protein_coding-promoter-TSS (FBgn0031912) -351 FBgn0031912 FBgn0031912 FBtr0079445 CG5261 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9646 chr3R 5894817 5895046 + 23 NA TTS (FBgn0053784) protein_coding-TTS (FBgn0053784) 1304 FBgn0053784 FBgn0053784 FBtr0091785 CG33784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5671 chr2R 15885104 15885162 + 23 NA Intergenic Intergenic 2740 FBgn0050212 FBgn0050212 FBtr0086326 tRNA:CR30212 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10521 chr3R 12567945 12568009 + 23 NA exon (FBgn0020556, exon 3 of 3) ncRNA-exon (FBgn0020556, exon 3 of 3) 4131 FBgn0020556 FBgn0020556 FBtr0083344 bxd ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9593 chr3R 5156857 5156936 + 23 NA promoter-TSS (FBgn0037677) protein_coding-promoter-TSS (FBgn0037677) 721 FBgn0037678 FBgn0037678 FBtr0082057 CG16749 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13546 chrX 5454621 5454929 + 23 NA promoter-TSS (FBgn0263512) protein_coding-promoter-TSS (FBgn0263512) -559 FBgn0263512 FBgn0263512 FBtr0100024 Vsx2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2932 chr2L 18760904 18760968 + 23 NA Intergenic Intergenic 12901 FBgn0264348 FBgn0264348 FBtr0332018 CR43804 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4604 chr2R 6741324 6741378 + 23 NA exon (FBgn0050015, exon 1 of 6) protein_coding-exon (FBgn0050015, exon 1 of 6) 304 FBgn0050015 FBgn0050015 FBtr0113357 CG30015 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3183 chr2L 20290815 20291003 + 23 NA Intergenic Intergenic -3798 FBgn0040996 FBgn0040996 FBtr0081351 CG12617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5820 chr2R 17159898 17159974 + 23 NA intron (FBgn0085426, intron 4 of 8) protein_coding-intron (FBgn0085426, intron 4 of 8) -4852 FBgn0050393 FBgn0050393 FBtr0071620 CG30393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13206 chrU 2300890 2301080 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10432 chr3R 11965073 11965127 + 23 NA intron (FBgn0003319, intron 2 of 10) protein_coding-intron (FBgn0003319, intron 2 of 10) 7477 FBgn0038400 FBgn0038400 FBtr0083281 CG5903 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8833 chr3L 24201774 24201869 + 23 NA intron (FBgn0011288, intron 4 of 7) protein_coding-intron (FBgn0011288, intron 4 of 7) -116146 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2185 chr2L 15181075 15181451 + 23 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 19146 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3862 chr2L 22981397 22981460 + 23 NA Intergenic Intergenic 19691 FBgn0262887 FBgn0262887 FBtr0306299 CR43242 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2306 chr2L 15600746 15600818 + 23 NA Intergenic Intergenic 11187 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11818 chr3R 23183311 23183450 + 23 NA intron (FBgn0260487, intron 1 of 6) protein_coding-intron (FBgn0260487, intron 1 of 6) -1732 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7553 chr3L 10398827 10398898 + 23 NA Intergenic Intergenic 6615 FBgn0264722 FBgn0264722 FBtr0334101 CR43990 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11032 chr3R 15910113 15910171 + 23 NA Intergenic Intergenic -1970 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9655 chr3R 5970312 5970501 + 23 NA promoter-TSS (FBgn0086359) protein_coding-promoter-TSS (FBgn0086359) -15 FBgn0086359 FBgn0086359 FBtr0082181 Invadolysin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10756 chr3R 14133980 14134085 + 23 NA intron (FBgn0038603, intron 2 of 7) protein_coding-intron (FBgn0038603, intron 2 of 7) 2596 FBgn0038603 FBgn0038603 FBtr0083592 PKD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8950 chr3R 279183 279252 + 23 NA promoter-TSS (FBgn0051522) protein_coding-promoter-TSS (FBgn0051522) 557 FBgn0263620 FBgn0263620 FBtr0309986 CR43629 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_737 chr2L 5331051 5331113 + 23 NA TTS (FBgn0031701) protein_coding-TTS (FBgn0031701) 1225 FBgn0031701 FBgn0031701 FBtr0307036 TotM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7013 chr3L 3893093 3893280 + 23 NA exon (FBgn0083987, exon 1 of 1) snRNA-exon (FBgn0083987, exon 1 of 1) 144 FBgn0083987 FBgn0083987 FBtr0111039 snRNA:U11 snRNA Nup98-S2-pascual-garcia2017_R1_peak_13318 chrUextra 510986 511056 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4092 chr2R 2801873 2802331 + 23 NA intron (FBgn0050158, intron 5 of 7) protein_coding-intron (FBgn0050158, intron 5 of 7) -8849 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8986 chr3R 686261 686544 + 23 NA intron (FBgn0003002, intron 1 of 2) protein_coding-intron (FBgn0003002, intron 1 of 2) 7867 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9239 chr3R 2655618 2655672 + 23 NA intron (FBgn0003339, intron 2 of 2) protein_coding-intron (FBgn0003339, intron 2 of 2) -6888 FBgn0011904 FBgn0011904 FBtr0081660 tRNA:K5:84ABa tRNA Nup98-S2-pascual-garcia2017_R1_peak_8356 chr3L 17222433 17222493 + 23 NA intron (FBgn0260943, intron 2 of 14) protein_coding-intron (FBgn0260943, intron 2 of 14) 8849 FBgn0260943 FBgn0260943 FBtr0113427 Rbp6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3674 chr2L 22276286 22276872 + 23 NA Intergenic Intergenic 26701 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13069 chrU 128926 128992 + 23 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11933 chr3R 23606979 23607276 + 23 NA exon (FBgn0085382, exon 9 of 12) protein_coding-exon (FBgn0085382, exon 9 of 12) 44865 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5236 chr2R 11904612 11904672 + 23 NA promoter-TSS (FBgn0034067) protein_coding-promoter-TSS (FBgn0034067) 17 FBgn0034066 FBgn0034066 FBtr0087261 CG8397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10111 chr3R 9585980 9586097 + 22 NA exon (FBgn0085412, exon 12 of 13) protein_coding-exon (FBgn0085412, exon 12 of 13) -5459 FBgn0038179 FBgn0038179 FBtr0082825 CG9312 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6461 chr2RHet 1311543 1311606 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12650 chr3R 26997079 26997320 + 22 NA TTS (FBgn0013973) protein_coding-TTS (FBgn0013973) -2374 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13468 chrX 1646756 1646812 + 22 NA intron (FBgn0025391, intron 1 of 5) protein_coding-intron (FBgn0025391, intron 1 of 5) -1730 FBgn0025391 FBgn0025391 FBtr0302028 Scgdelta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13320 chrUextra 548324 548503 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10947 chr3R 15439716 15439776 + 22 NA exon (FBgn0038719, exon 2 of 5) protein_coding-exon (FBgn0038719, exon 2 of 5) 643 FBgn0038719 FBgn0038719 FBtr0083780 CG16727 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10011 chr3R 8797415 8797479 + 22 NA intron (FBgn0038098, intron 1 of 9) protein_coding-intron (FBgn0038098, intron 2 of 10) 402 FBgn0038098 FBgn0038098 FBtr0331429 CG7381 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3117 chr2L 19882606 19882661 + 22 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 9917 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2523 chr2L 16807557 16807785 + 22 NA exon (FBgn0086673, exon 1 of 3) protein_coding-exon (FBgn0086673, exon 1 of 3) 2787 FBgn0086673 FBgn0086673 FBtr0080914 CG13272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_482 chr2L 3259816 3259872 + 22 NA Intergenic Intergenic -9593 FBgn0031513 FBgn0031513 FBtr0301033 CG3347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12671 chr3R 27068377 27068491 + 22 NA exon (FBgn0051005, exon 2 of 8) protein_coding-exon (FBgn0051005, exon 2 of 8) -7431 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2249 chr2L 15430548 15430602 + 22 NA Intergenic Intergenic -2787 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13324 chrUextra 601552 601632 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9737 chr3R 6581036 6581090 + 22 NA TTS (FBgn0051272) protein_coding-TTS (FBgn0051272) 293 FBgn0037829 FBgn0037829 FBtr0082314 CG14691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12845 chr3RHet 788629 788739 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1488 chr2L 11073641 11073695 + 22 NA Intergenic Intergenic -1845 FBgn0263971 FBgn0263971 FBtr0329904 CG43725 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12879 chr3RHet 1761757 1761899 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3403 chr2L 21394680 21394734 + 22 NA Intergenic Intergenic -9408 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1479 chr2L 10874808 10874876 + 22 NA Intergenic Intergenic 4675 FBgn0032311 FBgn0032311 FBtr0080144 CG12517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11500 chr3R 21750597 21750671 + 22 NA exon (FBgn0039396, exon 6 of 7) protein_coding-exon (FBgn0039396, exon 6 of 7) -2415 FBgn0039395 FBgn0039395 FBtr0084984 CG14546 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3324 chr2L 20997251 20997305 + 22 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -28311 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10348 chr3R 11559907 11559961 + 22 NA Intergenic Intergenic 2466 FBgn0085303 FBgn0085303 FBtr0112469 CG34274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3889 chr2LHet 286639 286749 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2270 chr2L 15491584 15491638 + 22 NA Intergenic Intergenic 6843 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8633 chr3L 21226636 21226876 + 22 NA intron (FBgn0004865, intron 4 of 6) protein_coding-intron (FBgn0004865, intron 3 of 5) 7047 FBgn0004865 FBgn0004865 FBtr0078307 Eip78C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4823 chr2R 8361934 8362015 + 22 NA promoter-TSS (FBgn0033744) protein_coding-promoter-TSS (FBgn0033744) 25 FBgn0033744 FBgn0033744 FBtr0087936 Dh44-R2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7277 chr3L 7054047 7054101 + 22 NA exon (FBgn0035733, exon 4 of 5) protein_coding-exon (FBgn0035733, exon 4 of 5) -5340 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5810 chr2R 17110580 17110776 + 22 NA exon (FBgn0034606, exon 3 of 8) protein_coding-exon (FBgn0034606, exon 3 of 8) -5394 FBgn0034605 FBgn0034605 FBtr0110814 CG15661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2175 chr2L 15142371 15142502 + 22 NA Intergenic Intergenic -10047 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_12336 chr3R 25281382 25281519 + 22 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -23970 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1737 chr2L 12915365 12915419 + 22 NA exon (FBgn0040508, exon 8 of 12) protein_coding-exon (FBgn0040508, exon 8 of 12) -1422 FBgn0040509 FBgn0040509 FBtr0080414 ACXB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11079 chr3R 16181995 16182085 + 22 NA Intergenic Intergenic -3990 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6164 chr2R 20110828 20110954 + 22 NA intron (FBgn0050419, intron 1 of 1) protein_coding-intron (FBgn0050419, intron 1 of 1) 6420 FBgn0050419 FBgn0050419 FBtr0072275 CG30419 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6012 chr2R 18758771 18758839 + 22 NA promoter-TSS (FBgn0034788) protein_coding-promoter-TSS (FBgn0034788) -13 FBgn0034788 FBgn0034788 FBtr0071899 CG13532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_644 chr2L 4435384 4435582 + 22 NA TTS (FBgn0085206) protein_coding-TTS (FBgn0085206) 1575 FBgn0085207 FBgn0085207 FBtr0112370 CG34178 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12715 chr3R 27293730 27293787 + 22 NA Intergenic Intergenic 4691 FBgn0039850 FBgn0039850 FBtr0085789 CG11333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8162 chr3L 15652781 15652979 + 22 NA promoter-TSS (FBgn0014849) protein_coding-promoter-TSS (FBgn0014849) 73 FBgn0014849 FBgn0014849 FBtr0075574 Eig71Ei protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13594 chrX 7498800 7498922 + 22 NA Intergenic Intergenic -4320 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding Nup98-S2-pascual-garcia2017_R1_peak_797 chr2L 5656729 5656875 + 22 NA intron (FBgn0051646, intron 1 of 12) protein_coding-intron (FBgn0051646, intron 1 of 12) 1751 FBgn0051646 FBgn0051646 FBtr0079114 CG31646 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4803 chr2R 8163012 8163109 + 22 NA TTS (FBgn0000253) protein_coding-TTS (FBgn0000253) 10995 FBgn0000253 FBgn0000253 FBtr0088002 Cam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12693 chr3R 27184187 27184241 + 22 NA intron (FBgn0085376, intron 9 of 16) protein_coding-intron (FBgn0085376, intron 9 of 16) -13935 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6852 chr3L 1665046 1665131 + 22 NA promoter-TSS (FBgn0035254) protein_coding-promoter-TSS (FBgn0035254) -24 FBgn0035253 FBgn0035253 FBtr0072808 CG7971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7212 chr3L 6656350 6656419 + 22 NA TTS (FBgn0035709) protein_coding-TTS (FBgn0035709) 2357 FBgn0035709 FBgn0035709 FBtr0076963 eIF4E-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3965 chr2R 853267 853915 + 22 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 16419 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1135 chr2L 8629769 8629964 + 22 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 9838 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12484 chr3R 25804989 25805056 + 22 NA Intergenic Intergenic -4152 FBgn0039728 FBgn0039728 FBtr0085545 CG7896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2580 chr2L 17022317 17022387 + 22 NA Intergenic Intergenic -9298 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12644 chr3R 26983556 26983622 + 22 NA TTS (FBgn0086704) protein_coding-TTS (FBgn0086704) 11236 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5201 chr2R 11545363 11545614 + 22 NA TTS (FBgn0262403) pre_miRNA-TTS (FBgn0262403) 861 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7284 chr3L 7158514 7158612 + 22 NA exon (FBgn0263218, exon 16 of 21) protein_coding-exon (FBgn0263218, exon 16 of 21) 7363 FBgn0040837 FBgn0040837 FBtr0273402 CG8620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1379 chr2L 9800624 9800705 + 22 NA intron (FBgn0032151, intron 10 of 13) protein_coding-intron (FBgn0032151, intron 10 of 13) -7557 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5382 chr2R 13273911 13273967 + 22 NA Intergenic Intergenic 5411 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8174 chr3L 15795407 15795545 + 22 NA Intergenic Intergenic -5946 FBgn0036531 FBgn0036531 FBtr0075502 CG6244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8885 chr3LHet 1146368 1146422 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13611 chrX 8544862 8545156 + 22 NA promoter-TSS (FBgn0004102) protein_coding-promoter-TSS (FBgn0004102) -295 FBgn0004102 FBgn0004102 FBtr0331305 oc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1947 chr2L 14362016 14362084 + 22 NA promoter-TSS (FBgn0015546) protein_coding-promoter-TSS (FBgn0015546) -19 FBgn0015546 FBgn0015546 FBtr0080630 spel1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1616 chr2L 12176881 12176946 + 22 NA exon (FBgn0032422, exon 2 of 3) protein_coding-exon (FBgn0032422, exon 2 of 3) 839 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6883 chr3L 1999156 1999230 + 22 NA Intergenic Intergenic 6458 FBgn0262030 FBgn0262030 FBtr0303925 CG42841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_425 chr2L 2698059 2698113 + 22 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) -1649 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9985 chr3R 8662379 8662544 + 22 NA Intergenic Intergenic 11680 FBgn0038087 FBgn0038087 FBtr0302367 beat-Va protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6390 chr2RHet 662873 662941 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8246 chr3L 16311349 16311417 + 22 NA TTS (FBgn0036605) protein_coding-TTS (FBgn0036605) 259 FBgn0042201 FBgn0042201 FBtr0075369 Nplp3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3641 chr2L 22192585 22192809 + 22 NA intron (FBgn0259683, intron 5 of 6) protein_coding-intron (FBgn0259683, intron 5 of 6) 17282 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3948 chr2R 827980 828101 + 22 NA Intergenic Intergenic -9132 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3813 chr2L 22707148 22707202 + 22 NA Intergenic Intergenic -16167 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3789 chr2L 22638185 22638258 + 22 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 6306 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1958 chr2L 14386474 14386596 + 22 NA Intergenic Intergenic -5365 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12230 chr3R 24760963 24761103 + 22 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 12267 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3566 chr2L 22011257 22011371 + 22 NA Intergenic Intergenic -3917 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3238 chr2L 20539585 20539650 + 22 NA Intergenic Intergenic -22807 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_9939 chr3R 8360186 8360240 + 22 NA intron (FBgn0250910, intron 2 of 7) protein_coding-intron (FBgn0250910, intron 2 of 9) 8303 FBgn0028374 FBgn0028374 FBtr0082639 hug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2048 chr2L 14635396 14635547 + 22 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 19202 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12411 chr3R 25524735 25524956 + 22 NA Intergenic Intergenic 6532 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6399 chr2RHet 705466 705522 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5758 chr2R 16634988 16635365 + 22 NA intron (FBgn0040726, intron 7 of 7) protein_coding-intron (FBgn0040726, intron 7 of 7) -3276 FBgn0085230 FBgn0085230 FBtr0112394 CG34201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8354 chr3L 17204933 17204987 + 22 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 26352 FBgn0260943 FBgn0260943 FBtr0113427 Rbp6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_910 chr2L 6700345 6700404 + 22 NA exon (FBgn0031850, exon 5 of 11) protein_coding-exon (FBgn0031850, exon 5 of 11) -10981 FBgn0031850 FBgn0031850 FBtr0079314 Tsp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1535 chr2L 11402337 11402391 + 22 NA Intergenic Intergenic -10066 FBgn0263764 FBgn0263764 FBtr0333747 CG43681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4557 chr2R 6268515 6268569 + 22 NA promoter-TSS (FBgn0033515) protein_coding-promoter-TSS (FBgn0033515) -928 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13664 chrX 12405045 12405118 + 22 NA intron (FBgn0030396, intron 1 of 3) protein_coding-intron (FBgn0030396, intron 1 of 3) 13347 FBgn0086047 FBgn0086047 FBtr0114323 snoRNA:Me18S-G894 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7167 chr3L 6234807 6234861 + 22 NA exon (FBgn0004513, exon 10 of 12) protein_coding-exon (FBgn0004513, exon 10 of 12) -2743 FBgn0035695 FBgn0035695 FBtr0332068 CG10226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6607 chr2RHet 2143521 2143815 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8281 chr3L 16581267 16581386 + 22 NA promoter-TSS (FBgn0002283) protein_coding-promoter-TSS (FBgn0002283) -331 FBgn0002283 FBgn0002283 FBtr0307336 l(3)73Ah protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7366 chr3L 8064964 8065099 + 22 NA exon (FBgn0262579, exon 2 of 12) protein_coding-exon (FBgn0262579, exon 2 of 12) 979 FBgn0262579 FBgn0262579 FBtr0304994 Ect4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3571 chr2L 22017923 22017977 + 22 NA TTS (FBgn0051693) protein_coding-TTS (FBgn0051693) -1366 FBgn0053987 FBgn0053987 FBtr0100032 CR33987 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4590 chr2R 6603965 6604020 + 22 NA exon (FBgn0024836, exon 3 of 4) protein_coding-exon (FBgn0024836, exon 3 of 4) -8783 FBgn0033542 FBgn0033542 FBtr0088215 CG12309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12962 chr4 734869 734933 + 22 NA exon (FBgn0005558, exon 4 of 8) protein_coding-exon (FBgn0005558, exon 4 of 8) 9198 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4229 chr2R 3955428 3955494 + 22 NA promoter-TSS (FBgn0020279) protein_coding-promoter-TSS (FBgn0020279) 1 FBgn0020279 FBgn0020279 FBtr0100575 lig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5336 chr2R 12779377 12779434 + 22 NA intron (FBgn0025833, intron 2 of 5) protein_coding-intron (FBgn0025833, intron 2 of 5) 3395 FBgn0262307 FBgn0262307 FBtr0304461 mir-990 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13601 chrX 7988071 7988126 + 22 NA promoter-TSS (FBgn0029996) protein_coding-promoter-TSS (FBgn0029996) -1973 FBgn0029996 FBgn0029996 FBtr0071114 Ubc-E2H protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10879 chr3R 15002797 15002851 + 22 NA TTS (FBgn0038686) protein_coding-TTS (FBgn0038686) 102 FBgn0038685 FBgn0038685 FBtr0083734 CG14282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13636 chrX 9756619 9756854 + 22 NA Intergenic Intergenic -2515 FBgn0019929 FBgn0019929 FBtr0071387 Ser7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12828 chr3RHet 212264 212318 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5165 chr2R 11268908 11268962 + 22 NA promoter-TSS (FBgn0026370) protein_coding-promoter-TSS (FBgn0026370) -470 FBgn0000996 FBgn0000996 FBtr0087387 dup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4569 chr2R 6430932 6431025 + 22 NA promoter-TSS (FBgn0005630) protein_coding-promoter-TSS (FBgn0005630) -6203 FBgn0263483 FBgn0263483 FBtr0309782 snoRNA:lola-d snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3520 chr2L 21919670 21920010 + 22 NA Intergenic Intergenic 3479 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9095 chr3R 1673021 1673464 + 22 NA TTS (FBgn0037387) protein_coding-TTS (FBgn0037387) 300 FBgn0037388 FBgn0037388 FBtr0078645 CG14676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10760 chr3R 14148439 14148563 + 22 NA intron (FBgn0051235, intron 3 of 4) protein_coding-intron (FBgn0051235, intron 3 of 4) 6160 FBgn0051235 FBgn0051235 FBtr0083588 CG31235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4284 chr2R 4421412 4421959 + 22 NA Intergenic Intergenic -1886 FBgn0050361 FBgn0050361 FBtr0088756 mtt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4379 chr2R 4953112 4953307 + 22 NA Intergenic Intergenic -3397 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9416 chr3R 3892702 3892899 + 22 NA intron (FBgn0037546, intron 1 of 3) protein_coding-intron (FBgn0037546, intron 1 of 3) 7794 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9152 chr3R 2115042 2115111 + 22 NA exon (FBgn0037421, exon 1 of 1) protein_coding-exon (FBgn0037421, exon 1 of 1) 1487 FBgn0037421 FBgn0037421 FBtr0078604 CG15594 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10903 chr3R 15192380 15192440 + 22 NA Intergenic Intergenic 8061 FBgn0038697 FBgn0038697 FBtr0083775 CG3581 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11462 chr3R 21254027 21254081 + 22 NA intron (FBgn0004509, intron 1 of 9) protein_coding-intron (FBgn0004509, intron 2 of 11) -27687 FBgn0051439 FBgn0051439 FBtr0084845 Muc96D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13802 chrX 18186304 18186374 + 22 NA Intergenic Intergenic 15073 FBgn0053542 FBgn0053542 FBtr0113465 upd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13684 chrX 12765059 12765115 + 22 NA intron (FBgn0259171, intron 2 of 9) protein_coding-intron (FBgn0259171, intron 2 of 9) -13332 FBgn0030429 FBgn0030429 FBtr0073699 CG4661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11942 chr3R 23634621 23634697 + 22 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -36152 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7819 chr3L 12678020 12678081 + 22 NA Intergenic Intergenic -8689 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8047 chr3L 14409839 14409893 + 22 NA exon (FBgn0087007, exon 5 of 9) protein_coding-exon (FBgn0087007, exon 5 of 9) 6140 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10116 chr3R 9623954 9624016 + 22 NA promoter-TSS (FBgn0051331) tRNA-promoter-TSS (FBgn0051331) 7 FBgn0051331 FBgn0051331 FBtr0082836 tRNA:CR31331 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5555 chr2R 14896631 14896710 + 22 NA TTS (FBgn0034412) protein_coding-TTS (FBgn0034412) 14469 FBgn0263473 FBgn0263473 FBtr0309772 snoRNA:abba-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5774 chr2R 16788024 16788112 + 22 NA intron (FBgn0015524, intron 2 of 7) protein_coding-intron (FBgn0015524, intron 2 of 7) 2832 FBgn0015524 FBgn0015524 FBtr0110772 otp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2222 chr2L 15333788 15333889 + 22 NA promoter-TSS (FBgn0001981) protein_coding-promoter-TSS (FBgn0001981) -26 FBgn0001981 FBgn0001981 FBtr0080734 esg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13668 chrX 12468972 12469043 + 22 NA intron (FBgn0030400, intron 1 of 3) protein_coding-intron (FBgn0030400, intron 1 of 3) 8219 FBgn0030400 FBgn0030400 FBtr0273245 CG11138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_536 chr2L 3672593 3672679 + 22 NA intron (FBgn0085369, intron 1 of 7) protein_coding-intron (FBgn0085369, intron 1 of 7) -2055 FBgn0261054 FBgn0261054 FBtr0301934 Sfp24Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12917 chr4 167008 167207 + 22 NA Intergenic Intergenic -4283 FBgn0052006 FBgn0052006 FBtr0089170 CG32006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12919 chr4 189983 190177 + 22 NA exon (FBgn0053978, exon 4 of 4) protein_coding-exon (FBgn0053978, exon 4 of 4) 5686 FBgn0053978 FBgn0053978 FBtr0310436 CG33978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12525 chr3R 26314725 26314904 + 22 NA promoter-TSS (FBgn0039779) protein_coding-promoter-TSS (FBgn0039779) 129 FBgn0039778 FBgn0039778 FBtr0085652 Jon99Fi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_554 chr2L 3803849 3804031 + 22 NA intron (FBgn0021800, intron 1 of 3) protein_coding-intron (FBgn0021800, intron 1 of 3) -1759 FBgn0021800 FBgn0021800 FBtr0077498 l(2)k16918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2340 chr2L 15846785 15847022 + 22 NA promoter-TSS (FBgn0264263) ncRNA-promoter-TSS (FBgn0264263) -51 FBgn0264263 FBgn0264263 FBtr0331275 CR43763 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13100 chrU 218107 218279 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11036 chr3R 15931176 15931440 + 22 NA Intergenic Intergenic 2415 FBgn0051206 FBgn0051206 FBtr0083875 CG31206 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12282 chr3R 25020693 25020907 + 22 NA promoter-TSS (FBgn0039647) protein_coding-promoter-TSS (FBgn0039647) -85 FBgn0039647 FBgn0039647 FBtr0113304 CG14509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7782 chr3L 12444346 12444424 + 22 NA Intergenic Intergenic 16736 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6308 chr2RHet 101620 101706 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5402 chr2R 13536612 13536666 + 22 NA exon (FBgn0050106, exon 6 of 8) protein_coding-exon (FBgn0050106, exon 6 of 8) 5162 FBgn0050106 FBgn0050106 FBtr0086893 CCHa1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12160 chr3R 24498082 24498240 + 22 NA TTS (FBgn0039593) protein_coding-TTS (FBgn0039593) 1703 FBgn0039593 FBgn0039593 FBtr0085307 CG9989 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7306 chr3L 7388081 7388279 + 22 NA exon (FBgn0035777, exon 4 of 5) protein_coding-exon (FBgn0035777, exon 4 of 5) -1275 FBgn0052379 FBgn0052379 FBtr0273419 CG32379 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2596 chr2L 17081270 17081339 + 22 NA Intergenic Intergenic -4346 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11477 chr3R 21656495 21656636 + 22 NA promoter-TSS (FBgn0011669) protein_coding-promoter-TSS (FBgn0011669) 71 FBgn0011669 FBgn0011669 FBtr0084915 Mst57Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11779 chr3R 23001817 23001888 + 22 NA intron (FBgn0004197, intron 12 of 14) protein_coding-intron (FBgn0004197, intron 12 of 14) 10412 FBgn0003482 FBgn0003482 FBtr0085116 spn-D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6979 chr3L 3107369 3107423 + 22 NA promoter-TSS (FBgn0035398) protein_coding-promoter-TSS (FBgn0035398) -438 FBgn0035398 FBgn0035398 FBtr0073124 Cht7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10068 chr3R 9269769 9269823 + 22 NA Intergenic Intergenic -4865 FBgn0261814 FBgn0261814 FBtr0303300 CR42756 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9584 chr3R 5148565 5148640 + 22 NA TTS (FBgn0037675) protein_coding-TTS (FBgn0037675) 1110 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1222 chr2L 8829014 8829208 + 22 NA exon (FBgn0029123, exon 1 of 1) protein_coding-exon (FBgn0029123, exon 1 of 1) 3486 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7715 chr3L 11931948 11932086 + 22 NA promoter-TSS (FBgn0036223) protein_coding-promoter-TSS (FBgn0036223) -45 FBgn0036223 FBgn0036223 FBtr0332072 CG14126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_898 chr2L 6576907 6576975 + 22 NA exon (FBgn0031835, exon 8 of 16) protein_coding-exon (FBgn0031835, exon 8 of 16) -10354 FBgn0031834 FBgn0031834 FBtr0079330 CG13766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8843 chr3LHet 15908 15967 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7543 chr3L 10134889 10134945 + 22 NA Intergenic Intergenic 9909 FBgn0086076 FBgn0086076 FBtr0114352 snoRNA:MeU2-A31 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2130 chr2L 14947053 14947135 + 22 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 22359 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8249 chr3L 16333609 16333687 + 22 NA exon (FBgn0036612, exon 2 of 4) protein_coding-exon (FBgn0036612, exon 2 of 4) 1545 FBgn0036612 FBgn0036612 FBtr0110866 CG4998 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10702 chr3R 13741609 13741663 + 22 NA intron (FBgn0053547, intron 1 of 24) protein_coding-intron (FBgn0053547, intron 1 of 26) 664 FBgn0053547 FBgn0053547 FBtr0305019 Rim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3444 chr2L 21738121 21738177 + 22 NA Intergenic Intergenic 19317 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3306 chr2L 20851167 20851241 + 22 NA TTS (FBgn0032894) protein_coding-TTS (FBgn0032894) -1377 FBgn0032895 FBgn0032895 FBtr0081426 CG9335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7478 chr3L 9059113 9059167 + 22 NA promoter-TSS (FBgn0000116) protein_coding-promoter-TSS (FBgn0000116) 6691 FBgn0035959 FBgn0035959 FBtr0331549 CG4911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9325 chr3R 3135451 3135572 + 22 NA promoter-TSS (FBgn0259172) protein_coding-promoter-TSS (FBgn0259172) -392 FBgn0259172 FBgn0259172 FBtr0299637 rn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8090 chr3L 14863807 14863866 + 22 NA exon (FBgn0036454, exon 11 of 19) protein_coding-exon (FBgn0036454, exon 11 of 19) 23680 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12568 chr3R 26698825 26699002 + 22 NA promoter-TSS (FBgn0039806) protein_coding-promoter-TSS (FBgn0039806) -911 FBgn0039806 FBgn0039806 FBtr0085719 CG15545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12692 chr3R 27183072 27183416 + 22 NA exon (FBgn0085376, exon 9 of 17) protein_coding-exon (FBgn0085376, exon 9 of 17) -14905 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_34 chr2L 386974 387187 + 22 NA exon (FBgn0000061, exon 5 of 5) protein_coding-exon (FBgn0000061, exon 5 of 5) 8968 FBgn0000061 FBgn0000061 FBtr0078053 al protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7558 chr3L 10534177 10534231 + 22 NA intron (FBgn0052062, intron 2 of 13) protein_coding-intron (FBgn0052062, intron 2 of 14) 17978 FBgn0036085 FBgn0036085 FBtr0076291 CG6527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2020 chr2L 14562555 14562625 + 22 NA TTS (FBgn0028913) protein_coding-TTS (FBgn0028913) 1136 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4046 chr2R 2080571 2080672 + 22 NA intron (FBgn0262867, intron 1 of 9) protein_coding-intron (FBgn0262867, intron 1 of 9) 2744 FBgn0011934 FBgn0011934 FBtr0085989 tRNA:N5:42Ad tRNA Nup98-S2-pascual-garcia2017_R1_peak_8314 chr3L 16918750 16918812 + 22 NA exon (FBgn0036677, exon 2 of 3) protein_coding-exon (FBgn0036677, exon 2 of 3) 1753 FBgn0036677 FBgn0036677 FBtr0075307 CG13023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_83 chr2L 775916 775970 + 22 NA promoter-TSS (FBgn0040725) protein_coding-promoter-TSS (FBgn0040725) -593 FBgn0040725 FBgn0040725 FBtr0078004 CG13946 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6261 chr2R 20815735 20815953 + 22 NA promoter-TSS (FBgn0060296) protein_coding-promoter-TSS (FBgn0060296) -4725 FBgn0060296 FBgn0060296 FBtr0333814 pain protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10739 chr3R 13979574 13979633 + 22 NA TTS (FBgn0038567) protein_coding-TTS (FBgn0038567) 1761 FBgn0038567 FBgn0038567 FBtr0083546 CG14316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13094 chrU 204818 204878 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1564 chr2L 11726147 11726335 + 22 NA Intergenic Intergenic -12711 FBgn0032373 FBgn0032373 FBtr0080255 Vha100-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8152 chr3L 15507664 15507718 + 22 NA Intergenic Intergenic 2465 FBgn0036503 FBgn0036503 FBtr0075603 CG13454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13346 chrUextra 6346496 6346727 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3262 chr2L 20618412 20618516 + 22 NA promoter-TSS (FBgn0262425) pre_miRNA-promoter-TSS (FBgn0262425) -67 FBgn0262425 FBgn0262425 FBtr0304384 mir-288 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5261 chr2R 12134232 12134315 + 22 NA exon (FBgn0261612, exon 4 of 7) protein_coding-exon (FBgn0261612, exon 4 of 7) -4834 FBgn0034099 FBgn0034099 FBtr0087188 CG15708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_746 chr2L 5391721 5391882 + 22 NA Intergenic Intergenic -10727 FBgn0262097 FBgn0262097 FBtr0310549 CG42850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4012 chr2R 1677114 1677373 + 22 NA Intergenic Intergenic 3229 FBgn0033041 FBgn0033041 FBtr0086052 Or42a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3619 chr2L 22093566 22093802 + 22 NA Intergenic Intergenic 10717 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9302 chr3R 3047424 3047631 + 22 NA Intergenic Intergenic -2100 FBgn0037486 FBgn0037486 FBtr0332537 CG14605 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12566 chr3R 26694153 26694398 + 22 NA exon (FBgn0039805, exon 3 of 3) protein_coding-exon (FBgn0039805, exon 3 of 3) 1030 FBgn0039805 FBgn0039805 FBtr0085710 Cpr100A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11924 chr3R 23583443 23583671 + 22 NA Intergenic Intergenic 21295 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1693 chr2L 12727517 12727572 + 22 NA intron (FBgn0032456, intron 8 of 12) protein_coding-intron (FBgn0032456, intron 7 of 11) 5267 FBgn0032456 FBgn0032456 FBtr0090014 MRP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1794 chr2L 13358956 13359036 + 22 NA TTS (FBgn0032507) protein_coding-TTS (FBgn0032507) 2531 FBgn0032507 FBgn0032507 FBtr0080474 CG9377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13402 chrUextra 26243610 26243752 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7313 chr3L 7455352 7455425 + 22 NA Intergenic Intergenic -3221 FBgn0261536 FBgn0261536 FBtr0302558 CG42660 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9683 chr3R 6267701 6267796 + 22 NA Intergenic Intergenic 7237 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9585 chr3R 5150618 5150675 + 22 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) 3154 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8578 chr3L 20020159 20020216 + 22 NA TTS (FBgn0036932) protein_coding-TTS (FBgn0036932) 748 FBgn0036931 FBgn0036931 FBtr0074907 CG14183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8052 chr3L 14450149 14450302 + 22 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) 46499 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4150 chr2R 3308260 3308315 + 22 NA intron (FBgn0003460, intron 1 of 6) protein_coding-intron (FBgn0003460, intron 1 of 6) 1750 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10450 chr3R 12194870 12194959 + 22 NA promoter-TSS (FBgn0038422) protein_coding-promoter-TSS (FBgn0038422) -888 FBgn0038422 FBgn0038422 FBtr0083321 CG14880 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9533 chr3R 4799676 4799870 + 22 NA Intergenic Intergenic -6811 FBgn0037646 FBgn0037646 FBtr0081958 CAHbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13065 chrU 104300 104608 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12603 chr3R 26810565 26810698 + 22 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) 5097 FBgn0051008 FBgn0051008 FBtr0085748 CG31008 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12467 chr3R 25728983 25729183 + 22 NA TTS (FBgn0051038) protein_coding-TTS (FBgn0051038) 440 FBgn0039718 FBgn0039718 FBtr0085515 CG15517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13412 chrUextra 28220157 28220340 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8592 chr3L 20196447 20196525 + 22 NA TTS (FBgn0036949) protein_coding-TTS (FBgn0036949) 301 FBgn0036948 FBgn0036948 FBtr0074859 CG7298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11656 chr3R 22392616 22392779 + 22 NA exon (FBgn0263289, exon 7 of 23) protein_coding-exon (FBgn0263289, exon 7 of 23) 30625 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12911 chr4 111812 111866 + 22 NA promoter-TSS (FBgn0085432) protein_coding-promoter-TSS (FBgn0085432) 21552 FBgn0085432 FBgn0085432 FBtr0112657 pan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7552 chr3L 10377998 10378086 + 22 NA Intergenic Intergenic 19661 FBgn0262439 FBgn0262439 FBtr0304433 mir-276a pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_9662 chr3R 6030236 6030290 + 22 NA exon (FBgn0025879, exon 5 of 5) protein_coding-exon (FBgn0025879, exon 5 of 5) 8463 FBgn0025879 FBgn0025879 FBtr0082245 Timp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7431 chr3L 8727058 8727112 + 22 NA exon (FBgn0003149, exon 9 of 9) protein_coding-exon (FBgn0003149, exon 9 of 9) 2041 FBgn0000356 FBgn0000356 FBtr0076574 Cp16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3905 chr2R 184736 184849 + 22 NA Intergenic Intergenic -54348 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11093 chr3R 16263495 16263572 + 22 NA exon (FBgn0262869, exon 2 of 20) protein_coding-exon (FBgn0262869, exon 2 of 20) 29546 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10129 chr3R 9693336 9693477 + 22 NA exon (FBgn0008646, exon 4 of 4) protein_coding-exon (FBgn0008646, exon 4 of 4) 7232 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12231 chr3R 24761979 24762130 + 22 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 13288 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_605 chr2L 4233182 4233239 + 22 NA Intergenic Intergenic 5568 FBgn0003941 FBgn0003941 FBtr0077470 RpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5093 chr2R 10629962 10630070 + 22 NA exon (FBgn0033958, exon 4 of 5) protein_coding-exon (FBgn0033958, exon 4 of 5) 2818 FBgn0033958 FBgn0033958 FBtr0087476 CG12858 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_216 chr2L 1348958 1349364 + 22 NA Intergenic Intergenic 3708 FBgn0031332 FBgn0031332 FBtr0077948 CG5556 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8820 chr3L 24118179 24118300 + 22 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 50910 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9084 chr3R 1584682 1584737 + 22 NA promoter-TSS (FBgn0262603) protein_coding-promoter-TSS (FBgn0262603) -10 FBgn0262603 FBgn0262603 FBtr0078677 sec8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8190 chr3L 15987959 15988028 + 22 NA exon (FBgn0036556, exon 6 of 6) protein_coding-exon (FBgn0036556, exon 6 of 6) 6657 FBgn0259824 FBgn0259824 FBtr0330161 Hip14 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13008 chr4 1019770 1019893 + 22 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 9480 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1653 chr2L 12546641 12546748 + 22 NA promoter-TSS (FBgn0259176) protein_coding-promoter-TSS (FBgn0259176) 3518 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9546 chr3R 5062104 5062166 + 22 NA intron (FBgn0003165, intron 1 of 12) protein_coding-intron (FBgn0003165, intron 1 of 12) 3854 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11590 chr3R 22128662 22128758 + 22 NA Intergenic Intergenic 22287 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5984 chr2R 18515343 18515397 + 22 NA exon (FBgn0053143, exon 4 of 8) protein_coding-exon (FBgn0053143, exon 4 of 8) 311 FBgn0053143 FBgn0053143 FBtr0071859 CG33143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6983 chr3L 3216473 3216672 + 22 NA exon (FBgn0035420, exon 6 of 10) protein_coding-exon (FBgn0035420, exon 6 of 10) 2348 FBgn0035420 FBgn0035420 FBtr0302302 CG14967 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10128 chr3R 9685652 9685890 + 22 NA Intergenic Intergenic -4595 FBgn0038186 FBgn0038186 FBtr0082881 CG14362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3671 chr2L 22262660 22262919 + 22 NA Intergenic Intergenic 12911 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12705 chr3R 27203547 27203605 + 22 NA Intergenic Intergenic 5427 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7578 chr3L 10612838 10613040 + 22 NA Intergenic Intergenic 3737 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1152 chr2L 8660810 8660864 + 22 NA intron (FBgn0011259, intron 15 of 20) protein_coding-intron (FBgn0011259, intron 15 of 21) -12315 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1745 chr2L 12942976 12943089 + 22 NA Intergenic Intergenic 17421 FBgn0040506 FBgn0040506 FBtr0310556 ACXE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3581 chr2L 22030869 22031151 + 22 NA Intergenic Intergenic -6850 FBgn0084001 FBgn0084001 FBtr0332199 CG41434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6090 chr2R 19353802 19353864 + 22 NA intron (FBgn0264339, intron 2 of 13) protein_coding-intron (FBgn0264339, intron 2 of 13) 5465 FBgn0034865 FBgn0034865 FBtr0072021 Or59b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6695 chr2RHet 3238773 3239023 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3413 chr2L 21588999 21589104 + 22 NA TTS (FBgn0260719) pseudogene-TTS (FBgn0260719) 304 FBgn0016919 FBgn0016919 FBtr0301173 nompB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13699 chrX 12969573 12969815 + 22 NA exon (FBgn0261388, exon 15 of 15) protein_coding-exon (FBgn0261388, exon 15 of 15) 13530 FBgn0262222 FBgn0262222 FBtr0304282 mir-971 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_514 chr2L 3540187 3540266 + 22 NA intron (FBgn0024244, intron 1 of 2) protein_coding-intron (FBgn0024244, intron 1 of 2) 491 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8666 chr3L 21861152 21861206 + 22 NA intron (FBgn0262737, intron 1 of 10) protein_coding-intron (FBgn0262737, intron 1 of 9) -13914 FBgn0052449 FBgn0052449 FBtr0078490 tRNA:CR32449 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10425 chr3R 11954099 11954235 + 22 NA promoter-TSS (FBgn0003319) protein_coding-promoter-TSS (FBgn0003319) -284 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9975 chr3R 8608891 8608947 + 22 NA Intergenic Intergenic -5045 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9755 chr3R 6762336 6762390 + 22 NA Intergenic Intergenic -13643 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3012 chr2L 19314455 19314554 + 22 NA Intergenic Intergenic 14198 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12094 chr3R 24235080 24235138 + 22 NA Intergenic Intergenic -8821 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2669 chr2L 17347457 17347644 + 22 NA Intergenic Intergenic 7118 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8297 chr3L 16764241 16764299 + 22 NA intron (FBgn0004108, intron 1 of 2) protein_coding-intron (FBgn0004108, intron 1 of 2) 5098 FBgn0004108 FBgn0004108 FBtr0075323 Nrt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7485 chr3L 9151108 9151162 + 22 NA exon (FBgn0004244, exon 6 of 9) protein_coding-exon (FBgn0004244, exon 6 of 9) 13381 FBgn0263556 FBgn0263556 FBtr0309689 mir-4940 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4445 chr2R 5506595 5506649 + 22 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) 2166 FBgn0262385 FBgn0262385 FBtr0304246 mir-307a pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7759 chr3L 12313976 12314040 + 22 NA Intergenic Intergenic -8324 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13525 chrX 4157027 4157081 + 22 NA Intergenic Intergenic -3076 FBgn0029701 FBgn0029701 FBtr0070646 CG12691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3819 chr2L 22714452 22714556 + 22 NA Intergenic Intergenic 21793 FBgn0262947 FBgn0262947 FBtr0306552 CG43266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7562 chr3L 10586640 10586719 + 22 NA TTS (FBgn0052062) protein_coding-TTS (FBgn0052062) 29997 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1355 chr2L 9552488 9552548 + 22 NA exon (FBgn0032129, exon 7 of 9) protein_coding-exon (FBgn0032129, exon 7 of 9) 6707 FBgn0032127 FBgn0032127 FBtr0273329 CG13114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13122 chrU 374585 374639 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7024 chr3L 4050146 4050200 + 22 NA intron (FBgn0035490, intron 1 of 3) protein_coding-intron (FBgn0035490, intron 1 of 3) -2438 FBgn0035491 FBgn0035491 FBtr0073281 Dpy-30L2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2790 chr2L 17939487 17939666 + 22 NA Intergenic Intergenic -20445 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11416 chr3R 20259534 20259592 + 22 NA intron (FBgn0000036, intron 2 of 9) protein_coding-intron (FBgn0000036, intron 2 of 9) -6026 FBgn0263409 FBgn0263409 FBtr0309188 CR43455 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5933 chr2R 18033269 18033323 + 22 NA intron (FBgn0000008, intron 2 of 9) protein_coding-intron (FBgn0000008, intron 2 of 9) 5856 FBgn0029084 FBgn0029084 FBtr0071766 gom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8220 chr3L 16188419 16188475 + 22 NA Intergenic Intergenic -2521 FBgn0053687 FBgn0053687 FBtr0091667 CG33687 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1714 chr2L 12805048 12805184 + 22 NA Intergenic Intergenic 3224 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11451 chr3R 20966725 20966779 + 22 NA Intergenic Intergenic 2953 FBgn0039283 FBgn0039283 FBtr0084780 danr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6554 chr2RHet 1927950 1928935 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6403 chr2RHet 726976 727125 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8868 chr3LHet 891158 891307 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5091 chr2R 10620711 10620766 + 22 NA Intergenic Intergenic 6009 FBgn0263376 FBgn0263376 FBtr0309057 CR43428 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4535 chr2R 6222371 6222659 + 22 NA exon (FBgn0261698, exon 14 of 29) protein_coding-exon (FBgn0261698, exon 14 of 29) -14510 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5542 chr2R 14791278 14791332 + 22 NA intron (FBgn0034408, intron 3 of 7) protein_coding-intron (FBgn0034408, intron 3 of 7) 4371 FBgn0086022 FBgn0086022 FBtr0114298 snoRNA:Me28S-U1130 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7090 chr3L 5374892 5374946 + 22 NA exon (FBgn0035604, exon 2 of 8) protein_coding-exon (FBgn0035604, exon 2 of 8) 1002 FBgn0035604 FBgn0035604 FBtr0077153 Ir64a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9311 chr3R 3100821 3100881 + 22 NA exon (FBgn0259172, exon 2 of 3) protein_coding-exon (FBgn0259172, exon 2 of 3) 3537 FBgn0037493 FBgn0037493 FBtr0081579 CG10032 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12884 chr3RHet 1918767 1918838 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2192 chr2L 15200021 15200190 + 22 NA exon (FBgn0028888, exon 1 of 6) protein_coding-exon (FBgn0028888, exon 1 of 6) 304 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10317 chr3R 11385318 11385373 + 22 NA Intergenic Intergenic -6851 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6634 chr2RHet 2262566 2262798 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11050 chr3R 16014392 16014628 + 22 NA Intergenic Intergenic -16021 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_237 chr2L 1394941 1395014 + 22 NA intron (FBgn0002543, intron 3 of 13) protein_coding-intron (FBgn0002543, intron 3 of 13) 25472 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7874 chr3L 13118432 13118566 + 22 NA Intergenic Intergenic -10870 FBgn0053262 FBgn0053262 FBtr0302393 CG33262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12676 chr3R 27126894 27126948 + 22 NA Intergenic Intergenic 4041 FBgn0039840 FBgn0039840 FBtr0085766 CG11340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4760 chr2R 7843131 7843220 + 22 NA exon (FBgn0033668, exon 3 of 9) protein_coding-exon (FBgn0033668, exon 3 of 9) 13178 FBgn0033669 FBgn0033669 FBtr0088053 PI31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3636 chr2L 22188002 22188210 + 22 NA Intergenic Intergenic 12691 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2615 chr2L 17135152 17135322 + 22 NA intron (FBgn0032627, intron 1 of 5) protein_coding-intron (FBgn0032627, intron 1 of 5) 1619 FBgn0032627 FBgn0032627 FBtr0303301 beat-IIIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2184 chr2L 15177872 15178242 + 22 NA exon (FBgn0028888, exon 2 of 6) protein_coding-exon (FBgn0028888, exon 2 of 6) 22352 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4219 chr2R 3917301 3917356 + 22 NA exon (FBgn0263970, exon 1 of 2) ncRNA-exon (FBgn0263970, exon 1 of 2) 105 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13382 chrUextra 18420138 18420192 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9171 chr3R 2288465 2288596 + 22 NA Intergenic Intergenic -5604 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6279 chr2R 20999218 20999567 + 22 NA Intergenic Intergenic -12681 FBgn0003715 FBgn0003715 FBtr0330231 CG16778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2635 chr2L 17214394 17214474 + 22 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -24925 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4962 chr2R 9553018 9553072 + 22 NA exon (FBgn0033863, exon 1 of 1) protein_coding-exon (FBgn0033863, exon 1 of 1) 426 FBgn0033863 FBgn0033863 FBtr0087626 CG13337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4254 chr2R 4219411 4219465 + 22 NA intron (FBgn0261588, intron 1 of 10) protein_coding-intron (FBgn0261588, intron 1 of 10) 4433 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5669 chr2R 15871071 15871125 + 22 NA exon (FBgn0034479, exon 4 of 4) protein_coding-exon (FBgn0034479, exon 4 of 4) 4349 FBgn0034479 FBgn0034479 FBtr0305676 CG8654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8697 chr3L 22375463 22375532 + 22 NA intron (FBgn0004449, intron 1 of 11) protein_coding-intron (FBgn0004449, intron 1 of 8) 25466 FBgn0004449 FBgn0004449 FBtr0330159 Ten-m protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10002 chr3R 8763893 8764124 + 22 NA Intergenic Intergenic 22164 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2443 chr2L 16232189 16232266 + 22 NA exon (FBgn0261999, exon 1 of 11) protein_coding-exon (FBgn0261999, exon 1 of 11) 752 FBgn0261999 FBgn0261999 FBtr0303797 CG42817 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3171 chr2L 20235994 20236255 + 22 NA Intergenic Intergenic -12099 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6993 chr3L 3336780 3336916 + 22 NA promoter-TSS (FBgn0004167) protein_coding-promoter-TSS (FBgn0004167) -12 FBgn0004167 FBgn0004167 FBtr0332056 kst protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11064 chr3R 16160847 16160937 + 22 NA Intergenic Intergenic -4097 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6725 chr3L 607869 607936 + 22 NA Intergenic Intergenic -1333 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9193 chr3R 2437588 2437665 + 22 NA Intergenic Intergenic -2990 FBgn0250846 FBgn0250846 FBtr0301286 glob2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1833 chr2L 13740703 13740776 + 22 NA Intergenic Intergenic 4599 FBgn0051813 FBgn0051813 FBtr0080531 CG31813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10888 chr3R 15071519 15071573 + 22 NA exon (FBgn0038693, exon 2 of 28) protein_coding-exon (FBgn0038693, exon 2 of 28) 305 FBgn0038693 FBgn0038693 FBtr0301694 unc79 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2763 chr2L 17817034 17817162 + 22 NA intron (FBgn0262018, intron 3 of 14) protein_coding-intron (FBgn0262018, intron 2 of 13) -4426 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11865 chr3R 23315756 23315810 + 22 NA TTS (FBgn0039520) protein_coding-TTS (FBgn0039520) 2134 FBgn0039520 FBgn0039520 FBtr0085184 Gr98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11932 chr3R 23604726 23604780 + 22 NA exon (FBgn0085382, exon 10 of 12) protein_coding-exon (FBgn0085382, exon 10 of 12) 42491 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4684 chr2R 7423620 7423674 + 22 NA Intergenic Intergenic -8259 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9042 chr3R 1213810 1213864 + 22 NA promoter-TSS (FBgn0011965) tRNA-promoter-TSS (FBgn0011965) -113 FBgn0011965 FBgn0011965 FBtr0078790 tRNA:R:83AB tRNA Nup98-S2-pascual-garcia2017_R1_peak_13182 chrU 1880176 1880230 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3884 chr2LHet 257165 257329 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10309 chr3R 11326173 11326237 + 22 NA Intergenic Intergenic 5881 FBgn0038345 FBgn0038345 FBtr0083148 CG5213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8681 chr3L 22227600 22227683 + 22 NA intron (FBgn0037153, intron 9 of 10) protein_coding-intron (FBgn0037153, intron 9 of 10) 28354 FBgn0028500 FBgn0028500 FBtr0078512 Rich protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5794 chr2R 16971602 16971896 + 22 NA promoter-TSS (FBgn0003748) protein_coding-promoter-TSS (FBgn0003748) 6758 FBgn0034585 FBgn0034585 FBtr0071640 CG4030 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7037 chr3L 4310291 4310347 + 22 NA Intergenic Intergenic -3164 FBgn0052251 FBgn0052251 FBtr0073286 CG32251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13676 chrX 12646003 12646081 + 22 NA Intergenic Intergenic 5692 FBgn0030418 FBgn0030418 FBtr0333722 CG4004 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13583 chrX 7090252 7090330 + 22 NA exon (FBgn0029939, exon 1 of 4) protein_coding-exon (FBgn0029939, exon 1 of 4) 229 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7119 chr3L 5892537 5892641 + 22 NA promoter-TSS (FBgn0052409) protein_coding-promoter-TSS (FBgn0052409) -39 FBgn0052409 FBgn0052409 FBtr0077030 CG32409 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3660 chr2L 22222556 22222888 + 22 NA Intergenic Intergenic -3429 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_13235 chrU 2993815 2994189 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2780 chr2L 17888718 17888772 + 22 NA Intergenic Intergenic -5067 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5417 chr2R 13698503 13698557 + 22 NA intron (FBgn0259211, intron 2 of 15) protein_coding-intron (FBgn0259211, intron 2 of 12) -12540 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4393 chr2R 5031429 5031483 + 22 NA promoter-TSS (FBgn0050342) protein_coding-promoter-TSS (FBgn0050342) -8 FBgn0050342 FBgn0050342 FBtr0088582 Prp38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11823 chr3R 23189267 23189321 + 22 NA exon (FBgn0260487, exon 4 of 7) protein_coding-exon (FBgn0260487, exon 4 of 7) 4182 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5133 chr2R 10970481 10970607 + 22 NA Intergenic Intergenic -26798 FBgn0053467 FBgn0053467 FBtr0089861 CG33467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11271 chr3R 17711556 17711628 + 22 NA promoter-TSS (FBgn0038915) protein_coding-promoter-TSS (FBgn0038915) -320 FBgn0038915 FBgn0038915 FBtr0084152 CG17819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13564 chrX 5885600 5885772 + 22 NA exon (FBgn0029831, exon 3 of 3) protein_coding-exon (FBgn0029831, exon 3 of 3) 2841 FBgn0029831 FBgn0029831 FBtr0070866 CG5966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5001 chr2R 9741843 9741922 + 22 NA promoter-TSS (FBgn0033879) protein_coding-promoter-TSS (FBgn0033879) -46 FBgn0033879 FBgn0033879 FBtr0087644 CG6543 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4305 chr2R 4631700 4631776 + 22 NA intron (FBgn0027585, intron 1 of 7) protein_coding-intron (FBgn0027585, intron 1 of 7) 6863 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_99 chr2L 886438 886492 + 22 NA Intergenic Intergenic -1324 FBgn0031292 FBgn0031292 FBtr0332181 CG15824 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5371 chr2R 13215972 13216029 + 22 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -21193 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13522 chrX 3989318 3989375 + 22 NA Intergenic Intergenic 5722 FBgn0029693 FBgn0029693 FBtr0070671 CG6379 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_865 chr2L 6263387 6263441 + 22 NA TTS (FBgn0031792) protein_coding-TTS (FBgn0031792) 1076 FBgn0031792 FBgn0031792 FBtr0079285 CG13983 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1487 chr2L 11045318 11045392 + 22 NA intron (FBgn0032330, intron 2 of 6) protein_coding-intron (FBgn0032330, intron 2 of 6) 10506 FBgn0040967 FBgn0040967 FBtr0080160 CG18666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2043 chr2L 14627147 14627201 + 22 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 10905 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13791 chrX 17801670 17801724 + 22 NA promoter-TSS (FBgn0027605) protein_coding-promoter-TSS (FBgn0027605) -23 FBgn0027605 FBgn0027605 FBtr0074504 Vps4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2336 chr2L 15812023 15812084 + 22 NA promoter-TSS (FBgn0262150) protein_coding-promoter-TSS (FBgn0262150) 88 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_555 chr2L 3813453 3813514 + 22 NA promoter-TSS (FBgn0031573) protein_coding-promoter-TSS (FBgn0031573) -76 FBgn0031573 FBgn0031573 FBtr0077515 CG3407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13610 chrX 8519003 8519116 + 22 NA Intergenic Intergenic -18724 FBgn0030054 FBgn0030054 FBtr0071228 Caf1-180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6639 chr2RHet 2273811 2274202 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12085 chr3R 24206604 24206686 + 22 NA Intergenic Intergenic 28681 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12648 chr3R 26987488 26987542 + 22 NA intron (FBgn0086704, intron 6 of 8) protein_coding-intron (FBgn0013973, intron 16 of 16) 7310 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5663 chr2R 15851043 15851114 + 22 NA Intergenic Intergenic 12140 FBgn0034478 FBgn0034478 FBtr0086339 CG10822 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7525 chr3L 10049718 10049772 + 22 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 32755 FBgn0036066 FBgn0036066 FBtr0076316 CG14160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4875 chr2R 8848761 8849057 + 22 NA Intergenic Intergenic 7848 FBgn0033787 FBgn0033787 FBtr0087792 CG13321 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9211 chr3R 2534703 2534818 + 22 NA intron (FBgn0051481, intron 7 of 7) protein_coding-intron (FBgn0051481, intron 8 of 8) 4956 FBgn0004783 FBgn0004783 FBtr0081691 Ccp84Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_791 chr2L 5623412 5623466 + 22 NA exon (FBgn0031726, exon 1 of 3) pseudogene-exon (FBgn0031726, exon 1 of 3) 321 FBgn0031726 FBgn0031726 FBtr0100853 Cyp6a16Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6558 chr2RHet 1934438 1934496 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5523 chr2R 14623796 14624104 + 22 NA intron (FBgn0053147, intron 3 of 8) protein_coding-intron (FBgn0053147, intron 3 of 8) -2047 FBgn0053998 FBgn0053998 FBtr0100053 CG33998 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9415 chr3R 3891100 3891183 + 22 NA intron (FBgn0037546, intron 1 of 3) protein_coding-intron (FBgn0037546, intron 1 of 3) 6135 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7136 chr3L 6012211 6012623 + 22 NA exon (FBgn0052406, exon 3 of 7) protein_coding-exon (FBgn0052406, exon 3 of 7) -8296 FBgn0035657 FBgn0035657 FBtr0077069 alphaKap4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_419 chr2L 2654631 2654691 + 22 NA promoter-TSS (FBgn0031443) protein_coding-promoter-TSS (FBgn0031443) 612 FBgn0026395 FBgn0026395 FBtr0077698 Or23a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4805 chr2R 8167142 8167201 + 22 NA promoter-TSS (FBgn0261611) protein_coding-promoter-TSS (FBgn0261611) -11123 FBgn0261611 FBgn0261611 FBtr0332924 CG42700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1577 chr2L 11793330 11793388 + 22 NA promoter-TSS (FBgn0032376) protein_coding-promoter-TSS (FBgn0032376) 724 FBgn0032377 FBgn0032377 FBtr0080264 CG14937 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1303 chr2L 9033953 9034062 + 22 NA Intergenic Intergenic -8603 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3515 chr2L 21885783 21885877 + 22 NA Intergenic Intergenic -8397 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6772 chr3L 917130 917195 + 22 NA intron (FBgn0264574, intron 2 of 14) protein_coding-intron (FBgn0264574, intron 2 of 12) 8050 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2343 chr2L 15852741 15852795 + 22 NA exon (FBgn0028903, exon 2 of 2) protein_coding-exon (FBgn0028903, exon 2 of 2) 176 FBgn0028903 FBgn0028903 FBtr0080787 CG13243 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7613 chr3L 10751179 10751238 + 22 NA Intergenic Intergenic -13884 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7589 chr3L 10699234 10699384 + 22 NA Intergenic Intergenic -9332 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5344 chr2R 12882641 12882839 + 22 NA TTS (FBgn0050462) protein_coding-TTS (FBgn0050462) 3359 FBgn0050461 FBgn0050461 FBtr0100252 CG30461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12697 chr3R 27189632 27189691 + 22 NA intron (FBgn0085376, intron 15 of 16) protein_coding-intron (FBgn0085376, intron 15 of 16) -8488 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5111 chr2R 10820754 10820808 + 22 NA promoter-TSS (FBgn0040747) protein_coding-promoter-TSS (FBgn0040747) -239 FBgn0040747 FBgn0040747 FBtr0087406 CG12853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9278 chr3R 2843004 2843074 + 22 NA Intergenic Intergenic -35018 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5943 chr2R 18127419 18127534 + 22 NA Intergenic Intergenic -11752 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2978 chr2L 19202378 19202432 + 22 NA intron (FBgn0015380, intron 1 of 3) protein_coding-intron (FBgn0015380, intron 1 of 3) 12059 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7018 chr3L 3985298 3985415 + 22 NA exon (FBgn0004880, exon 1 of 2) protein_coding-exon (FBgn0004880, exon 1 of 2) 1460 FBgn0004880 FBgn0004880 FBtr0073165 scrt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11081 chr3R 16201118 16201186 + 22 NA Intergenic Intergenic 15122 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8158 chr3L 15619344 15619432 + 22 NA intron (FBgn0259236, intron 1 of 1) protein_coding-intron (FBgn0259236, intron 1 of 1) 6292 FBgn0259236 FBgn0259236 FBtr0299851 comm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7344 chr3L 7747793 7747957 + 22 NA exon (FBgn0035817, exon 1 of 1) protein_coding-exon (FBgn0035817, exon 1 of 1) 366 FBgn0035817 FBgn0035817 FBtr0076810 CG7409 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2160 chr2L 15087481 15087734 + 22 NA exon (FBgn0028879, exon 3 of 17) protein_coding-exon (FBgn0028879, exon 3 of 17) 12831 FBgn0028879 FBgn0028879 FBtr0332180 CG15270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9780 chr3R 6929624 6929736 + 22 NA Intergenic Intergenic 11748 FBgn0037860 FBgn0037860 FBtr0082380 CG6629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11725 chr3R 22614124 22614328 + 22 NA Intergenic Intergenic 4166 FBgn0261861 FBgn0261861 FBtr0310470 CG42790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4100 chr2R 2899652 2899761 + 22 NA promoter-TSS (FBgn0029506) protein_coding-promoter-TSS (FBgn0029506) -55 FBgn0029506 FBgn0029506 FBtr0086180 Tsp42Ee protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4924 chr2R 9252648 9252702 + 22 NA Intergenic Intergenic -10702 FBgn0033828 FBgn0033828 FBtr0087721 CG17048 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7648 chr3L 11356509 11356582 + 22 NA exon (FBgn0036155, exon 2 of 3) protein_coding-exon (FBgn0036155, exon 2 of 3) 1440 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5510 chr2R 14453748 14453859 + 22 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 26713 FBgn0085419 FBgn0085419 FBtr0112633 Rgk2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_609 chr2L 4245573 4245649 + 22 NA Intergenic Intergenic -11961 FBgn0031591 FBgn0031591 FBtr0077471 CG15425 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13572 chrX 6182001 6182102 + 22 NA promoter-TSS (FBgn0029857) protein_coding-promoter-TSS (FBgn0029857) -24 FBgn0026015 FBgn0026015 FBtr0070930 Top3beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6663 chr2RHet 2434631 2434703 + 22 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1052 chr2L 8119319 8119373 + 22 NA exon (FBgn0031985, exon 9 of 13) protein_coding-exon (FBgn0031985, exon 9 of 13) 4655 FBgn0031985 FBgn0031985 FBtr0301229 mon2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12637 chr3R 26964507 26964561 + 22 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 4420 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6029 chr2R 18900222 18900431 + 22 NA exon (FBgn0261705, exon 4 of 5) protein_coding-exon (FBgn0261705, exon 4 of 5) -13920 FBgn0034808 FBgn0034808 FBtr0071988 CG9896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4868 chr2R 8789367 8789581 + 22 NA Intergenic Intergenic -14028 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5740 chr2R 16405290 16405533 + 21 NA Intergenic Intergenic -4737 FBgn0034510 FBgn0034510 FBtr0086295 CG13426 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_381 chr2L 2280853 2280917 + 21 NA Intergenic Intergenic -1171 FBgn0264084 FBgn0264084 FBtr0330688 CR43753 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11721 chr3R 22600215 22600655 + 21 NA Intergenic Intergenic 9495 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8693 chr3L 22336020 22336074 + 21 NA intron (FBgn0004449, intron 1 of 11) protein_coding-intron (FBgn0004449, intron 1 of 8) 13169 FBgn0052450 FBgn0052450 FBtr0078501 CG32450 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6586 chr2RHet 1991193 1992002 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7941 chr3L 13660709 13660846 + 21 NA promoter-TSS (FBgn0264001) protein_coding-promoter-TSS (FBgn0264001) 46840 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7153 chr3L 6110136 6110203 + 21 NA intron (FBgn0005658, intron 4 of 6) protein_coding-intron (FBgn0005658, intron 7 of 9) 5602 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4979 chr2R 9630416 9630482 + 21 NA intron (FBgn0000633, intron 11 of 12) protein_coding-intron (FBgn0000633, intron 11 of 12) -12400 FBgn0033866 FBgn0033866 FBtr0087628 CG6280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1347 chr2L 9489120 9489254 + 21 NA Intergenic Intergenic 5609 FBgn0004868 FBgn0004868 FBtr0079862 Gdi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9467 chr3R 4292771 4292825 + 21 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 10517 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9875 chr3R 7847791 7847997 + 21 NA Intergenic Intergenic 5072 FBgn0037981 FBgn0037981 FBtr0082537 Spt3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3589 chr2L 22053262 22053346 + 21 NA TTS (FBgn0085202) protein_coding-TTS (FBgn0085202) 941 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13557 chrX 5792697 5792830 + 21 NA Intergenic Intergenic -2131 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2193 chr2L 15204601 15204784 + 21 NA TTS (FBgn0263089) ncRNA-TTS (FBgn0263089) 2433 FBgn0263089 FBgn0263089 FBtr0307107 CR43357 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9177 chr3R 2305119 2305216 + 21 NA intron (FBgn0037448, intron 2 of 8) protein_coding-intron (FBgn0037448, intron 2 of 8) -7544 FBgn0037448 FBgn0037448 FBtr0308036 CG15186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1406 chr2L 10024109 10024163 + 21 NA Intergenic Intergenic -2604 FBgn0032176 FBgn0032176 FBtr0079933 CG13127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7557 chr3L 10530687 10530741 + 21 NA intron (FBgn0052062, intron 2 of 13) protein_coding-intron (FBgn0052062, intron 2 of 14) 21468 FBgn0036085 FBgn0036085 FBtr0076291 CG6527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9220 chr3R 2580003 2580168 + 21 NA promoter-TSS (FBgn0004053) protein_coding-promoter-TSS (FBgn0004053) -169 FBgn0004053 FBgn0004053 FBtr0081670 zen protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8632 chr3L 21225116 21225325 + 21 NA intron (FBgn0004865, intron 4 of 6) protein_coding-intron (FBgn0004865, intron 3 of 5) 5511 FBgn0004865 FBgn0004865 FBtr0078307 Eip78C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5682 chr2R 15943309 15943363 + 21 NA Intergenic Intergenic -50844 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10329 chr3R 11420747 11420801 + 21 NA Intergenic Intergenic -40416 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8851 chr3LHet 534651 534715 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1712 chr2L 12802956 12803047 + 21 NA Intergenic Intergenic 5339 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4647 chr2R 7206976 7207083 + 21 NA promoter-TSS (FBgn0016047) protein_coding-promoter-TSS (FBgn0016047) 1788 FBgn0026385 FBgn0026385 FBtr0088166 Or47b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_628 chr2L 4359462 4359520 + 21 NA Intergenic Intergenic 6516 FBgn0031596 FBgn0031596 FBtr0077428 CG15429 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1186 chr2L 8780088 8780142 + 21 NA exon (FBgn0032069, exon 3 of 5) protein_coding-exon (FBgn0032069, exon 3 of 5) 1136 FBgn0032069 FBgn0032069 FBtr0079741 CG9468 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3176 chr2L 20248007 20248061 + 21 NA promoter-TSS (FBgn0259996) protein_coding-promoter-TSS (FBgn0259996) -189 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1004 chr2L 7576506 7576572 + 21 NA promoter-TSS (FBgn0085403) protein_coding-promoter-TSS (FBgn0085403) 2020 FBgn0031923 FBgn0031923 FBtr0079521 CG13791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5296 chr2R 12409730 12409784 + 21 NA intron (FBgn0011260, intron 1 of 12) protein_coding-intron (FBgn0011260, intron 2 of 14) 5197 FBgn0011260 FBgn0011260 FBtr0087091 Sema-2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7685 chr3L 11751566 11751620 + 21 NA intron (FBgn0036202, intron 2 of 7) protein_coding-intron (FBgn0036202, intron 2 of 7) 7188 FBgn0041231 FBgn0041231 FBtr0076118 Gr68a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11325 chr3R 18571289 18571366 + 21 NA promoter-TSS (FBgn0039019) protein_coding-promoter-TSS (FBgn0039019) -23 FBgn0039019 FBgn0039019 FBtr0084309 HP1c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10355 chr3R 11582816 11582884 + 21 NA Intergenic Intergenic -5987 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4318 chr2R 4678490 4678561 + 21 NA Intergenic Intergenic -1613 FBgn0033330 FBgn0033330 FBtr0088714 CG8746 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6306 chr2RHet 80866 81058 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8027 chr3L 14214078 14214132 + 21 NA promoter-TSS (FBgn0013718) protein_coding-promoter-TSS (FBgn0013718) 2800 FBgn0036415 FBgn0036415 FBtr0075737 CG7768 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3185 chr2L 20299917 20300041 + 21 NA Intergenic Intergenic -2680 FBgn0263333 FBgn0263333 FBtr0308760 CR43414 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_491 chr2L 3335931 3336061 + 21 NA exon (FBgn0020445, exon 8 of 9) protein_coding-exon (FBgn0020445, exon 8 of 9) 3182 FBgn0031523 FBgn0031523 FBtr0304701 CG15408 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6612 chr2RHet 2200286 2200355 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10423 chr3R 11951720 11951774 + 21 NA Intergenic Intergenic -2704 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5079 chr2R 10560423 10560493 + 21 NA exon (FBgn0020269, exon 5 of 6) protein_coding-exon (FBgn0020269, exon 5 of 6) 4505 FBgn0033955 FBgn0033955 FBtr0300765 CG12866 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12236 chr3R 24778445 24778499 + 21 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 17604 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3472 chr2L 21803162 21803234 + 21 NA Intergenic Intergenic -7768 FBgn0051612 FBgn0051612 FBtr0300999 CG31612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_277 chr2L 1477302 1477454 + 21 NA Intergenic Intergenic -14917 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2066 chr2L 14732867 14733002 + 21 NA Intergenic Intergenic -2909 FBgn0051835 FBgn0051835 FBtr0080667 CG31835 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5704 chr2R 16101735 16101789 + 21 NA Intergenic Intergenic -1638 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13233 chrU 2659442 2659622 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10299 chr3R 11260722 11260802 + 21 NA promoter-TSS (FBgn0038339) protein_coding-promoter-TSS (FBgn0038339) -856 FBgn0038339 FBgn0038339 FBtr0113239 CG6118 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7216 chr3L 6681341 6681467 + 21 NA Intergenic Intergenic 4350 FBgn0035710 FBgn0035710 FBtr0076960 SP1173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6799 chr3L 1139173 1139227 + 21 NA Intergenic Intergenic 38076 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1033 chr2L 7946905 7947110 + 21 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) 30058 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8132 chr3L 15333726 15333917 + 21 NA exon (FBgn0036494, exon 1 of 1) protein_coding-exon (FBgn0036494, exon 1 of 1) 4029 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9855 chr3R 7602879 7603027 + 21 NA promoter-TSS (FBgn0086910) protein_coding-promoter-TSS (FBgn0086910) 1118 FBgn0086910 FBgn0086910 FBtr0082533 l(3)neo38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11167 chr3R 16831602 16831708 + 21 NA exon (FBgn0038845, exon 1 of 2) protein_coding-exon (FBgn0038845, exon 1 of 2) 1054 FBgn0038845 FBgn0038845 FBtr0084048 CG10827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1926 chr2L 14308653 14308737 + 21 NA exon (FBgn0261563, exon 2 of 14) protein_coding-exon (FBgn0261563, exon 2 of 14) -13301 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11784 chr3R 23029983 23030042 + 21 NA Intergenic Intergenic -10296 FBgn0004197 FBgn0004197 FBtr0085128 Ser protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3339 chr2L 21079014 21079117 + 21 NA exon (FBgn0032911, exon 6 of 9) protein_coding-exon (FBgn0032911, exon 6 of 9) 3429 FBgn0053511 FBgn0053511 FBtr0091451 CG33511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2715 chr2L 17628829 17628891 + 21 NA TTS (FBgn0262356) protein_coding-TTS (FBgn0262356) 1001 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13358 chrUextra 10890985 10891039 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1633 chr2L 12343579 12343633 + 21 NA promoter-TSS (FBgn0262475) protein_coding-promoter-TSS (FBgn0262475) 660 FBgn0264361 FBgn0264361 FBtr0332235 CG43813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_895 chr2L 6549936 6549990 + 21 NA Intergenic Intergenic 7396 FBgn0031829 FBgn0031829 FBtr0079333 osm-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3916 chr2R 388295 388528 + 21 NA Intergenic Intergenic -9092 FBgn0050260 FBgn0050260 FBtr0100840 tRNA:CR30260 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12203 chr3R 24605994 24606220 + 21 NA Intergenic Intergenic -9232 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13623 chrX 9033269 9033433 + 21 NA Intergenic Intergenic -3234 FBgn0030091 FBgn0030091 FBtr0071299 CG7065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6613 chr2RHet 2200676 2201495 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10099 chr3R 9455844 9456045 + 21 NA Intergenic Intergenic -1720 FBgn0038163 FBgn0038163 FBtr0309093 CG10841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3560 chr2L 22000147 22000201 + 21 NA Intergenic Intergenic -7241 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9718 chr3R 6484358 6484426 + 21 NA exon (FBgn0085333, exon 2 of 4) protein_coding-exon (FBgn0085333, exon 2 of 4) 2224 FBgn0085333 FBgn0085333 FBtr0112500 CG34304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4217 chr2R 3915588 3915842 + 21 NA TTS (FBgn0263970) ncRNA-TTS (FBgn0263970) 1718 FBgn0263970 FBgn0263970 FBtr0329886 CR43724 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4074 chr2R 2686587 2686641 + 21 NA promoter-TSS (FBgn0085421) protein_coding-promoter-TSS (FBgn0085421) -8503 FBgn0014028 FBgn0014028 FBtr0086156 SdhB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4505 chr2R 6028760 6028830 + 21 NA promoter-TSS (FBgn0263444) ncRNA-promoter-TSS (FBgn0263444) 471 FBgn0026388 FBgn0026388 FBtr0088331 Or46a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2757 chr2L 17802266 17802325 + 21 NA exon (FBgn0262018, exon 8 of 14) protein_coding-exon (FBgn0262018, exon 8 of 14) 9883 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1950 chr2L 14371035 14371150 + 21 NA Intergenic Intergenic 9023 FBgn0015546 FBgn0015546 FBtr0080630 spel1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5204 chr2R 11554367 11554489 + 21 NA intron (FBgn0023441, intron 3 of 12) protein_coding-intron (FBgn0023441, intron 3 of 9) -1829 FBgn0023441 FBgn0023441 FBtr0087347 fus protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4922 chr2R 9211937 9211992 + 21 NA Intergenic Intergenic 4982 FBgn0262391 FBgn0262391 FBtr0304273 mir-184 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3104 chr2L 19828659 19828778 + 21 NA exon (FBgn0263873, exon 1 of 15) protein_coding-exon (FBgn0263873, exon 1 of 15) 12304 FBgn0043021 FBgn0043021 FBtr0081294 snRNA:U5:38ABb snRNA Nup98-S2-pascual-garcia2017_R1_peak_2546 chr2L 16937835 16937898 + 21 NA Intergenic Intergenic 7508 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13534 chrX 4768825 4768879 + 21 NA promoter-TSS (FBgn0029730) protein_coding-promoter-TSS (FBgn0029730) -437 FBgn0263506 FBgn0263506 FBtr0309526 CR43495 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9455 chr3R 4195575 4195629 + 21 NA intron (FBgn0263416, intron 15 of 15) protein_coding-intron (FBgn0263416, intron 15 of 15) 7054 FBgn0037584 FBgn0037584 FBtr0301759 CG7963 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13248 chrU 3554707 3554821 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9275 chr3R 2830397 2830456 + 21 NA Intergenic Intergenic -47631 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8656 chr3L 21689121 21689175 + 21 NA intron (FBgn0052447, intron 1 of 2) protein_coding-intron (FBgn0052447, intron 1 of 2) 10317 FBgn0052447 FBgn0052447 FBtr0078461 CG32447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11260 chr3R 17654985 17655073 + 21 NA Intergenic Intergenic -3196 FBgn0041229 FBgn0041229 FBtr0084133 Gr93a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3387 chr2L 21366423 21366477 + 21 NA exon (FBgn0023090, exon 5 of 5) protein_coding-exon (FBgn0023090, exon 5 of 5) 3256 FBgn0041245 FBgn0041245 FBtr0081522 Gr39b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5361 chr2R 13129295 13129361 + 21 NA intron (FBgn0261642, intron 2 of 9) protein_coding-intron (FBgn0261642, intron 2 of 9) 4454 FBgn0034206 FBgn0034206 FBtr0086996 CG18469 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7651 chr3L 11362196 11362265 + 21 NA Intergenic Intergenic -4245 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1187 chr2L 8781131 8781187 + 21 NA promoter-TSS (FBgn0032069) protein_coding-promoter-TSS (FBgn0032069) 92 FBgn0032069 FBgn0032069 FBtr0079741 CG9468 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5082 chr2R 10571923 10571996 + 21 NA exon (FBgn0020269, exon 2 of 6) protein_coding-exon (FBgn0020269, exon 2 of 6) -6318 FBgn0050480 FBgn0050480 FBtr0087478 CG30480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8180 chr3L 15860647 15860701 + 21 NA exon (FBgn0036542, exon 8 of 11) protein_coding-exon (FBgn0036542, exon 8 of 11) -11197 FBgn0036541 FBgn0036541 FBtr0075533 CG12486 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12041 chr3R 24039747 24039801 + 21 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 49570 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10074 chr3R 9316169 9316223 + 21 NA Intergenic Intergenic -24368 FBgn0040554 FBgn0040554 FBtr0309274 CR17025 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5550 chr2R 14844730 14844929 + 21 NA exon (FBgn0034408, exon 6 of 8) protein_coding-exon (FBgn0034408, exon 6 of 8) 13827 FBgn0014269 FBgn0014269 FBtr0086601 prod protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3578 chr2L 22027385 22027444 + 21 NA Intergenic Intergenic 7379 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9694 chr3R 6351966 6352020 + 21 NA intron (FBgn0001235, intron 9 of 12) protein_coding-intron (FBgn0001235, intron 8 of 11) -13215 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1454 chr2L 10675310 10675364 + 21 NA Intergenic Intergenic -2033 FBgn0040496 FBgn0040496 FBtr0080105 CG17104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7433 chr3L 8732301 8732379 + 21 NA promoter-TSS (FBgn0003149) protein_coding-promoter-TSS (FBgn0003149) -333 FBgn0003149 FBgn0003149 FBtr0306639 Prm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5389 chr2R 13380176 13380396 + 21 NA promoter-TSS (FBgn0050103) protein_coding-promoter-TSS (FBgn0050103) -981 FBgn0050103 FBgn0050103 FBtr0086929 CG30103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10363 chr3R 11607108 11607286 + 21 NA TTS (FBgn0038359) protein_coding-TTS (FBgn0038359) 1670 FBgn0038359 FBgn0038359 FBtr0083171 CG5614 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7079 chr3L 5273489 5273543 + 21 NA Intergenic Intergenic 45933 FBgn0035598 FBgn0035598 FBtr0077171 CG4669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3936 chr2R 691826 691880 + 21 NA Intergenic Intergenic -15706 FBgn0250830 FBgn0250830 FBtr0111273 CG12547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7187 chr3L 6377735 6377827 + 21 NA Intergenic Intergenic -15911 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11993 chr3R 23875665 23876003 + 21 NA exon (FBgn0085391, exon 2 of 9) protein_coding-exon (FBgn0085391, exon 2 of 9) 23500 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4744 chr2R 7747223 7747308 + 21 NA exon (FBgn0013756, exon 3 of 5) protein_coding-exon (FBgn0013756, exon 3 of 5) -1550 FBgn0085259 FBgn0085259 FBtr0112423 CG34230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6043 chr2R 18940401 18940456 + 21 NA Intergenic Intergenic -5378 FBgn0050194 FBgn0050194 FBtr0300176 CG30194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3199 chr2L 20387195 20387409 + 21 NA exon (FBgn0032857, exon 2 of 2) protein_coding-exon (FBgn0032857, exon 2 of 2) -4947 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13021 chr4 1087898 1087952 + 21 NA exon (FBgn0087002, exon 4 of 8) protein_coding-exon (FBgn0087002, exon 4 of 8) 2387 FBgn0087002 FBgn0087002 FBtr0089188 Rfabg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5014 chr2R 9919192 9919269 + 21 NA promoter-TSS (FBgn0002643) protein_coding-promoter-TSS (FBgn0002643) 46 FBgn0002643 FBgn0002643 FBtr0087598 mam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5246 chr2R 11959711 11959770 + 21 NA Intergenic Intergenic 6584 FBgn0263334 FBgn0263334 FBtr0308762 CR43415 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13837 chrX 20905864 20905918 + 21 NA promoter-TSS (FBgn0031145) protein_coding-promoter-TSS (FBgn0031145) -605 FBgn0031145 FBgn0031145 FBtr0333761 Ntf-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5963 chr2R 18233586 18233783 + 21 NA promoter-TSS (FBgn0034720) protein_coding-promoter-TSS (FBgn0034720) -2128 FBgn0034721 FBgn0034721 FBtr0071819 CG11298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1144 chr2L 8647216 8647275 + 21 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -25907 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3992 chr2R 1341584 1341638 + 21 NA TTS (FBgn0259247) protein_coding-TTS (FBgn0259247) 37754 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8407 chr3L 17587896 17587969 + 21 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) 24493 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5255 chr2R 12106856 12106912 + 21 NA promoter-TSS (FBgn0050239) tRNA-promoter-TSS (FBgn0050239) 66 FBgn0050238 FBgn0050238 FBtr0087197 tRNA:CR30238 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12953 chr4 640510 640635 + 21 NA exon (FBgn0025936, exon 12 of 13) protein_coding-exon (FBgn0025936, exon 12 of 13) 6085 FBgn0039914 FBgn0039914 FBtr0089103 mav protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11975 chr3R 23825674 23825893 + 21 NA Intergenic Intergenic -9310 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1516 chr2L 11252991 11253045 + 21 NA intron (FBgn0264442, intron 5 of 6) protein_coding-intron (FBgn0264442, intron 7 of 8) 15984 FBgn0040232 FBgn0040232 FBtr0332205 cmet protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13656 chrX 11348367 11348473 + 21 NA promoter-TSS (FBgn0030301) protein_coding-promoter-TSS (FBgn0030301) -49 FBgn0262740 FBgn0262740 FBtr0300732 CG11727 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10724 chr3R 13892929 13893020 + 21 NA Intergenic Intergenic -13869 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3742 chr2L 22527728 22528362 + 21 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 55563 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13459 chrX 1492742 1492810 + 21 NA intron (FBgn0025390, intron 2 of 7) protein_coding-intron (FBgn0025390, intron 2 of 7) -13598 FBgn0000210 FBgn0000210 FBtr0303563 br protein_coding Nup98-S2-pascual-garcia2017_R1_peak_197 chr2L 1284613 1284845 + 21 NA exon (FBgn0041097, exon 4 of 12) protein_coding-exon (FBgn0041097, exon 4 of 12) 28303 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2835 chr2L 18075460 18075789 + 21 NA Intergenic Intergenic -2645 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2830 chr2L 18069206 18069260 + 21 NA exon (FBgn0243486, exon 15 of 15) protein_coding-exon (FBgn0243486, exon 15 of 15) -9036 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5530 chr2R 14655826 14655920 + 21 NA exon (FBgn0034389, exon 2 of 12) protein_coding-exon (FBgn0034389, exon 2 of 12) 1292 FBgn0034389 FBgn0034389 FBtr0110971 Mctp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9749 chr3R 6735907 6735977 + 21 NA Intergenic Intergenic -16690 FBgn0037855 FBgn0037855 FBtr0302935 CG6621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2004 chr2L 14506812 14506903 + 21 NA Intergenic Intergenic 10979 FBgn0028882 FBgn0028882 FBtr0080644 tRNA:P:35Bd tRNA Nup98-S2-pascual-garcia2017_R1_peak_1289 chr2L 8976964 8977155 + 21 NA TTS (FBgn0032084) protein_coding-TTS (FBgn0032084) -2083 FBgn0032083 FBgn0032083 FBtr0332207 CG9541 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3744 chr2L 22536380 22536434 + 21 NA exon (FBgn0058006, exon 9 of 10) protein_coding-exon (FBgn0058006, exon 9 of 10) 63925 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7336 chr3L 7632791 7632857 + 21 NA promoter-TSS (FBgn0086074) snoRNA-promoter-TSS (FBgn0086074) 7 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_10365 chr3R 11635205 11635268 + 21 NA intron (FBgn0026616, intron 1 of 4) protein_coding-intron (FBgn0026616, intron 1 of 4) 5262 FBgn0026616 FBgn0026616 FBtr0083179 alpha-Man-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6636 chr2RHet 2264277 2264937 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3352 chr2L 21204123 21204495 + 21 NA Intergenic Intergenic -1567 FBgn0051988 FBgn0051988 FBtr0081490 CG31988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4643 chr2R 7180670 7180729 + 21 NA promoter-TSS (FBgn0015582) protein_coding-promoter-TSS (FBgn0015582) -23 FBgn0015582 FBgn0015582 FBtr0088176 dare protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1088 chr2L 8541542 8541837 + 21 NA promoter-TSS (FBgn0051603) tRNA-promoter-TSS (FBgn0051603) -66 FBgn0051604 FBgn0051604 FBtr0079694 tRNA:CR31604 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6686 chr2RHet 3139558 3139767 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_567 chr2L 3917242 3917298 + 21 NA exon (FBgn0051774, exon 7 of 9) protein_coding-exon (FBgn0051774, exon 7 of 9) -2982 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8793 chr3L 23848289 23848439 + 21 NA intron (FBgn0058470, intron 12 of 12) protein_coding-intron (FBgn0058470, intron 12 of 12) 27878 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8139 chr3L 15397095 15397149 + 21 NA Intergenic Intergenic -3810 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10238 chr3R 10699134 10699193 + 21 NA Intergenic Intergenic -6000 FBgn0038268 FBgn0038268 FBtr0082997 CG3631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2648 chr2L 17266949 17267017 + 21 NA Intergenic Intergenic -6251 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_115 chr2L 922752 922889 + 21 NA promoter-TSS (FBgn0028481) protein_coding-promoter-TSS (FBgn0028481) 27 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4501 chr2R 5974967 5975108 + 21 NA promoter-TSS (FBgn0033484) protein_coding-promoter-TSS (FBgn0033484) -469 FBgn0028560 FBgn0028560 FBtr0089674 sut4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6202 chr2R 20310637 20310691 + 21 NA TTS (FBgn0259729) protein_coding-TTS (FBgn0259729) 1961 FBgn0259729 FBgn0259729 FBtr0299995 CG42383 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8066 chr3L 14577081 14577136 + 21 NA exon (FBgn0040318, exon 4 of 4) protein_coding-exon (FBgn0040318, exon 4 of 4) 15532 FBgn0040318 FBgn0040318 FBtr0075720 HGTX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11323 chr3R 18408928 18408982 + 21 NA promoter-TSS (FBgn0024558) protein_coding-promoter-TSS (FBgn0024558) -5 FBgn0024558 FBgn0024558 FBtr0084280 Dph5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1828 chr2L 13706069 13706205 + 21 NA intron (FBgn0051814, intron 2 of 12) protein_coding-intron (FBgn0051814, intron 2 of 12) -2078 FBgn0028848 FBgn0028848 FBtr0310273 CG7311 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5535 chr2R 14759037 14759172 + 21 NA Intergenic Intergenic -3432 FBgn0262569 FBgn0262569 FBtr0304896 CG43109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10725 chr3R 13895611 13895922 + 21 NA Intergenic Intergenic -11077 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10433 chr3R 11965404 11965459 + 21 NA intron (FBgn0003319, intron 2 of 10) protein_coding-intron (FBgn0003319, intron 2 of 10) 7146 FBgn0038400 FBgn0038400 FBtr0083281 CG5903 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5288 chr2R 12357726 12357780 + 21 NA Intergenic Intergenic 2039 FBgn0261293 FBgn0261293 FBtr0091479 CheB53b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8586 chr3L 20103336 20103390 + 21 NA exon (FBgn0036937, exon 3 of 5) protein_coding-exon (FBgn0036937, exon 3 of 5) 1271 FBgn0036937 FBgn0036937 FBtr0074869 Ir76b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13198 chrU 1978577 1978631 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10944 chr3R 15434633 15434717 + 21 NA exon (FBgn0038717, exon 5 of 6) protein_coding-exon (FBgn0038717, exon 5 of 6) -1272 FBgn0038718 FBgn0038718 FBtr0083779 CG17752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1815 chr2L 13498235 13498296 + 21 NA exon (FBgn0263354, exon 5 of 5) protein_coding-exon (FBgn0263354, exon 5 of 5) -29576 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5202 chr2R 11550343 11550397 + 21 NA exon (FBgn0023441, exon 10 of 10) protein_coding-exon (FBgn0023441, exon 10 of 10) 2229 FBgn0023441 FBgn0023441 FBtr0087347 fus protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11156 chr3R 16729669 16729889 + 21 NA TTS (FBgn0044810) protein_coding-TTS (FBgn0044810) 1461 FBgn0044810 FBgn0044810 FBtr0083985 TotX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1738 chr2L 12915978 12916050 + 21 NA promoter-TSS (FBgn0040509) protein_coding-promoter-TSS (FBgn0040509) -800 FBgn0040509 FBgn0040509 FBtr0080414 ACXB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_708 chr2L 4906722 4906776 + 21 NA promoter-TSS (FBgn0031646) protein_coding-promoter-TSS (FBgn0031646) 6 FBgn0031646 FBgn0031646 FBtr0077403 CG2837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4117 chr2R 3159494 3159619 + 21 NA TTS (FBgn0033155) protein_coding-TTS (FBgn0033155) 6024 FBgn0033155 FBgn0033155 FBtr0089021 Br140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8117 chr3L 15116845 15116994 + 21 NA intron (FBgn0036481, intron 1 of 4) protein_coding-intron (FBgn0036480, intron 7 of 12) 1502 FBgn0036481 FBgn0036481 FBtr0333935 CG16959 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12517 chr3R 26233534 26233588 + 21 NA Intergenic Intergenic 15132 FBgn0027544 FBgn0027544 FBtr0303200 CG2217 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6218 chr2R 20466839 20466898 + 21 NA exon (FBgn0069913, exon 1 of 2) protein_coding-exon (FBgn0069913, exon 1 of 2) 436 FBgn0069913 FBgn0069913 FBtr0301624 CG4681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1473 chr2L 10831383 10831596 + 21 NA exon (FBgn0011676, exon 2 of 19) protein_coding-exon (FBgn0011676, exon 2 of 19) 6022 FBgn0011676 FBgn0011676 FBtr0100487 Nos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5654 chr2R 15780812 15780936 + 21 NA Intergenic Intergenic -12449 FBgn0034477 FBgn0034477 FBtr0086341 CG13872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11607 chr3R 22176275 22176329 + 21 NA intron (FBgn0053970, intron 5 of 8) protein_coding-intron (FBgn0053970, intron 5 of 8) -4908 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3989 chr2R 1314828 1314948 + 21 NA intron (FBgn0259247, intron 2 of 7) protein_coding-intron (FBgn0259247, intron 2 of 7) 11031 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4059 chr2R 2478700 2478919 + 21 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) 9674 FBgn0033076 FBgn0033076 FBtr0305958 CG15233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1985 chr2L 14441960 14442173 + 21 NA Intergenic Intergenic 8856 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1592 chr2L 11896357 11896454 + 21 NA exon (FBgn0259225, exon 1 of 8) protein_coding-exon (FBgn0259225, exon 1 of 8) -38100 FBgn0026392 FBgn0026392 FBtr0080278 Or33a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13515 chrX 3638613 3638691 + 21 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -24987 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5298 chr2R 12437055 12437112 + 21 NA Intergenic Intergenic -2682 FBgn0034135 FBgn0034135 FBtr0087097 Syn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2461 chr2L 16406290 16406526 + 21 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) 11476 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3061 chr2L 19676236 19676303 + 21 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 24699 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3652 chr2L 22207210 22207528 + 21 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 6896 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10340 chr3R 11487394 11487454 + 21 NA Intergenic Intergenic -4481 FBgn0053207 FBgn0053207 FBtr0083162 pxb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2346 chr2L 15860722 15860884 + 21 NA Intergenic Intergenic -2459 FBgn0261924 FBgn0261924 FBtr0303588 CG42791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3158 chr2L 20125295 20125488 + 21 NA Intergenic Intergenic 9532 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12862 chr3RHet 1215340 1215465 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_784 chr2L 5588498 5588579 + 21 NA promoter-TSS (FBgn0031723) protein_coding-promoter-TSS (FBgn0031723) -124 FBgn0031723 FBgn0031723 FBtr0079117 CG7251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3268 chr2L 20656404 20656458 + 21 NA promoter-TSS (FBgn0032873) protein_coding-promoter-TSS (FBgn0032873) 3 FBgn0032873 FBgn0032873 FBtr0081388 CG2614 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_543 chr2L 3720968 3721042 + 21 NA promoter-TSS (FBgn0003386) protein_coding-promoter-TSS (FBgn0003386) 2820 FBgn0003386 FBgn0003386 FBtr0289989 Shaw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1012 chr2L 7767315 7767369 + 21 NA promoter-TSS (FBgn0031945) protein_coding-promoter-TSS (FBgn0031945) -307 FBgn0031945 FBgn0031945 FBtr0079485 CG7191 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7792 chr3L 12539657 12539711 + 21 NA intron (FBgn0036302, intron 4 of 9) protein_coding-intron (FBgn0036302, intron 4 of 12) 4874 FBgn0263587 FBgn0263587 FBtr0309822 CR43612 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3467 chr2L 21785132 21785322 + 21 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) -1162 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8012 chr3L 14124355 14124567 + 21 NA promoter-TSS (FBgn0042630) protein_coding-promoter-TSS (FBgn0042630) -64 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5556 chr2R 14900094 14900148 + 21 NA Intergenic Intergenic -17393 FBgn0263083 FBgn0263083 FBtr0307099 CG43351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11382 chr3R 19470163 19470232 + 21 NA intron (FBgn0051145, intron 4 of 15) protein_coding-intron (FBgn0051145, intron 3 of 13) 25181 FBgn0051145 FBgn0051145 FBtr0290057 CG31145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3529 chr2L 21952612 21952666 + 21 NA Intergenic Intergenic 36278 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3138 chr2L 20011278 20011525 + 21 NA intron (FBgn0264443, intron 1 of 5) protein_coding-intron (FBgn0264443, intron 1 of 5) 5881 FBgn0264443 FBgn0264443 FBtr0332566 CG43861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5008 chr2R 9841578 9841684 + 21 NA promoter-TSS (FBgn0262739) protein_coding-promoter-TSS (FBgn0262739) -69 FBgn0050481 FBgn0050481 FBtr0100285 mRpL53 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4598 chr2R 6683865 6683927 + 21 NA Intergenic Intergenic -2044 FBgn0053144 FBgn0053144 FBtr0088254 CG33144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10046 chr3R 9117405 9117470 + 21 NA TTS (FBgn0038134) protein_coding-TTS (FBgn0038134) 999 FBgn0038133 FBgn0038133 FBtr0082738 Osi22 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5234 chr2R 11853568 11853622 + 21 NA exon (FBgn0013988, exon 7 of 15) protein_coding-exon (FBgn0013988, exon 7 of 15) 11048 FBgn0034054 FBgn0034054 FBtr0087201 CG8366 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13249 chrU 3555000 3555228 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6248 chr2R 20737435 20737502 + 21 NA TTS (FBgn0035070) protein_coding-TTS (FBgn0035070) 969 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1291 chr2L 8979844 8979958 + 21 NA promoter-TSS (FBgn0040963) protein_coding-promoter-TSS (FBgn0040963) -758 FBgn0040963 FBgn0040963 FBtr0079760 CG18662 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9674 chr3R 6200412 6200489 + 21 NA intron (FBgn0020379, intron 1 of 10) protein_coding-intron (FBgn0020379, intron 1 of 10) 3340 FBgn0020379 FBgn0020379 FBtr0305997 Rfx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13190 chrU 1968392 1968643 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9818 chr3R 7216821 7216875 + 21 NA intron (FBgn0004595, intron 6 of 7) protein_coding-intron (FBgn0004595, intron 6 of 7) -16771 FBgn0037892 FBgn0037892 FBtr0082384 mRpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7958 chr3L 13743209 13743263 + 21 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 53264 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12997 chr4 997536 997754 + 21 NA exon (FBgn0083990, exon 2 of 2) ncRNA-exon (FBgn0083990, exon 2 of 2) 1851 FBgn0083990 FBgn0083990 FBtr0111046 sphinx ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6608 chr2RHet 2143983 2144084 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5816 chr2R 17140888 17141233 + 21 NA Intergenic Intergenic -2259 FBgn0085426 FBgn0085426 FBtr0305983 Rgk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9556 chr3R 5109821 5109944 + 21 NA Intergenic Intergenic 17128 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11143 chr3R 16649930 16650017 + 21 NA promoter-TSS (FBgn0038830) protein_coding-promoter-TSS (FBgn0038830) -22 FBgn0038830 FBgn0038830 FBtr0083992 CG17272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6362 chr2RHet 528253 528330 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7305 chr3L 7387133 7387214 + 21 NA exon (FBgn0035777, exon 2 of 5) protein_coding-exon (FBgn0035777, exon 2 of 5) -2282 FBgn0052379 FBgn0052379 FBtr0273419 CG32379 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12081 chr3R 24182574 24182654 + 21 NA Intergenic Intergenic 4650 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13218 chrU 2420965 2421121 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10671 chr3R 13578364 13578630 + 21 NA exon (FBgn0038542, exon 6 of 6) protein_coding-exon (FBgn0038542, exon 6 of 6) 9706 FBgn0038542 FBgn0038542 FBtr0083532 TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7125 chr3L 5942245 5942299 + 21 NA intron (FBgn0053993, intron 1 of 5) protein_coding-intron (FBgn0053993, intron 1 of 5) -13869 FBgn0053993 FBgn0053993 FBtr0301034 CG33993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5345 chr2R 12883926 12884054 + 21 NA TTS (FBgn0004580) protein_coding-TTS (FBgn0004580) 2109 FBgn0050461 FBgn0050461 FBtr0100252 CG30461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11276 chr3R 17822092 17822146 + 21 NA exon (FBgn0264490, exon 4 of 5) protein_coding-exon (FBgn0264490, exon 4 of 5) -18300 FBgn0038921 FBgn0038921 FBtr0084170 CG6332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4916 chr2R 9182748 9182802 + 21 NA intron (FBgn0052843, intron 1 of 10) protein_coding-intron (FBgn0052843, intron 1 of 10) 654 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_186 chr2L 1233685 1233749 + 21 NA Intergenic Intergenic -6321 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2794 chr2L 17946494 17946548 + 21 NA Intergenic Intergenic -16893 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3988 chr2R 1219933 1219987 + 21 NA Intergenic Intergenic 8536 FBgn0033017 FBgn0033017 FBtr0086094 CG10465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7150 chr3L 6101513 6101579 + 21 NA intron (FBgn0005658, intron 4 of 9) protein_coding-intron (FBgn0005658, intron 4 of 9) -3021 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6535 chr2RHet 1904155 1904265 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2931 chr2L 18747917 18748117 + 21 NA Intergenic Intergenic 7659 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1083 chr2L 8497978 8498060 + 21 NA intron (FBgn0032048, intron 2 of 3) protein_coding-intron (FBgn0032048, intron 2 of 4) -1712 FBgn0032049 FBgn0032049 FBtr0079701 Bace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_823 chr2L 5843677 5843731 + 21 NA intron (FBgn0085410, intron 1 of 9) protein_coding-intron (FBgn0085410, intron 1 of 9) 18910 FBgn0085410 FBgn0085410 FBtr0330222 TrissinR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10096 chr3R 9447093 9447159 + 21 NA Intergenic Intergenic 5400 FBgn0038161 FBgn0038161 FBtr0082794 CG9269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3773 chr2L 22606616 22606670 + 21 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 37884 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1236 chr2L 8856800 8856895 + 21 NA Intergenic Intergenic -5929 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7655 chr3L 11395128 11395258 + 21 NA Intergenic Intergenic 7403 FBgn0036156 FBgn0036156 FBtr0076172 CG11726 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4780 chr2R 7980616 7980670 + 21 NA intron (FBgn0086677, intron 1 of 2) protein_coding-intron (FBgn0086677, intron 1 of 2) 11862 FBgn0033680 FBgn0033680 FBtr0087981 CG13186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3121 chr2L 19903604 19903785 + 21 NA intron (FBgn0263873, intron 2 of 13) protein_coding-intron (FBgn0263873, intron 4 of 15) 8117 FBgn0262543 FBgn0262543 FBtr0332244 CR43097 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12076 chr3R 24165494 24165599 + 21 NA promoter-TSS (FBgn0039581) protein_coding-promoter-TSS (FBgn0039581) -56 FBgn0039580 FBgn0039580 FBtr0085297 Gfat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6256 chr2R 20796419 20796473 + 21 NA exon (FBgn0085434, exon 15 of 28) protein_coding-exon (FBgn0085434, exon 15 of 28) -4994 FBgn0066084 FBgn0066084 FBtr0100231 RpL41 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7160 chr3L 6155532 6155726 + 21 NA promoter-TSS (FBgn0035687) protein_coding-promoter-TSS (FBgn0035687) -628 FBgn0035687 FBgn0035687 FBtr0076997 CG13296 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2582 chr2L 17027465 17027519 + 21 NA Intergenic Intergenic -14438 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3095 chr2L 19792130 19792188 + 21 NA promoter-TSS (FBgn0032822) protein_coding-promoter-TSS (FBgn0032822) -277 FBgn0032821 FBgn0032821 FBtr0300967 CdGAPr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3235 chr2L 20535840 20536179 + 21 NA Intergenic Intergenic -26415 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11987 chr3R 23850096 23850150 + 21 NA Intergenic Intergenic -2211 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11336 chr3R 18827026 18827083 + 21 NA exon (FBgn0085404, exon 5 of 5) protein_coding-exon (FBgn0085404, exon 5 of 5) -2804 FBgn0263390 FBgn0263390 FBtr0309100 Nha2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_637 chr2L 4429204 4429314 + 21 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -4649 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7355 chr3L 7948134 7948462 + 21 NA Intergenic Intergenic 7012 FBgn0041156 FBgn0041156 FBtr0076751 exex protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5570 chr2R 14977797 14977857 + 21 NA exon (FBgn0004168, exon 2 of 11) protein_coding-exon (FBgn0004168, exon 2 of 11) 5852 FBgn0050125 FBgn0050125 FBtr0086595 Ir56a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13117 chrU 283095 283537 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12493 chr3R 25916075 25916129 + 21 NA intron (FBgn0015542, intron 7 of 7) protein_coding-intron (FBgn0015542, intron 7 of 11) 27694 FBgn0051031 FBgn0051031 FBtr0085566 CG31031 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13245 chrU 3534967 3535860 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_359 chr2L 2023844 2023947 + 21 NA promoter-TSS (FBgn0031384) protein_coding-promoter-TSS (FBgn0031384) -7797 FBgn0011860 FBgn0011860 FBtr0077821 tRNA:G3:22BCb tRNA Nup98-S2-pascual-garcia2017_R1_peak_5319 chr2R 12586761 12586981 + 21 NA exon (FBgn0050463, exon 4 of 12) protein_coding-exon (FBgn0050463, exon 4 of 12) 7668 FBgn0013763 FBgn0013763 FBtr0087111 CG5210 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2611 chr2L 17121024 17121117 + 21 NA Intergenic Intergenic 4891 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8248 chr3L 16325519 16325706 + 21 NA promoter-TSS (FBgn0040794) protein_coding-promoter-TSS (FBgn0040794) 579 FBgn0040074 FBgn0040074 FBtr0075375 retinin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10150 chr3R 9826298 9826455 + 21 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 25305 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_596 chr2L 4161034 4161089 + 21 NA Intergenic Intergenic 5073 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8326 chr3L 17063440 17063507 + 21 NA exon (FBgn0260943, exon 8 of 12) protein_coding-exon (FBgn0260943, exon 8 of 12) 14760 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2031 chr2L 14596385 14596439 + 21 NA Intergenic Intergenic -2447 FBgn0028912 FBgn0028912 FBtr0080646 tRNA:P:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_6793 chr3L 1115239 1115440 + 21 NA Intergenic Intergenic -14250 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_530 chr2L 3611962 3612016 + 21 NA Intergenic Intergenic -5241 FBgn0002985 FBgn0002985 FBtr0077557 odd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10981 chr3R 15635592 15635655 + 21 NA intron (FBgn0014135, intron 2 of 4) protein_coding-intron (FBgn0014135, intron 2 of 4) 7211 FBgn0051471 FBgn0051471 FBtr0083794 tRNA:CR31471 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13333 chrUextra 2167105 2167171 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2013 chr2L 14539306 14539369 + 21 NA Intergenic Intergenic -8413 FBgn0011866 FBgn0011866 FBtr0080663 tRNA:G3:35Be tRNA Nup98-S2-pascual-garcia2017_R1_peak_10269 chr3R 10999730 10999792 + 21 NA exon (FBgn0038294, exon 6 of 9) protein_coding-exon (FBgn0038294, exon 6 of 9) 6231 FBgn0038294 FBgn0038294 FBtr0306642 Mf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9916 chr3R 8104817 8105048 + 21 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) -1942 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6466 chr2RHet 1415298 1415352 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6726 chr3L 608144 608240 + 21 NA Intergenic Intergenic -1623 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9760 chr3R 6798010 6798098 + 21 NA Intergenic Intergenic -21151 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11584 chr3R 22114094 22114267 + 21 NA Intergenic Intergenic 25796 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6233 chr2R 20572769 20572834 + 21 NA promoter-TSS (FBgn0035049) protein_coding-promoter-TSS (FBgn0035049) 2077 FBgn0035049 FBgn0035049 FBtr0304006 Mmp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8929 chr3LHet 2447049 2447144 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1431 chr2L 10375773 10375828 + 21 NA promoter-TSS (FBgn0032233) protein_coding-promoter-TSS (FBgn0032233) -43 FBgn0053303 FBgn0053303 FBtr0080052 CG33303 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_811 chr2L 5751078 5751132 + 21 NA intron (FBgn0031736, intron 1 of 3) protein_coding-intron (FBgn0031736, intron 1 of 3) 4948 FBgn0031735 FBgn0031735 FBtr0079136 CG11029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11000 chr3R 15752446 15752500 + 21 NA exon (FBgn0038753, exon 4 of 4) protein_coding-exon (FBgn0038753, exon 4 of 4) -1380 FBgn0038752 FBgn0038752 FBtr0083850 CG4462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10097 chr3R 9448800 9448964 + 21 NA Intergenic Intergenic 7156 FBgn0038161 FBgn0038161 FBtr0082794 CG9269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9008 chr3R 824578 824674 + 21 NA intron (FBgn0037292, intron 1 of 3) protein_coding-intron (FBgn0037292, intron 1 of 3) 12127 FBgn0037292 FBgn0037292 FBtr0301312 CG2022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4913 chr2R 9178341 9178398 + 21 NA intron (FBgn0052843, intron 1 of 10) protein_coding-intron (FBgn0052843, intron 1 of 10) 5060 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13196 chrU 1977218 1977415 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12837 chr3RHet 556433 556576 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5900 chr2R 17696697 17696751 + 21 NA Intergenic Intergenic 5795 FBgn0046297 FBgn0046297 FBtr0308943 CR9284 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4617 chr2R 6888483 6888581 + 21 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -59326 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8136 chr3L 15375738 15375819 + 21 NA Intergenic Intergenic -25154 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_360 chr2L 2024802 2024945 + 21 NA intron (FBgn0031384, intron 1 of 8) protein_coding-intron (FBgn0031384, intron 1 of 8) -6819 FBgn0011860 FBgn0011860 FBtr0077821 tRNA:G3:22BCb tRNA Nup98-S2-pascual-garcia2017_R1_peak_10297 chr3R 11254070 11254177 + 21 NA intron (FBgn0038339, intron 1 of 4) protein_coding-intron (FBgn0038339, intron 1 of 4) 5783 FBgn0038339 FBgn0038339 FBtr0113239 CG6118 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1530 chr2L 11355326 11355425 + 21 NA Intergenic Intergenic -3498 FBgn0000287 FBgn0000287 FBtr0080236 salr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1228 chr2L 8845027 8845081 + 21 NA Intergenic Intergenic -17722 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10310 chr3R 11327735 11327789 + 21 NA Intergenic Intergenic 6798 FBgn0038346 FBgn0038346 FBtr0083157 CG14872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7224 chr3L 6767268 6767516 + 21 NA Intergenic Intergenic -13178 FBgn0052392 FBgn0052392 FBtr0076948 CG32392 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12737 chr3R 27385478 27385539 + 21 NA intron (FBgn0039852, intron 4 of 8) protein_coding-intron (FBgn0039852, intron 4 of 8) -12357 FBgn0028968 FBgn0028968 FBtr0330096 gammaCop protein_coding Nup98-S2-pascual-garcia2017_R1_peak_64 chr2L 740192 740247 + 21 NA intron (FBgn0026438, intron 4 of 7) protein_coding-intron (FBgn0026438, intron 4 of 7) 4176 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6190 chr2R 20250336 20250390 + 21 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) -11223 FBgn0053537 FBgn0053537 FBtr0100849 tRNA:N5:60C tRNA Nup98-S2-pascual-garcia2017_R1_peak_11432 chr3R 20545326 20545387 + 21 NA promoter-TSS (FBgn0004885) protein_coding-promoter-TSS (FBgn0004885) -272 FBgn0039219 FBgn0039219 FBtr0084745 CG13630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3787 chr2L 22627827 22627892 + 21 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 16668 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4186 chr2R 3673450 3673531 + 21 NA promoter-TSS (FBgn0015614) protein_coding-promoter-TSS (FBgn0015614) -27 FBgn0015614 FBgn0015614 FBtr0088930 CanB2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2849 chr2L 18124701 18124895 + 21 NA exon (FBgn0051785, exon 2 of 3) protein_coding-exon (FBgn0051785, exon 2 of 3) 637 FBgn0051785 FBgn0051785 FBtr0300025 CG31785 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7252 chr3L 6940424 6941192 + 21 NA exon (FBgn0035719, exon 4 of 6) protein_coding-exon (FBgn0035719, exon 4 of 6) 4852 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4268 chr2R 4308230 4308284 + 21 NA promoter-TSS (FBgn0028836) protein_coding-promoter-TSS (FBgn0028836) -236 FBgn0028836 FBgn0028836 FBtr0088742 CSN7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2466 chr2L 16420895 16420958 + 21 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -3042 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_9642 chr3R 5886041 5886100 + 21 NA promoter-TSS (FBgn0037783) protein_coding-promoter-TSS (FBgn0037783) 51 FBgn0037783 FBgn0037783 FBtr0082176 Npc2c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12439 chr3R 25558223 25558289 + 21 NA exon (FBgn0039688, exon 9 of 9) protein_coding-exon (FBgn0039688, exon 9 of 9) 4286 FBgn0027583 FBgn0027583 FBtr0085544 CG7601 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2513 chr2L 16732093 16732147 + 21 NA promoter-TSS (FBgn0032597) protein_coding-promoter-TSS (FBgn0032597) 9 FBgn0032596 FBgn0032596 FBtr0080936 CG17331 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_61 chr2L 737674 737728 + 21 NA exon (FBgn0026438, exon 8 of 8) protein_coding-exon (FBgn0026438, exon 8 of 8) 6694 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9247 chr3R 2685156 2685210 + 21 NA Intergenic Intergenic -4863 FBgn0001077 FBgn0001077 FBtr0081625 ftz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2619 chr2L 17167361 17167422 + 21 NA intron (FBgn0032627, intron 3 of 5) protein_coding-intron (FBgn0032627, intron 3 of 5) -4021 FBgn0083942 FBgn0083942 FBtr0110785 CG34106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4958 chr2R 9508717 9508949 + 21 NA Intergenic Intergenic -1760 FBgn0000633 FBgn0000633 FBtr0087625 fas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_318 chr2L 1621144 1621305 + 21 NA Intergenic Intergenic -7042 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12988 chr4 956338 956476 + 21 NA Intergenic Intergenic -1038 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13221 chrU 2427850 2427920 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10200 chr3R 10324612 10324690 + 21 NA Intergenic Intergenic 12783 FBgn0038233 FBgn0038233 FBtr0082987 HtrA2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7873 chr3L 13111625 13111687 + 21 NA TTS (FBgn0010452) protein_coding-TTS (FBgn0010452) 4285 FBgn0010452 FBgn0010452 FBtr0330075 trn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1968 chr2L 14411793 14411850 + 21 NA Intergenic Intergenic -2274 FBgn0004858 FBgn0004858 FBtr0080637 elB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7492 chr3L 9292057 9292111 + 21 NA Intergenic Intergenic -36705 FBgn0035975 FBgn0035975 FBtr0076433 PGRP-LA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11563 chr3R 21998063 21998315 + 21 NA intron (FBgn0051323, intron 1 of 4) protein_coding-intron (FBgn0051323, intron 1 of 4) 1618 FBgn0051323 FBgn0051323 FBtr0307339 CG31323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10850 chr3R 14754806 14754864 + 21 NA promoter-TSS (FBgn0038662) protein_coding-promoter-TSS (FBgn0038662) -83 FBgn0261262 FBgn0261262 FBtr0304686 CG42613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2741 chr2L 17764157 17764211 + 21 NA intron (FBgn0015609, intron 2 of 23) protein_coding-intron (FBgn0015609, intron 2 of 23) -11838 FBgn0015609 FBgn0015609 FBtr0100316 CadN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_59 chr2L 731987 732041 + 21 NA Intergenic Intergenic 3602 FBgn0011244 FBgn0011244 FBtr0078000 Hsp60B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6450 chr2RHet 1295157 1295277 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13551 chrX 5631490 5631551 + 21 NA exon (FBgn0052758, exon 1 of 6) protein_coding-exon (FBgn0052758, exon 1 of 6) 4736 FBgn0029795 FBgn0029795 FBtr0070806 CG15773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13448 chrX 1398299 1398468 + 21 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 1 of 10) 3459 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2824 chr2L 18038278 18038332 + 21 NA intron (FBgn0243486, intron 3 of 14) protein_coding-intron (FBgn0243486, intron 3 of 14) 25898 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10683 chr3R 13645438 13645570 + 21 NA intron (FBgn0261649, intron 2 of 9) protein_coding-intron (FBgn0261649, intron 2 of 9) 8238 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9319 chr3R 3121406 3121461 + 21 NA exon (FBgn0259172, exon 3 of 8) protein_coding-exon (FBgn0259172, exon 3 of 8) -8881 FBgn0260713 FBgn0260713 FBtr0301214 CG42544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1150 chr2L 8657524 8657764 + 21 NA intron (FBgn0011259, intron 12 of 20) protein_coding-intron (FBgn0011259, intron 12 of 21) -15508 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8552 chr3L 19163762 19163845 + 21 NA promoter-TSS (FBgn0016797) protein_coding-promoter-TSS (FBgn0016797) -55 FBgn0016797 FBgn0016797 FBtr0075029 fz2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2101 chr2L 14861519 14861706 + 21 NA Intergenic Intergenic -9863 FBgn0028886 FBgn0028886 FBtr0080686 CG15279 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12732 chr3R 27372888 27372942 + 21 NA intron (FBgn0039852, intron 1 of 8) protein_coding-intron (FBgn0039852, intron 1 of 8) 4030 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_803 chr2L 5712530 5712994 + 21 NA exon (FBgn0031730, exon 4 of 5) protein_coding-exon (FBgn0031730, exon 4 of 5) 803 FBgn0031730 FBgn0031730 FBtr0302950 CG7236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11108 chr3R 16334305 16334374 + 21 NA exon (FBgn0038799, exon 4 of 6) protein_coding-exon (FBgn0038799, exon 4 of 6) 1730 FBgn0038799 FBgn0038799 FBtr0083889 CG4288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9768 chr3R 6865635 6865689 + 21 NA exon (FBgn0083950, exon 12 of 16) protein_coding-exon (FBgn0083950, exon 12 of 16) 46457 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12291 chr3R 25113230 25113336 + 21 NA Intergenic Intergenic 9668 FBgn0039659 FBgn0039659 FBtr0085439 CG14506 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8194 chr3L 16010669 16011378 + 21 NA exon (FBgn0264601, exon 1 of 1) protein_coding-exon (FBgn0264601, exon 1 of 1) 394 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10021 chr3R 8897749 8897811 + 21 NA promoter-TSS (FBgn0004666) protein_coding-promoter-TSS (FBgn0004666) -14166 FBgn0262365 FBgn0262365 FBtr0304647 CG43063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1143 chr2L 8646551 8646797 + 21 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -26478 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_933 chr2L 6854067 6854124 + 21 NA promoter-TSS (FBgn0086451) protein_coding-promoter-TSS (FBgn0086451) -75 FBgn0086451 FBgn0086451 FBtr0079343 l(2)k09022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12185 chr3R 24571525 24571585 + 21 NA Intergenic Intergenic -1070 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2904 chr2L 18512527 18512585 + 21 NA exon (FBgn0032684, exon 4 of 4) protein_coding-exon (FBgn0032684, exon 4 of 4) 2984 FBgn0032684 FBgn0032684 FBtr0081068 CG10178 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6563 chr2RHet 1942048 1942383 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7012 chr3L 3882068 3882122 + 21 NA Intergenic Intergenic 2706 FBgn0264518 FBgn0264518 FBtr0333143 CR43917 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12034 chr3R 24021914 24021992 + 21 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 49351 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2951 chr2L 19019046 19019100 + 21 NA Intergenic Intergenic -3945 FBgn0032740 FBgn0032740 FBtr0321271 CG15172 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5633 chr2R 15613691 15613745 + 21 NA promoter-TSS (FBgn0011850) tRNA-promoter-TSS (FBgn0011850) 0 FBgn0011850 FBgn0011850 FBtr0086448 tRNA:E4:56Fc tRNA Nup98-S2-pascual-garcia2017_R1_peak_472 chr2L 3135165 3135357 + 21 NA intron (FBgn0015600, intron 1 of 10) protein_coding-intron (FBgn0015600, intron 1 of 10) 6541 FBgn0031504 FBgn0031504 FBtr0077661 CG15403 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5365 chr2R 13139555 13139609 + 21 NA intron (FBgn0261642, intron 2 of 9) protein_coding-intron (FBgn0261642, intron 2 of 9) 3027 FBgn0263708 FBgn0263708 FBtr0310349 CR43660 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6710 chr3L 377411 377470 + 21 NA promoter-TSS (FBgn0262139) protein_coding-promoter-TSS (FBgn0262139) -124 FBgn0262139 FBgn0262139 FBtr0333902 trh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2359 chr2L 15911752 15912034 + 21 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) -4995 FBgn0032577 FBgn0032577 FBtr0080792 CG13244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4089 chr2R 2797472 2797683 + 21 NA exon (FBgn0050158, exon 4 of 8) protein_coding-exon (FBgn0050158, exon 4 of 8) -13374 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4800 chr2R 8131094 8131151 + 21 NA TTS (FBgn0262889) protein_coding-TTS (FBgn0262889) 1045 FBgn0262889 FBgn0262889 FBtr0306303 CG43244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12823 chr3RHet 119813 119867 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12593 chr3R 26773449 26773728 + 21 NA Intergenic Intergenic -10764 FBgn0039811 FBgn0039811 FBtr0085751 CG15550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2979 chr2L 19207865 19207936 + 21 NA exon (FBgn0015380, exon 4 of 4) protein_coding-exon (FBgn0015380, exon 4 of 4) 17554 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3227 chr2L 20511246 20511386 + 21 NA Intergenic Intergenic 16210 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8216 chr3L 16122662 16122730 + 21 NA promoter-TSS (FBgn0011016) protein_coding-promoter-TSS (FBgn0011016) -21 FBgn0011016 FBgn0011016 FBtr0075453 SsRbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5075 chr2R 10544629 10544696 + 21 NA exon (FBgn0033952, exon 2 of 2) protein_coding-exon (FBgn0033952, exon 2 of 2) 1598 FBgn0033952 FBgn0033952 FBtr0087482 Adgf-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5916 chr2R 17857228 17857288 + 21 NA intron (FBgn0085398, intron 7 of 9) protein_coding-intron (FBgn0085398, intron 7 of 9) 1527 FBgn0054029 FBgn0054029 FBtr0100084 CG34029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1365 chr2L 9634060 9634127 + 21 NA promoter-TSS (FBgn0032136) protein_coding-promoter-TSS (FBgn0032136) -108 FBgn0032136 FBgn0032136 FBtr0303874 CG15828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1341 chr2L 9403840 9403973 + 21 NA intron (FBgn0085395, intron 2 of 10) protein_coding-intron (FBgn0085395, intron 2 of 11) -5918 FBgn0032115 FBgn0032115 FBtr0079813 CG4438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10300 chr3R 11264732 11264941 + 21 NA promoter-TSS (FBgn0000047) protein_coding-promoter-TSS (FBgn0000047) -874 FBgn0000047 FBgn0000047 FBtr0083143 Act88F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7389 chr3L 8320766 8320844 + 21 NA promoter-TSS (FBgn0085491) protein_coding-promoter-TSS (FBgn0085491) -878 FBgn0085491 FBgn0085491 FBtr0112768 CG34462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1786 chr2L 13320256 13320310 + 21 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) 10838 FBgn0264308 FBgn0264308 FBtr0331504 CG43778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1218 chr2L 8826420 8826671 + 21 NA exon (FBgn0029123, exon 1 of 1) protein_coding-exon (FBgn0029123, exon 1 of 1) 920 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9371 chr3R 3547546 3547606 + 21 NA promoter-TSS (FBgn0037512) protein_coding-promoter-TSS (FBgn0037512) -563 FBgn0037512 FBgn0037512 FBtr0081738 CG2616 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3894 chr2R 59303 59357 + 21 NA Intergenic Intergenic 16331 FBgn0262116 FBgn0262116 FBtr0111266 CG40127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8014 chr3L 14126089 14126309 + 21 NA Intergenic Intergenic -1802 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12621 chr3R 26890783 26890931 + 21 NA promoter-TSS (FBgn0024288) protein_coding-promoter-TSS (FBgn0024288) -222 FBgn0024288 FBgn0024288 FBtr0085735 Sox100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2892 chr2L 18419569 18419631 + 21 NA Intergenic Intergenic 23628 FBgn0261597 FBgn0261597 FBtr0081090 RpS26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6833 chr3L 1436722 1436790 + 21 NA exon (FBgn0043865, exon 4 of 6) protein_coding-exon (FBgn0043865, exon 4 of 6) 1116 FBgn0043865 FBgn0043865 FBtr0301788 SA-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10772 chr3R 14223096 14223187 + 21 NA promoter-TSS (FBgn0028670) protein_coding-promoter-TSS (FBgn0028670) -491 FBgn0028670 FBgn0028670 FBtr0083657 Vha100-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2307 chr2L 15601846 15601906 + 21 NA Intergenic Intergenic 10093 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8795 chr3L 23869675 23869739 + 21 NA intron (FBgn0058470, intron 9 of 12) protein_coding-intron (FBgn0058470, intron 9 of 12) 6535 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12805 chr3R 27769798 27770042 + 21 NA intron (FBgn0011224, intron 5 of 16) protein_coding-intron (FBgn0011224, intron 4 of 13) 36971 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3110 chr2L 19852173 19852227 + 21 NA intron (FBgn0263873, intron 1 of 14) protein_coding-intron (FBgn0263873, intron 2 of 15) -3901 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9402 chr3R 3776582 3776641 + 21 NA intron (FBgn0000504, intron 2 of 4) protein_coding-intron (FBgn0000504, intron 2 of 4) 16519 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12507 chr3R 26051727 26051792 + 21 NA Intergenic Intergenic 9553 FBgn0000279 FBgn0000279 FBtr0085616 CecC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6475 chr2RHet 1451611 1451665 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13485 chrX 2190584 2190659 + 21 NA intron (FBgn0003079, intron 2 of 5) protein_coding-intron (FBgn0003079, intron 2 of 5) 704 FBgn0003079 FBgn0003079 FBtr0111025 phl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7231 chr3L 6821975 6822076 + 21 NA Intergenic Intergenic 38767 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5595 chr2R 15302758 15302814 + 21 NA promoter-TSS (FBgn0050326) tRNA-promoter-TSS (FBgn0050326) 10 FBgn0050326 FBgn0050326 FBtr0086528 tRNA:CR30326 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8776 chr3L 23760931 23761105 + 21 NA Intergenic Intergenic -16313 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9148 chr3R 2092287 2092341 + 21 NA exon (FBgn0037417, exon 3 of 4) protein_coding-exon (FBgn0037417, exon 3 of 4) 2096 FBgn0037418 FBgn0037418 FBtr0078614 Osi11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10289 chr3R 11229062 11229255 + 21 NA TTS (FBgn0262483) protein_coding-TTS (FBgn0262483) 2069 FBgn0038337 FBgn0038337 FBtr0083106 CG6125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13285 chrUextra 29538 29596 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8822 chr3L 24119826 24120322 + 21 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 52745 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11277 chr3R 17884959 17885032 + 21 NA intron (FBgn0264491, intron 2 of 8) protein_coding-intron (FBgn0264491, intron 2 of 8) 17081 FBgn0264491 FBgn0264491 FBtr0084178 how protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2568 chr2L 16990249 16990303 + 21 NA exon (FBgn0053179, exon 5 of 7) protein_coding-exon (FBgn0053179, exon 5 of 7) 5298 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8196 chr3L 16012248 16012309 + 21 NA promoter-TSS (FBgn0264601) protein_coding-promoter-TSS (FBgn0264601) -861 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11976 chr3R 23826366 23826430 + 21 NA Intergenic Intergenic -9925 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9126 chr3R 1905766 1905891 + 21 NA Intergenic Intergenic -1823 FBgn0037399 FBgn0037399 FBtr0078620 Or83c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7704 chr3L 11893005 11893061 + 21 NA exon (FBgn0263615, exon 2 of 2) ncRNA-exon (FBgn0263615, exon 2 of 2) 1328 FBgn0263615 FBgn0263615 FBtr0309979 CR43624 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11583 chr3R 22112528 22112888 + 21 NA Intergenic Intergenic 24324 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6971 chr3L 3020623 3020682 + 21 NA Intergenic Intergenic -3396 FBgn0052487 FBgn0052487 FBtr0073007 CG32487 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12935 chr4 550351 550437 + 21 NA exon (FBgn0004607, exon 7 of 14) protein_coding-exon (FBgn0004607, exon 7 of 14) 27958 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2035 chr2L 14601420 14601487 + 21 NA exon (FBgn0003016, exon 10 of 11) protein_coding-exon (FBgn0003016, exon 10 of 11) 1779 FBgn0028910 FBgn0028910 FBtr0080647 tRNA:P:35Bc tRNA Nup98-S2-pascual-garcia2017_R1_peak_6656 chr2RHet 2371165 2371249 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6933 chr3L 2523874 2523942 + 21 NA intron (FBgn0010905, intron 4 of 16) protein_coding-intron (FBgn0010905, intron 4 of 15) 3065 FBgn0260480 FBgn0260480 FBtr0072962 CG32295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8131 chr3L 15331749 15331852 + 21 NA exon (FBgn0036494, exon 1 of 1) protein_coding-exon (FBgn0036494, exon 1 of 1) 2008 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6227 chr2R 20509804 20509949 + 21 NA intron (FBgn0035041, intron 5 of 7) protein_coding-intron (FBgn0035041, intron 5 of 7) 6391 FBgn0086030 FBgn0086030 FBtr0114306 snoRNA:Me18S-G393 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_12154 chr3R 24474271 24474328 + 21 NA Intergenic Intergenic 1903 FBgn0051050 FBgn0051050 FBtr0085317 CG31050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2885 chr2L 18345505 18345914 + 21 NA intron (FBgn0000636, intron 1 of 6) protein_coding-intron (FBgn0000636, intron 1 of 7) 13317 FBgn0011559 FBgn0011559 FBtr0081054 Acp36DE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6324 chr2RHet 154803 154951 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7102 chr3L 5706868 5706996 + 21 NA intron (FBgn0085447, intron 5 of 21) protein_coding-intron (FBgn0085447, intron 17 of 34) -6458 FBgn0086073 FBgn0086073 FBtr0114349 snoRNA:Me18S-A1494 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3043 chr2L 19513943 19513997 + 21 NA TTS (FBgn0032797) protein_coding-TTS (FBgn0032797) 3231 FBgn0032797 FBgn0032797 FBtr0299519 CG10186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7701 chr3L 11865151 11865205 + 21 NA promoter-TSS (FBgn0036217) protein_coding-promoter-TSS (FBgn0036217) -773 FBgn0036217 FBgn0036217 FBtr0076071 CG5906 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9218 chr3R 2571794 2571848 + 21 NA TTS (FBgn0085326) protein_coding-TTS (FBgn0085326) 1864 FBgn0085326 FBgn0085326 FBtr0112493 CG34297 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8166 chr3L 15739408 15739570 + 21 NA Intergenic Intergenic -17959 FBgn0010105 FBgn0010105 FBtr0075579 comm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8794 chr3L 23867895 23868306 + 21 NA intron (FBgn0058470, intron 9 of 12) protein_coding-intron (FBgn0058470, intron 9 of 12) 8142 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5573 chr2R 15006294 15006430 + 21 NA exon (FBgn0004168, exon 9 of 11) protein_coding-exon (FBgn0004168, exon 9 of 11) 8362 FBgn0034417 FBgn0034417 FBtr0100129 CG15117 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6596 chr2RHet 2085693 2085747 + 21 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11945 chr3R 23646122 23646176 + 21 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -24662 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2445 chr2L 16239282 16239526 + 21 NA exon (FBgn0261999, exon 10 of 11) protein_coding-exon (FBgn0261999, exon 10 of 11) -2535 FBgn0262000 FBgn0262000 FBtr0303798 CG42818 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2626 chr2L 17196879 17196960 + 21 NA exon (FBgn0032629, exon 3 of 6) protein_coding-exon (FBgn0032629, exon 3 of 6) 14981 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11071 chr3R 16167732 16167827 + 21 NA exon (FBgn0038789, exon 4 of 8) protein_coding-exon (FBgn0038789, exon 4 of 8) 2790 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1096 chr2L 8564687 8564841 + 21 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -6124 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_591 chr2L 4140512 4140566 + 21 NA Intergenic Intergenic -8740 FBgn0031585 FBgn0031585 FBtr0077468 CG2955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5225 chr2R 11792725 11792791 + 21 NA intron (FBgn0264089, intron 1 of 20) protein_coding-intron (FBgn0264089, intron 1 of 19) -8826 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5574 chr2R 15015297 15015392 + 21 NA promoter-TSS (FBgn0034417) protein_coding-promoter-TSS (FBgn0034417) -620 FBgn0034417 FBgn0034417 FBtr0100129 CG15117 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4037 chr2R 2052376 2052480 + 20 NA promoter-TSS (FBgn0011888) tRNA-promoter-TSS (FBgn0011888) 25 FBgn0011888 FBgn0011888 FBtr0086013 tRNA:K2:42Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_5951 chr2R 18168677 18168731 + 20 NA exon (FBgn0020307, exon 4 of 6) protein_coding-exon (FBgn0020307, exon 4 of 6) 10279 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8875 chr3LHet 1018937 1019098 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2856 chr2L 18185712 18185863 + 20 NA intron (FBgn0261804, intron 12 of 14) protein_coding-intron (FBgn0261804, intron 12 of 14) -1157 FBgn0032673 FBgn0032673 FBtr0081061 CG7180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3448 chr2L 21757466 21757528 + 20 NA promoter-TSS (FBgn0032961) protein_coding-promoter-TSS (FBgn0032961) -31 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9035 chr3R 1156004 1156071 + 20 NA intron (FBgn0013576, intron 1 of 14) protein_coding-intron (FBgn0013576, intron 1 of 14) 24432 FBgn0037312 FBgn0037312 FBtr0078807 CG11999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5560 chr2R 14924495 14924555 + 20 NA promoter-TSS (FBgn0034413) protein_coding-promoter-TSS (FBgn0034413) -633 FBgn0034413 FBgn0034413 FBtr0086597 CG15115 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12190 chr3R 24579593 24579805 + 20 NA Intergenic Intergenic -2386 FBgn0039596 FBgn0039596 FBtr0085315 CG10000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7189 chr3L 6386050 6386212 + 20 NA Intergenic Intergenic -7561 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5487 chr2R 14267281 14267368 + 20 NA Intergenic Intergenic 2025 FBgn0262838 FBgn0262838 FBtr0306078 CG43202 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9069 chr3R 1355085 1355297 + 20 NA exon (FBgn0010051, exon 6 of 19) protein_coding-exon (FBgn0010051, exon 6 of 19) 1890 FBgn0010051 FBgn0010051 FBtr0078687 Itp-r83A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6303 chr2RHet 58023 58080 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7131 chr3L 5986119 5986224 + 20 NA Intergenic Intergenic -4137 FBgn0052406 FBgn0052406 FBtr0077037 CG32406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_602 chr2L 4208746 4208806 + 20 NA exon (FBgn0001075, exon 6 of 9) protein_coding-exon (FBgn0001075, exon 6 of 9) -11399 FBgn0031589 FBgn0031589 FBtr0113020 CG3714 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4923 chr2R 9237049 9237103 + 20 NA Intergenic Intergenic 4897 FBgn0033828 FBgn0033828 FBtr0087721 CG17048 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13139 chrU 1046062 1046178 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7419 chr3L 8580800 8580884 + 20 NA exon (FBgn0262508, exon 3 of 6) protein_coding-exon (FBgn0262508, exon 3 of 6) 9000 FBgn0262508 FBgn0262508 FBtr0304812 CG43078 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5804 chr2R 17068751 17068805 + 20 NA promoter-TSS (FBgn0053539) tRNA-promoter-TSS (FBgn0053539) -11 FBgn0053539 FBgn0053539 FBtr0100847 tRNA:CR33539 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13224 chrU 2434310 2434660 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10403 chr3R 11903133 11903208 + 20 NA exon (FBgn0026059, exon 11 of 18) protein_coding-exon (FBgn0026059, exon 11 of 18) -1284 FBgn0026059 FBgn0026059 FBtr0303845 Mhcl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7404 chr3L 8388972 8389035 + 20 NA promoter-TSS (FBgn0035888) protein_coding-promoter-TSS (FBgn0035888) -97 FBgn0035888 FBgn0035888 FBtr0307378 CG7120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3269 chr2L 20686931 20687010 + 20 NA exon (FBgn0014859, exon 5 of 5) protein_coding-exon (FBgn0014859, exon 5 of 5) 4600 FBgn0032877 FBgn0032877 FBtr0081391 CG2617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2477 chr2L 16501326 16501395 + 20 NA promoter-TSS (FBgn0032586) protein_coding-promoter-TSS (FBgn0032586) 9820 FBgn0032586 FBgn0032586 FBtr0333486 Tpr2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7572 chr3L 10598782 10598836 + 20 NA Intergenic Intergenic 17867 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4542 chr2R 6234649 6234715 + 20 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 4984 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10846 chr3R 14720131 14720185 + 20 NA Intergenic Intergenic -3685 FBgn0038655 FBgn0038655 FBtr0083696 CG14297 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6594 chr2RHet 2074232 2074299 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1705 chr2L 12763691 12763745 + 20 NA Intergenic Intergenic -1878 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2543 chr2L 16927303 16927359 + 20 NA Intergenic Intergenic -17022 FBgn0026150 FBgn0026150 FBtr0304931 ApepP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4848 chr2R 8667391 8667445 + 20 NA promoter-TSS (FBgn0003326) protein_coding-promoter-TSS (FBgn0003326) -631 FBgn0003326 FBgn0003326 FBtr0087855 sca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2102 chr2L 14869549 14869603 + 20 NA TTS (FBgn0032553) protein_coding-TTS (FBgn0032553) 2446 FBgn0032553 FBgn0032553 FBtr0304004 CG4480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10025 chr3R 8905553 8905607 + 20 NA Intergenic Intergenic -6366 FBgn0262365 FBgn0262365 FBtr0304647 CG43063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2597 chr2L 17082965 17083128 + 20 NA Intergenic Intergenic -2604 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11690 chr3R 22507886 22508130 + 20 NA promoter-TSS (FBgn0250908) protein_coding-promoter-TSS (FBgn0250908) -320 FBgn0250908 FBgn0250908 FBtr0290328 beat-VII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5115 chr2R 10834280 10834343 + 20 NA exon (FBgn0261854, exon 8 of 10) protein_coding-exon (FBgn0261854, exon 8 of 10) 2941 FBgn0261854 FBgn0261854 FBtr0303437 aPKC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3549 chr2L 21974936 21975172 + 20 NA Intergenic Intergenic 17879 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_154 chr2L 1033082 1033236 + 20 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) 1423 FBgn0031294 FBgn0031294 FBtr0332270 IA-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4993 chr2R 9714328 9714392 + 20 NA promoter-TSS (FBgn0033872) protein_coding-promoter-TSS (FBgn0033872) -106 FBgn0033872 FBgn0033872 FBtr0087635 CG6329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4558 chr2R 6271333 6271428 + 20 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) -3766 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2858 chr2L 18195658 18195712 + 20 NA intron (FBgn0261804, intron 10 of 14) protein_coding-intron (FBgn0261804, intron 10 of 14) -4651 FBgn0263332 FBgn0263332 FBtr0308755 CR43413 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1141 chr2L 8645026 8645196 + 20 NA exon (FBgn0011259, exon 6 of 22) protein_coding-exon (FBgn0011259, exon 6 of 22) 25083 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9887 chr3R 7947036 7947142 + 20 NA TTS (FBgn0037992) protein_coding-TTS (FBgn0037992) 6830 FBgn0037992 FBgn0037992 FBtr0308294 CG4702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11711 chr3R 22562442 22562496 + 20 NA promoter-TSS (FBgn0039454) protein_coding-promoter-TSS (FBgn0039454) -451 FBgn0039453 FBgn0039453 FBtr0085044 CG6403 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6496 chr2RHet 1713888 1713945 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3997 chr2R 1353626 1353858 + 20 NA Intergenic Intergenic 29599 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4790 chr2R 8061809 8061863 + 20 NA promoter-TSS (FBgn0010621) protein_coding-promoter-TSS (FBgn0010621) -765 FBgn0010621 FBgn0010621 FBtr0087988 Cct5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11480 chr3R 21670816 21670876 + 20 NA Intergenic Intergenic 6167 FBgn0040602 FBgn0040602 FBtr0084913 CG14545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9023 chr3R 963916 964009 + 20 NA promoter-TSS (FBgn0040684) protein_coding-promoter-TSS (FBgn0040684) -667 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7503 chr3L 9568848 9568912 + 20 NA intron (FBgn0261555, intron 3 of 9) protein_coding-intron (FBgn0261555, intron 3 of 9) -22074 FBgn0036013 FBgn0036013 FBtr0076378 CG14177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2181 chr2L 15171082 15171136 + 20 NA intron (FBgn0028888, intron 3 of 5) protein_coding-intron (FBgn0028888, intron 3 of 5) 29300 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6921 chr3L 2318015 2318078 + 20 NA Intergenic Intergenic -4647 FBgn0035331 FBgn0035331 FBtr0330187 DmsR-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5613 chr2R 15490793 15491123 + 20 NA intron (FBgn0003435, intron 2 of 10) protein_coding-intron (FBgn0003435, intron 2 of 9) 9663 FBgn0034459 FBgn0034459 FBtr0300829 CG16716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10137 chr3R 9725724 9725817 + 20 NA Intergenic Intergenic -1811 FBgn0000576 FBgn0000576 FBtr0082863 ems protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13258 chrU 5508948 5509013 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13817 chrX 18598092 18598154 + 20 NA Intergenic Intergenic -5775 FBgn0030949 FBgn0030949 FBtr0074604 Cyp308a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2364 chr2L 15939581 15939827 + 20 NA exon (FBgn0028645, exon 2 of 7) protein_coding-exon (FBgn0028645, exon 2 of 7) -1737 FBgn0028857 FBgn0028857 FBtr0300613 CG12448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6274 chr2R 20974595 20974649 + 20 NA exon (FBgn0003715, exon 4 of 4) protein_coding-exon (FBgn0003715, exon 4 of 4) -2779 FBgn0004919 FBgn0004919 FBtr0306330 gol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13845 chrX 21216328 21216384 + 20 NA promoter-TSS (FBgn0015379) protein_coding-promoter-TSS (FBgn0015379) -19 FBgn0015379 FBgn0015379 FBtr0077193 dod protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6373 chr2RHet 558697 558884 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9621 chr3R 5649891 5650042 + 20 NA promoter-TSS (FBgn0085331) protein_coding-promoter-TSS (FBgn0085331) -421 FBgn0085331 FBgn0085331 FBtr0301078 CG34302 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6247 chr2R 20730543 20730597 + 20 NA Intergenic Intergenic -5929 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_166 chr2L 1092206 1092279 + 20 NA intron (FBgn0031299, intron 1 of 7) protein_coding-intron (FBgn0031299, intron 2 of 8) 10262 FBgn0031299 FBgn0031299 FBtr0332571 CG4629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_452 chr2L 2939240 2939294 + 20 NA intron (FBgn0041111, intron 3 of 12) protein_coding-intron (FBgn0041111, intron 3 of 12) -17644 FBgn0010263 FBgn0010263 FBtr0077640 Rbp9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13147 chrU 1092119 1092408 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3528 chr2L 21951445 21951499 + 20 NA Intergenic Intergenic 35111 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3460 chr2L 21776036 21776243 + 20 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) 7926 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6621 chr2RHet 2238728 2238854 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_701 chr2L 4823867 4823921 + 20 NA intron (FBgn0031632, intron 1 of 4) protein_coding-intron (FBgn0031632, intron 1 of 4) 2118 FBgn0031632 FBgn0031632 FBtr0077384 CG15628 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13229 chrU 2647837 2648372 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11015 chr3R 15857508 15857562 + 20 NA promoter-TSS (FBgn0038768) protein_coding-promoter-TSS (FBgn0038768) -7 FBgn0038768 FBgn0038768 FBtr0083831 CG4936 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6599 chr2RHet 2132592 2132682 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6077 chr2R 19270917 19270979 + 20 NA promoter-TSS (FBgn0040660) protein_coding-promoter-TSS (FBgn0040660) -96 FBgn0040660 FBgn0040660 FBtr0072035 CG13551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13010 chr4 1021763 1022134 + 20 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 11597 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10475 chr3R 12317468 12317684 + 20 NA intron (FBgn0038439, intron 3 of 11) protein_coding-intron (FBgn0038439, intron 3 of 11) 3565 FBgn0038439 FBgn0038439 FBtr0301702 Cad89D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_955 chr2L 7074262 7074361 + 20 NA exon (FBgn0031888, exon 3 of 5) protein_coding-exon (FBgn0031888, exon 3 of 5) 6328 FBgn0031887 FBgn0031887 FBtr0289952 CG11289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8231 chr3L 16250535 16250743 + 20 NA promoter-TSS (FBgn0036584) protein_coding-promoter-TSS (FBgn0036584) -348 FBgn0036584 FBgn0036584 FBtr0075481 CG13054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8361 chr3L 17257716 17257925 + 20 NA TTS (FBgn0264462) ncRNA-TTS (FBgn0264462) 304 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1780 chr2L 13277385 13277563 + 20 NA promoter-TSS (FBgn0032498) protein_coding-promoter-TSS (FBgn0032498) 98 FBgn0032498 FBgn0032498 FBtr0080459 CG6108 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9002 chr3R 796504 796563 + 20 NA Intergenic Intergenic 5366 FBgn0037290 FBgn0037290 FBtr0078841 CG1124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11284 chr3R 17962424 17962665 + 20 NA intron (FBgn0051163, intron 1 of 18) protein_coding-intron (FBgn0051163, intron 1 of 18) 2987 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11824 chr3R 23189879 23190048 + 20 NA exon (FBgn0260487, exon 4 of 7) protein_coding-exon (FBgn0260487, exon 4 of 7) 4851 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6203 chr2R 20317376 20317987 + 20 NA exon (FBgn0035003, exon 2 of 3) protein_coding-exon (FBgn0035003, exon 2 of 3) 455 FBgn0035003 FBgn0035003 FBtr0072357 CG15873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9589 chr3R 5153864 5153918 + 20 NA intron (FBgn0037676, intron 1 of 3) protein_coding-intron (FBgn0037676, intron 1 of 3) 336 FBgn0037676 FBgn0037676 FBtr0301210 CG8861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5019 chr2R 9960231 9960285 + 20 NA intron (FBgn0040752, intron 3 of 11) protein_coding-intron (FBgn0040752, intron 3 of 11) -17572 FBgn0259183 FBgn0259183 FBtr0299667 CG42287 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3956 chr2R 838383 838533 + 20 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 1286 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3249 chr2L 20572242 20572323 + 20 NA Intergenic Intergenic 9858 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6735 chr3L 614632 615031 + 20 NA TTS (FBgn0261636) protein_coding-TTS (FBgn0261636) 1815 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6066 chr2R 19181751 19181822 + 20 NA Intergenic Intergenic 9983 FBgn0034841 FBgn0034841 FBtr0072001 CG13541 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5504 chr2R 14397876 14397942 + 20 NA Intergenic Intergenic -4220 FBgn0262476 FBgn0262476 FBtr0304867 CG43066 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8388 chr3L 17442514 17442658 + 20 NA exon (FBgn0036725, exon 2 of 2) protein_coding-exon (FBgn0036725, exon 2 of 2) 2937 FBgn0036725 FBgn0036725 FBtr0333689 CG18265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_736 chr2L 5326706 5326780 + 20 NA promoter-TSS (FBgn0015031) protein_coding-promoter-TSS (FBgn0015031) -60 FBgn0031698 FBgn0031698 FBtr0307040 Ncoa6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10991 chr3R 15696468 15696705 + 20 NA exon (FBgn0038740, exon 7 of 9) protein_coding-exon (FBgn0038740, exon 7 of 9) 4355 FBgn0038740 FBgn0038740 FBtr0113250 CG4562 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7247 chr3L 6936575 6936647 + 20 NA intron (FBgn0035719, intron 1 of 6) protein_coding-intron (FBgn0035719, intron 1 of 6) 655 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5080 chr2R 10562382 10562436 + 20 NA TTS (FBgn0050480) protein_coding-TTS (FBgn0050480) 3232 FBgn0050479 FBgn0050479 FBtr0332468 CG30479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3056 chr2L 19631547 19631662 + 20 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 44981 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11605 chr3R 22175360 22175577 + 20 NA exon (FBgn0053970, exon 4 of 9) protein_coding-exon (FBgn0053970, exon 4 of 9) -4273 FBgn0039421 FBgn0039421 FBtr0085027 CG6036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2677 chr2L 17359370 17359554 + 20 NA Intergenic Intergenic -4034 FBgn0051804 FBgn0051804 FBtr0080967 CG31804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3567 chr2L 22011610 22011741 + 20 NA Intergenic Intergenic -3556 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4259 chr2R 4250343 4250398 + 20 NA promoter-TSS (FBgn0050364) protein_coding-promoter-TSS (FBgn0050364) 353 FBgn0250827 FBgn0250827 FBtr0112411 whip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8540 chr3L 19035119 19035174 + 20 NA intron (FBgn0002945, intron 1 of 3) protein_coding-intron (FBgn0002945, intron 1 of 4) 3403 FBgn0002945 FBgn0002945 FBtr0332650 nkd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1928 chr2L 14314242 14314310 + 20 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -14153 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3947 chr2R 825675 825734 + 20 NA Intergenic Intergenic -11468 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2283 chr2L 15529554 15529754 + 20 NA Intergenic Intergenic 7216 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13041 chrU 36542 36635 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13630 chrX 9535281 9535365 + 20 NA promoter-TSS (FBgn0028341) protein_coding-promoter-TSS (FBgn0028341) -666 FBgn0028341 FBgn0028341 FBtr0303559 l(1)G0232 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2470 chr2L 16437819 16437928 + 20 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -7407 FBgn0020416 FBgn0020416 FBtr0080860 Idgf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_854 chr2L 6148266 6148503 + 20 NA Intergenic Intergenic -3587 FBgn0040950 FBgn0040950 FBtr0079203 Muc26B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3793 chr2L 22651132 22651358 + 20 NA Intergenic Intergenic -2164 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13629 chrX 9479650 9479725 + 20 NA promoter-TSS (FBgn0001186) protein_coding-promoter-TSS (FBgn0001186) -236 FBgn0001186 FBgn0001186 FBtr0071362 Hex-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9927 chr3R 8187161 8187222 + 20 NA intron (FBgn0038017, intron 2 of 2) protein_coding-intron (FBgn0038017, intron 2 of 2) -1447 FBgn0065094 FBgn0065094 FBtr0091921 snmRNA:419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3498 chr2L 21866552 21866657 + 20 NA Intergenic Intergenic -27623 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5185 chr2R 11386150 11386211 + 20 NA promoter-TSS (FBgn0034023) protein_coding-promoter-TSS (FBgn0034023) -957 FBgn0034023 FBgn0034023 FBtr0273302 Ir52a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1559 chr2L 11644293 11644347 + 20 NA TTS (FBgn0032369) protein_coding-TTS (FBgn0032369) 4519 FBgn0032369 FBgn0032369 FBtr0080267 CG6614 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7111 chr3L 5815954 5816008 + 20 NA intron (FBgn0003984, intron 1 of 5) protein_coding-intron (FBgn0003984, intron 1 of 5) -9788 FBgn0035640 FBgn0035640 FBtr0077113 mad2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2961 chr2L 19084721 19084775 + 20 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -5720 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7620 chr3L 10898898 10898964 + 20 NA Intergenic Intergenic -6708 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5679 chr2R 15921287 15921530 + 20 NA Intergenic Intergenic -28916 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3219 chr2L 20490009 20490145 + 20 NA Intergenic Intergenic 2581 FBgn0262455 FBgn0262455 FBtr0304488 mir-1 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10770 chr3R 14202723 14202777 + 20 NA Intergenic Intergenic 4147 FBgn0038610 FBgn0038610 FBtr0083583 CG7675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12841 chr3RHet 630509 630563 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13503 chrX 3130523 3130577 + 20 NA exon (FBgn0040393, exon 1 of 1) protein_coding-exon (FBgn0040393, exon 1 of 1) 169 FBgn0040393 FBgn0040393 FBtr0070541 CG14265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2351 chr2L 15880438 15880534 + 20 NA promoter-TSS (FBgn0028935) protein_coding-promoter-TSS (FBgn0028935) -421 FBgn0028935 FBgn0028935 FBtr0306681 CG7653 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13062 chrU 81134 81188 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1719 chr2L 12815607 12815764 + 20 NA Intergenic Intergenic 7102 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3955 chr2R 836191 836609 + 20 NA promoter-TSS (FBgn0040849) protein_coding-promoter-TSS (FBgn0040849) -772 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3794 chr2L 22652511 22652846 + 20 NA Intergenic Intergenic -3597 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6938 chr3L 2658022 2658171 + 20 NA intron (FBgn0264606, intron 16 of 16) protein_coding-intron (FBgn0264606, intron 17 of 17) -1543 FBgn0053233 FBgn0053233 FBtr0301038 CG33233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13080 chrU 154168 154246 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_616 chr2L 4297739 4297802 + 20 NA intron (FBgn0010473, intron 3 of 12) protein_coding-intron (FBgn0010473, intron 3 of 6) 14622 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1241 chr2L 8863768 8863941 + 20 NA promoter-TSS (FBgn0052987) protein_coding-promoter-TSS (FBgn0052987) 43 FBgn0052987 FBgn0052987 FBtr0079735 CG32987 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10159 chr3R 9923468 9923610 + 20 NA promoter-TSS (FBgn0038199) protein_coding-promoter-TSS (FBgn0038199) 263 FBgn0038200 FBgn0038200 FBtr0082917 CG9920 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8092 chr3L 14871295 14871359 + 20 NA exon (FBgn0036454, exon 14 of 19) protein_coding-exon (FBgn0036454, exon 14 of 19) 16189 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_620 chr2L 4311014 4311210 + 20 NA intron (FBgn0010473, intron 9 of 12) protein_coding-intron (FBgn0010473, intron 9 of 9) -13461 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12052 chr3R 24058579 24058740 + 20 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 30685 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12077 chr3R 24171157 24171243 + 20 NA TTS (FBgn0039581) protein_coding-TTS (FBgn0039581) 5140 FBgn0039581 FBgn0039581 FBtr0300346 Moca-cyp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8398 chr3L 17558652 17558760 + 20 NA TTS (FBgn0086080) snoRNA-TTS (FBgn0086080) 556 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6317 chr2RHet 135605 135798 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8998 chr3R 767581 767635 + 20 NA exon (FBgn0051536, exon 11 of 13) protein_coding-exon (FBgn0051536, exon 11 of 13) 6210 FBgn0004183 FBgn0004183 FBtr0078851 snRNA:U1:82Eb snRNA Nup98-S2-pascual-garcia2017_R1_peak_7864 chr3L 13075451 13075540 + 20 NA exon (FBgn0263661, exon 1 of 1) ncRNA-exon (FBgn0263661, exon 1 of 1) 257 FBgn0263661 FBgn0263661 FBtr0310106 CR43652 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2401 chr2L 16049017 16049313 + 20 NA promoter-TSS (FBgn0013433) protein_coding-promoter-TSS (FBgn0013433) -830 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13039 chrU 28445 28691 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2968 chr2L 19106455 19106509 + 20 NA promoter-TSS (FBgn0002023) protein_coding-promoter-TSS (FBgn0002023) 1303 FBgn0002023 FBgn0002023 FBtr0309834 Lim3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12200 chr3R 24601384 24602443 + 20 NA Intergenic Intergenic -13426 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7050 chr3L 4474000 4474138 + 20 NA exon (FBgn0035550, exon 2 of 2) protein_coding-exon (FBgn0035550, exon 2 of 2) 1001 FBgn0035550 FBgn0035550 FBtr0303005 CG11349 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9436 chr3R 4014845 4014906 + 20 NA Intergenic Intergenic -7711 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11915 chr3R 23542337 23542421 + 20 NA Intergenic Intergenic 9555 FBgn0039544 FBgn0039544 FBtr0300766 CG12877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6567 chr2RHet 1946359 1946889 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12485 chr3R 25806285 25806425 + 20 NA Intergenic Intergenic -2819 FBgn0039728 FBgn0039728 FBtr0085545 CG7896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1882 chr2L 14088470 14088764 + 20 NA intron (FBgn0028875, intron 12 of 13) protein_coding-intron (FBgn0028875, intron 12 of 13) -15866 FBgn0028904 FBgn0028904 FBtr0080596 CG16879 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7621 chr3L 10906805 10906859 + 20 NA Intergenic Intergenic -14609 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1043 chr2L 8052187 8052428 + 20 NA exon (FBgn0031981, exon 6 of 6) protein_coding-exon (FBgn0031981, exon 6 of 6) 8836 FBgn0031981 FBgn0031981 FBtr0079541 CG7466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9463 chr3R 4284989 4285043 + 20 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 18299 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_897 chr2L 6574886 6575058 + 20 NA exon (FBgn0031835, exon 13 of 16) protein_coding-exon (FBgn0031835, exon 13 of 16) -8385 FBgn0031834 FBgn0031834 FBtr0079330 CG13766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1452 chr2L 10668167 10668247 + 20 NA exon (FBgn0051871, exon 2 of 5) protein_coding-exon (FBgn0051871, exon 2 of 5) 6120 FBgn0051871 FBgn0051871 FBtr0080104 CG31871 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10058 chr3R 9196936 9196990 + 20 NA TTS (FBgn0038142) protein_coding-TTS (FBgn0038142) 663 FBgn0023495 FBgn0023495 FBtr0082771 Lip3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8901 chr3LHet 1362839 1362938 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3657 chr2L 22214063 22214224 + 20 NA intron (FBgn0259683, intron 1 of 6) protein_coding-intron (FBgn0259683, intron 1 of 6) 122 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5463 chr2R 14088592 14088677 + 20 NA Intergenic Intergenic -6626 FBgn0050114 FBgn0050114 FBtr0086753 CG30114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9194 chr3R 2446714 2447079 + 20 NA Intergenic Intergenic 6726 FBgn0037460 FBgn0037460 FBtr0081701 sowi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7205 chr3L 6534402 6534456 + 20 NA intron (FBgn0020251, intron 3 of 5) protein_coding-intron (FBgn0020251, intron 4 of 6) -9409 FBgn0042185 FBgn0042185 FBtr0076974 CG18769 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10404 chr3R 11904879 11904989 + 20 NA exon (FBgn0052855, exon 1 of 1) protein_coding-exon (FBgn0052855, exon 1 of 1) 1786 FBgn0052855 FBgn0052855 FBtr0083234 CG32855 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12794 chr3R 27709385 27709453 + 20 NA intron (FBgn0011224, intron 5 of 14) protein_coding-intron (FBgn0011224, intron 4 of 13) 57853 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12193 chr3R 24581960 24582374 + 20 NA TTS (FBgn0039598) protein_coding-TTS (FBgn0039598) 534 FBgn0039597 FBgn0039597 FBtr0085314 CG9997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11523 chr3R 21804059 21804151 + 20 NA exon (FBgn0259146, exon 3 of 3) protein_coding-exon (FBgn0259146, exon 3 of 3) -4630 FBgn0015269 FBgn0015269 FBtr0084952 Nf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6743 chr3L 622679 622780 + 20 NA promoter-TSS (FBgn0263042) protein_coding-promoter-TSS (FBgn0263042) -413 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8200 chr3L 16016218 16016604 + 20 NA promoter-TSS (FBgn0044028) protein_coding-promoter-TSS (FBgn0044028) -169 FBgn0044028 FBgn0044028 FBtr0075435 Notum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2573 chr2L 17001682 17001920 + 20 NA Intergenic Intergenic 11253 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12498 chr3R 25979037 25979192 + 20 NA TTS (FBgn0039748) protein_coding-TTS (FBgn0039748) 1333 FBgn0039748 FBgn0039748 FBtr0085567 CG15529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6625 chr2RHet 2243992 2244188 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10586 chr3R 12990185 12990636 + 20 NA Intergenic Intergenic -4740 FBgn0038492 FBgn0038492 FBtr0083413 Mur89F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8387 chr3L 17437736 17437840 + 20 NA intron (FBgn0036725, intron 1 of 1) protein_coding-intron (FBgn0036725, intron 1 of 1) -1861 FBgn0036725 FBgn0036725 FBtr0333689 CG18265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13269 chrU 6291799 6291892 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4323 chr2R 4691959 4692173 + 20 NA intron (FBgn0024189, intron 1 of 21) protein_coding-intron (FBgn0024189, intron 1 of 20) 6044 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12425 chr3R 25533183 25533266 + 20 NA Intergenic Intergenic -7037 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6423 chr2RHet 919266 919352 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9488 chr3R 4457003 4457066 + 20 NA Intergenic Intergenic 4566 FBgn0026399 FBgn0026399 FBtr0310300 Or85e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6745 chr3L 623518 623647 + 20 NA Intergenic Intergenic -1266 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4001 chr2R 1465686 1465775 + 20 NA Intergenic Intergenic 26603 FBgn0039969 FBgn0039969 FBtr0273211 Fis1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11337 chr3R 18838500 18838555 + 20 NA exon (FBgn0039038, exon 2 of 4) protein_coding-exon (FBgn0039038, exon 2 of 4) 393 FBgn0039038 FBgn0039038 FBtr0084343 CG6688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3954 chr2R 835820 835961 + 20 NA Intergenic Intergenic -1282 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10120 chr3R 9658638 9658692 + 20 NA Intergenic Intergenic 4975 FBgn0262992 FBgn0262992 FBtr0306832 CR43300 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13194 chrU 1974810 1974937 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12059 chr3R 24096099 24096156 + 20 NA Intergenic Intergenic -5632 FBgn0262587 FBgn0262587 FBtr0305116 CG43124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10718 chr3R 13873252 13873306 + 20 NA exon (FBgn0010389, exon 2 of 2) protein_coding-exon (FBgn0010389, exon 2 of 2) 1804 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6542 chr2RHet 1911084 1911429 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9143 chr3R 2067480 2067534 + 20 NA Intergenic Intergenic 7076 FBgn0027527 FBgn0027527 FBtr0078596 Osi6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_976 chr2L 7225022 7225100 + 20 NA exon (FBgn0259111, exon 11 of 11) protein_coding-exon (FBgn0259111, exon 11 of 11) -1980 FBgn0263133 FBgn0263133 FBtr0079413 ico protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6115 chr2R 19554484 19554712 + 20 NA promoter-TSS (FBgn0034886) protein_coding-promoter-TSS (FBgn0034886) -5387 FBgn0250870 FBgn0250870 FBtr0290304 CG42241 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5711 chr2R 16123936 16124084 + 20 NA exon (FBgn0034485, exon 1 of 5) protein_coding-exon (FBgn0034485, exon 1 of 5) 270 FBgn0034485 FBgn0034485 FBtr0086315 CG11099 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8197 chr3L 16012731 16013125 + 20 NA TTS (FBgn0264600) protein_coding-TTS (FBgn0264600) -1511 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9261 chr3R 2761783 2761839 + 20 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 2 of 6) -3249 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7164 chr3L 6229966 6230155 + 20 NA exon (FBgn0035695, exon 5 of 9) protein_coding-exon (FBgn0035695, exon 5 of 9) 2031 FBgn0035695 FBgn0035695 FBtr0332068 CG10226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11771 chr3R 22912292 22912624 + 20 NA promoter-TSS (FBgn0039480) protein_coding-promoter-TSS (FBgn0039480) 1042 FBgn0039480 FBgn0039480 FBtr0085136 Cpr97Ea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8008 chr3L 14112957 14113028 + 20 NA intron (FBgn0042630, intron 3 of 6) protein_coding-intron (FBgn0042630, intron 3 of 6) 11405 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4778 chr2R 7967057 7967111 + 20 NA promoter-TSS (FBgn0033679) protein_coding-promoter-TSS (FBgn0033679) -36 FBgn0033679 FBgn0033679 FBtr0088022 CG8888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4974 chr2R 9604316 9604370 + 20 NA intron (FBgn0000633, intron 7 of 12) protein_coding-intron (FBgn0000633, intron 7 of 12) -23469 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13 chr2L 230834 230889 + 20 NA exon (FBgn0086902, exon 7 of 18) protein_coding-exon (FBgn0086902, exon 7 of 18) 1392 FBgn0263465 FBgn0263465 FBtr0309764 snoRNA:kis-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_13473 chrX 1715889 1715946 + 20 NA exon (FBgn0029590, exon 2 of 2) protein_coding-exon (FBgn0029590, exon 2 of 2) 497 FBgn0029590 FBgn0029590 FBtr0309970 CG14811 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8363 chr3L 17263840 17264104 + 20 NA Intergenic Intergenic 6456 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2872 chr2L 18284316 18284407 + 20 NA TTS (FBgn0051787) protein_coding-TTS (FBgn0051787) 1323 FBgn0051787 FBgn0051787 FBtr0081055 CG31787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3557 chr2L 21993710 21993767 + 20 NA promoter-TSS (FBgn0032969) protein_coding-promoter-TSS (FBgn0032969) -805 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2316 chr2L 15626355 15626599 + 20 NA Intergenic Intergenic -2207 FBgn0028945 FBgn0028945 FBtr0080754 CG7631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12638 chr3R 26968301 26968383 + 20 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 8228 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11163 chr3R 16803583 16803853 + 20 NA promoter-TSS (FBgn0013995) protein_coding-promoter-TSS (FBgn0013995) -287 FBgn0013995 FBgn0013995 FBtr0309202 Calx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9212 chr3R 2546707 2546792 + 20 NA intron (FBgn0051481, intron 2 of 7) protein_coding-intron (FBgn0051481, intron 3 of 8) 16945 FBgn0004783 FBgn0004783 FBtr0081691 Ccp84Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3242 chr2L 20550029 20550083 + 20 NA Intergenic Intergenic -12368 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8856 chr3LHet 632375 632429 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11275 chr3R 17787567 17787630 + 20 NA intron (FBgn0264490, intron 3 of 6) protein_coding-intron (FBgn0264490, intron 3 of 6) -13750 FBgn0264490 FBgn0264490 FBtr0330384 Eip93F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7500 chr3L 9518830 9518884 + 20 NA promoter-TSS (FBgn0053700) protein_coding-promoter-TSS (FBgn0053700) -213 FBgn0053700 FBgn0053700 FBtr0301069 CG33700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4865 chr2R 8781989 8782139 + 20 NA intron (FBgn0003975, intron 4 of 7) protein_coding-intron (FBgn0003975, intron 4 of 7) 10358 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1338 chr2L 9373214 9373551 + 20 NA exon (FBgn0085395, exon 12 of 12) protein_coding-exon (FBgn0085395, exon 12 of 12) 1280 FBgn0264447 FBgn0264447 FBtr0332596 CR43865 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_692 chr2L 4780540 4780642 + 20 NA intron (FBgn0031627, intron 1 of 6) protein_coding-intron (FBgn0031627, intron 1 of 6) 13449 FBgn0031627 FBgn0031627 FBtr0077418 CG15630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_28 chr2L 345279 345407 + 20 NA exon (FBgn0004611, exon 17 of 17) protein_coding-exon (FBgn0004611, exon 17 of 17) 12531 FBgn0031250 FBgn0031250 FBtr0330651 Ent1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_997 chr2L 7409765 7409829 + 20 NA promoter-TSS (FBgn0031909) protein_coding-promoter-TSS (FBgn0031909) 12 FBgn0031909 FBgn0031909 FBtr0079467 CG5181 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7359 chr3L 8021672 8021744 + 20 NA promoter-TSS (FBgn0052370) tRNA-promoter-TSS (FBgn0052370) 10 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7968 chr3L 13782912 13782966 + 20 NA intron (FBgn0264001, intron 1 of 13) protein_coding-intron (FBgn0264001, intron 1 of 13) 13561 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7719 chr3L 11953732 11953862 + 20 NA exon (FBgn0028573, exon 7 of 9) protein_coding-exon (FBgn0028573, exon 7 of 9) 2406 FBgn0262986 FBgn0262986 FBtr0306824 CG43294 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6065 chr2R 19168847 19169003 + 20 NA Intergenic Intergenic 2711 FBgn0034840 FBgn0034840 FBtr0072046 CG3124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5096 chr2R 10678185 10678272 + 20 NA intron (FBgn0001319, intron 3 of 10) protein_coding-intron (FBgn0001319, intron 3 of 10) 6304 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7003 chr3L 3560341 3560395 + 20 NA intron (FBgn0005640, intron 2 of 10) protein_coding-intron (FBgn0005640, intron 2 of 10) -33455 FBgn0053504 FBgn0053504 FBtr0100848 snRNA:U7 snRNA Nup98-S2-pascual-garcia2017_R1_peak_9229 chr3R 2615276 2615333 + 20 NA Intergenic Intergenic -2254 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10201 chr3R 10328756 10328827 + 20 NA Intergenic Intergenic 8643 FBgn0038233 FBgn0038233 FBtr0082987 HtrA2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6312 chr2RHet 108904 108974 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2246 chr2L 15424632 15424744 + 20 NA exon (FBgn0001983, exon 2 of 2) protein_coding-exon (FBgn0001983, exon 2 of 2) 897 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9 chr2L 52817 52871 + 20 NA intron (FBgn0051973, intron 3 of 14) protein_coding-intron (FBgn0051973, intron 2 of 12) 6424 FBgn0051973 FBgn0051973 FBtr0309229 Cda5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8819 chr3L 24117657 24117777 + 20 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 50388 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12982 chr4 939217 939332 + 20 NA exon (FBgn0023213, exon 9 of 16) protein_coding-exon (FBgn0023213, exon 9 of 16) 11458 FBgn0263093 FBgn0263093 FBtr0307112 CR43361 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6552 chr2RHet 1923312 1923410 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4549 chr2R 6246039 6246557 + 20 NA intron (FBgn0261698, intron 1 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) -1420 FBgn0263270 FBgn0263270 FBtr0308492 CG43396 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5094 chr2R 10632085 10632139 + 20 NA intron (FBgn0033958, intron 1 of 4) protein_coding-intron (FBgn0033958, intron 1 of 4) 722 FBgn0033958 FBgn0033958 FBtr0087476 CG12858 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2827 chr2L 18049984 18050183 + 20 NA intron (FBgn0243486, intron 3 of 14) protein_coding-intron (FBgn0243486, intron 3 of 14) -28186 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10860 chr3R 14798088 14798142 + 20 NA exon (FBgn0261262, exon 15 of 19) protein_coding-exon (FBgn0261262, exon 15 of 19) 6416 FBgn0038665 FBgn0038665 FBtr0304691 CG12269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12264 chr3R 24931404 24931461 + 20 NA exon (FBgn0039633, exon 9 of 9) protein_coding-exon (FBgn0039633, exon 9 of 9) 7110 FBgn0039634 FBgn0039634 FBtr0085416 CG11874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1490 chr2L 11081456 11081694 + 20 NA promoter-TSS (FBgn0032336) protein_coding-promoter-TSS (FBgn0032336) -173 FBgn0032336 FBgn0032336 FBtr0301761 Ast-C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1005 chr2L 7587027 7587132 + 20 NA Intergenic Intergenic 5147 FBgn0083141 FBgn0083141 FBtr0079470 Spn7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13733 chrX 13787784 13787990 + 20 NA intron (FBgn0263115, intron 3 of 7) protein_coding-intron (FBgn0263115, intron 2 of 4) -36730 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9626 chr3R 5688668 5688742 + 20 NA intron (FBgn0037766, intron 2 of 2) protein_coding-intron (FBgn0037766, intron 2 of 2) 5137 FBgn0037766 FBgn0037766 FBtr0330082 Teh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3818 chr2L 22713507 22714202 + 20 NA Intergenic Intergenic 22443 FBgn0262947 FBgn0262947 FBtr0306552 CG43266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_454 chr2L 2962812 2963043 + 20 NA intron (FBgn0010263, intron 6 of 7) protein_coding-intron (FBgn0010263, intron 7 of 8) 6016 FBgn0010263 FBgn0010263 FBtr0077640 Rbp9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13315 chrUextra 492781 492835 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6962 chr3L 2944146 2944200 + 20 NA exon (FBgn0262593, exon 6 of 6) protein_coding-exon (FBgn0262593, exon 6 of 6) 7445 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13161 chrU 1280602 1280715 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10467 chr3R 12242100 12242181 + 20 NA Intergenic Intergenic 8642 FBgn0051497 FBgn0051497 FBtr0083317 tRNA:CR31497 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12793 chr3R 27708679 27708864 + 20 NA intron (FBgn0011224, intron 5 of 14) protein_coding-intron (FBgn0011224, intron 4 of 13) 57205 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6957 chr3L 2879559 2879726 + 20 NA promoter-TSS (FBgn0263392) protein_coding-promoter-TSS (FBgn0263392) -484 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6575 chr2RHet 1957369 1957632 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7628 chr3L 10964214 10964335 + 20 NA Intergenic Intergenic -1474 FBgn0036112 FBgn0036112 FBtr0076194 CG14147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3281 chr2L 20712866 20713228 + 20 NA exon (FBgn0014859, exon 1 of 5) protein_coding-exon (FBgn0014859, exon 1 of 5) 1369 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12684 chr3R 27154246 27154422 + 20 NA intron (FBgn0085376, intron 1 of 7) protein_coding-intron (FBgn0085376, intron 1 of 16) 17438 FBgn0085376 FBgn0085376 FBtr0301051 CG34347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3272 chr2L 20689340 20689545 + 20 NA promoter-TSS (FBgn0014859) protein_coding-promoter-TSS (FBgn0014859) 7072 FBgn0032877 FBgn0032877 FBtr0081391 CG2617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12432 chr3R 25539578 25539632 + 20 NA promoter-TSS (FBgn0039684) protein_coding-promoter-TSS (FBgn0039684) -656 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2122 chr2L 14922755 14922870 + 20 NA intron (FBgn0259213, intron 10 of 19) protein_coding-intron (FBgn0259213, intron 10 of 19) -1923 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10954 chr3R 15483472 15484115 + 20 NA promoter-TSS (FBgn0038725) protein_coding-promoter-TSS (FBgn0038725) -205 FBgn0038725 FBgn0038725 FBtr0083802 CG6184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8292 chr3L 16741853 16741956 + 20 NA Intergenic Intergenic -6685 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_590 chr2L 4139635 4139838 + 20 NA Intergenic Intergenic -9543 FBgn0031585 FBgn0031585 FBtr0077468 CG2955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8792 chr3L 23847971 23848025 + 20 NA intron (FBgn0058470, intron 12 of 12) protein_coding-intron (FBgn0058470, intron 12 of 12) 28244 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9826 chr3R 7311998 7312146 + 20 NA Intergenic Intergenic -14720 FBgn0037908 FBgn0037908 FBtr0082395 dpr5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9145 chr3R 2080686 2080932 + 20 NA promoter-TSS (FBgn0037415) protein_coding-promoter-TSS (FBgn0037415) -188 FBgn0037415 FBgn0037415 FBtr0078598 Osi8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9272 chr3R 2825165 2825335 + 20 NA promoter-TSS (FBgn0260642) protein_coding-promoter-TSS (FBgn0260642) -52807 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11718 chr3R 22593200 22593278 + 20 NA Intergenic Intergenic 16691 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11102 chr3R 16304592 16304663 + 20 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 2 of 17) 5646 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6114 chr2R 19539941 19539995 + 20 NA intron (FBgn0004795, intron 9 of 11) protein_coding-intron (FBgn0004795, intron 9 of 11) -5126 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1790 chr2L 13338505 13338560 + 20 NA Intergenic Intergenic -7411 FBgn0264308 FBgn0264308 FBtr0331504 CG43778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4906 chr2R 9109830 9109921 + 20 NA promoter-TSS (FBgn0011763) protein_coding-promoter-TSS (FBgn0011763) -32 FBgn0043010 FBgn0043010 FBtr0087763 Fsn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1212 chr2L 8813633 8813959 + 20 NA Intergenic Intergenic 4396 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12082 chr3R 24188968 24189136 + 20 NA Intergenic Intergenic 11088 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12924 chr4 523761 523820 + 20 NA intron (FBgn0004607, intron 1 of 12) protein_coding-intron (FBgn0004607, intron 1 of 13) 1354 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2802 chr2L 17969462 17969628 + 20 NA intron (FBgn0032656, intron 2 of 2) protein_coding-intron (FBgn0032656, intron 2 of 3) 6131 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5114 chr2R 10830432 10830498 + 20 NA exon (FBgn0033985, exon 1 of 4) protein_coding-exon (FBgn0033985, exon 1 of 4) 349 FBgn0033985 FBgn0033985 FBtr0087408 CG10257 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10550 chr3R 12717995 12718125 + 20 NA promoter-TSS (FBgn0263595) ncRNA-promoter-TSS (FBgn0263595) -72 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11667 chr3R 22443895 22444048 + 20 NA promoter-TSS (FBgn0039434) protein_coding-promoter-TSS (FBgn0039434) -874 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7663 chr3L 11502149 11502243 + 20 NA promoter-TSS (FBgn0003377) protein_coding-promoter-TSS (FBgn0003377) 298 FBgn0003378 FBgn0003378 FBtr0076160 Sgs8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1459 chr2L 10698909 10699188 + 20 NA TTS (FBgn0023496) protein_coding-TTS (FBgn0023496) -1024 FBgn0032286 FBgn0032286 FBtr0304136 CG7300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12851 chr3RHet 819882 820065 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4231 chr2R 4002802 4002925 + 20 NA exon (FBgn0050372, exon 12 of 12) protein_coding-exon (FBgn0050372, exon 12 of 12) 7493 FBgn0050372 FBgn0050372 FBtr0100140 Asap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6709 chr3L 376435 376489 + 20 NA exon (FBgn0262139, exon 1 of 10) protein_coding-exon (FBgn0262139, exon 1 of 10) 854 FBgn0262139 FBgn0262139 FBtr0333902 trh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_954 chr2L 7065838 7065973 + 20 NA promoter-TSS (FBgn0031886) protein_coding-promoter-TSS (FBgn0031886) -68 FBgn0031886 FBgn0031886 FBtr0079424 Nuf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7365 chr3L 8064451 8064520 + 20 NA exon (FBgn0262579, exon 2 of 12) protein_coding-exon (FBgn0262579, exon 2 of 12) 433 FBgn0262579 FBgn0262579 FBtr0304994 Ect4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9484 chr3R 4419207 4419261 + 20 NA intron (FBgn0261929, intron 2 of 6) protein_coding-intron (FBgn0261929, intron 2 of 6) 15307 FBgn0261929 FBgn0261929 FBtr0330144 CG42796 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5651 chr2R 15759471 15759575 + 20 NA Intergenic Intergenic 7301 FBgn0043532 FBgn0043532 FBtr0086337 Obp56i protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2576 chr2L 17008634 17008799 + 20 NA Intergenic Intergenic 4338 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1009 chr2L 7745449 7745503 + 20 NA promoter-TSS (FBgn0031940) protein_coding-promoter-TSS (FBgn0031940) -635 FBgn0031940 FBgn0031940 FBtr0079499 CG7214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_247 chr2L 1409292 1409346 + 20 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 11130 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2506 chr2L 16693185 16693241 + 20 NA intron (FBgn0261278, intron 3 of 6) protein_coding-intron (FBgn0261278, intron 3 of 6) -2309 FBgn0261278 FBgn0261278 FBtr0100459 grp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8841 chr3L 24501149 24501301 + 20 NA Intergenic Intergenic -25964 FBgn0040045 FBgn0040045 FBtr0307117 CR12460 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6158 chr2R 20075055 20075139 + 20 NA promoter-TSS (FBgn0034987) protein_coding-promoter-TSS (FBgn0034987) 871 FBgn0034987 FBgn0034987 FBtr0072260 CG3363 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9811 chr3R 7188430 7188505 + 20 NA intron (FBgn0004595, intron 2 of 7) protein_coding-intron (FBgn0004595, intron 2 of 7) -9614 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10234 chr3R 10687529 10687664 + 20 NA Intergenic Intergenic -2036 FBgn0038267 FBgn0038267 FBtr0083012 CG17304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4666 chr2R 7354007 7354205 + 20 NA Intergenic Intergenic -9104 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3288 chr2L 20723823 20724026 + 20 NA TTS (FBgn0032878) protein_coding-TTS (FBgn0032878) 2627 FBgn0032878 FBgn0032878 FBtr0081396 CG9316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8392 chr3L 17468064 17468202 + 20 NA promoter-TSS (FBgn0036728) protein_coding-promoter-TSS (FBgn0036728) -16 FBgn0036728 FBgn0036728 FBtr0333691 CG7580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1933 chr2L 14319904 14320066 + 20 NA exon (FBgn0261563, exon 5 of 16) protein_coding-exon (FBgn0261563, exon 5 of 16) -8444 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6588 chr2RHet 2064494 2064668 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3910 chr2R 236019 236245 + 20 NA intron (FBgn0260798, intron 13 of 15) protein_coding-intron (FBgn0260798, intron 12 of 14) -105688 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13296 chrUextra 197483 198321 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3447 chr2L 21743879 21743935 + 20 NA exon (FBgn0086779, exon 3 of 9) protein_coding-exon (FBgn0086779, exon 3 of 9) 13559 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9908 chr3R 8065751 8065860 + 20 NA promoter-TSS (FBgn0038007) protein_coding-promoter-TSS (FBgn0038007) -974 FBgn0038007 FBgn0038007 FBtr0082617 Cyp313a3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4053 chr2R 2394722 2394945 + 20 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 2) 26267 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13236 chrU 3067333 3067387 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9782 chr3R 6947985 6948039 + 20 NA Intergenic Intergenic 6023 FBgn0040256 FBgn0040256 FBtr0113321 Ugt86Dd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7330 chr3L 7612114 7612326 + 20 NA intron (FBgn0035802, intron 5 of 16) protein_coding-intron (FBgn0035802, intron 3 of 14) -20597 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5385 chr2R 13279997 13280246 + 20 NA promoter-TSS (FBgn0050232) tRNA-promoter-TSS (FBgn0050232) 401 FBgn0011879 FBgn0011879 FBtr0086908 tRNA:H:56E tRNA Nup98-S2-pascual-garcia2017_R1_peak_11216 chr3R 17318354 17318492 + 20 NA Intergenic Intergenic -7554 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3838 chr2L 22894018 22894196 + 20 NA intron (FBgn0250907, intron 8 of 8) protein_coding-intron (FBgn0250907, intron 8 of 8) 19573 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11854 chr3R 23265464 23265518 + 20 NA promoter-TSS (FBgn0263401) protein_coding-promoter-TSS (FBgn0263401) -543 FBgn0263401 FBgn0263401 FBtr0309178 CG43447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12401 chr3R 25515996 25516252 + 20 NA Intergenic Intergenic -1091 FBgn0039682 FBgn0039682 FBtr0085463 Obp99c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7590 chr3L 10700356 10700618 + 20 NA Intergenic Intergenic -10510 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2208 chr2L 15243039 15243093 + 20 NA intron (FBgn0028516, intron 3 of 8) protein_coding-intron (FBgn0028516, intron 3 of 8) 2852 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3827 chr2L 22853397 22853488 + 20 NA Intergenic Intergenic -10234 FBgn0058005 FBgn0058005 FBtr0308291 CG40005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6298 chr2RHet 43859 43940 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5607 chr2R 15461139 15461193 + 20 NA intron (FBgn0003435, intron 5 of 10) protein_coding-intron (FBgn0003435, intron 5 of 9) -7494 FBgn0003435 FBgn0003435 FBtr0301610 sm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10337 chr3R 11463662 11463765 + 20 NA exon (FBgn0263041, exon 4 of 4) protein_coding-exon (FBgn0263041, exon 4 of 4) 823 FBgn0263041 FBgn0263041 FBtr0306930 CG43336 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10814 chr3R 14445837 14445891 + 20 NA intron (FBgn0038629, intron 2 of 7) protein_coding-intron (FBgn0038629, intron 2 of 8) 1173 FBgn0038629 FBgn0038629 FBtr0114497 CG14304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5658 chr2R 15822855 15822913 + 20 NA Intergenic Intergenic 5165 FBgn0263340 FBgn0263340 FBtr0308772 CR43421 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1684 chr2L 12666668 12666880 + 20 NA TTS (FBgn0032442) protein_coding-TTS (FBgn0032442) 2940 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_432 chr2L 2720681 2720843 + 20 NA Intergenic Intergenic -10076 FBgn0031449 FBgn0031449 FBtr0077708 CG31689 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2326 chr2L 15652736 15652818 + 20 NA exon (FBgn0028863, exon 2 of 13) protein_coding-exon (FBgn0028863, exon 2 of 13) -8264 FBgn0028864 FBgn0028864 FBtr0080756 CG18477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1110 chr2L 8588026 8588085 + 20 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 6434 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6162 chr2R 20104142 20104196 + 20 NA intron (FBgn0050419, intron 1 of 1) protein_coding-intron (FBgn0050419, intron 1 of 1) -9723 FBgn0034990 FBgn0034990 FBtr0072276 CG11406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8437 chr3L 17740777 17740984 + 20 NA promoter-TSS (FBgn0036750) protein_coding-promoter-TSS (FBgn0036750) -920 FBgn0036750 FBgn0036750 FBtr0075194 CG6034 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2747 chr2L 17787475 17787600 + 20 NA exon (FBgn0262018, exon 14 of 14) protein_coding-exon (FBgn0262018, exon 14 of 14) -4875 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6453 chr2RHet 1299704 1299781 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11073 chr3R 16169502 16169761 + 20 NA TTS (FBgn0038789) protein_coding-TTS (FBgn0038789) 4642 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10789 chr3R 14333994 14334057 + 20 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 37283 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1995 chr2L 14458782 14458836 + 20 NA Intergenic Intergenic -7887 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13560 chrX 5794735 5794981 + 20 NA promoter-TSS (FBgn0000042) protein_coding-promoter-TSS (FBgn0000042) -36 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2799 chr2L 17955251 17955346 + 20 NA Intergenic Intergenic -8116 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3315 chr2L 20936066 20936308 + 20 NA Intergenic Intergenic -2074 FBgn0032908 FBgn0032908 FBtr0306031 CG9270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9445 chr3R 4121993 4122173 + 20 NA intron (FBgn0037565, intron 12 of 13) protein_coding-intron (FBgn0037565, intron 11 of 12) 4026 FBgn0051463 FBgn0051463 FBtr0081831 CG31463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6593 chr2RHet 2072932 2072986 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2305 chr2L 15598213 15598385 + 20 NA Intergenic Intergenic 13670 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13217 chrU 2420142 2420258 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7226 chr3L 6783100 6783344 + 20 NA promoter-TSS (FBgn0086680) protein_coding-promoter-TSS (FBgn0086680) -36 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6004 chr2R 18669258 18669312 + 20 NA intron (FBgn0259145, intron 1 of 11) protein_coding-intron (FBgn0259145, intron 1 of 11) -2524 FBgn0061435 FBgn0061435 FBtr0300125 CG30270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10505 chr3R 12456777 12456909 + 20 NA intron (FBgn0262742, intron 3 of 13) protein_coding-intron (FBgn0262742, intron 2 of 12) 5883 FBgn0262742 FBgn0262742 FBtr0083333 Fas1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9433 chr3R 4000348 4000443 + 20 NA intron (FBgn0001138, intron 2 of 8) protein_coding-intron (FBgn0001138, intron 2 of 8) 6769 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3488 chr2L 21847678 21847737 + 20 NA Intergenic Intergenic 19114 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9227 chr3R 2594143 2594198 + 20 NA intron (FBgn0261638, intron 1 of 2) ncRNA-intron (FBgn0261638, intron 1 of 2) 1398 FBgn0261638 FBgn0261638 FBtr0309069 CR42721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5904 chr2R 17757953 17758203 + 20 NA Intergenic Intergenic -3714 FBgn0034667 FBgn0034667 FBtr0071735 comr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_902 chr2L 6601138 6601228 + 20 NA promoter-TSS (FBgn0031835) protein_coding-promoter-TSS (FBgn0031835) -117 FBgn0031835 FBgn0031835 FBtr0089641 CG11319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4424 chr2R 5359371 5359425 + 20 NA exon (FBgn0259234, exon 10 of 19) protein_coding-exon (FBgn0259234, exon 10 of 19) -16945 FBgn0053757 FBgn0053757 FBtr0091758 CG33757 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2713 chr2L 17616939 17617175 + 20 NA Intergenic Intergenic 9289 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5838 chr2R 17336448 17336641 + 20 NA intron (FBgn0010415, intron 2 of 6) protein_coding-intron (FBgn0010415, intron 2 of 5) -31975 FBgn0010415 FBgn0010415 FBtr0301557 Sdc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3555 chr2L 21991493 21991551 + 20 NA exon (FBgn0032969, exon 1 of 2) protein_coding-exon (FBgn0032969, exon 1 of 2) 1411 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12663 chr3R 27039065 27039161 + 20 NA promoter-TSS (FBgn0039828) protein_coding-promoter-TSS (FBgn0039828) -41 FBgn0061476 FBgn0061476 FBtr0085777 zwilch protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5020 chr2R 10000764 10000828 + 20 NA intron (FBgn0040752, intron 2 of 11) protein_coding-intron (FBgn0040752, intron 2 of 11) 22260 FBgn0259184 FBgn0259184 FBtr0307217 CG42288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13569 chrX 6004091 6004145 + 20 NA intron (FBgn0264386, intron 24 of 25) protein_coding-intron (FBgn0264386, intron 24 of 25) 16216 FBgn0029843 FBgn0029843 FBtr0070873 Nep1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13453 chrX 1435022 1435076 + 20 NA intron (FBgn0025390, intron 7 of 7) protein_coding-intron (FBgn0025390, intron 7 of 7) 17384 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6679 chr2RHet 2914805 2914872 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_222 chr2L 1363223 1363305 + 20 NA Intergenic Intergenic -1532 FBgn0053126 FBgn0053126 FBtr0329947 NLaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8532 chr3L 18850336 18850391 + 20 NA Intergenic Intergenic -3719 FBgn0262461 FBgn0262461 FBtr0304507 mir-315 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1777 chr2L 13248887 13248941 + 20 NA intron (FBgn0032495, intron 1 of 3) protein_coding-intron (FBgn0032495, intron 1 of 3) -2595 FBgn0051728 FBgn0051728 FBtr0305556 CG31728 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13011 chr4 1022741 1022795 + 20 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 12417 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6113 chr2R 19539707 19539764 + 20 NA intron (FBgn0004795, intron 9 of 11) protein_coding-intron (FBgn0004795, intron 9 of 11) -5359 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9896 chr3R 7992451 7992660 + 20 NA promoter-TSS (FBgn0261714) protein_coding-promoter-TSS (FBgn0261714) -647 FBgn0261714 FBgn0261714 FBtr0082548 Cpn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10567 chr3R 12777169 12777403 + 20 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -19951 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7550 chr3L 10318290 10318558 + 20 NA Intergenic Intergenic 5478 FBgn0262381 FBgn0262381 FBtr0304227 mir-276b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2097 chr2L 14826339 14826423 + 20 NA Intergenic Intergenic 15593 FBgn0053309 FBgn0053309 FBtr0080674 CG33309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3974 chr2R 871020 871141 + 20 NA intron (FBgn0040849, intron 2 of 4) protein_coding-intron (FBgn0040849, intron 2 of 4) 33908 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3795 chr2L 22653643 22653810 + 20 NA Intergenic Intergenic -4645 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1551 chr2L 11537298 11537567 + 20 NA TTS (FBgn0263386) protein_coding-TTS (FBgn0263386) 1287 FBgn0263386 FBgn0263386 FBtr0309073 CG43438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9010 chr3R 859364 859418 + 20 NA Intergenic Intergenic 12279 FBgn0263626 FBgn0263626 FBtr0309991 CR43635 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6591 chr2RHet 2070660 2070867 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1810 chr2L 13476056 13476468 + 20 NA exon (FBgn0263354, exon 4 of 9) protein_coding-exon (FBgn0263354, exon 4 of 9) 14488 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3107 chr2L 19841129 19841183 + 20 NA intron (FBgn0263873, intron 1 of 14) protein_coding-intron (FBgn0263873, intron 2 of 15) -14945 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8125 chr3L 15207599 15207706 + 20 NA Intergenic Intergenic 6708 FBgn0036490 FBgn0036490 FBtr0075644 CG6888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1687 chr2L 12680647 12680832 + 20 NA intron (FBgn0004394, intron 1 of 2) protein_coding-intron (FBgn0004394, intron 3 of 4) 2133 FBgn0004394 FBgn0004394 FBtr0080393 pdm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11095 chr3R 16266184 16266284 + 20 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 1 of 19) 32247 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1576 chr2L 11790666 11790810 + 20 NA TTS (FBgn0032376) protein_coding-TTS (FBgn0032376) 1134 FBgn0032375 FBgn0032375 FBtr0300384 CG14932 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6328 chr2RHet 238269 238520 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_232 chr2L 1387701 1387755 + 20 NA intron (FBgn0002543, intron 9 of 13) protein_coding-intron (FBgn0002543, intron 9 of 13) 19639 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7544 chr3L 10137398 10137452 + 20 NA Intergenic Intergenic 7401 FBgn0086076 FBgn0086076 FBtr0114352 snoRNA:MeU2-A31 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_10561 chr3R 12757240 12757294 + 20 NA promoter-TSS (FBgn0000015) protein_coding-promoter-TSS (FBgn0000015) 68 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_834 chr2L 5925060 5925253 + 20 NA promoter-TSS (FBgn0015381) protein_coding-promoter-TSS (FBgn0015381) -781 FBgn0015381 FBgn0015381 FBtr0079145 dsf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7850 chr3L 12984207 12984261 + 20 NA Intergenic Intergenic -4001 FBgn0036329 FBgn0036329 FBtr0075872 CG11262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6959 chr3L 2888467 2888521 + 20 NA intron (FBgn0035379, intron 3 of 5) protein_coding-intron (FBgn0035379, intron 3 of 5) 3672 FBgn0035379 FBgn0035379 FBtr0073011 spz5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10090 chr3R 9422643 9422801 + 20 NA Intergenic Intergenic -4386 FBgn0038159 FBgn0038159 FBtr0082789 CG14369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8727 chr3L 23346450 23346504 + 20 NA Intergenic Intergenic 14051 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2056 chr2L 14665488 14665724 + 20 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 23719 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7294 chr3L 7263928 7264121 + 20 NA exon (FBgn0035756, exon 11 of 13) protein_coding-exon (FBgn0035756, exon 11 of 13) -7004 FBgn0035755 FBgn0035755 FBtr0309299 CG14830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12822 chr3RHet 68000 68079 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13142 chrU 1063933 1063991 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8956 chr3R 418511 418715 + 20 NA Intergenic Intergenic -14247 FBgn0052945 FBgn0052945 FBtr0078896 CG32945 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10977 chr3R 15622588 15622642 + 20 NA exon (FBgn0014135, exon 4 of 5) protein_coding-exon (FBgn0014135, exon 4 of 5) -5797 FBgn0051471 FBgn0051471 FBtr0083794 tRNA:CR31471 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1470 chr2L 10801063 10801312 + 20 NA promoter-TSS (FBgn0051869) protein_coding-promoter-TSS (FBgn0051869) -341 FBgn0051869 FBgn0051869 FBtr0290246 CG31869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12280 chr3R 25017987 25018048 + 20 NA intron (FBgn0039647, intron 1 of 7) protein_coding-intron (FBgn0039647, intron 1 of 6) 2698 FBgn0039647 FBgn0039647 FBtr0113304 CG14509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_705 chr2L 4887675 4887921 + 20 NA Intergenic Intergenic -2197 FBgn0031644 FBgn0031644 FBtr0077390 CG15625 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1112 chr2L 8589866 8589920 + 20 NA TTS (FBgn0264437) ncRNA-TTS (FBgn0264437) 4596 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4342 chr2R 4770175 4770297 + 20 NA exon (FBgn0011286, exon 22 of 28) protein_coding-exon (FBgn0011286, exon 22 of 28) 8705 FBgn0033337 FBgn0033337 FBtr0330246 CG8272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12710 chr3R 27272467 27272521 + 20 NA intron (FBgn0261988, intron 3 of 12) protein_coding-intron (FBgn0261988, intron 3 of 12) 13097 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8041 chr3L 14362235 14362292 + 20 NA TTS (FBgn0001085) protein_coding-TTS (FBgn0001085) 544 FBgn0036421 FBgn0036421 FBtr0113170 CG13481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3357 chr2L 21230624 21230680 + 20 NA exon (FBgn0026577, exon 8 of 8) protein_coding-exon (FBgn0026577, exon 8 of 8) 3074 FBgn0051626 FBgn0051626 FBtr0081486 CG31626 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2852 chr2L 18158659 18158725 + 20 NA promoter-TSS (FBgn0032671) protein_coding-promoter-TSS (FBgn0032671) -6 FBgn0032671 FBgn0032671 FBtr0081062 CG7200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10007 chr3R 8772559 8772802 + 20 NA Intergenic Intergenic -14794 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12554 chr3R 26665119 26665275 + 20 NA exon (FBgn0039804, exon 3 of 4) protein_coding-exon (FBgn0039804, exon 3 of 4) 11625 FBgn0039804 FBgn0039804 FBtr0085708 CG15544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9473 chr3R 4332554 4332620 + 20 NA Intergenic Intergenic 4493 FBgn0037590 FBgn0037590 FBtr0081900 Or85b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5322 chr2R 12593106 12593426 + 20 NA exon (FBgn0050463, exon 3 of 12) protein_coding-exon (FBgn0050463, exon 3 of 12) 14063 FBgn0013763 FBgn0013763 FBtr0087111 CG5210 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11478 chr3R 21657371 21657544 + 20 NA promoter-TSS (FBgn0011669) protein_coding-promoter-TSS (FBgn0011669) 164 FBgn0011668 FBgn0011668 FBtr0084914 Mst57Da protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6015 chr2R 18764842 18764896 + 20 NA exon (FBgn0034789, exon 9 of 14) protein_coding-exon (FBgn0034789, exon 9 of 14) 2575 FBgn0034789 FBgn0034789 FBtr0304923 PIP5K59B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7325 chr3L 7559917 7559971 + 20 NA exon (FBgn0035798, exon 5 of 9) protein_coding-exon (FBgn0035798, exon 5 of 9) 4234 FBgn0035798 FBgn0035798 FBtr0331840 frac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5027 chr2R 10096075 10096132 + 20 NA intron (FBgn0005613, intron 1 of 2) protein_coding-intron (FBgn0005613, intron 1 of 2) 3811 FBgn0005613 FBgn0005613 FBtr0087576 Sox15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9459 chr3R 4228034 4228277 + 20 NA intron (FBgn0263416, intron 3 of 15) protein_coding-intron (FBgn0263416, intron 3 of 15) -14231 FBgn0051462 FBgn0051462 FBtr0081851 CG31462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1131 chr2L 8624506 8624594 + 20 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 4522 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10742 chr3R 14000278 14000387 + 20 NA exon (FBgn0042693, exon 3 of 8) protein_coding-exon (FBgn0042693, exon 3 of 8) 6169 FBgn0042693 FBgn0042693 FBtr0083555 PP2A-B' protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5492 chr2R 14350108 14350162 + 20 NA exon (FBgn0028496, exon 15 of 19) protein_coding-exon (FBgn0028496, exon 15 of 19) -8168 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2009 chr2L 14527494 14527556 + 20 NA Intergenic Intergenic 2599 FBgn0053648 FBgn0053648 FBtr0091625 CG33648 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13757 chrX 15680068 15680125 + 20 NA promoter-TSS (FBgn0030692) protein_coding-promoter-TSS (FBgn0030692) 10 FBgn0030692 FBgn0030692 FBtr0074094 mRpS30 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8301 chr3L 16815296 16815514 + 20 NA intron (FBgn0036665, intron 1 of 3) protein_coding-intron (FBgn0036665, intron 1 of 3) 6769 FBgn0036665 FBgn0036665 FBtr0273320 CG13024 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13279 chrU 7933745 7934046 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2251 chr2L 15432965 15433108 + 20 NA promoter-TSS (FBgn0028892) protein_coding-promoter-TSS (FBgn0028892) -326 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3338 chr2L 21078056 21078319 + 20 NA intron (FBgn0032911, intron 4 of 8) protein_coding-intron (FBgn0032911, intron 4 of 8) 2782 FBgn0032911 FBgn0032911 FBtr0329988 tadr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_501 chr2L 3403389 3403443 + 20 NA Intergenic Intergenic 5393 FBgn0085204 FBgn0085204 FBtr0112366 CG34175 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8019 chr3L 14164079 14164166 + 20 NA Intergenic Intergenic 7598 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7453 chr3L 8890406 8890648 + 20 NA intron (FBgn0035934, intron 10 of 15) protein_coding-intron (FBgn0035934, intron 10 of 16) 5831 FBgn0020633 FBgn0020633 FBtr0076585 Mcm7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6073 chr2R 19231462 19231550 + 20 NA exon (FBgn0046253, exon 5 of 6) protein_coding-exon (FBgn0046253, exon 5 of 6) -2652 FBgn0034846 FBgn0034846 FBtr0290285 CG9863 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10844 chr3R 14697241 14697433 + 20 NA Intergenic Intergenic -4093 FBgn0038654 FBgn0038654 FBtr0083695 CG14298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3632 chr2L 22158572 22158749 + 20 NA exon (FBgn0261802, exon 8 of 8) protein_coding-exon (FBgn0261802, exon 8 of 8) 6906 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10733 chr3R 13915028 13915247 + 20 NA Intergenic Intergenic -1388 FBgn0003499 FBgn0003499 FBtr0301615 sr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8463 chr3L 18022763 18022820 + 20 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -10626 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3670 chr2L 22261707 22261948 + 20 NA Intergenic Intergenic 11949 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13271 chrU 6555963 6556060 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8730 chr3L 23420386 23420575 + 20 NA Intergenic Intergenic 88054 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10775 chr3R 14241752 14241808 + 20 NA exon (FBgn0004652, exon 8 of 8) protein_coding-exon (FBgn0004652, exon 8 of 8) -4427 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_449 chr2L 2857086 2857210 + 20 NA promoter-TSS (FBgn0031474) protein_coding-promoter-TSS (FBgn0031474) 1078 FBgn0015521 FBgn0015521 FBtr0273293 RpS21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1625 chr2L 12277774 12277996 + 20 NA intron (FBgn0000114, intron 2 of 8) protein_coding-intron (FBgn0000114, intron 3 of 11) -60963 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_686 chr2L 4724041 4724095 + 20 NA Intergenic Intergenic 10390 FBgn0031626 FBgn0031626 FBtr0077419 CG15631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12921 chr4 190607 190683 + 20 NA exon (FBgn0053978, exon 4 of 4) protein_coding-exon (FBgn0053978, exon 4 of 4) 5121 FBgn0053978 FBgn0053978 FBtr0310436 CG33978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6318 chr2RHet 137086 137335 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13645 chrX 10562202 10562276 + 20 NA intron (FBgn0052677, intron 2 of 12) protein_coding-intron (FBgn0052677, intron 2 of 14) 5260 FBgn0030224 FBgn0030224 FBtr0071504 CG12637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8659 chr3L 21751514 21751585 + 20 NA TTS (FBgn0037131) protein_coding-TTS (FBgn0037131) 1292 FBgn0037131 FBgn0037131 FBtr0078435 CG14564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13211 chrU 2349780 2349834 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12406 chr3R 25519774 25520099 + 20 NA intron (FBgn0039683, intron 3 of 3) protein_coding-intron (FBgn0039683, intron 3 of 3) 1623 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5483 chr2R 14186231 14186285 + 20 NA promoter-TSS (FBgn0034326) protein_coding-promoter-TSS (FBgn0034326) -564 FBgn0034326 FBgn0034326 FBtr0307185 CG18540 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12048 chr3R 24054361 24054750 + 20 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 34789 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7991 chr3L 13975816 13975894 + 20 NA exon (FBgn0036391, exon 6 of 6) protein_coding-exon (FBgn0036391, exon 6 of 6) -3865 FBgn0036393 FBgn0036393 FBtr0333024 CG17362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6795 chr3L 1123097 1123151 + 20 NA Intergenic Intergenic -22035 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12259 chr3R 24908994 24909064 + 20 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 19479 FBgn0039633 FBgn0039633 FBtr0330300 CG11873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7491 chr3L 9278428 9278617 + 20 NA exon (FBgn0264000, exon 17 of 17) protein_coding-exon (FBgn0264000, exon 17 of 17) 33444 FBgn0264000 FBgn0264000 FBtr0330341 Glu-RIB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12868 chr3RHet 1541682 1541760 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13804 chrX 18218180 18218249 + 20 NA TTS (FBgn0030913) protein_coding-TTS (FBgn0030913) -8032 FBgn0030912 FBgn0030912 FBtr0074580 CG6023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2320 chr2L 15639246 15639300 + 20 NA Intergenic Intergenic 9189 FBgn0028518 FBgn0028518 FBtr0080755 CG18480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12946 chr4 603389 603484 + 20 NA promoter-TSS (FBgn0039911) protein_coding-promoter-TSS (FBgn0039911) -335 FBgn0039911 FBgn0039911 FBtr0089080 CG1909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1404 chr2L 10003763 10003844 + 20 NA promoter-TSS (FBgn0043456) protein_coding-promoter-TSS (FBgn0043456) -22 FBgn0043456 FBgn0043456 FBtr0303902 CG4747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12091 chr3R 24226061 24226115 + 20 NA Intergenic Intergenic -17842 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11579 chr3R 22096500 22096685 + 20 NA intron (FBgn0039420, intron 7 of 7) protein_coding-intron (FBgn0039420, intron 7 of 7) 8208 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3067 chr2L 19683423 19683492 + 20 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 17511 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_654 chr2L 4498047 4498168 + 20 NA exon (FBgn0053196, exon 67 of 82) protein_coding-exon (FBgn0053196, exon 67 of 82) -21083 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11914 chr3R 23508647 23508701 + 20 NA promoter-TSS (FBgn0003330) protein_coding-promoter-TSS (FBgn0003330) -923 FBgn0003330 FBgn0003330 FBtr0085245 Sce protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4619 chr2R 6923215 6923275 + 20 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -49846 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5528 chr2R 14653668 14653740 + 20 NA promoter-TSS (FBgn0034389) protein_coding-promoter-TSS (FBgn0034389) -877 FBgn0034389 FBgn0034389 FBtr0110971 Mctp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1539 chr2L 11437826 11437958 + 20 NA exon (FBgn0261648, exon 2 of 4) protein_coding-exon (FBgn0261648, exon 2 of 4) 7711 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10488 chr3R 12382628 12382696 + 20 NA intron (FBgn0259244, intron 9 of 12) protein_coding-intron (FBgn0259244, intron 9 of 16) -14575 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11778 chr3R 23000305 23000359 + 20 NA exon (FBgn0004197, exon 13 of 15) protein_coding-exon (FBgn0004197, exon 13 of 15) 8892 FBgn0003482 FBgn0003482 FBtr0085116 spn-D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_867 chr2L 6284634 6284688 + 20 NA intron (FBgn0053531, intron 3 of 7) protein_coding-intron (FBgn0053531, intron 3 of 17) 13637 FBgn0261699 FBgn0261699 FBtr0333241 CR42735 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13173 chrU 1569839 1569957 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5407 chr2R 13579461 13579515 + 20 NA exon (FBgn0034262, exon 3 of 5) protein_coding-exon (FBgn0034262, exon 3 of 5) 3368 FBgn0034262 FBgn0034262 FBtr0086889 swi2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9356 chr3R 3404717 3404932 + 20 NA exon (FBgn0083963, exon 7 of 13) protein_coding-exon (FBgn0083963, exon 7 of 13) -29980 FBgn0015568 FBgn0015568 FBtr0081544 alpha-Est1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12741 chr3R 27450212 27450418 + 20 NA intron (FBgn0039862, intron 1 of 3) protein_coding-intron (FBgn0039862, intron 1 of 3) 2457 FBgn0039862 FBgn0039862 FBtr0330107 kek6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12205 chr3R 24607145 24607454 + 20 NA Intergenic Intergenic -8040 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11659 chr3R 22423459 22423513 + 20 NA exon (FBgn0263289, exon 24 of 26) protein_coding-exon (FBgn0263289, exon 24 of 26) -21359 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12424 chr3R 25532213 25532643 + 20 NA Intergenic Intergenic -7833 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1466 chr2L 10774750 10774804 + 20 NA exon (FBgn0051869, exon 6 of 7) protein_coding-exon (FBgn0051869, exon 6 of 7) 3909 FBgn0032299 FBgn0032299 FBtr0080136 CG17127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4009 chr2R 1630135 1630222 + 20 NA Intergenic Intergenic -11855 FBgn0022288 FBgn0022288 FBtr0086043 l(2)09851 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4699 chr2R 7506537 7506611 + 20 NA promoter-TSS (FBgn0086712) protein_coding-promoter-TSS (FBgn0086712) -46 FBgn0086712 FBgn0086712 FBtr0088090 Egm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6972 chr3L 3030778 3030832 + 20 NA Intergenic Intergenic -4373 FBgn0004372 FBgn0004372 FBtr0332086 aly protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12535 chr3R 26439582 26439657 + 20 NA Intergenic Intergenic 7708 FBgn0051016 FBgn0051016 FBtr0300962 CG31016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_963 chr2L 7134912 7134966 + 20 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -1412 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12536 chr3R 26459812 26459866 + 20 NA Intergenic Intergenic -5089 FBgn0039792 FBgn0039792 FBtr0085672 CG2267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12042 chr3R 24040102 24040157 + 20 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 49215 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8275 chr3L 16526806 16526900 + 20 NA intron (FBgn0263131, intron 2 of 28) protein_coding-intron (FBgn0263131, intron 2 of 30) 9465 FBgn0263131 FBgn0263131 FBtr0307368 CG43373 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3939 chr2R 791457 791513 + 20 NA Intergenic Intergenic -45687 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8056 chr3L 14476871 14476925 + 20 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) -34027 FBgn0036426 FBgn0036426 FBtr0290282 CG9592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10803 chr3R 14371358 14371641 + 20 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) -191 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7564 chr3L 10588501 10588571 + 20 NA Intergenic Intergenic 28140 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1271 chr2L 8908828 8909041 + 20 NA intron (FBgn0085427, intron 1 of 11) protein_coding-intron (FBgn0085427, intron 1 of 10) 10130 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2859 chr2L 18203670 18203748 + 20 NA exon (FBgn0261804, exon 7 of 15) protein_coding-exon (FBgn0261804, exon 7 of 15) 3373 FBgn0263332 FBgn0263332 FBtr0308755 CR43413 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9174 chr3R 2295688 2295743 + 20 NA exon (FBgn0037447, exon 1 of 1) protein_coding-exon (FBgn0037447, exon 1 of 1) 1581 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4795 chr2R 8102377 8102474 + 20 NA TTS (FBgn0033701) protein_coding-TTS (FBgn0033701) 916 FBgn0033701 FBgn0033701 FBtr0087995 CG13171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10268 chr3R 10998397 10998477 + 20 NA TTS (FBgn0038294) protein_coding-TTS (FBgn0038294) 7555 FBgn0038294 FBgn0038294 FBtr0306642 Mf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8143 chr3L 15413841 15414084 + 20 NA Intergenic Intergenic 13030 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3579 chr2L 22028820 22028995 + 20 NA Intergenic Intergenic 8872 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3715 chr2L 22391704 22391886 + 20 NA Intergenic Intergenic 36530 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8133 chr3L 15334228 15334304 + 20 NA exon (FBgn0036494, exon 1 of 1) protein_coding-exon (FBgn0036494, exon 1 of 1) 4474 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3666 chr2L 22227258 22227522 + 20 NA TTS (FBgn0042701) pseudogene-TTS (FBgn0042701) 1239 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2261 chr2L 15474299 15474428 + 20 NA Intergenic Intergenic 3906 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6146 chr2R 19847131 19847289 + 20 NA exon (FBgn0029105, exon 3 of 6) protein_coding-exon (FBgn0029105, exon 3 of 6) 1845 FBgn0029105 FBgn0029105 FBtr0330254 alpha-catenin-related protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7622 chr3L 10921749 10921876 + 20 NA Intergenic Intergenic -15744 FBgn0054050 FBgn0054050 FBtr0100105 CG34050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7116 chr3L 5853529 5853583 + 20 NA Intergenic Intergenic -11045 FBgn0035641 FBgn0035641 FBtr0077025 CG5568 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6605 chr2RHet 2141963 2142369 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12360 chr3R 25393020 25393300 + 20 NA Intergenic Intergenic 11051 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_128 chr2L 959735 960049 + 20 NA Intergenic Intergenic 37099 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10399 chr3R 11898392 11898446 + 20 NA promoter-TSS (FBgn0026059) protein_coding-promoter-TSS (FBgn0026059) 3467 FBgn0026059 FBgn0026059 FBtr0303845 Mhcl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1397 chr2L 9888048 9888114 + 20 NA promoter-TSS (FBgn0029174) protein_coding-promoter-TSS (FBgn0029174) -17 FBgn0029174 FBgn0029174 FBtr0079872 FKBP59 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13136 chrU 1042666 1042740 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12051 chr3R 24057985 24058174 + 20 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 31265 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10163 chr3R 9934305 9934383 + 20 NA promoter-TSS (FBgn0038203) protein_coding-promoter-TSS (FBgn0038203) -301 FBgn0038202 FBgn0038202 FBtr0330081 CG12402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_731 chr2L 5215902 5216194 + 20 NA exon (FBgn0250847, exon 3 of 5) protein_coding-exon (FBgn0250847, exon 3 of 5) 485 FBgn0250847 FBgn0250847 FBtr0110802 CG14034 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13638 chrX 9949104 9949158 + 20 NA TTS (FBgn0030174) protein_coding-TTS (FBgn0030174) 1246 FBgn0004045 FBgn0004045 FBtr0071419 Yp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3559 chr2L 21999429 21999626 + 20 NA Intergenic Intergenic -6594 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2562 chr2L 16971948 16972244 + 20 NA promoter-TSS (FBgn0053179) protein_coding-promoter-TSS (FBgn0053179) -995 FBgn0053179 FBgn0053179 FBtr0329973 beat-IIIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13295 chrUextra 196862 197022 + 20 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6998 chr3L 3506346 3506444 + 20 NA exon (FBgn0259224, exon 5 of 6) protein_coding-exon (FBgn0259224, exon 5 of 6) 6286 FBgn0001254 FBgn0001254 FBtr0073141 ImpE2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10631 chr3R 13317878 13318089 + 19 NA intron (FBgn0261046, intron 6 of 34) protein_coding-intron (FBgn0261046, intron 7 of 34) 13406 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6284 chr2R 21070507 21070745 + 19 NA TTS (FBgn0035094) protein_coding-TTS (FBgn0035094) 5705 FBgn0035094 FBgn0035094 FBtr0333170 CG9380 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_745 chr2L 5385817 5385935 + 19 NA Intergenic Intergenic -4802 FBgn0262097 FBgn0262097 FBtr0310549 CG42850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_48 chr2L 671185 671337 + 19 NA intron (FBgn0000497, intron 2 of 11) protein_coding-intron (FBgn0000497, intron 2 of 11) 43707 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1680 chr2L 12660417 12660623 + 19 NA exon (FBgn0004394, exon 2 of 5) protein_coding-exon (FBgn0004394, exon 2 of 5) 9194 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_755 chr2L 5414828 5414910 + 19 NA intron (FBgn0016660, intron 5 of 5) protein_coding-intron (FBgn0016660, intron 5 of 5) 10527 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12466 chr3R 25728037 25728292 + 19 NA TTS (FBgn0039718) protein_coding-TTS (FBgn0039718) 1359 FBgn0039718 FBgn0039718 FBtr0085515 CG15517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1853 chr2L 13933711 13933810 + 19 NA exon (FBgn0032538, exon 2 of 2) protein_coding-exon (FBgn0032538, exon 2 of 2) 930 FBgn0032538 FBgn0032538 FBtr0080558 CG16885 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5769 chr2R 16745460 16745694 + 19 NA Intergenic Intergenic -5951 FBgn0034553 FBgn0034553 FBtr0071560 CG9993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11608 chr3R 22179050 22179137 + 19 NA intron (FBgn0053970, intron 5 of 8) protein_coding-intron (FBgn0053970, intron 5 of 8) -2117 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9816 chr3R 7216065 7216166 + 19 NA intron (FBgn0004595, intron 6 of 7) protein_coding-intron (FBgn0004595, intron 6 of 7) -17504 FBgn0037892 FBgn0037892 FBtr0082384 mRpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4320 chr2R 4684841 4684895 + 19 NA Intergenic Intergenic -1154 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2126 chr2L 14930404 14930513 + 19 NA exon (FBgn0028887, exon 3 of 3) protein_coding-exon (FBgn0028887, exon 3 of 3) 5723 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5375 chr2R 13232413 13232476 + 19 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -37637 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1817 chr2L 13541245 13541333 + 19 NA promoter-TSS (FBgn0028941) protein_coding-promoter-TSS (FBgn0028941) 538 FBgn0028942 FBgn0028942 FBtr0080507 CG16852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7124 chr3L 5933878 5933932 + 19 NA intron (FBgn0053993, intron 1 of 5) protein_coding-intron (FBgn0053993, intron 1 of 5) -5502 FBgn0053993 FBgn0053993 FBtr0301034 CG33993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6913 chr3L 2248826 2248880 + 19 NA TTS (FBgn0052301) protein_coding-TTS (FBgn0052301) 218 FBgn0052305 FBgn0052305 FBtr0301322 CG32305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4386 chr2R 4964023 4964229 + 19 NA exon (FBgn0011746, exon 5 of 5) protein_coding-exon (FBgn0011746, exon 5 of 5) -2106 FBgn0025709 FBgn0025709 FBtr0088562 CG8083 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3658 chr2L 22218219 22218453 + 19 NA Intergenic Intergenic -4071 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10799 chr3R 14352713 14353000 + 19 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 18452 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5478 chr2R 14143541 14143786 + 19 NA Intergenic Intergenic 21035 FBgn0003022 FBgn0003022 FBtr0086768 Ote protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2570 chr2L 16992730 16992979 + 19 NA exon (FBgn0053179, exon 7 of 7) protein_coding-exon (FBgn0053179, exon 7 of 7) 7876 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9090 chr3R 1629957 1630240 + 19 NA intron (FBgn0263353, intron 1 of 3) protein_coding-intron (FBgn0263353, intron 1 of 3) 2048 FBgn0263353 FBgn0263353 FBtr0113195 CG11000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11357 chr3R 19093846 19093958 + 19 NA promoter-TSS (FBgn0004882) protein_coding-promoter-TSS (FBgn0004882) 2130 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9270 chr3R 2817791 2817867 + 19 NA intron (FBgn0260642, intron 1 of 6) protein_coding-intron (FBgn0260642, intron 1 of 6) -59267 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12100 chr3R 24263778 24263832 + 19 NA intron (FBgn0039584, intron 1 of 6) protein_coding-intron (FBgn0039584, intron 1 of 6) 19875 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12891 chr3RHet 2095991 2096106 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11467 chr3R 21452917 21453102 + 19 NA promoter-TSS (FBgn0039349) protein_coding-promoter-TSS (FBgn0039349) -366 FBgn0039349 FBgn0039349 FBtr0300728 Ssadh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11810 chr3R 23154234 23154288 + 19 NA Intergenic Intergenic 2343 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7560 chr3L 10574967 10575021 + 19 NA exon (FBgn0052062, exon 11 of 17) protein_coding-exon (FBgn0052062, exon 11 of 17) -22812 FBgn0036085 FBgn0036085 FBtr0076291 CG6527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2215 chr2L 15286934 15287193 + 19 NA Intergenic Intergenic 2051 FBgn0028853 FBgn0028853 FBtr0080729 CG15263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13072 chrU 131104 131413 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8966 chr3R 546041 546114 + 19 NA exon (FBgn0027570, exon 8 of 9) protein_coding-exon (FBgn0027570, exon 8 of 9) -6159 FBgn0037270 FBgn0037270 FBtr0078892 CG9769 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2074 chr2L 14757981 14758213 + 19 NA Intergenic Intergenic -2670 FBgn0028870 FBgn0028870 FBtr0080670 CG4691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8628 chr3L 21048408 21048564 + 19 NA intron (FBgn0026179, intron 1 of 5) protein_coding-intron (FBgn0026179, intron 1 of 5) 7160 FBgn0026179 FBgn0026179 FBtr0111038 siz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4811 chr2R 8264261 8264790 + 19 NA intron (FBgn0050045, intron 2 of 2) protein_coding-intron (FBgn0050045, intron 2 of 2) 350 FBgn0050045 FBgn0050045 FBtr0113359 Cpr49Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12881 chr3RHet 1837786 1837840 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3772 chr2L 22602136 22602288 + 19 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 42315 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_345 chr2L 1944618 1944685 + 19 NA TTS (FBgn0031374) protein_coding-TTS (FBgn0031374) 1058 FBgn0040719 FBgn0040719 FBtr0077871 CG15357 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7697 chr3L 11855866 11856065 + 19 NA exon (FBgn0085449, exon 1 of 3) protein_coding-exon (FBgn0085449, exon 1 of 3) 582 FBgn0085449 FBgn0085449 FBtr0330129 CG34420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12279 chr3R 25017150 25017433 + 19 NA intron (FBgn0039647, intron 1 of 7) protein_coding-intron (FBgn0039647, intron 1 of 6) 3424 FBgn0039647 FBgn0039647 FBtr0113304 CG14509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9925 chr3R 8155378 8155519 + 19 NA Intergenic Intergenic 6203 FBgn0038012 FBgn0038012 FBtr0082567 CG10013 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5544 chr2R 14797593 14797647 + 19 NA exon (FBgn0028669, exon 1 of 1) protein_coding-exon (FBgn0028669, exon 1 of 1) 1599 FBgn0028669 FBgn0028669 FBtr0086602 Vha100-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13562 chrX 5860341 5860395 + 19 NA promoter-TSS (FBgn0029830) protein_coding-promoter-TSS (FBgn0029830) 54 FBgn0029830 FBgn0029830 FBtr0070865 Grip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5638 chr2R 15656287 15656532 + 19 NA TTS (FBgn0034473) protein_coding-TTS (FBgn0034473) 2329 FBgn0034473 FBgn0034473 FBtr0086344 Or56a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7031 chr3L 4208203 4208318 + 19 NA exon (FBgn0035510, exon 2 of 2) protein_coding-exon (FBgn0035510, exon 2 of 2) 918 FBgn0035510 FBgn0035510 FBtr0073254 Cpr64Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7921 chr3L 13511250 13511304 + 19 NA exon (FBgn0036377, exon 2 of 2) protein_coding-exon (FBgn0036377, exon 2 of 2) 1428 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6734 chr3L 613956 614214 + 19 NA Intergenic Intergenic 2561 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2928 chr2L 18745968 18746022 + 19 NA Intergenic Intergenic 5637 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3297 chr2L 20778797 20778860 + 19 NA intron (FBgn0000251, intron 1 of 1) protein_coding-intron (FBgn0000251, intron 1 of 1) 7934 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_911 chr2L 6733166 6733385 + 19 NA TTS (FBgn0046704) protein_coding-TTS (FBgn0046704) 409 FBgn0031853 FBgn0031853 FBtr0300056 TTLL3B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7950 chr3L 13710430 13710594 + 19 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 85988 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5501 chr2R 14384066 14384130 + 19 NA intron (FBgn0028496, intron 2 of 18) protein_coding-intron (FBgn0028496, intron 2 of 18) 1398 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6598 chr2RHet 2129788 2129842 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4105 chr2R 2961761 2961815 + 19 NA promoter-TSS (FBgn0033141) protein_coding-promoter-TSS (FBgn0033141) -167 FBgn0033141 FBgn0033141 FBtr0300063 CG12831 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3414 chr2L 21608722 21609032 + 19 NA Intergenic Intergenic 9897 FBgn0032955 FBgn0032955 FBtr0100511 CG2201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13455 chrX 1465572 1465626 + 19 NA intron (FBgn0025390, intron 3 of 7) protein_coding-intron (FBgn0025390, intron 3 of 7) -13166 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13068 chrU 127620 127705 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12863 chr3RHet 1222823 1222904 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8790 chr3L 23835762 23835950 + 19 NA intron (FBgn0058470, intron 12 of 12) protein_coding-intron (FBgn0058470, intron 12 of 12) 40386 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11294 chr3R 18098011 18098102 + 19 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -20592 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1911 chr2L 14290208 14290300 + 19 NA promoter-TSS (FBgn0263648) ncRNA-promoter-TSS (FBgn0263648) -947 FBgn0263648 FBgn0263648 FBtr0310012 CR43639 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8525 chr3L 18741747 18741820 + 19 NA promoter-TSS (FBgn0036813) protein_coding-promoter-TSS (FBgn0036813) -4 FBgn0036813 FBgn0036813 FBtr0075055 Aut1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10539 chr3R 12645406 12645527 + 19 NA intron (FBgn0000014, intron 4 of 5) protein_coding-intron (FBgn0000014, intron 5 of 6) 10301 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12765 chr3R 27571691 27571757 + 19 NA promoter-TSS (FBgn0022349) protein_coding-promoter-TSS (FBgn0022349) -18 FBgn0000150 FBgn0000150 FBtr0085864 awd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3672 chr2L 22264777 22264861 + 19 NA Intergenic Intergenic 14941 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5762 chr2R 16710875 16710929 + 19 NA exon (FBgn0011674, exon 3 of 4) protein_coding-exon (FBgn0011674, exon 3 of 4) 9017 FBgn0016984 FBgn0016984 FBtr0071563 sktl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1067 chr2L 8333700 8333863 + 19 NA TTS (FBgn0032022) protein_coding-TTS (FBgn0032022) -4506 FBgn0032023 FBgn0032023 FBtr0079604 CG14274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4221 chr2R 3918940 3919241 + 19 NA promoter-TSS (FBgn0025360) protein_coding-promoter-TSS (FBgn0025360) 301 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8800 chr3L 23902465 23902682 + 19 NA exon (FBgn0264570, exon 2 of 2) ncRNA-exon (FBgn0264570, exon 2 of 2) 354 FBgn0264570 FBgn0264570 FBtr0333470 CR43942 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7764 chr3L 12322901 12323042 + 19 NA exon (FBgn0052105, exon 1 of 3) protein_coding-exon (FBgn0052105, exon 1 of 3) 639 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6518 chr2RHet 1872469 1872704 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8784 chr3L 23789943 23790474 + 19 NA Intergenic Intergenic 12877 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12247 chr3R 24819517 24819607 + 19 NA exon (FBgn0039620, exon 8 of 10) protein_coding-exon (FBgn0039620, exon 8 of 10) 14992 FBgn0263579 FBgn0263579 FBtr0309743 mir-4947 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5508 chr2R 14423994 14424216 + 19 NA promoter-TSS (FBgn0003067) protein_coding-promoter-TSS (FBgn0003067) -167 FBgn0003067 FBgn0003067 FBtr0086701 Pepck protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4692 chr2R 7465314 7465456 + 19 NA TTS (FBgn0033636) protein_coding-TTS (FBgn0033636) 10451 FBgn0082993 FBgn0082993 FBtr0113499 snoRNA:Psi28S-1936 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4526 chr2R 6208469 6208523 + 19 NA promoter-TSS (FBgn0250822) protein_coding-promoter-TSS (FBgn0250822) -491 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7014 chr3L 3948211 3948282 + 19 NA TTS (FBgn0035479) protein_coding-TTS (FBgn0035479) 355 FBgn0035478 FBgn0035478 FBtr0073164 CG10853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8328 chr3L 17075731 17075788 + 19 NA intron (FBgn0260943, intron 8 of 14) protein_coding-intron (FBgn0260943, intron 8 of 14) 27046 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3057 chr2L 19634604 19634866 + 19 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 48112 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6659 chr2RHet 2382666 2382753 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3389 chr2L 21370303 21370491 + 19 NA promoter-TSS (FBgn0032945) protein_coding-promoter-TSS (FBgn0032945) -691 FBgn0041245 FBgn0041245 FBtr0081522 Gr39b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5828 chr2R 17249639 17249693 + 19 NA intron (FBgn0000395, intron 3 of 6) protein_coding-intron (FBgn0000395, intron 3 of 6) -11317 FBgn0034624 FBgn0034624 FBtr0071611 CG17974 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1629 chr2L 12307612 12307812 + 19 NA intron (FBgn0000114, intron 8 of 8) protein_coding-intron (FBgn0000114, intron 9 of 11) -31136 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5421 chr2R 13708705 13708770 + 19 NA exon (FBgn0259211, exon 3 of 13) protein_coding-exon (FBgn0259211, exon 3 of 13) -2333 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6446 chr2RHet 1287452 1287551 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13761 chrX 16011069 16011201 + 19 NA Intergenic Intergenic 7230 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6471 chr2RHet 1448503 1448761 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5324 chr2R 12618887 12619036 + 19 NA promoter-TSS (FBgn0050463) protein_coding-promoter-TSS (FBgn0050463) 6394 FBgn0262564 FBgn0262564 FBtr0304892 CG43104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1445 chr2L 10605402 10605461 + 19 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -23769 FBgn0085190 FBgn0085190 FBtr0112352 CG34161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6961 chr3L 2941108 2941162 + 19 NA exon (FBgn0262593, exon 5 of 9) protein_coding-exon (FBgn0262593, exon 5 of 9) 10483 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2495 chr2L 16582897 16582986 + 19 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -23004 FBgn0051815 FBgn0051815 FBtr0080870 CG31815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6251 chr2R 20742358 20742450 + 19 NA Intergenic Intergenic 5905 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5433 chr2R 13822980 13823050 + 19 NA Intergenic Intergenic 21060 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5745 chr2R 16441049 16441103 + 19 NA Intergenic Intergenic -1485 FBgn0034519 FBgn0034519 FBtr0100677 CG18065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10325 chr3R 11406267 11406474 + 19 NA Intergenic Intergenic -27876 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11996 chr3R 23882747 23882801 + 19 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 30440 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1965 chr2L 14401510 14401638 + 19 NA intron (FBgn0004858, intron 1 of 2) protein_coding-intron (FBgn0004858, intron 1 of 2) 7973 FBgn0004858 FBgn0004858 FBtr0080637 elB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2424 chr2L 16129047 16129199 + 19 NA Intergenic Intergenic -4385 FBgn0028884 FBgn0028884 FBtr0080816 CG4892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6455 chr2RHet 1303627 1303879 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3237 chr2L 20537499 20537557 + 19 NA Intergenic Intergenic -24896 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6454 chr2RHet 1300505 1301050 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3606 chr2L 22077314 22077439 + 19 NA Intergenic Intergenic -2296 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11316 chr3R 18302111 18302181 + 19 NA intron (FBgn0038975, intron 8 of 13) protein_coding-intron (FBgn0038975, intron 8 of 13) -4464 FBgn0263554 FBgn0263554 FBtr0309683 mir-4952 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1425 chr2L 10185227 10185281 + 19 NA exon (FBgn0028675, exon 20 of 24) protein_coding-exon (FBgn0028675, exon 20 of 24) 6242 FBgn0051874 FBgn0051874 FBtr0079964 CG31874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10314 chr3R 11351118 11351176 + 19 NA Intergenic Intergenic 6048 FBgn0051296 FBgn0051296 FBtr0083155 CG31296 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9528 chr3R 4788651 4788890 + 19 NA promoter-TSS (FBgn0037645) protein_coding-promoter-TSS (FBgn0037645) -87 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7339 chr3L 7657350 7657406 + 19 NA exon (FBgn0261788, exon 2 of 6) protein_coding-exon (FBgn0261788, exon 2 of 6) -9526 FBgn0035807 FBgn0035807 FBtr0076821 CG7492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12510 chr3R 26084471 26084650 + 19 NA Intergenic Intergenic 5656 FBgn0039761 FBgn0039761 FBtr0085618 CG18404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8769 chr3L 23716263 23716339 + 19 NA Intergenic Intergenic -3628 FBgn0058298 FBgn0058298 FBtr0111169 CG40298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12903 chr3RHet 2380321 2380493 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1686 chr2L 12674530 12674584 + 19 NA intron (FBgn0004394, intron 3 of 4) protein_coding-intron (FBgn0004394, intron 3 of 4) -4049 FBgn0004394 FBgn0004394 FBtr0080393 pdm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6417 chr2RHet 862175 862229 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7214 chr3L 6661086 6661146 + 19 NA promoter-TSS (FBgn0041232) protein_coding-promoter-TSS (FBgn0041232) -200 FBgn0041232 FBgn0041232 FBtr0300026 Gr65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13064 chrU 86580 87157 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_505 chr2L 3431007 3431133 + 19 NA Intergenic Intergenic -4428 FBgn0031530 FBgn0031530 FBtr0077592 pgant2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7085 chr3L 5339469 5339534 + 19 NA exon (FBgn0016031, exon 3 of 5) protein_coding-exon (FBgn0016031, exon 3 of 5) 4317 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_2640 chr2L 17238759 17238909 + 19 NA promoter-TSS (FBgn0040987) protein_coding-promoter-TSS (FBgn0040987) -525 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4243 chr2R 4109981 4110035 + 19 NA exon (FBgn0053087, exon 19 of 23) protein_coding-exon (FBgn0053087, exon 19 of 23) 6224 FBgn0085246 FBgn0085246 FBtr0112410 CG34217 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11687 chr3R 22498635 22498701 + 19 NA intron (FBgn0250908, intron 1 of 8) protein_coding-intron (FBgn0250908, intron 1 of 8) 9020 FBgn0250908 FBgn0250908 FBtr0290328 beat-VII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3874 chr2LHet 193816 194081 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11829 chr3R 23205523 23205713 + 19 NA intron (FBgn0016061, intron 16 of 16) protein_coding-intron (FBgn0016061, intron 16 of 16) -10031 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2821 chr2L 18026601 18026655 + 19 NA intron (FBgn0243486, intron 1 of 14) protein_coding-intron (FBgn0243486, intron 1 of 14) 14221 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12721 chr3R 27323270 27323406 + 19 NA Intergenic Intergenic -1623 FBgn0039851 FBgn0039851 FBtr0085790 mey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13123 chrU 376612 376721 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6592 chr2RHet 2072559 2072617 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6515 chr2RHet 1865936 1866160 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3265 chr2L 20626654 20626727 + 19 NA Intergenic Intergenic -7867 FBgn0032868 FBgn0032868 FBtr0081382 CG17472 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_210 chr2L 1330189 1330243 + 19 NA TTS (FBgn0011294) protein_coding-TTS (FBgn0011294) 1055 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11508 chr3R 21774525 21774709 + 19 NA intron (FBgn0039396, intron 1 of 6) protein_coding-intron (FBgn0039396, intron 1 of 6) 7375 FBgn0039396 FBgn0039396 FBtr0304043 CcapR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8465 chr3L 18028231 18028322 + 19 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -5141 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8905 chr3LHet 1440559 1440662 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5300 chr2R 12443406 12443460 + 19 NA exon (FBgn0034135, exon 7 of 10) protein_coding-exon (FBgn0034135, exon 7 of 10) 3668 FBgn0034135 FBgn0034135 FBtr0087097 Syn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9485 chr3R 4424934 4425143 + 19 NA intron (FBgn0261929, intron 2 of 6) protein_coding-intron (FBgn0261929, intron 2 of 6) 21111 FBgn0261929 FBgn0261929 FBtr0330144 CG42796 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2254 chr2L 15437828 15437882 + 19 NA Intergenic Intergenic 4493 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1409 chr2L 10036842 10037055 + 19 NA exon (FBgn0027600, exon 3 of 6) protein_coding-exon (FBgn0027600, exon 3 of 6) 4254 FBgn0027600 FBgn0027600 FBtr0079934 obst-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8825 chr3L 24123256 24123310 + 19 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 55954 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3213 chr2L 20475817 20475881 + 19 NA Intergenic Intergenic 1700 FBgn0262879 FBgn0262879 FBtr0306286 CG43234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10427 chr3R 11955524 11955614 + 19 NA intron (FBgn0003319, intron 1 of 10) protein_coding-intron (FBgn0003319, intron 1 of 10) 1118 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12199 chr3R 24600547 24600986 + 19 NA Intergenic Intergenic -14573 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12584 chr3R 26745352 26745454 + 19 NA intron (FBgn0020912, intron 2 of 4) protein_coding-intron (FBgn0020912, intron 2 of 4) 6793 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13016 chr4 1035647 1035936 + 19 NA exon (FBgn0025741, exon 6 of 10) protein_coding-exon (FBgn0025741, exon 6 of 10) 11929 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13073 chrU 131952 132092 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4071 chr2R 2679087 2679217 + 19 NA intron (FBgn0085421, intron 4 of 19) protein_coding-intron (FBgn0085421, intron 4 of 19) -10156 FBgn0000473 FBgn0000473 FBtr0086133 Cyp6a2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9210 chr3R 2534298 2534359 + 19 NA exon (FBgn0051481, exon 9 of 9) protein_coding-exon (FBgn0051481, exon 9 of 9) 4524 FBgn0004783 FBgn0004783 FBtr0081691 Ccp84Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9142 chr3R 2054209 2054432 + 19 NA exon (FBgn0037413, exon 2 of 2) protein_coding-exon (FBgn0037413, exon 2 of 2) 1203 FBgn0037413 FBgn0037413 FBtr0302937 Osi5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4198 chr2R 3784228 3784282 + 19 NA intron (FBgn0050377, intron 2 of 4) protein_coding-intron (FBgn0050377, intron 2 of 4) 6675 FBgn0050377 FBgn0050377 FBtr0088844 CG30377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9322 chr3R 3129142 3129203 + 19 NA intron (FBgn0259172, intron 2 of 8) protein_coding-intron (FBgn0259172, intron 2 of 8) -1142 FBgn0260713 FBgn0260713 FBtr0301214 CG42544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1846 chr2L 13915077 13915140 + 19 NA exon (FBgn0032536, exon 1 of 9) protein_coding-exon (FBgn0032536, exon 1 of 9) 383 FBgn0032536 FBgn0032536 FBtr0100327 Ance-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5258 chr2R 12125281 12125473 + 19 NA TTS (FBgn0034097) protein_coding-TTS (FBgn0034097) 1100 FBgn0034097 FBgn0034097 FBtr0087132 CG3687 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6210 chr2R 20367151 20367205 + 19 NA intron (FBgn0035010, intron 1 of 8) protein_coding-intron (FBgn0035010, intron 1 of 8) 4269 FBgn0035009 FBgn0035009 FBtr0072297 CG16837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4517 chr2R 6107690 6107842 + 19 NA intron (FBgn0000448, intron 1 of 8) protein_coding-intron (FBgn0000448, intron 1 of 8) 7692 FBgn0000448 FBgn0000448 FBtr0306346 Hr46 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12226 chr3R 24751630 24752065 + 19 NA intron (FBgn0039617, intron 8 of 10) protein_coding-intron (FBgn0039617, intron 8 of 10) 3081 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4077 chr2R 2715846 2715925 + 19 NA promoter-TSS (FBgn0033108) protein_coding-promoter-TSS (FBgn0033108) -28 FBgn0033108 FBgn0033108 FBtr0086161 CG15236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9950 chr3R 8426753 8426845 + 19 NA Intergenic Intergenic 26637 FBgn0005671 FBgn0005671 FBtr0301661 Vha55 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_952 chr2L 6998691 6998745 + 19 NA intron (FBgn0031879, intron 3 of 13) protein_coding-intron (FBgn0031879, intron 3 of 11) 11594 FBgn0031879 FBgn0031879 FBtr0307073 uif protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5247 chr2R 12017421 12017504 + 19 NA intron (FBgn0086676, intron 1 of 7) protein_coding-intron (FBgn0086676, intron 1 of 7) 4974 FBgn0086676 FBgn0086676 FBtr0089593 spin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5461 chr2R 14072762 14072888 + 19 NA exon (FBgn0053958, exon 12 of 13) protein_coding-exon (FBgn0053958, exon 12 of 13) -1230 FBgn0034315 FBgn0034315 FBtr0086771 CG5721 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3613 chr2L 22084473 22084611 + 19 NA Intergenic Intergenic 4870 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7754 chr3L 12294327 12294582 + 19 NA Intergenic Intergenic -5231 FBgn0036274 FBgn0036274 FBtr0301071 CG4328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10322 chr3R 11396168 11396458 + 19 NA Intergenic Intergenic -17819 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12902 chr3RHet 2374421 2374490 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6490 chr2RHet 1681234 1681289 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12169 chr3R 24535215 24535323 + 19 NA intron (FBgn0027655, intron 9 of 28) protein_coding-intron (FBgn0027655, intron 9 of 28) 13305 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2508 chr2L 16699107 16699230 + 19 NA TTS (FBgn0262386) pre_miRNA-TTS (FBgn0262386) 410 FBgn0262413 FBgn0262413 FBtr0304346 mir-9b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8364 chr3L 17264840 17264894 + 19 NA Intergenic Intergenic 7351 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3791 chr2L 22640698 22640879 + 19 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 3739 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12704 chr3R 27202323 27202465 + 19 NA Intergenic Intergenic 4245 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10688 chr3R 13682428 13682493 + 19 NA intron (FBgn0261649, intron 5 of 9) protein_coding-intron (FBgn0261649, intron 5 of 9) 45194 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2855 chr2L 18164919 18165132 + 19 NA exon (FBgn0261804, exon 13 of 15) protein_coding-exon (FBgn0261804, exon 13 of 15) -6339 FBgn0032671 FBgn0032671 FBtr0081062 CG7200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3961 chr2R 848251 848579 + 19 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 11243 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13849 chrX 21682689 21682749 + 19 NA Intergenic Intergenic -163871 FBgn0031183 FBgn0031183 FBtr0077344 CG14621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1696 chr2L 12747716 12747805 + 19 NA Intergenic Intergenic 14080 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6116 chr2R 19563579 19563849 + 19 NA promoter-TSS (FBgn0034886) protein_coding-promoter-TSS (FBgn0034886) 3729 FBgn0250870 FBgn0250870 FBtr0290304 CG42241 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1465 chr2L 10774067 10774374 + 19 NA exon (FBgn0051869, exon 7 of 7) protein_coding-exon (FBgn0051869, exon 7 of 7) 3352 FBgn0032299 FBgn0032299 FBtr0080136 CG17127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11339 chr3R 18852631 18852689 + 19 NA promoter-TSS (FBgn0039039) protein_coding-promoter-TSS (FBgn0039039) -225 FBgn0039039 FBgn0039039 FBtr0084364 lmd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2121 chr2L 14921146 14921280 + 19 NA intron (FBgn0259213, intron 11 of 19) protein_coding-intron (FBgn0259213, intron 11 of 19) -3522 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10605 chr3R 13126555 13126609 + 19 NA Intergenic Intergenic 13072 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8643 chr3L 21472784 21473009 + 19 NA Intergenic Intergenic -3317 FBgn0014143 FBgn0014143 FBtr0078395 croc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3761 chr2L 22589306 22589686 + 19 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 55031 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_619 chr2L 4307817 4308325 + 19 NA exon (FBgn0010473, exon 8 of 10) protein_coding-exon (FBgn0010473, exon 8 of 10) -16502 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8045 chr3L 14394455 14394531 + 19 NA exon (FBgn0036422, exon 2 of 3) protein_coding-exon (FBgn0036422, exon 2 of 3) 1332 FBgn0036422 FBgn0036422 FBtr0075729 CG3868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5285 chr2R 12335651 12335893 + 19 NA TTS (FBgn0034129) protein_coding-TTS (FBgn0034129) 2281 FBgn0034129 FBgn0034129 FBtr0087159 CG15925 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3926 chr2R 544194 544303 + 19 NA Intergenic Intergenic -15114 FBgn0040005 FBgn0040005 FBtr0111292 CG17883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1954 chr2L 14381973 14382241 + 19 NA promoter-TSS (FBgn0020258) protein_coding-promoter-TSS (FBgn0020258) -937 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8102 chr3L 14951838 14951901 + 19 NA Intergenic Intergenic -10575 FBgn0026320 FBgn0026320 FBtr0075620 Tom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2162 chr2L 15093573 15093697 + 19 NA exon (FBgn0028879, exon 13 of 17) protein_coding-exon (FBgn0028879, exon 13 of 17) -15770 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8315 chr3L 16923608 16923862 + 19 NA TTS (FBgn0036678) protein_coding-TTS (FBgn0036678) -3201 FBgn0036677 FBgn0036677 FBtr0075307 CG13023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_646 chr2L 4437510 4437589 + 19 NA promoter-TSS (FBgn0262358) protein_coding-promoter-TSS (FBgn0262358) -238 FBgn0262358 FBgn0262358 FBtr0304638 CG43056 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12428 chr3R 25536761 25537266 + 19 NA Intergenic Intergenic -3248 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12405 chr3R 25519229 25519446 + 19 NA exon (FBgn0039683, exon 3 of 4) protein_coding-exon (FBgn0039683, exon 3 of 4) 1024 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7266 chr3L 6990353 6990514 + 19 NA Intergenic Intergenic -1510 FBgn0260660 FBgn0260660 FBtr0308094 mp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_55 chr2L 715121 715297 + 19 NA promoter-TSS (FBgn0000497) protein_coding-promoter-TSS (FBgn0000497) -241 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2107 chr2L 14883251 14883328 + 19 NA intron (FBgn0013301, intron 1 of 2) protein_coding-intron (FBgn0013301, intron 1 of 2) 426 FBgn0013301 FBgn0013301 FBtr0080681 Mst35Bb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11837 chr3R 23220818 23221067 + 19 NA intron (FBgn0016061, intron 8 of 16) protein_coding-intron (FBgn0016061, intron 8 of 16) -25355 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5244 chr2R 11944084 11944287 + 19 NA intron (FBgn0034071, intron 11 of 12) protein_coding-intron (FBgn0034071, intron 11 of 12) 8611 FBgn0262446 FBgn0262446 FBtr0304457 mir-137 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6676 chr2RHet 2778689 2778743 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8579 chr3L 20034432 20034625 + 19 NA Intergenic Intergenic -12408 FBgn0036932 FBgn0036932 FBtr0302366 CG14184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10740 chr3R 13983615 13983682 + 19 NA promoter-TSS (FBgn0038568) protein_coding-promoter-TSS (FBgn0038568) -775 FBgn0038568 FBgn0038568 FBtr0083547 CG14315 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9100 chr3R 1694529 1694583 + 19 NA intron (FBgn0083949, intron 14 of 16) protein_coding-intron (FBgn0083949, intron 14 of 16) -7537 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3892 chr2LHet 299390 299485 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10294 chr3R 11246161 11246247 + 19 NA TTS (FBgn0038339) protein_coding-TTS (FBgn0038339) -2699 FBgn0262397 FBgn0262397 FBtr0304297 mir-2c pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13688 chrX 12821911 12821984 + 19 NA intron (FBgn0086675, intron 2 of 6) protein_coding-intron (FBgn0086675, intron 2 of 7) -10603 FBgn0086675 FBgn0086675 FBtr0333319 fne protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6722 chr3L 479593 479758 + 19 NA intron (FBgn0001316, intron 4 of 18) protein_coding-intron (FBgn0001316, intron 5 of 18) 20776 FBgn0085296 FBgn0085296 FBtr0112462 CG34267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12877 chr3RHet 1700337 1700724 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_521 chr2L 3575423 3575489 + 19 NA promoter-TSS (FBgn0264363) protein_coding-promoter-TSS (FBgn0264363) 106 FBgn0264370 FBgn0264370 FBtr0332221 CR43822 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13105 chrU 232853 232935 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3624 chr2L 22104992 22105287 + 19 NA promoter-TSS (FBgn0051703) protein_coding-promoter-TSS (FBgn0051703) 373 FBgn0040519 FBgn0040519 FBtr0306060 CG15219 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8775 chr3L 23759061 23759115 + 19 NA Intergenic Intergenic -18243 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4587 chr2R 6589444 6589632 + 19 NA intron (FBgn0024836, intron 2 of 5) protein_coding-intron (FBgn0024836, intron 2 of 5) -23237 FBgn0033542 FBgn0033542 FBtr0088215 CG12309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6180 chr2R 20216484 20216538 + 19 NA Intergenic Intergenic 5318 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13234 chrU 2703328 2703523 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6681 chr2RHet 3008441 3008513 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13264 chrU 5944583 5944755 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9343 chr3R 3240408 3240631 + 19 NA Intergenic Intergenic -4201 FBgn0051544 FBgn0051544 FBtr0081532 CG31544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10792 chr3R 14341621 14341675 + 19 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 29660 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8978 chr3R 652238 652292 + 19 NA Intergenic Intergenic 3970 FBgn0037283 FBgn0037283 FBtr0078874 CG14658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1486 chr2L 11030772 11030842 + 19 NA exon (FBgn0032330, exon 4 of 7) protein_coding-exon (FBgn0032330, exon 4 of 7) -4042 FBgn0040967 FBgn0040967 FBtr0080160 CG18666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12339 chr3R 25301247 25301301 + 19 NA intron (FBgn0004369, intron 11 of 18) protein_coding-intron (FBgn0004369, intron 5 of 12) -4146 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7647 chr3L 11336998 11337165 + 19 NA Intergenic Intergenic 20904 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7098 chr3L 5628816 5628877 + 19 NA promoter-TSS (FBgn0035625) protein_coding-promoter-TSS (FBgn0035625) -7901 FBgn0035625 FBgn0035625 FBtr0331809 Blimp-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9659 chr3R 6011025 6011174 + 19 NA intron (FBgn0037796, intron 2 of 10) protein_coding-intron (FBgn0037796, intron 2 of 9) 4216 FBgn0037796 FBgn0037796 FBtr0306090 CG12814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11124 chr3R 16505548 16505636 + 19 NA TTS (FBgn0263406) ncRNA-TTS (FBgn0263406) 1687 FBgn0263406 FBgn0263406 FBtr0309185 CR43452 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11840 chr3R 23225239 23225479 + 19 NA intron (FBgn0016061, intron 3 of 16) protein_coding-intron (FBgn0016061, intron 3 of 16) -29772 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7185 chr3L 6369304 6369403 + 19 NA Intergenic Intergenic -23863 FBgn0035699 FBgn0035699 FBtr0077007 CG13300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8773 chr3L 23747989 23748195 + 19 NA Intergenic Intergenic 17032 FBgn0040056 FBgn0040056 FBtr0333914 CG17698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7475 chr3L 9036552 9036675 + 19 NA exon (FBgn0028789, exon 3 of 5) protein_coding-exon (FBgn0028789, exon 3 of 5) 1684 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12184 chr3R 24571285 24571347 + 19 NA promoter-TSS (FBgn0039595) protein_coding-promoter-TSS (FBgn0039595) -831 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9432 chr3R 3993117 3993171 + 19 NA exon (FBgn0001138, exon 4 of 9) protein_coding-exon (FBgn0001138, exon 4 of 9) 14020 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10374 chr3R 11709662 11709749 + 19 NA Intergenic Intergenic 6132 FBgn0038380 FBgn0038380 FBtr0083249 CG14877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5039 chr2R 10210042 10210096 + 19 NA intron (FBgn0085408, intron 2 of 9) protein_coding-intron (FBgn0085408, intron 2 of 9) -9831 FBgn0085408 FBgn0085408 FBtr0112616 Shroom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4226 chr2R 3926841 3926914 + 19 NA intron (FBgn0025360, intron 3 of 3) protein_coding-intron (FBgn0025360, intron 3 of 3) 8088 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_350 chr2L 1962952 1963145 + 19 NA intron (FBgn0031375, intron 1 of 1) protein_coding-intron (FBgn0031375, intron 1 of 1) -2378 FBgn0051942 FBgn0051942 FBtr0077812 tRNA:CR31942 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9553 chr3R 5102293 5102347 + 19 NA Intergenic Intergenic 9566 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5051 chr2R 10318543 10318610 + 19 NA intron (FBgn0013725, intron 1 of 1) protein_coding-intron (FBgn0013725, intron 1 of 1) 1264 FBgn0013725 FBgn0013725 FBtr0087516 phyl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12838 chr3RHet 603034 603394 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9911 chr3R 8088033 8088087 + 19 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) 8151 FBgn0038008 FBgn0038008 FBtr0082561 CG3942 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11789 chr3R 23042922 23043185 + 19 NA exon (FBgn0054006, exon 2 of 3) protein_coding-exon (FBgn0054006, exon 2 of 3) 643 FBgn0054006 FBgn0054006 FBtr0303711 CG34006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7398 chr3L 8372307 8372399 + 19 NA exon (FBgn0001253, exon 3 of 7) protein_coding-exon (FBgn0001253, exon 3 of 7) 6848 FBgn0001253 FBgn0001253 FBtr0076607 ImpE1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10659 chr3R 13481568 13481915 + 19 NA intron (FBgn0038532, intron 2 of 7) protein_coding-intron (FBgn0038532, intron 1 of 6) -1126 FBgn0051577 FBgn0051577 FBtr0083475 tRNA:CR31577 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10388 chr3R 11777376 11777756 + 19 NA promoter-TSS (FBgn0051088) protein_coding-promoter-TSS (FBgn0051088) -901 FBgn0051088 FBgn0051088 FBtr0083241 CG31088 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2772 chr2L 17851115 17851263 + 19 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 2 of 14) 24058 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_383 chr2L 2352101 2352172 + 19 NA intron (FBgn0031414, intron 7 of 13) protein_coding-intron (FBgn0031413, intron 1 of 5) 5220 FBgn0031413 FBgn0031413 FBtr0077799 CG9967 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12574 chr3R 26725804 26725995 + 19 NA TTS (FBgn0053483) protein_coding-TTS (FBgn0053483) 1984 FBgn0053483 FBgn0053483 FBtr0089295 CG33483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6443 chr2RHet 1266463 1266522 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12216 chr3R 24615219 24615658 + 19 NA promoter-TSS (FBgn0039599) protein_coding-promoter-TSS (FBgn0039599) 99 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12887 chr3RHet 2033392 2033446 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10525 chr3R 12577989 12578046 + 19 NA promoter-TSS (FBgn0020556) ncRNA-promoter-TSS (FBgn0020556) -961 FBgn0063261 FBgn0063261 FBtr0083345 CG31275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3646 chr2L 22197139 22197331 + 19 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 17030 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10341 chr3R 11527091 11527145 + 19 NA Intergenic Intergenic -3299 FBgn0038354 FBgn0038354 FBtr0083165 CG5404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_250 chr2L 1413699 1413908 + 19 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 6646 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6757 chr3L 685239 685300 + 19 NA TTS (FBgn0035154) protein_coding-TTS (FBgn0035154) 280 FBgn0035153 FBgn0035153 FBtr0072610 ebd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5049 chr2R 10313820 10313899 + 19 NA TTS (FBgn0013725) protein_coding-TTS (FBgn0013725) 5981 FBgn0013725 FBgn0013725 FBtr0087516 phyl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_258 chr2L 1445309 1445822 + 19 NA Intergenic Intergenic 2839 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11599 chr3R 22161029 22161101 + 19 NA intron (FBgn0053970, intron 2 of 8) protein_coding-intron (FBgn0053970, intron 2 of 8) -10068 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9439 chr3R 4036602 4036657 + 19 NA Intergenic Intergenic -6077 FBgn0261290 FBgn0261290 FBtr0091780 CheA84a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13084 chrU 172435 172489 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8831 chr3L 24182083 24182137 + 19 NA intron (FBgn0011288, intron 4 of 7) protein_coding-intron (FBgn0011288, intron 4 of 7) 114781 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12961 chr4 732196 732305 + 19 NA intron (FBgn0005558, intron 3 of 8) protein_coding-intron (FBgn0005558, intron 2 of 7) 6547 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11022 chr3R 15897166 15897259 + 19 NA Intergenic Intergenic 10960 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8255 chr3L 16378587 16378645 + 19 NA promoter-TSS (FBgn0036624) protein_coding-promoter-TSS (FBgn0036624) 293 FBgn0036623 FBgn0036623 FBtr0075420 CG4729 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11057 chr3R 16054666 16054886 + 19 NA intron (FBgn0083975, intron 12 of 13) protein_coding-intron (FBgn0083975, intron 12 of 13) -19263 FBgn0038775 FBgn0038775 FBtr0083874 CG17199 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3454 chr2L 21768631 21769035 + 19 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 10823 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4791 chr2R 8086372 8086426 + 19 NA promoter-TSS (FBgn0033698) protein_coding-promoter-TSS (FBgn0033698) -56 FBgn0033698 FBgn0033698 FBtr0088008 CG8858 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11132 chr3R 16549806 16549860 + 19 NA Intergenic Intergenic -7520 FBgn0051205 FBgn0051205 FBtr0300451 CG31205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2530 chr2L 16844537 16844765 + 19 NA intron (FBgn0032614, intron 2 of 4) protein_coding-intron (FBgn0032614, intron 3 of 5) 2546 FBgn0032614 FBgn0032614 FBtr0080927 CG13284 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4034 chr2R 2039392 2039755 + 19 NA TTS (FBgn0011938) tRNA-TTS (FBgn0011938) 608 FBgn0011938 FBgn0011938 FBtr0086016 tRNA:N5:42Ah tRNA Nup98-S2-pascual-garcia2017_R1_peak_9277 chr3R 2839166 2839510 + 19 NA Intergenic Intergenic -38719 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9870 chr3R 7767472 7767581 + 19 NA intron (FBgn0037963, intron 2 of 15) protein_coding-intron (FBgn0037963, intron 2 of 15) 7325 FBgn0037963 FBgn0037963 FBtr0082513 Cad87A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9770 chr3R 6873083 6873291 + 19 NA exon (FBgn0083950, exon 16 of 16) protein_coding-exon (FBgn0083950, exon 16 of 16) -40955 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8435 chr3L 17714989 17715049 + 19 NA intron (FBgn0052183, intron 5 of 9) protein_coding-intron (FBgn0052183, intron 5 of 9) -2065 FBgn0261294 FBgn0261294 FBtr0091928 CheB74a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8778 chr3L 23763261 23763318 + 19 NA Intergenic Intergenic -14042 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13014 chr4 1026460 1026824 + 19 NA intron (FBgn0019650, intron 8 of 8) protein_coding-intron (FBgn0019650, intron 8 of 8) 16291 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10684 chr3R 13660442 13660584 + 19 NA intron (FBgn0261649, intron 2 of 9) protein_coding-intron (FBgn0261649, intron 2 of 9) 23247 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2412 chr2L 16087133 16087308 + 19 NA Intergenic Intergenic -7789 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8838 chr3L 24343611 24343767 + 19 NA intron (FBgn0259697, intron 2 of 5) protein_coding-intron (FBgn0259697, intron 2 of 5) 25722 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13242 chrU 3418766 3418901 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10005 chr3R 8771202 8771275 + 19 NA Intergenic Intergenic -16236 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13631 chrX 9578924 9578991 + 19 NA intron (FBgn0261617, intron 1 of 13) protein_coding-intron (FBgn0261617, intron 1 of 13) 1734 FBgn0261617 FBgn0261617 FBtr0302722 nej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10882 chr3R 15030723 15030822 + 19 NA Intergenic Intergenic -7143 FBgn0025680 FBgn0025680 FBtr0083736 cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13132 chrU 546117 546171 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10512 chr3R 12511914 12512007 + 19 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -30471 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9926 chr3R 8186059 8186129 + 19 NA exon (FBgn0038017, exon 2 of 3) protein_coding-exon (FBgn0038017, exon 2 of 3) 361 FBgn0038017 FBgn0038017 FBtr0082568 CG4115 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2767 chr2L 17837397 17837454 + 19 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 1 of 13) -24753 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5178 chr2R 11371042 11371119 + 19 NA promoter-TSS (FBgn0034021) protein_coding-promoter-TSS (FBgn0034021) -742 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3512 chr2L 21881382 21881443 + 19 NA Intergenic Intergenic -12815 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6500 chr2RHet 1721158 1721214 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9108 chr3R 1779137 1779191 + 19 NA Intergenic Intergenic 7543 FBgn0040679 FBgn0040679 FBtr0078657 CG11373 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_65 chr2L 742588 742664 + 19 NA promoter-TSS (FBgn0026438) protein_coding-promoter-TSS (FBgn0026438) 1769 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9804 chr3R 7154083 7154327 + 19 NA Intergenic Intergenic -4695 FBgn0004595 FBgn0004595 FBtr0304607 pros protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10916 chr3R 15276614 15276668 + 19 NA intron (FBgn0051221, intron 3 of 4) protein_coding-intron (FBgn0051221, intron 3 of 4) 12147 FBgn0038708 FBgn0038708 FBtr0083769 CG6255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_986 chr2L 7314905 7315092 + 19 NA exon (FBgn0004009, exon 5 of 5) protein_coding-exon (FBgn0004009, exon 5 of 5) 7837 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9199 chr3R 2483558 2483619 + 19 NA promoter-TSS (FBgn0262801) protein_coding-promoter-TSS (FBgn0262801) -16 FBgn0262801 FBgn0262801 FBtr0081687 twr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6313 chr2RHet 117343 117411 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8957 chr3R 421639 421693 + 19 NA Intergenic Intergenic -17300 FBgn0052945 FBgn0052945 FBtr0078896 CG32945 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5547 chr2R 14811284 14811714 + 19 NA intron (FBgn0034408, intron 4 of 7) protein_coding-intron (FBgn0034408, intron 4 of 7) -12280 FBgn0028669 FBgn0028669 FBtr0086602 Vha100-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7625 chr3L 10949787 10949841 + 19 NA Intergenic Intergenic 12258 FBgn0054050 FBgn0054050 FBtr0100105 CG34050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10573 chr3R 12795789 12796110 + 19 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -4977 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11812 chr3R 23156014 23156098 + 19 NA exon (FBgn0039511, exon 1 of 1) protein_coding-exon (FBgn0039511, exon 1 of 1) 548 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7065 chr3L 4870114 4870236 + 19 NA exon (FBgn0035581, exon 16 of 52) protein_coding-exon (FBgn0035581, exon 16 of 52) 8871 FBgn0035581 FBgn0035581 FBtr0289983 CG17150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6763 chr3L 769511 769596 + 19 NA promoter-TSS (FBgn0052480) tRNA-promoter-TSS (FBgn0052480) 50 FBgn0052480 FBgn0052480 FBtr0072579 tRNA:CR32480 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3785 chr2L 22626041 22626095 + 19 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 18459 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3695 chr2L 22341199 22341409 + 19 NA TTS (FBgn0263091) pseudogene-TTS (FBgn0263091) 682 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_13731 chrX 13773862 13773916 + 19 NA intron (FBgn0263115, intron 6 of 7) protein_coding-intron (FBgn0263115, intron 5 of 7) -22732 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8988 chr3R 708667 708815 + 19 NA Intergenic Intergenic -4486 FBgn0020280 FBgn0020280 FBtr0078852 laf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8816 chr3L 24113808 24114037 + 19 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 46593 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3154 chr2L 20115318 20115372 + 19 NA Intergenic Intergenic -11255 FBgn0032851 FBgn0032851 FBtr0089388 CG13970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9466 chr3R 4289919 4289975 + 19 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 13368 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8371 chr3L 17304470 17304524 + 19 NA Intergenic Intergenic -3627 FBgn0262376 FBgn0262376 FBtr0304211 mir-219 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4401 chr2R 5205302 5205356 + 19 NA exon (FBgn0033403, exon 3 of 4) protein_coding-exon (FBgn0033403, exon 3 of 4) -4722 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2100 chr2L 14853475 14853529 + 19 NA Intergenic Intergenic -1753 FBgn0028886 FBgn0028886 FBtr0080686 CG15279 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12530 chr3R 26345357 26345411 + 19 NA exon (FBgn0027654, exon 4 of 5) protein_coding-exon (FBgn0027654, exon 4 of 5) 4838 FBgn0039784 FBgn0039784 FBtr0085657 CG9698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13850 chrX 21808374 21808517 + 19 NA Intergenic Intergenic -38145 FBgn0031183 FBgn0031183 FBtr0077344 CG14621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11977 chr3R 23827828 23828027 + 19 NA Intergenic Intergenic -11454 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2964 chr2L 19088946 19089337 + 19 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -10113 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12298 chr3R 25161509 25161654 + 19 NA Intergenic Intergenic -16245 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_679 chr2L 4684534 4684641 + 19 NA promoter-TSS (FBgn0000227) protein_coding-promoter-TSS (FBgn0000227) -128 FBgn0000227 FBgn0000227 FBtr0077423 Bsg25A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6348 chr2RHet 464155 464229 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_493 chr2L 3345858 3346101 + 19 NA intron (FBgn0020445, intron 3 of 9) protein_coding-intron (FBgn0020445, intron 2 of 8) 9021 FBgn0020445 FBgn0020445 FBtr0089980 E23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6753 chr3L 660024 660236 + 19 NA Intergenic Intergenic 5767 FBgn0035150 FBgn0035150 FBtr0072557 Rev1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6527 chr2RHet 1891998 1892529 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8419 chr3L 17660966 17661155 + 19 NA TTS (FBgn0065088) ncRNA-TTS (FBgn0065088) 770 FBgn0065088 FBgn0065088 FBtr0091663 snmRNA:641 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4249 chr2R 4194642 4194784 + 19 NA Intergenic Intergenic 9093 FBgn0262440 FBgn0262440 FBtr0304435 mir-280 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8165 chr3L 15708307 15708361 + 19 NA Intergenic Intergenic -1219 FBgn0260777 FBgn0260777 FBtr0331799 CG42571 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11059 chr3R 16059662 16059775 + 19 NA intron (FBgn0083975, intron 12 of 13) protein_coding-intron (FBgn0083975, intron 12 of 13) -24205 FBgn0038775 FBgn0038775 FBtr0083874 CG17199 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3825 chr2L 22763235 22763289 + 19 NA Intergenic Intergenic 26310 FBgn0041004 FBgn0041004 FBtr0306550 CG17715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3236 chr2L 20536764 20536877 + 19 NA Intergenic Intergenic -25604 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13313 chrUextra 456760 457016 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10379 chr3R 11738041 11738099 + 19 NA TTS (FBgn0085304) protein_coding-TTS (FBgn0085304) 1583 FBgn0085304 FBgn0085304 FBtr0112470 CG34275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3564 chr2L 22008815 22009074 + 19 NA Intergenic Intergenic -6287 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10263 chr3R 10946076 10946130 + 19 NA intron (FBgn0261859, intron 1 of 9) protein_coding-intron (FBgn0261859, intron 1 of 9) 10411 FBgn0262315 FBgn0262315 FBtr0304477 mir-2493 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1676 chr2L 12651240 12651296 + 19 NA Intergenic Intergenic -4912 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13297 chrUextra 198511 198771 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10415 chr3R 11937092 11937389 + 19 NA Intergenic Intergenic 12302 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1628 chr2L 12294955 12295180 + 19 NA intron (FBgn0000114, intron 2 of 6) protein_coding-intron (FBgn0000114, intron 5 of 11) -43781 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3483 chr2L 21837761 21838265 + 19 NA Intergenic Intergenic 9420 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11934 chr3R 23612532 23612634 + 19 NA intron (FBgn0085382, intron 8 of 11) protein_coding-intron (FBgn0085382, intron 8 of 11) 50321 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13268 chrU 6290910 6291003 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6048 chr2R 18973668 18973751 + 19 NA promoter-TSS (FBgn0034819) protein_coding-promoter-TSS (FBgn0034819) 75 FBgn0034819 FBgn0034819 FBtr0071980 CG9877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5054 chr2R 10326216 10326439 + 19 NA intron (FBgn0261613, intron 1 of 5) protein_coding-intron (FBgn0261613, intron 1 of 5) 2923 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11685 chr3R 22490508 22490585 + 19 NA intron (FBgn0250908, intron 2 of 8) protein_coding-intron (FBgn0250908, intron 2 of 8) 8378 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7470 chr3L 9023919 9024096 + 19 NA Intergenic Intergenic -10922 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6385 chr2RHet 606260 606314 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8245 chr3L 16303782 16303836 + 19 NA exon (FBgn0052160, exon 2 of 2) ncRNA-exon (FBgn0052160, exon 2 of 2) 1769 FBgn0052160 FBgn0052160 FBtr0308930 CR32160 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7922 chr3L 13512708 13512985 + 19 NA promoter-TSS (FBgn0036377) protein_coding-promoter-TSS (FBgn0036377) -141 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_855 chr2L 6154706 6154845 + 19 NA exon (FBgn0051639, exon 2 of 3) protein_coding-exon (FBgn0051639, exon 2 of 3) 313 FBgn0051639 FBgn0051639 FBtr0079208 CG31639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7502 chr3L 9561792 9561846 + 19 NA intron (FBgn0261555, intron 2 of 9) protein_coding-intron (FBgn0261555, intron 2 of 9) 21499 FBgn0261555 FBgn0261555 FBtr0302710 CG42673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10412 chr3R 11934446 11934621 + 19 NA Intergenic Intergenic 9595 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3200 chr2L 20388763 20388885 + 19 NA intron (FBgn0032857, intron 1 of 1) protein_coding-intron (FBgn0032857, intron 1 of 1) -6469 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6562 chr2RHet 1940702 1940918 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11597 chr3R 22149944 22150030 + 19 NA TTS (FBgn0261833) protein_coding-TTS (FBgn0261833) 1010 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2888 chr2L 18372810 18372864 + 19 NA intron (FBgn0000636, intron 1 of 6) protein_coding-intron (FBgn0000636, intron 1 of 7) -5789 FBgn0085200 FBgn0085200 FBtr0305066 CG34171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8226 chr3L 16234785 16234839 + 19 NA Intergenic Intergenic 3989 FBgn0263608 FBgn0263608 FBtr0075460 l(3)72Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6397 chr2RHet 702636 702690 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7971 chr3L 13820084 13820194 + 19 NA Intergenic Intergenic -10763 FBgn0262813 FBgn0262813 FBtr0306058 CG43184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11232 chr3R 17512219 17512452 + 19 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) -14863 FBgn0259113 FBgn0259113 FBtr0084115 DNApol-alpha180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_739 chr2L 5335947 5336158 + 19 NA promoter-TSS (FBgn0031702) protein_coding-promoter-TSS (FBgn0031702) -265 FBgn0031702 FBgn0031702 FBtr0307039 fusl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_196 chr2L 1265218 1265272 + 19 NA intron (FBgn0041097, intron 1 of 11) protein_coding-intron (FBgn0041097, intron 1 of 11) 8819 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9777 chr3R 6918020 6918229 + 19 NA Intergenic Intergenic 3982 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8036 chr3L 14290427 14290481 + 19 NA intron (FBgn0001085, intron 1 of 4) protein_coding-intron (FBgn0001085, intron 1 of 4) 23011 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9643 chr3R 5886412 5886617 + 19 NA promoter-TSS (FBgn0053629) pseudogene-promoter-TSS (FBgn0053629) 495 FBgn0037783 FBgn0037783 FBtr0082176 Npc2c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11068 chr3R 16163678 16163873 + 19 NA Intergenic Intergenic -1214 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4758 chr2R 7839973 7840027 + 19 NA intron (FBgn0033668, intron 2 of 9) protein_coding-intron (FBgn0033668, intron 2 of 8) 13011 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11455 chr3R 21007724 21007794 + 19 NA intron (FBgn0083946, intron 2 of 8) protein_coding-intron (FBgn0083946, intron 2 of 8) -2346 FBgn0039286 FBgn0039286 FBtr0330288 dan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3258 chr2L 20593755 20594115 + 19 NA Intergenic Intergenic 10261 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13666 chrX 12440195 12440315 + 19 NA intron (FBgn0264542, intron 4 of 10) protein_coding-intron (FBgn0264542, intron 4 of 10) 741 FBgn0264542 FBgn0264542 FBtr0333155 CG43921 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2200 chr2L 15222135 15222248 + 19 NA Intergenic Intergenic 6969 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5572 chr2R 15005669 15005996 + 19 NA exon (FBgn0004168, exon 9 of 11) protein_coding-exon (FBgn0004168, exon 9 of 11) 8892 FBgn0034417 FBgn0034417 FBtr0100129 CG15117 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_347 chr2L 1948962 1949204 + 19 NA Intergenic Intergenic -2355 FBgn0053673 FBgn0053673 FBtr0307516 CG33673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3516 chr2L 21887734 21888091 + 19 NA Intergenic Intergenic -6315 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1545 chr2L 11488264 11488318 + 19 NA Intergenic Intergenic 3584 FBgn0263087 FBgn0263087 FBtr0307103 CG43355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9984 chr3R 8651251 8651309 + 19 NA Intergenic Intergenic -8529 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13377 chrUextra 17201025 17201087 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4413 chr2R 5255608 5255662 + 19 NA intron (FBgn0033405, intron 7 of 7) protein_coding-intron (FBgn0033405, intron 7 of 7) -5224 FBgn0040775 FBgn0040775 FBtr0088557 CG12158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4641 chr2R 7176911 7176987 + 19 NA TTS (FBgn0033610) protein_coding-TTS (FBgn0033610) 304 FBgn0033609 FBgn0033609 FBtr0088178 fbl6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12031 chr3R 24009730 24009917 + 19 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 37221 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_259 chr2L 1447714 1448083 + 19 NA Intergenic Intergenic 5172 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11674 chr3R 22465241 22465435 + 19 NA promoter-TSS (FBgn0039444) protein_coding-promoter-TSS (FBgn0039444) -410 FBgn0039444 FBgn0039444 FBtr0085035 TwdlD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5997 chr2R 18621133 18621196 + 19 NA exon (FBgn0028371, exon 2 of 16) protein_coding-exon (FBgn0028371, exon 2 of 16) 6800 FBgn0028371 FBgn0028371 FBtr0302117 jbug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2452 chr2L 16340245 16340313 + 19 NA promoter-TSS (FBgn0259151) protein_coding-promoter-TSS (FBgn0259151) 2045 FBgn0259151 FBgn0259151 FBtr0299599 CG42266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_858 chr2L 6169172 6169356 + 19 NA Intergenic Intergenic 8820 FBgn0031786 FBgn0031786 FBtr0079204 CG13989 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11534 chr3R 21858865 21858960 + 19 NA exon (FBgn0002632, exon 1 of 1) protein_coding-exon (FBgn0002632, exon 1 of 1) 279 FBgn0002632 FBgn0002632 FBtr0084959 m6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12659 chr3R 27019300 27019681 + 19 NA exon (FBgn0004389, exon 1 of 1) protein_coding-exon (FBgn0004389, exon 1 of 1) 544 FBgn0004389 FBgn0004389 FBtr0085754 bnk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6431 chr2RHet 948961 949055 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5628 chr2R 15575206 15575284 + 19 NA exon (FBgn0034467, exon 1 of 7) protein_coding-exon (FBgn0034467, exon 1 of 7) 338 FBgn0034467 FBgn0034467 FBtr0086481 CG15128 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6257 chr2R 20798037 20798237 + 19 NA exon (FBgn0085434, exon 15 of 28) protein_coding-exon (FBgn0085434, exon 15 of 28) -6685 FBgn0066084 FBgn0066084 FBtr0100231 RpL41 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1525 chr2L 11328647 11328776 + 19 NA Intergenic Intergenic 14552 FBgn0032360 FBgn0032360 FBtr0080251 CG14926 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13330 chrUextra 1489518 1489572 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4816 chr2R 8302036 8302090 + 19 NA exon (FBgn0033731, exon 2 of 2) protein_coding-exon (FBgn0033731, exon 2 of 2) 596 FBgn0033731 FBgn0033731 FBtr0087924 Cpr49Ah protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3542 chr2L 21966391 21966456 + 19 NA Intergenic Intergenic 26510 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3871 chr2LHet 191794 192091 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6412 chr2RHet 819394 819664 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5004 chr2R 9798477 9798622 + 19 NA promoter-TSS (FBgn0013733) protein_coding-promoter-TSS (FBgn0013733) -98 FBgn0013733 FBgn0013733 FBtr0304853 shot protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7506 chr3L 9592508 9592647 + 19 NA exon (FBgn0036014, exon 1 of 1) protein_coding-exon (FBgn0036014, exon 1 of 1) 489 FBgn0036014 FBgn0036014 FBtr0076379 CG3222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6505 chr2RHet 1748445 1748642 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3594 chr2L 22057865 22058291 + 19 NA Intergenic Intergenic -3833 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5068 chr2R 10481647 10481701 + 19 NA exon (FBgn0033943, exon 4 of 4) protein_coding-exon (FBgn0033943, exon 4 of 4) 2966 FBgn0033943 FBgn0033943 FBtr0087496 CG12869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12414 chr3R 25526377 25526436 + 19 NA Intergenic Intergenic 8093 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8902 chr3LHet 1379479 1379540 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12581 chr3R 26741834 26742117 + 19 NA exon (FBgn0020912, exon 2 of 5) protein_coding-exon (FBgn0020912, exon 2 of 5) 3365 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1097 chr2L 8565206 8565375 + 19 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -5598 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3309 chr2L 20856162 20856216 + 19 NA TTS (FBgn0032896) protein_coding-TTS (FBgn0032896) 1702 FBgn0032896 FBgn0032896 FBtr0081449 CG14400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8814 chr3L 24071346 24071548 + 19 NA intron (FBgn0011288, intron 1 of 6) protein_coding-intron (FBgn0011288, intron 1 of 7) 4118 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10889 chr3R 15078655 15078840 + 19 NA Intergenic Intergenic -4241 FBgn0038695 FBgn0038695 FBtr0083738 CG14280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8932 chr3LHet 2474385 2474588 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7143 chr3L 6044357 6044482 + 19 NA exon (FBgn0035665, exon 2 of 2) protein_coding-exon (FBgn0035665, exon 2 of 2) 562 FBgn0035665 FBgn0035665 FBtr0077041 Jon65Aiii protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4484 chr2R 5791578 5791653 + 19 NA promoter-TSS (FBgn0033464) protein_coding-promoter-TSS (FBgn0033464) -827 FBgn0033464 FBgn0033464 FBtr0088449 CG1441 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13602 chrX 8035854 8035953 + 19 NA TTS (FBgn0030006) protein_coding-TTS (FBgn0030006) 398 FBgn0025800 FBgn0025800 FBtr0071192 Smox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3697 chr2L 22343202 22343288 + 19 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) 2623 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6087 chr2R 19319630 19319711 + 19 NA Intergenic Intergenic -6250 FBgn0034861 FBgn0034861 FBtr0072024 CG9815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9666 chr3R 6075256 6075602 + 19 NA exon (FBgn0261928, exon 10 of 10) protein_coding-exon (FBgn0261928, exon 10 of 10) -1812 FBgn0037801 FBgn0037801 FBtr0082225 CG3999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13168 chrU 1368370 1368504 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_756 chr2L 5415533 5415740 + 19 NA exon (FBgn0016660, exon 6 of 6) protein_coding-exon (FBgn0016660, exon 6 of 6) 11294 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4871 chr2R 8797471 8797655 + 19 NA Intergenic Intergenic -5939 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11169 chr3R 16868759 16868903 + 19 NA promoter-TSS (FBgn0038847) protein_coding-promoter-TSS (FBgn0038847) -690 FBgn0013812 FBgn0013812 FBtr0273236 Dhc93AB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9842 chr3R 7532238 7532292 + 19 NA Intergenic Intergenic 2919 FBgn0025821 FBgn0025821 FBtr0082427 I-t protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2252 chr2L 15435934 15435992 + 19 NA TTS (FBgn0028892) protein_coding-TTS (FBgn0028892) 2601 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11017 chr3R 15872892 15873139 + 19 NA exon (FBgn0260466, exon 20 of 25) protein_coding-exon (FBgn0260466, exon 20 of 25) 4507 FBgn0260466 FBgn0260466 FBtr0091938 Indy-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6194 chr2R 20262727 20262819 + 19 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) 1187 FBgn0053537 FBgn0053537 FBtr0100849 tRNA:N5:60C tRNA Nup98-S2-pascual-garcia2017_R1_peak_6940 chr3L 2682234 2682426 + 19 NA exon (FBgn0264606, exon 5 of 18) protein_coding-exon (FBgn0264606, exon 5 of 18) 20708 FBgn0053234 FBgn0053234 FBtr0290142 CG33234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2289 chr2L 15550080 15550193 + 19 NA promoter-TSS (FBgn0028880) protein_coding-promoter-TSS (FBgn0028880) -274 FBgn0028880 FBgn0028880 FBtr0300847 CG15256 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3565 chr2L 22010625 22010704 + 19 NA Intergenic Intergenic -4567 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8421 chr3L 17667262 17667338 + 19 NA intron (FBgn0085280, intron 2 of 3) protein_coding-intron (FBgn0085280, intron 2 of 3) 2404 FBgn0085280 FBgn0085280 FBtr0301012 CG34251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3459 chr2L 21773720 21774187 + 19 NA exon (FBgn0051612, exon 2 of 4) protein_coding-exon (FBgn0051612, exon 2 of 4) 10112 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5818 chr2R 17155218 17155272 + 19 NA promoter-TSS (FBgn0050393) protein_coding-promoter-TSS (FBgn0050393) -161 FBgn0050393 FBgn0050393 FBtr0071620 CG30393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1260 chr2L 8884550 8884709 + 19 NA Intergenic Intergenic -6860 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12639 chr3R 26970100 26970348 + 19 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 10110 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7526 chr3L 10064594 10064840 + 19 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 17783 FBgn0036066 FBgn0036066 FBtr0076316 CG14160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5198 chr2R 11539810 11539876 + 19 NA Intergenic Intergenic -4784 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12682 chr3R 27150312 27150374 + 19 NA intron (FBgn0085376, intron 1 of 7) protein_coding-intron (FBgn0085376, intron 1 of 16) 13447 FBgn0085376 FBgn0085376 FBtr0301051 CG34347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10604 chr3R 13122458 13122541 + 19 NA Intergenic Intergenic 8989 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8696 chr3L 22370309 22370440 + 19 NA intron (FBgn0004449, intron 1 of 11) protein_coding-intron (FBgn0004449, intron 1 of 8) 30589 FBgn0004449 FBgn0004449 FBtr0330159 Ten-m protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13605 chrX 8266411 8266465 + 19 NA Intergenic Intergenic -13376 FBgn0030033 FBgn0030033 FBtr0071173 CG1387 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_936 chr2L 6887971 6888154 + 19 NA intron (FBgn0031866, intron 1 of 12) protein_coding-intron (FBgn0031866, intron 1 of 12) 13162 FBgn0031866 FBgn0031866 FBtr0079344 neuroligin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2944 chr2L 18917359 18917428 + 19 NA exon (FBgn0032723, exon 10 of 11) protein_coding-exon (FBgn0032723, exon 10 of 11) 26555 FBgn0032723 FBgn0032723 FBtr0081193 ssp3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2831 chr2L 18070369 18070508 + 19 NA TTS (FBgn0243486) protein_coding-TTS (FBgn0243486) -7831 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2073 chr2L 14754064 14754174 + 19 NA Intergenic Intergenic -6648 FBgn0028870 FBgn0028870 FBtr0080670 CG4691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10100 chr3R 9459313 9459367 + 19 NA exon (FBgn0038163, exon 7 of 9) protein_coding-exon (FBgn0038163, exon 7 of 9) 1676 FBgn0038163 FBgn0038163 FBtr0309093 CG10841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8622 chr3L 20866819 20866889 + 19 NA intron (FBgn0052432, intron 2 of 18) protein_coding-intron (FBgn0052432, intron 2 of 19) 11434 FBgn0052432 FBgn0052432 FBtr0333372 CG32432 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9912 chr3R 8089339 8089393 + 19 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) -7246 FBgn0038009 FBgn0038009 FBtr0082565 CG17738 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11929 chr3R 23598148 23598202 + 19 NA intron (FBgn0085382, intron 11 of 11) protein_coding-intron (FBgn0085382, intron 11 of 11) 35913 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6523 chr2RHet 1885831 1885899 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12543 chr3R 26524515 26524569 + 19 NA Intergenic Intergenic -1682 FBgn0000274 FBgn0000274 FBtr0085727 Pka-C2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5893 chr2R 17649332 17649386 + 19 NA Intergenic Intergenic 2140 FBgn0264715 FBgn0264715 FBtr0334050 CR43983 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13054 chrU 68196 68414 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13272 chrU 6559501 6559589 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11086 chr3R 16219487 16219618 + 19 NA exon (FBgn0262869, exon 9 of 20) protein_coding-exon (FBgn0262869, exon 9 of 20) 14016 FBgn0038795 FBgn0038795 FBtr0083894 CG4335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5632 chr2R 15613393 15613484 + 19 NA promoter-TSS (FBgn0050218) tRNA-promoter-TSS (FBgn0050218) 28 FBgn0050218 FBgn0050218 FBtr0086331 tRNA:CR30218 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13179 chrU 1591677 1591901 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9016 chr3R 929113 929167 + 19 NA Intergenic Intergenic 5760 FBgn0262605 FBgn0262605 FBtr0305279 CG43131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12527 chr3R 26329633 26329687 + 19 NA promoter-TSS (FBgn0051371) protein_coding-promoter-TSS (FBgn0051371) -578 FBgn0051371 FBgn0051371 FBtr0307535 CG31371 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_490 chr2L 3331053 3331446 + 19 NA exon (FBgn0031522, exon 2 of 6) protein_coding-exon (FBgn0031522, exon 2 of 6) 319 FBgn0031522 FBgn0031522 FBtr0077586 CG3285 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9693 chr3R 6344423 6344485 + 19 NA intron (FBgn0001235, intron 10 of 12) protein_coding-intron (FBgn0001235, intron 9 of 11) -5676 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4899 chr2R 9009773 9009827 + 19 NA exon (FBgn0033792, exon 2 of 11) protein_coding-exon (FBgn0033792, exon 2 of 11) 5990 FBgn0033792 FBgn0033792 FBtr0087722 CG13325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7113 chr3L 5827357 5827417 + 19 NA intron (FBgn0003984, intron 1 of 5) protein_coding-intron (FBgn0003984, intron 1 of 5) 11377 FBgn0003984 FBgn0003984 FBtr0077082 vn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1246 chr2L 8869835 8869919 + 19 NA Intergenic Intergenic 3110 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10369 chr3R 11689312 11689501 + 19 NA intron (FBgn0051183, intron 3 of 7) protein_coding-intron (FBgn0051183, intron 3 of 7) 3488 FBgn0038377 FBgn0038377 FBtr0083186 CG9632 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_693 chr2L 4805643 4805849 + 19 NA Intergenic Intergenic -3823 FBgn0031629 FBgn0031629 FBtr0332595 Clect27 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1307 chr2L 9054853 9054907 + 19 NA intron (FBgn0051708, intron 8 of 9) protein_coding-intron (FBgn0051708, intron 8 of 9) 16282 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8202 chr3L 16018203 16018516 + 19 NA intron (FBgn0044028, intron 1 of 3) protein_coding-intron (FBgn0044028, intron 1 of 3) 1779 FBgn0044028 FBgn0044028 FBtr0075435 Notum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10366 chr3R 11636208 11636455 + 19 NA intron (FBgn0026616, intron 1 of 4) protein_coding-intron (FBgn0026616, intron 1 of 4) 6357 FBgn0026616 FBgn0026616 FBtr0083179 alpha-Man-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7300 chr3L 7305575 7305651 + 19 NA intron (FBgn0035756, intron 1 of 12) protein_coding-intron (FBgn0035756, intron 1 of 12) 383 FBgn0035756 FBgn0035756 FBtr0290001 unc-13-4A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6524 chr2RHet 1888652 1888728 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5067 chr2R 10480792 10480846 + 19 NA exon (FBgn0033943, exon 4 of 4) protein_coding-exon (FBgn0033943, exon 4 of 4) 2111 FBgn0033943 FBgn0033943 FBtr0087496 CG12869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3023 chr2L 19363211 19363293 + 19 NA promoter-TSS (FBgn0024245) protein_coding-promoter-TSS (FBgn0024245) -28 FBgn0024245 FBgn0024245 FBtr0081224 dnt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4836 chr2R 8553417 8553522 + 19 NA promoter-TSS (FBgn0261673) protein_coding-promoter-TSS (FBgn0261673) -167 FBgn0261673 FBgn0261673 FBtr0087868 nemy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8234 chr3L 16262224 16262364 + 19 NA promoter-TSS (FBgn0036588) protein_coding-promoter-TSS (FBgn0036588) -198 FBgn0036588 FBgn0036588 FBtr0075464 CG13068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6422 chr2RHet 886916 887020 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8837 chr3L 24306528 24306688 + 19 NA Intergenic Intergenic -11359 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7156 chr3L 6129519 6129681 + 19 NA exon (FBgn0020639, exon 2 of 2) protein_coding-exon (FBgn0020639, exon 2 of 2) 291 FBgn0020639 FBgn0020639 FBtr0077057 Lcp65Af protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11174 chr3R 16927868 16927939 + 19 NA promoter-TSS (FBgn0038855) protein_coding-promoter-TSS (FBgn0038855) -18 FBgn0038855 FBgn0038855 FBtr0084008 CG5745 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1184 chr2L 8775832 8776160 + 19 NA exon (FBgn0032068, exon 2 of 5) protein_coding-exon (FBgn0032068, exon 2 of 5) 261 FBgn0032068 FBgn0032068 FBtr0079742 CG9466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4066 chr2R 2654853 2654907 + 19 NA intron (FBgn0085421, intron 7 of 15) protein_coding-intron (FBgn0085421, intron 8 of 16) 2383 FBgn0085421 FBgn0085421 FBtr0329851 Epac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4470 chr2R 5673523 5673577 + 19 NA intron (FBgn0027589, intron 2 of 8) protein_coding-intron (FBgn0027589, intron 2 of 8) -7298 FBgn0033443 FBgn0033443 FBtr0088474 CG1698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12546 chr3R 26549995 26550191 + 19 NA Intergenic Intergenic -1716 FBgn0039797 FBgn0039797 FBtr0085699 CG1340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10095 chr3R 9434608 9434872 + 19 NA promoter-TSS (FBgn0261819) protein_coding-promoter-TSS (FBgn0261819) 228 FBgn0038160 FBgn0038160 FBtr0082861 CG9759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11332 chr3R 18705889 18706303 + 19 NA Intergenic Intergenic -18928 FBgn0017590 FBgn0017590 FBtr0084337 klg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13178 chrU 1590663 1590751 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2712 chr2L 17615419 17615501 + 19 NA Intergenic Intergenic 10886 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_219 chr2L 1358219 1358436 + 19 NA TTS (FBgn0051659) protein_coding-TTS (FBgn0051659) 1463 FBgn0051659 FBgn0051659 FBtr0301010 CG31659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3679 chr2L 22291892 22292261 + 19 NA Intergenic Intergenic 42198 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5619 chr2R 15520524 15520578 + 19 NA Intergenic Intergenic -2233 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8864 chr3LHet 873771 873825 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13120 chrU 311856 311920 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4857 chr2R 8714351 8714405 + 19 NA Intergenic Intergenic 15685 FBgn0033775 FBgn0033775 FBtr0087820 Cyp9h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7633 chr3L 11002242 11002395 + 19 NA promoter-TSS (FBgn0013469) protein_coding-promoter-TSS (FBgn0013469) -385 FBgn0013469 FBgn0013469 FBtr0330080 klu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11606 chr3R 22175939 22175993 + 19 NA intron (FBgn0053970, intron 5 of 8) protein_coding-intron (FBgn0053970, intron 5 of 8) -4771 FBgn0039421 FBgn0039421 FBtr0085027 CG6036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1854 chr2L 13936441 13936542 + 19 NA intron (FBgn0032536, intron 7 of 8) protein_coding-intron (FBgn0032536, intron 7 of 8) -1801 FBgn0032538 FBgn0032538 FBtr0080558 CG16885 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4125 chr2R 3197385 3197619 + 19 NA Intergenic Intergenic -1411 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6603 chr2RHet 2141239 2141320 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3144 chr2L 20043091 20043240 + 19 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 15250 FBgn0032840 FBgn0032840 FBtr0081327 sNPF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9675 chr3R 6203850 6203904 + 19 NA promoter-TSS (FBgn0020379) protein_coding-promoter-TSS (FBgn0020379) -87 FBgn0020379 FBgn0020379 FBtr0305997 Rfx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6223 chr2R 20487367 20487433 + 19 NA promoter-TSS (FBgn0035033) protein_coding-promoter-TSS (FBgn0035033) -89 FBgn0035033 FBgn0035033 FBtr0072315 CG3548 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6561 chr2RHet 1939831 1940210 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13693 chrX 12872043 12872244 + 19 NA Intergenic Intergenic -1879 FBgn0030439 FBgn0030439 FBtr0073752 CG12716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11950 chr3R 23662258 23662312 + 19 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) -8526 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1627 chr2L 12280282 12280336 + 19 NA intron (FBgn0000114, intron 3 of 8) protein_coding-intron (FBgn0000114, intron 4 of 11) -58539 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_822 chr2L 5823935 5823990 + 19 NA promoter-TSS (FBgn0085410) protein_coding-promoter-TSS (FBgn0085410) -832 FBgn0085410 FBgn0085410 FBtr0330222 TrissinR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4951 chr2R 9423542 9423651 + 19 NA promoter-TSS (FBgn0011896) tRNA-promoter-TSS (FBgn0011896) 26 FBgn0011896 FBgn0011896 FBtr0087688 tRNA:K2:50C tRNA Nup98-S2-pascual-garcia2017_R1_peak_9599 chr3R 5287321 5287479 + 19 NA Intergenic Intergenic -2502 FBgn0037697 FBgn0037697 FBtr0082042 CG9363 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8558 chr3L 19372694 19372748 + 19 NA intron (FBgn0052206, intron 4 of 13) protein_coding-intron (FBgn0052206, intron 4 of 13) -7959 FBgn0036868 FBgn0036868 FBtr0330281 CG14087 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11921 chr3R 23573080 23573252 + 19 NA exon (FBgn0005659, exon 5 of 5) protein_coding-exon (FBgn0005659, exon 5 of 5) 10904 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1118 chr2L 8607578 8607857 + 19 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -12311 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4309 chr2R 4640877 4641088 + 19 NA exon (FBgn0027585, exon 2 of 8) protein_coding-exon (FBgn0027585, exon 2 of 8) 16107 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7498 chr3L 9502238 9502386 + 19 NA TTS (FBgn0010408) protein_coding-TTS (FBgn0010408) 371 FBgn0036008 FBgn0036008 FBtr0333863 CG3408 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_510 chr2L 3497671 3497777 + 19 NA intron (FBgn0014396, intron 14 of 15) protein_coding-intron (FBgn0014396, intron 14 of 15) -6653 FBgn0031542 FBgn0031542 FBtr0077568 CG15414 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4454 chr2R 5611185 5611382 + 19 NA intron (FBgn0259678, intron 2 of 8) protein_coding-intron (FBgn0259678, intron 2 of 7) 11454 FBgn0010316 FBgn0010316 FBtr0088469 dap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1518 chr2L 11256058 11256112 + 19 NA exon (FBgn0264442, exon 7 of 7) protein_coding-exon (FBgn0264442, exon 7 of 7) 12917 FBgn0040232 FBgn0040232 FBtr0332205 cmet protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7472 chr3L 9032072 9032183 + 19 NA Intergenic Intergenic -2802 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10193 chr3R 10250861 10251040 + 19 NA intron (FBgn0086901, intron 5 of 15) protein_coding-intron (FBgn0086901, intron 4 of 14) 6635 FBgn0085417 FBgn0085417 FBtr0301081 CG34388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4065 chr2R 2653119 2653173 + 19 NA exon (FBgn0085421, exon 11 of 17) protein_coding-exon (FBgn0085421, exon 11 of 17) 4117 FBgn0085421 FBgn0085421 FBtr0329851 Epac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7139 chr3L 6024296 6024467 + 19 NA Intergenic Intergenic 3330 FBgn0035661 FBgn0035661 FBtr0077068 CG10477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6925 chr3L 2361392 2361446 + 19 NA exon (FBgn0035332, exon 1 of 1) protein_coding-exon (FBgn0035332, exon 1 of 1) 862 FBgn0035332 FBgn0035332 FBtr0072888 CG13801 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11498 chr3R 21739459 21739633 + 19 NA TTS (FBgn0250757) protein_coding-TTS (FBgn0250757) 6794 FBgn0250757 FBgn0250757 FBtr0290137 CG42235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5919 chr2R 17888527 17888652 + 19 NA intron (FBgn0085399, intron 4 of 8) protein_coding-intron (FBgn0085399, intron 4 of 8) -14268 FBgn0050401 FBgn0050401 FBtr0071731 CG30401 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4580 chr2R 6566935 6567006 + 19 NA intron (FBgn0024836, intron 1 of 5) protein_coding-intron (FBgn0024836, intron 1 of 5) 6120 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9750 chr3R 6751402 6751524 + 19 NA Intergenic Intergenic -24543 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2018 chr2L 14559134 14559274 + 19 NA Intergenic Intergenic 4522 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4512 chr2R 6095366 6095426 + 19 NA exon (FBgn0000448, exon 9 of 9) protein_coding-exon (FBgn0000448, exon 9 of 9) -8200 FBgn0085250 FBgn0085250 FBtr0299834 CG34221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1295 chr2L 9019563 9019690 + 19 NA Intergenic Intergenic -5556 FBgn0032089 FBgn0032089 FBtr0079779 Rcd-1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9615 chr3R 5610314 5610368 + 19 NA promoter-TSS (FBgn0037754) protein_coding-promoter-TSS (FBgn0037754) -67 FBgn0037754 FBgn0037754 FBtr0082139 CG8500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13436 chrX 1377366 1377456 + 19 NA promoter-TSS (FBgn0003517) protein_coding-promoter-TSS (FBgn0003517) -358 FBgn0003517 FBgn0003517 FBtr0070291 sta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6406 chr2RHet 728955 729178 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13730 chrX 13773377 13773431 + 19 NA intron (FBgn0263115, intron 6 of 7) protein_coding-intron (FBgn0263115, intron 5 of 7) -22247 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_667 chr2L 4569702 4569756 + 19 NA intron (FBgn0053196, intron 5 of 66) protein_coding-intron (FBgn0053196, intron 5 of 46) 8472 FBgn0031613 FBgn0031613 FBtr0077444 HP6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4351 chr2R 4851257 4851311 + 19 NA TTS (FBgn0011300) protein_coding-TTS (FBgn0011300) 4403 FBgn0033358 FBgn0033358 FBtr0088671 CG8216 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9405 chr3R 3788543 3788602 + 19 NA promoter-TSS (FBgn0000504) protein_coding-promoter-TSS (FBgn0000504) 4558 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12826 chr3RHet 193749 193919 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4204 chr2R 3884765 3884903 + 19 NA exon (FBgn0027788, exon 2 of 3) protein_coding-exon (FBgn0027788, exon 2 of 3) 1244 FBgn0027788 FBgn0027788 FBtr0088869 Hey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1437 chr2L 10559417 10559484 + 19 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -7840 FBgn0032268 FBgn0032268 FBtr0080098 CG6138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11109 chr3R 16341931 16341985 + 19 NA Intergenic Intergenic -5889 FBgn0038799 FBgn0038799 FBtr0083889 CG4288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4064 chr2R 2610850 2611007 + 19 NA exon (FBgn0010482, exon 20 of 26) protein_coding-exon (FBgn0010482, exon 20 of 26) -3890 FBgn0033097 FBgn0033097 FBtr0306802 CG9430 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9844 chr3R 7540702 7540792 + 19 NA Intergenic Intergenic 3246 FBgn0037940 FBgn0037940 FBtr0082428 CG14720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3946 chr2R 824995 825401 + 19 NA Intergenic Intergenic -11974 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6815 chr3L 1269103 1269162 + 19 NA exon (FBgn0035199, exon 3 of 5) protein_coding-exon (FBgn0035199, exon 3 of 5) 3416 FBgn0035199 FBgn0035199 FBtr0072661 CG9134 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13303 chrUextra 275899 276133 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6055 chr2R 19030596 19030726 + 19 NA exon (FBgn0034827, exon 1 of 1) protein_coding-exon (FBgn0034827, exon 1 of 1) 1139 FBgn0034827 FBgn0034827 FBtr0071968 Klp59D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3847 chr2L 22905901 22906022 + 19 NA exon (FBgn0250907, exon 4 of 9) protein_coding-exon (FBgn0250907, exon 4 of 9) 12599 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3996 chr2R 1352697 1353138 + 19 NA Intergenic Intergenic 30424 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3752 chr2L 22557074 22557153 + 19 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 84631 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3409 chr2L 21582028 21582082 + 19 NA intron (FBgn0016919, intron 4 of 6) protein_coding-intron (FBgn0016919, intron 4 of 7) -4379 FBgn0260718 FBgn0260718 FBtr0331679 CR42545 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_13812 chrX 18459863 18460040 + 19 NA promoter-TSS (FBgn0000242) protein_coding-promoter-TSS (FBgn0000242) 154 FBgn0052546 FBgn0052546 FBtr0074600 tRNA:CR32546 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4316 chr2R 4654799 4654853 + 19 NA Intergenic Intergenic -25312 FBgn0033330 FBgn0033330 FBtr0088714 CG8746 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7319 chr3L 7540842 7540896 + 19 NA Intergenic Intergenic -5312 FBgn0052376 FBgn0052376 FBtr0076827 CG32376 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6425 chr2RHet 927282 927337 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1529 chr2L 11351994 11352063 + 19 NA Intergenic Intergenic -6845 FBgn0000287 FBgn0000287 FBtr0080236 salr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_765 chr2L 5477018 5477138 + 19 NA Intergenic Intergenic 15437 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3930 chr2R 608028 608109 + 19 NA intron (FBgn0026401, intron 9 of 23) protein_coding-intron (FBgn0026401, intron 8 of 22) 8447 FBgn0026401 FBgn0026401 FBtr0111118 Nipped-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11971 chr3R 23800341 23800555 + 19 NA intron (FBgn0003890, intron 1 of 6) protein_coding-intron (FBgn0003890, intron 1 of 7) 11310 FBgn0039566 FBgn0039566 FBtr0085257 CG4849 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9753 chr3R 6759617 6759745 + 19 NA Intergenic Intergenic -16325 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_814 chr2L 5788390 5788475 + 19 NA intron (FBgn0031738, intron 2 of 7) protein_coding-intron (FBgn0031738, intron 2 of 7) 4401 FBgn0051913 FBgn0051913 FBtr0079138 CG31913 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12605 chr3R 26817681 26818006 + 19 NA exon (FBgn0051007, exon 1 of 1) protein_coding-exon (FBgn0051007, exon 1 of 1) 336 FBgn0051007 FBgn0051007 FBtr0085747 CG31007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6091 chr2R 19356066 19356121 + 19 NA intron (FBgn0264339, intron 3 of 13) protein_coding-intron (FBgn0264339, intron 3 of 13) 3205 FBgn0034865 FBgn0034865 FBtr0072021 Or59b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1942 chr2L 14334097 14334169 + 19 NA promoter-TSS (FBgn0028916) protein_coding-promoter-TSS (FBgn0028916) -27 FBgn0028916 FBgn0028916 FBtr0080624 CG33090 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11958 chr3R 23682238 23682406 + 19 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) 10650 FBgn0039551 FBgn0039551 FBtr0085226 Or98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4950 chr2R 9420389 9420514 + 19 NA promoter-TSS (FBgn0260964) protein_coding-promoter-TSS (FBgn0260964) 1459 FBgn0260964 FBgn0260964 FBtr0091492 Vmat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_271 chr2L 1468437 1468638 + 19 NA Intergenic Intergenic -23758 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7381 chr3L 8248022 8248076 + 19 NA exon (FBgn0263219, exon 3 of 32) protein_coding-exon (FBgn0263219, exon 3 of 32) 13818 FBgn0263219 FBgn0263219 FBtr0333590 Dscam4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4715 chr2R 7649550 7649604 + 19 NA Intergenic Intergenic -6381 FBgn0033650 FBgn0033650 FBtr0088029 CG13193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1472 chr2L 10815873 10816160 + 19 NA intron (FBgn0011676, intron 11 of 14) protein_coding-intron (FBgn0011676, intron 11 of 18) -3107 FBgn0032303 FBgn0032303 FBtr0080139 CG6508 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4878 chr2R 8858147 8858201 + 19 NA intron (FBgn0005624, intron 3 of 4) protein_coding-intron (FBgn0005624, intron 3 of 4) 10320 FBgn0005624 FBgn0005624 FBtr0087798 Psc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_661 chr2L 4523861 4524008 + 19 NA exon (FBgn0053196, exon 30 of 47) protein_coding-exon (FBgn0053196, exon 30 of 47) -46910 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9702 chr3R 6390366 6390420 + 19 NA intron (FBgn0001235, intron 5 of 12) protein_coding-intron (FBgn0001235, intron 5 of 11) 40999 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4107 chr2R 3053308 3053371 + 19 NA intron (FBgn0003090, intron 1 of 5) protein_coding-intron (FBgn0003090, intron 1 of 5) -7606 FBgn0002930 FBgn0002930 FBtr0089052 nec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3729 chr2L 22483844 22484490 + 19 NA Intergenic Intergenic 11685 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10654 chr3R 13461961 13462015 + 19 NA Intergenic Intergenic 4587 FBgn0051573 FBgn0051573 FBtr0083472 tRNA:CR31573 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10955 chr3R 15498032 15498086 + 19 NA promoter-TSS (FBgn0012003) tRNA-promoter-TSS (FBgn0012003) 12 FBgn0012003 FBgn0012003 FBtr0083799 tRNA:V3b:92Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_5294 chr2R 12403603 12403657 + 19 NA promoter-TSS (FBgn0011260) protein_coding-promoter-TSS (FBgn0011260) -930 FBgn0011260 FBgn0011260 FBtr0087091 Sema-2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10875 chr3R 14950462 14950635 + 19 NA exon (FBgn0038679, exon 3 of 8) protein_coding-exon (FBgn0038679, exon 3 of 8) 826 FBgn0038679 FBgn0038679 FBtr0304715 CG6040 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8507 chr3L 18409975 18410230 + 19 NA Intergenic Intergenic -18567 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12410 chr3R 25523770 25524012 + 19 NA Intergenic Intergenic 5578 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1160 chr2L 8741031 8741154 + 19 NA promoter-TSS (FBgn0003209) protein_coding-promoter-TSS (FBgn0003209) -432 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13009 chr4 1020929 1021329 + 19 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 10778 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_338 chr2L 1858856 1858999 + 19 NA TTS (FBgn0051665) protein_coding-TTS (FBgn0051665) -10940 FBgn0031372 FBgn0031372 FBtr0077891 CG7295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2434 chr2L 16203929 16203983 + 19 NA Intergenic Intergenic -7503 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2439 chr2L 16216460 16216563 + 19 NA exon (FBgn0264392, exon 2 of 2) ncRNA-exon (FBgn0264392, exon 2 of 2) 533 FBgn0264392 FBgn0264392 FBtr0332359 CR43840 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3233 chr2L 20525601 20525817 + 19 NA Intergenic Intergenic 30603 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9860 chr3R 7664929 7665080 + 19 NA intron (FBgn0037956, intron 1 of 2) protein_coding-intron (FBgn0037956, intron 1 of 2) -17049 FBgn0037955 FBgn0037955 FBtr0082521 CG6950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10710 chr3R 13835976 13836030 + 19 NA exon (FBgn0263995, exon 9 of 12) protein_coding-exon (FBgn0263995, exon 9 of 12) -9094 FBgn0000477 FBgn0000477 FBtr0083538 DNaseII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9182 chr3R 2327520 2327603 + 19 NA Intergenic Intergenic -5728 FBgn0011919 FBgn0011919 FBtr0081706 tRNA:M2:83F tRNA Nup98-S2-pascual-garcia2017_R1_peak_5706 chr2R 16108554 16108616 + 19 NA Intergenic Intergenic -8401 FBgn0011869 FBgn0011869 FBtr0086312 tRNA:G3:56EFa tRNA Nup98-S2-pascual-garcia2017_R1_peak_786 chr2L 5601297 5601380 + 19 NA Intergenic Intergenic 4505 FBgn0031724 FBgn0031724 FBtr0079109 CG18266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13061 chrU 79584 80697 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8205 chr3L 16022851 16023078 + 19 NA exon (FBgn0044028, exon 3 of 4) protein_coding-exon (FBgn0044028, exon 3 of 4) -1384 FBgn0263570 FBgn0263570 FBtr0309724 mir-4941 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_9186 chr3R 2348478 2348535 + 19 NA Intergenic Intergenic -4745 FBgn0037449 FBgn0037449 FBtr0081675 CG15185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3704 chr2L 22357205 22357484 + 19 NA intron (FBgn0039972, intron 3 of 8) protein_coding-intron (FBgn0039972, intron 1 of 6) 2989 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13013 chr4 1024848 1025163 + 19 NA exon (FBgn0019650, exon 6 of 9) protein_coding-exon (FBgn0019650, exon 6 of 9) 14654 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13160 chrU 1257387 1257441 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10077 chr3R 9328219 9328389 + 19 NA Intergenic Intergenic 20953 FBgn0038157 FBgn0038157 FBtr0082791 CG12538 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11349 chr3R 19026896 19026950 + 19 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) 2833 FBgn0011596 FBgn0011596 FBtr0084399 fzo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5559 chr2R 14916396 14916602 + 19 NA exon (FBgn0263116, exon 2 of 9) protein_coding-exon (FBgn0263116, exon 2 of 9) -1015 FBgn0263083 FBgn0263083 FBtr0307099 CG43351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10321 chr3R 11394003 11394312 + 19 NA Intergenic Intergenic -15663 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10859 chr3R 14797572 14797856 + 19 NA exon (FBgn0261262, exon 14 of 19) protein_coding-exon (FBgn0261262, exon 14 of 19) 6817 FBgn0038665 FBgn0038665 FBtr0304691 CG12269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12980 chr4 937101 937181 + 19 NA intron (FBgn0023213, intron 12 of 15) protein_coding-intron (FBgn0023213, intron 12 of 15) 9325 FBgn0263093 FBgn0263093 FBtr0307112 CR43361 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4023 chr2R 1841811 1841891 + 19 NA Intergenic Intergenic -3509 FBgn0033047 FBgn0033047 FBtr0085966 CG7882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12658 chr3R 27015429 27015485 + 19 NA intron (FBgn0051004, intron 4 of 14) protein_coding-intron (FBgn0051004, intron 4 of 15) -3489 FBgn0004389 FBgn0004389 FBtr0085754 bnk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12514 chr3R 26174649 26174874 + 19 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) 38580 FBgn0015222 FBgn0015222 FBtr0332170 Fer1HCH protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10016 chr3R 8871328 8871524 + 19 NA exon (FBgn0001217, exon 2 of 2) protein_coding-exon (FBgn0001217, exon 2 of 2) 945 FBgn0001217 FBgn0001217 FBtr0082707 Hsc70-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_653 chr2L 4496972 4497026 + 19 NA exon (FBgn0053196, exon 69 of 82) protein_coding-exon (FBgn0053196, exon 69 of 82) -19975 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13524 chrX 4021790 4021852 + 19 NA exon (FBgn0026083, exon 6 of 6) protein_coding-exon (FBgn0026083, exon 6 of 6) -3429 FBgn0066114 FBgn0066114 FBtr0070644 GlcAT-I protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11754 chr3R 22855525 22855585 + 19 NA exon (FBgn0004842, exon 3 of 8) protein_coding-exon (FBgn0004842, exon 3 of 8) -3724 FBgn0039476 FBgn0039476 FBtr0085149 CG6271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8887 chr3LHet 1167866 1167920 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13237 chrU 3230742 3230994 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11138 chr3R 16574155 16574229 + 19 NA exon (FBgn0017557, exon 1 of 1) protein_coding-exon (FBgn0017557, exon 1 of 1) 604 FBgn0017557 FBgn0017557 FBtr0083928 Pros28.1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10044 chr3R 9113789 9113966 + 19 NA exon (FBgn0038132, exon 2 of 2) protein_coding-exon (FBgn0038132, exon 2 of 2) 655 FBgn0038132 FBgn0038132 FBtr0082776 CG15887 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7393 chr3L 8353975 8354029 + 19 NA promoter-TSS (FBgn0001248) protein_coding-promoter-TSS (FBgn0001248) -1962 FBgn0001248 FBgn0001248 FBtr0076671 Idh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11980 chr3R 23830244 23830315 + 19 NA Intergenic Intergenic -13806 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8823 chr3L 24120500 24120609 + 19 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 53225 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12025 chr3R 23984198 23984252 + 19 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 11623 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7768 chr3L 12333502 12333630 + 19 NA exon (FBgn0036278, exon 6 of 6) protein_coding-exon (FBgn0036278, exon 6 of 6) 3790 FBgn0036277 FBgn0036277 FBtr0075954 CG10418 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7515 chr3L 9873333 9873387 + 19 NA exon (FBgn0085411, exon 2 of 4) protein_coding-exon (FBgn0085411, exon 2 of 4) 1275 FBgn0085411 FBgn0085411 FBtr0332687 CG34382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6858 chr3L 1695329 1695456 + 19 NA exon (FBgn0035257, exon 2 of 2) protein_coding-exon (FBgn0035257, exon 2 of 2) 775 FBgn0035257 FBgn0035257 FBtr0072764 CG12011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1562 chr2L 11686886 11686966 + 19 NA Intergenic Intergenic -7930 FBgn0032372 FBgn0032372 FBtr0080254 CG4988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12330 chr3R 25263230 25263475 + 19 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -42068 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8729 chr3L 23392226 23392439 + 19 NA Intergenic Intergenic 59906 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2781 chr2L 17896813 17897010 + 19 NA Intergenic Intergenic 3099 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8855 chr3LHet 629267 629358 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9794 chr3R 7092545 7092620 + 19 NA Intergenic Intergenic -10737 FBgn0262972 FBgn0262972 FBtr0306728 CR43283 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11911 chr3R 23494967 23495115 + 19 NA exon (FBgn0039536, exon 17 of 29) protein_coding-exon (FBgn0039536, exon 17 of 29) 6880 FBgn0039536 FBgn0039536 FBtr0330112 CG18437 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9245 chr3R 2677136 2677215 + 19 NA Intergenic Intergenic -1472 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8369 chr3L 17278635 17278877 + 19 NA Intergenic Intergenic 21240 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2727 chr2L 17697995 17698188 + 19 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -6590 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11710 chr3R 22561397 22561461 + 19 NA exon (FBgn0039453, exon 2 of 2) protein_coding-exon (FBgn0039453, exon 2 of 2) 589 FBgn0039453 FBgn0039453 FBtr0085044 CG6403 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11908 chr3R 23492685 23492896 + 19 NA intron (FBgn0039536, intron 12 of 29) protein_coding-intron (FBgn0039536, intron 11 of 28) 4629 FBgn0039536 FBgn0039536 FBtr0330112 CG18437 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12739 chr3R 27388261 27388327 + 19 NA intron (FBgn0039852, intron 8 of 8) protein_coding-intron (FBgn0039852, intron 8 of 8) -9571 FBgn0028968 FBgn0028968 FBtr0330096 gammaCop protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7027 chr3L 4187785 4187839 + 19 NA promoter-TSS (FBgn0003710) protein_coding-promoter-TSS (FBgn0003710) 211 FBgn0035505 FBgn0035505 FBtr0300621 Teh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1867 chr2L 14010581 14010646 + 19 NA promoter-TSS (FBgn0028909) tRNA-promoter-TSS (FBgn0028909) 23 FBgn0028909 FBgn0028909 FBtr0080609 tRNA:Q:34E tRNA Nup98-S2-pascual-garcia2017_R1_peak_8109 chr3L 15036229 15036319 + 19 NA promoter-TSS (FBgn0036465) protein_coding-promoter-TSS (FBgn0036465) -604 FBgn0036465 FBgn0036465 FBtr0075669 Rpn12R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11188 chr3R 17118318 17118378 + 19 NA intron (FBgn0038880, intron 1 of 5) protein_coding-intron (FBgn0038880, intron 1 of 5) 1372 FBgn0038880 FBgn0038880 FBtr0084099 SIFR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12850 chr3RHet 819510 819577 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8159 chr3L 15635178 15635298 + 19 NA intron (FBgn0259236, intron 1 of 1) protein_coding-intron (FBgn0259236, intron 1 of 1) -6433 FBgn0262529 FBgn0262529 FBtr0304969 CG43083 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2195 chr2L 15208413 15208506 + 19 NA Intergenic Intergenic 6200 FBgn0263089 FBgn0263089 FBtr0307107 CR43357 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13682 chrX 12746356 12746410 + 19 NA intron (FBgn0259171, intron 2 of 9) protein_coding-intron (FBgn0259171, intron 2 of 9) 5372 FBgn0030429 FBgn0030429 FBtr0073699 CG4661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12616 chr3R 26858747 26858894 + 19 NA Intergenic Intergenic -2248 FBgn0053773 FBgn0053773 FBtr0091774 CG33773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8866 chr3LHet 876190 876244 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5554 chr2R 14893877 14893938 + 19 NA exon (FBgn0034412, exon 9 of 13) protein_coding-exon (FBgn0034412, exon 9 of 13) 11706 FBgn0263473 FBgn0263473 FBtr0309772 snoRNA:abba-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1149 chr2L 8656446 8656501 + 19 NA exon (FBgn0011259, exon 12 of 22) protein_coding-exon (FBgn0011259, exon 12 of 22) -16679 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_838 chr2L 5940299 5940375 + 19 NA Intergenic Intergenic 2926 FBgn0261055 FBgn0261055 FBtr0301935 Sfp26Ad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11450 chr3R 20930293 20930450 + 19 NA exon (FBgn0054027, exon 12 of 15) protein_coding-exon (FBgn0054027, exon 12 of 15) 4383 FBgn0054027 FBgn0054027 FBtr0100082 CG34027 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13305 chrUextra 308006 308060 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1180 chr2L 8769776 8769833 + 19 NA exon (FBgn0032067, exon 5 of 5) protein_coding-exon (FBgn0032067, exon 5 of 5) -1096 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7835 chr3L 12808121 12808228 + 19 NA intron (FBgn0260965, intron 1 of 10) protein_coding-intron (FBgn0260965, intron 1 of 9) 820 FBgn0260965 FBgn0260965 FBtr0304053 CG42588 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3130 chr2L 19969768 19970170 + 19 NA exon (FBgn0264443, exon 6 of 6) protein_coding-exon (FBgn0264443, exon 6 of 6) -2284 FBgn0014000 FBgn0014000 FBtr0081306 Hf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8403 chr3L 17581853 17581914 + 19 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -22621 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6664 chr2RHet 2444566 2444658 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13464 chrX 1553254 1553315 + 19 NA exon (FBgn0000210, exon 8 of 8) protein_coding-exon (FBgn0000210, exon 8 of 8) -5804 FBgn0000482 FBgn0000482 FBtr0070269 dor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5192 chr2R 11488787 11488845 + 19 NA Intergenic Intergenic -12791 FBgn0260429 FBgn0260429 FBtr0304712 CG42524 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12333 chr3R 25275985 25276122 + 19 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -29367 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5464 chr2R 14090918 14091177 + 19 NA Intergenic Intergenic -4213 FBgn0050114 FBgn0050114 FBtr0086753 CG30114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6531 chr2RHet 1900026 1900294 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7152 chr3L 6107379 6107433 + 19 NA exon (FBgn0005658, exon 6 of 10) protein_coding-exon (FBgn0005658, exon 6 of 10) 2839 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11868 chr3R 23322202 23322256 + 19 NA Intergenic Intergenic 5518 FBgn0262613 FBgn0262613 FBtr0305290 CG43139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11106 chr3R 16323706 16323790 + 19 NA Intergenic Intergenic 3900 FBgn0038797 FBgn0038797 FBtr0083892 Dic2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11256 chr3R 17626464 17626518 + 19 NA intron (FBgn0013759, intron 8 of 17) protein_coding-intron (FBgn0013759, intron 8 of 17) -2213 FBgn0263521 FBgn0263521 FBtr0309593 mir-4969 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13045 chrU 41249 41309 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5056 chr2R 10337184 10337246 + 19 NA intron (FBgn0261613, intron 3 of 5) protein_coding-intron (FBgn0261613, intron 3 of 5) 13811 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6669 chr2RHet 2588786 2589259 + 19 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2618 chr2L 17162147 17162254 + 19 NA intron (FBgn0032627, intron 3 of 5) protein_coding-intron (FBgn0032627, intron 3 of 5) -9212 FBgn0083942 FBgn0083942 FBtr0110785 CG34106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1837 chr2L 13759231 13759428 + 18 NA Intergenic Intergenic -11505 FBgn0262332 FBgn0262332 FBtr0304513 mir-968 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3896 chr2R 119020 119077 + 18 NA Intergenic Intergenic 11396 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13307 chrUextra 360218 360407 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4985 chr2R 9672082 9672273 + 18 NA TTS (FBgn0264358) ncRNA-TTS (FBgn0264358) 677 FBgn0264358 FBgn0264358 FBtr0332253 CR43810 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4529 chr2R 6213780 6214070 + 18 NA exon (FBgn0261698, exon 25 of 29) protein_coding-exon (FBgn0261698, exon 25 of 29) -5920 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6148 chr2R 19889623 19889691 + 18 NA exon (FBgn0053519, exon 22 of 35) protein_coding-exon (FBgn0053519, exon 22 of 35) -7084 FBgn0034951 FBgn0034951 FBtr0072201 CG3860 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11554 chr3R 21957146 21957200 + 18 NA TTS (FBgn0051324) protein_coding-TTS (FBgn0051324) -1703 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7178 chr3L 6305765 6305988 + 18 NA Intergenic Intergenic -7835 FBgn0041625 FBgn0041625 FBtr0077004 Or65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7618 chr3L 10883480 10883672 + 18 NA exon (FBgn0036108, exon 2 of 2) protein_coding-exon (FBgn0036108, exon 2 of 2) 486 FBgn0036108 FBgn0036108 FBtr0076191 Cpr67Fa1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3690 chr2L 22326353 22326471 + 18 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -14210 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7375 chr3L 8213032 8213184 + 18 NA Intergenic Intergenic -1025 FBgn0035858 FBgn0035858 FBtr0333624 CG13674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11926 chr3R 23587856 23587999 + 18 NA Intergenic Intergenic 25665 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11090 chr3R 16241235 16241480 + 18 NA intron (FBgn0262869, intron 3 of 20) protein_coding-intron (FBgn0262869, intron 2 of 19) 7370 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13085 chrU 173589 173651 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1610 chr2L 12138355 12138492 + 18 NA exon (FBgn0032416, exon 2 of 5) protein_coding-exon (FBgn0032416, exon 2 of 5) 415 FBgn0032416 FBgn0032416 FBtr0080337 Gr33a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6877 chr3L 1916713 1916767 + 18 NA Intergenic Intergenic -4567 FBgn0261723 FBgn0261723 FBtr0290136 Dbx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1697 chr2L 12748273 12748478 + 18 NA Intergenic Intergenic 13465 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3953 chr2R 835413 835598 + 18 NA Intergenic Intergenic -1667 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11329 chr3R 18680747 18680801 + 18 NA Intergenic Intergenic -3248 FBgn0264428 FBgn0264428 FBtr0332548 CR43846 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11666 chr3R 22440505 22440777 + 18 NA Intergenic Intergenic -4204 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13002 chr4 1010186 1010316 + 18 NA promoter-TSS (FBgn0019650) protein_coding-promoter-TSS (FBgn0019650) -100 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12954 chr4 655600 655709 + 18 NA exon (FBgn0039915, exon 10 of 10) protein_coding-exon (FBgn0039915, exon 10 of 10) 5335 FBgn0039915 FBgn0039915 FBtr0089972 CG1732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10554 chr3R 12739327 12739553 + 18 NA intron (FBgn0263610, intron 1 of 7) ncRNA-intron (FBgn0263610, intron 1 of 7) 9515 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3802 chr2L 22683380 22683555 + 18 NA Intergenic Intergenic 7541 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10853 chr3R 14762409 14762463 + 18 NA intron (FBgn0261262, intron 2 of 17) protein_coding-intron (FBgn0261262, intron 2 of 18) 7518 FBgn0261262 FBgn0261262 FBtr0304686 CG42613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3332 chr2L 21063225 21063316 + 18 NA intron (FBgn0032910, intron 1 of 7) protein_coding-intron (FBgn0032910, intron 1 of 7) 7011 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11236 chr3R 17520394 17520584 + 18 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) -23017 FBgn0259113 FBgn0259113 FBtr0084115 DNApol-alpha180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4196 chr2R 3768102 3768167 + 18 NA intron (FBgn0085390, intron 2 of 19) protein_coding-intron (FBgn0085390, intron 2 of 20) 5353 FBgn0085390 FBgn0085390 FBtr0308590 Dgk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2980 chr2L 19209163 19209225 + 18 NA TTS (FBgn0015380) protein_coding-TTS (FBgn0015380) 18848 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6010 chr2R 18752888 18753124 + 18 NA Intergenic Intergenic -1038 FBgn0004896 FBgn0004896 FBtr0071898 fd59A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8342 chr3L 17152859 17152913 + 18 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -7077 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6262 chr2R 20820794 20820915 + 18 NA intron (FBgn0043792, intron 3 of 6) protein_coding-intron (FBgn0043792, intron 3 of 7) 3004 FBgn0043792 FBgn0043792 FBtr0072416 CG30427 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10449 chr3R 12187941 12188013 + 18 NA exon (FBgn0038422, exon 3 of 5) protein_coding-exon (FBgn0038422, exon 3 of 5) -2147 FBgn0259917 FBgn0259917 FBtr0300198 CG42446 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7046 chr3L 4447291 4447359 + 18 NA exon (FBgn0035545, exon 2 of 3) protein_coding-exon (FBgn0035545, exon 2 of 3) 752 FBgn0035545 FBgn0035545 FBtr0333964 CG12607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13429 chrX 1282341 1282552 + 18 NA promoter-TSS (FBgn0052813) protein_coding-promoter-TSS (FBgn0052813) -157 FBgn0052813 FBgn0052813 FBtr0330320 CG32813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12810 chr3R 27820179 27820388 + 18 NA Intergenic Intergenic 7712 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9627 chr3R 5693233 5693474 + 18 NA intron (FBgn0037766, intron 1 of 2) protein_coding-intron (FBgn0037766, intron 1 of 2) 489 FBgn0037766 FBgn0037766 FBtr0330082 Teh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7674 chr3L 11675020 11675151 + 18 NA promoter-TSS (FBgn0015828) protein_coding-promoter-TSS (FBgn0015828) -53 FBgn0015828 FBgn0015828 FBtr0076108 TfIIEalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3783 chr2L 22619799 22619853 + 18 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 24701 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7961 chr3L 13753839 13753917 + 18 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 42622 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12726 chr3R 27352895 27353086 + 18 NA Intergenic Intergenic -15895 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6922 chr3L 2328824 2328890 + 18 NA intron (FBgn0035331, intron 2 of 4) protein_coding-intron (FBgn0035331, intron 2 of 4) 6164 FBgn0035331 FBgn0035331 FBtr0330187 DmsR-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9361 chr3R 3430214 3430268 + 18 NA intron (FBgn0083963, intron 2 of 12) protein_coding-intron (FBgn0083963, intron 2 of 12) 34915 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1178 chr2L 8765983 8766064 + 18 NA exon (FBgn0032066, exon 5 of 5) protein_coding-exon (FBgn0032066, exon 5 of 5) 2685 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9172 chr3R 2291866 2292086 + 18 NA Intergenic Intergenic -2158 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6140 chr2R 19723355 19723470 + 18 NA exon (FBgn0034911, exon 9 of 9) protein_coding-exon (FBgn0034911, exon 9 of 9) 4175 FBgn0086659 FBgn0086659 FBtr0091917 snoRNA:Psi18S-176 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2088 chr2L 14796615 14796669 + 18 NA promoter-TSS (FBgn0028866) protein_coding-promoter-TSS (FBgn0028866) -105 FBgn0028866 FBgn0028866 FBtr0080687 CG18420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3229 chr2L 20517313 20517689 + 18 NA Intergenic Intergenic 22395 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10612 chr3R 13180327 13180381 + 18 NA intron (FBgn0038498, intron 1 of 6) protein_coding-intron (FBgn0038498, intron 1 of 6) 11485 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2668 chr2L 17345977 17346155 + 18 NA Intergenic Intergenic 8602 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10499 chr3R 12421980 12422034 + 18 NA TTS (FBgn0027562) protein_coding-TTS (FBgn0027562) 1871 FBgn0038447 FBgn0038447 FBtr0083327 CG14892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1065 chr2L 8332050 8332104 + 18 NA intron (FBgn0032022, intron 2 of 2) protein_coding-intron (FBgn0032022, intron 2 of 2) 3029 FBgn0032022 FBgn0032022 FBtr0079603 CG14275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4946 chr2R 9382362 9382436 + 18 NA promoter-TSS (FBgn0033844) protein_coding-promoter-TSS (FBgn0033844) -32 FBgn0033844 FBgn0033844 FBtr0332927 bbc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_56 chr2L 715690 715779 + 18 NA promoter-TSS (FBgn0000497) protein_coding-promoter-TSS (FBgn0000497) -766 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4378 chr2R 4951742 4951948 + 18 NA Intergenic Intergenic -2416 FBgn0033369 FBgn0033369 FBtr0088661 CG8197 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11964 chr3R 23728680 23728734 + 18 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 2858 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7522 chr3L 9996854 9997093 + 18 NA exon (FBgn0040823, exon 2 of 6) protein_coding-exon (FBgn0040823, exon 2 of 6) 29222 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4511 chr2R 6085303 6085491 + 18 NA exon (FBgn0085250, exon 3 of 3) protein_coding-exon (FBgn0085250, exon 3 of 3) 1799 FBgn0085250 FBgn0085250 FBtr0299834 CG34221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5042 chr2R 10220312 10220415 + 18 NA exon (FBgn0085408, exon 1 of 4) protein_coding-exon (FBgn0085408, exon 1 of 4) 463 FBgn0085408 FBgn0085408 FBtr0112616 Shroom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_348 chr2L 1952380 1952470 + 18 NA exon (FBgn0031375, exon 2 of 2) protein_coding-exon (FBgn0031375, exon 2 of 2) 2094 FBgn0031375 FBgn0031375 FBtr0330202 erm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12905 chr4 69949 70194 + 18 NA exon (FBgn0004859, exon 6 of 6) protein_coding-exon (FBgn0004859, exon 6 of 6) -5667 FBgn0025740 FBgn0025740 FBtr0089179 plexB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6986 chr3L 3264252 3264441 + 18 NA intron (FBgn0035427, intron 2 of 5) protein_coding-intron (FBgn0035427, intron 1 of 4) -4149 FBgn0085294 FBgn0085294 FBtr0331459 CG34265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5124 chr2R 10898869 10898938 + 18 NA promoter-TSS (FBgn0029082) protein_coding-promoter-TSS (FBgn0029082) 0 FBgn0029082 FBgn0029082 FBtr0087414 hbs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6529 chr2RHet 1893986 1894190 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12608 chr3R 26825925 26825992 + 18 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) -7779 FBgn0051007 FBgn0051007 FBtr0085747 CG31007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12713 chr3R 27275568 27275776 + 18 NA intron (FBgn0261988, intron 3 of 12) protein_coding-intron (FBgn0261988, intron 3 of 12) 9919 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1335 chr2L 9361207 9361323 + 18 NA Intergenic Intergenic -3032 FBgn0263323 FBgn0263323 FBtr0308747 CG43404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6867 chr3L 1828100 1828154 + 18 NA intron (FBgn0035279, intron 1 of 2) protein_coding-intron (FBgn0035279, intron 1 of 2) 815 FBgn0035279 FBgn0035279 FBtr0299561 Cpr62Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_607 chr2L 4239526 4239603 + 18 NA Intergenic Intergenic 11922 FBgn0003941 FBgn0003941 FBtr0077470 RpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7798 chr3L 12584111 12584169 + 18 NA intron (FBgn0015904, intron 3 of 4) protein_coding-intron (FBgn0015904, intron 3 of 4) 10368 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12995 chr4 968337 968503 + 18 NA TTS (FBgn0019985) protein_coding-TTS (FBgn0019985) 10598 FBgn0052016 FBgn0052016 FBtr0089233 CG32016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2134 chr2L 14962937 14962991 + 18 NA exon (FBgn0259213, exon 2 of 20) protein_coding-exon (FBgn0259213, exon 2 of 20) 9336 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3155 chr2L 20116829 20116885 + 18 NA Intergenic Intergenic -12767 FBgn0032851 FBgn0032851 FBtr0089388 CG13970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_674 chr2L 4640986 4641040 + 18 NA promoter-TSS (FBgn0083938) protein_coding-promoter-TSS (FBgn0083938) -283 FBgn0083938 FBgn0083938 FBtr0110769 BG642163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8191 chr3L 16004555 16004656 + 18 NA exon (FBgn0263601, exon 1 of 4) protein_coding-exon (FBgn0263601, exon 1 of 4) -1196 FBgn0263601 FBgn0263601 FBtr0333578 mib1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5580 chr2R 15135189 15135243 + 18 NA Intergenic Intergenic -2050 FBgn0004003 FBgn0004003 FBtr0086510 wbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6881 chr3L 1953502 1953556 + 18 NA exon (FBgn0262110, exon 14 of 18) protein_coding-exon (FBgn0262110, exon 14 of 18) 5774 FBgn0035295 FBgn0035295 FBtr0333430 Cnb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12818 chr3R 27853296 27853361 + 18 NA Intergenic Intergenic -10767 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5041 chr2R 10217698 10217958 + 18 NA intron (FBgn0085408, intron 7 of 9) protein_coding-intron (FBgn0085408, intron 7 of 9) -2072 FBgn0085408 FBgn0085408 FBtr0112616 Shroom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5652 chr2R 15774205 15774386 + 18 NA Intergenic Intergenic -5870 FBgn0034477 FBgn0034477 FBtr0086341 CG13872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2649 chr2L 17269727 17269828 + 18 NA Intergenic Intergenic -9045 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6549 chr2RHet 1921510 1921607 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9428 chr3R 3975030 3975084 + 18 NA exon (FBgn0001138, exon 8 of 9) protein_coding-exon (FBgn0001138, exon 8 of 9) -8293 FBgn0011959 FBgn0011959 FBtr0081809 tRNA:R2:84Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_6154 chr2R 20007610 20007833 + 18 NA exon (FBgn0034978, exon 3 of 7) protein_coding-exon (FBgn0034978, exon 3 of 7) 3426 FBgn0034978 FBgn0034978 FBtr0305506 CG3257 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9577 chr3R 5141244 5141408 + 18 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -6166 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_711 chr2L 4925861 4925993 + 18 NA exon (FBgn0041150, exon 2 of 11) protein_coding-exon (FBgn0041150, exon 2 of 11) -10431 FBgn0041150 FBgn0041150 FBtr0310622 hoe1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10020 chr3R 8896311 8896513 + 18 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 12931 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7928 chr3L 13550003 13550251 + 18 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -37422 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8765 chr3L 23659276 23659427 + 18 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -49040 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_123 chr2L 942423 942487 + 18 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 19662 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8746 chr3L 23549813 23549897 + 18 NA intron (FBgn0250816, intron 1 of 6) protein_coding-intron (FBgn0250816, intron 1 of 7) 830 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5048 chr2R 10294178 10294341 + 18 NA Intergenic Intergenic 4818 FBgn0033934 FBgn0033934 FBtr0087517 CG17385 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5608 chr2R 15462342 15462412 + 18 NA intron (FBgn0003435, intron 2 of 8) protein_coding-intron (FBgn0003435, intron 3 of 9) -8705 FBgn0003435 FBgn0003435 FBtr0301610 sm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3419 chr2L 21641432 21641824 + 18 NA intron (FBgn0023416, intron 16 of 18) protein_coding-intron (FBgn0023416, intron 16 of 18) 9041 FBgn0023416 FBgn0023416 FBtr0100324 Ac3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6305 chr2RHet 73656 73710 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12727 chr3R 27356155 27356278 + 18 NA Intergenic Intergenic -12669 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_601 chr2L 4179782 4180019 + 18 NA Intergenic Intergenic 7889 FBgn0051961 FBgn0051961 FBtr0077485 CG31961 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2863 chr2L 18229994 18230206 + 18 NA intron (FBgn0261804, intron 3 of 14) protein_coding-intron (FBgn0261804, intron 3 of 14) -20863 FBgn0051802 FBgn0051802 FBtr0081058 CG31802 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6674 chr2RHet 2593164 2593328 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2572 chr2L 16999468 16999581 + 18 NA Intergenic Intergenic 13530 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3858 chr2L 22931441 22931495 + 18 NA Intergenic Intergenic -12908 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6481 chr2RHet 1550353 1550515 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_185 chr2L 1233014 1233072 + 18 NA Intergenic Intergenic -6995 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2541 chr2L 16920320 16920531 + 18 NA Intergenic Intergenic -10116 FBgn0026150 FBgn0026150 FBtr0304931 ApepP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12781 chr3R 27661072 27661126 + 18 NA exon (FBgn0039883, exon 5 of 8) protein_coding-exon (FBgn0039883, exon 5 of 8) 9533 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2605 chr2L 17099583 17099677 + 18 NA Intergenic Intergenic 11989 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12194 chr3R 24583377 24583678 + 18 NA promoter-TSS (FBgn0039597) protein_coding-promoter-TSS (FBgn0039597) 429 FBgn0039598 FBgn0039598 FBtr0085313 CG14061 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9618 chr3R 5636057 5636196 + 18 NA Intergenic Intergenic -1041 FBgn0037760 FBgn0037760 FBtr0082155 FBX011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10978 chr3R 15624993 15625683 + 18 NA intron (FBgn0014135, intron 3 of 4) protein_coding-intron (FBgn0014135, intron 3 of 4) -3074 FBgn0051471 FBgn0051471 FBtr0083794 tRNA:CR31471 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2795 chr2L 17948321 17948625 + 18 NA Intergenic Intergenic -14941 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9727 chr3R 6526851 6526921 + 18 NA exon (FBgn0020385, exon 5 of 6) protein_coding-exon (FBgn0020385, exon 5 of 6) 3911 FBgn0051391 FBgn0051391 FBtr0082321 CG31391 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7838 chr3L 12865915 12865995 + 18 NA Intergenic Intergenic -10024 FBgn0036320 FBgn0036320 FBtr0075936 CG10943 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6367 chr2RHet 551827 551899 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10357 chr3R 11588462 11588631 + 18 NA promoter-TSS (FBgn0038356) protein_coding-promoter-TSS (FBgn0038356) -291 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2676 chr2L 17358575 17358633 + 18 NA Intergenic Intergenic -3936 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11956 chr3R 23680421 23680640 + 18 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) 8858 FBgn0039551 FBgn0039551 FBtr0085226 Or98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6503 chr2RHet 1741406 1741543 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8487 chr3L 18181742 18181812 + 18 NA Intergenic Intergenic -3036 FBgn0003997 FBgn0003997 FBtr0332862 W protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10170 chr3R 10030043 10030279 + 18 NA intron (FBgn0011582, intron 2 of 5) protein_coding-intron (FBgn0011582, intron 2 of 5) 10371 FBgn0011582 FBgn0011582 FBtr0330711 DopR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10416 chr3R 11937943 11938061 + 18 NA Intergenic Intergenic 13064 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9893 chr3R 7983113 7983287 + 18 NA intron (FBgn0037993, intron 1 of 6) protein_coding-intron (FBgn0037993, intron 1 of 6) 1117 FBgn0037993 FBgn0037993 FBtr0082549 dpr15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3239 chr2L 20542660 20542714 + 18 NA Intergenic Intergenic -19737 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12947 chr4 611914 612039 + 18 NA Intergenic Intergenic 8205 FBgn0039911 FBgn0039911 FBtr0089080 CG1909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6517 chr2RHet 1868466 1868632 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3612 chr2L 22083271 22083594 + 18 NA Intergenic Intergenic 3760 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6331 chr2RHet 311518 311724 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5224 chr2R 11788919 11789244 + 18 NA intron (FBgn0264089, intron 1 of 20) protein_coding-intron (FBgn0264089, intron 1 of 19) -5149 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2406 chr2L 16072946 16073000 + 18 NA intron (FBgn0013433, intron 2 of 7) protein_coding-intron (FBgn0013433, intron 2 of 7) -22036 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6782 chr3L 1073373 1073427 + 18 NA intron (FBgn0004870, intron 1 of 3) protein_coding-intron (FBgn0004870, intron 1 of 3) 27689 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11533 chr3R 21858372 21858483 + 18 NA promoter-TSS (FBgn0002632) protein_coding-promoter-TSS (FBgn0002632) -206 FBgn0002632 FBgn0002632 FBtr0084959 m6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8287 chr3L 16728347 16728515 + 18 NA intron (FBgn0036659, intron 2 of 3) protein_coding-intron (FBgn0036659, intron 2 of 3) 1785 FBgn0036659 FBgn0036659 FBtr0075321 CG9701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7201 chr3L 6475482 6475782 + 18 NA intron (FBgn0261801, intron 5 of 6) protein_coding-intron (FBgn0261801, intron 5 of 6) 5892 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13376 chrUextra 17200800 17200854 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_794 chr2L 5640387 5640491 + 18 NA promoter-TSS (FBgn0262200) pre_miRNA-promoter-TSS (FBgn0262200) -561 FBgn0262256 FBgn0262256 FBtr0304352 mir-959 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2392 chr2L 16033119 16033266 + 18 NA intron (FBgn0028644, intron 3 of 7) protein_coding-intron (FBgn0028644, intron 3 of 7) -11360 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5553 chr2R 14889813 14890003 + 18 NA intron (FBgn0034412, intron 7 of 12) protein_coding-intron (FBgn0034412, intron 7 of 12) 7707 FBgn0263473 FBgn0263473 FBtr0309772 snoRNA:abba-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4472 chr2R 5690120 5690316 + 18 NA intron (FBgn0027589, intron 1 of 8) protein_coding-intron (FBgn0027589, intron 1 of 8) 4152 FBgn0027589 FBgn0027589 FBtr0088495 CG1688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10817 chr3R 14454176 14454285 + 18 NA promoter-TSS (FBgn0051228) tRNA-promoter-TSS (FBgn0051228) 30 FBgn0051228 FBgn0051228 FBtr0083693 tRNA:CR31228 tRNA Nup98-S2-pascual-garcia2017_R1_peak_52 chr2L 701424 701640 + 18 NA intron (FBgn0000497, intron 2 of 11) protein_coding-intron (FBgn0000497, intron 2 of 11) 13436 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6479 chr2RHet 1454618 1454846 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11961 chr3R 23721950 23722018 + 18 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 9581 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10232 chr3R 10683527 10683630 + 18 NA Intergenic Intergenic 1982 FBgn0038267 FBgn0038267 FBtr0083012 CG17304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3114 chr2L 19878317 19878406 + 18 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 14189 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5585 chr2R 15155024 15155078 + 18 NA Intergenic Intergenic 7637 FBgn0034423 FBgn0034423 FBtr0086511 CG7229 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8917 chr3LHet 2128950 2129157 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5480 chr2R 14146048 14146153 + 18 NA Intergenic Intergenic 18598 FBgn0003022 FBgn0003022 FBtr0086768 Ote protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4835 chr2R 8548038 8548092 + 18 NA exon (FBgn0261673, exon 5 of 6) protein_coding-exon (FBgn0261673, exon 5 of 6) 4604 FBgn0033763 FBgn0033763 FBtr0301237 CG8646 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2762 chr2L 17809856 17809982 + 18 NA intron (FBgn0262018, intron 5 of 14) protein_coding-intron (FBgn0262018, intron 4 of 13) 2753 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10564 chr3R 12773403 12773601 + 18 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -16167 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2006 chr2L 14512742 14512838 + 18 NA Intergenic Intergenic -5301 FBgn0011862 FBgn0011862 FBtr0089613 tRNA:G3:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_10019 chr3R 8894833 8895028 + 18 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 11449 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7948 chr3L 13705555 13705609 + 18 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 90918 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_696 chr2L 4810835 4811014 + 18 NA Intergenic Intergenic -2085 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11864 chr3R 23313323 23313408 + 18 NA promoter-TSS (FBgn0039520) protein_coding-promoter-TSS (FBgn0039520) -284 FBgn0039520 FBgn0039520 FBtr0085184 Gr98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7784 chr3L 12460586 12460671 + 18 NA exon (FBgn0000625, exon 1 of 5) protein_coding-exon (FBgn0000625, exon 1 of 5) 493 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_172 chr2L 1139475 1139586 + 18 NA exon (FBgn0031306, exon 4 of 5) protein_coding-exon (FBgn0031306, exon 4 of 5) -3671 FBgn0031307 FBgn0031307 FBtr0077958 MFS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4513 chr2R 6097867 6098127 + 18 NA intron (FBgn0000448, intron 1 of 8) protein_coding-intron (FBgn0000448, intron 1 of 8) -10801 FBgn0085250 FBgn0085250 FBtr0299834 CG34221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5995 chr2R 18612651 18612715 + 18 NA exon (FBgn0028371, exon 3 of 5) protein_coding-exon (FBgn0028371, exon 3 of 5) 12477 FBgn0050268 FBgn0050268 FBtr0273311 CG30268 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9652 chr3R 5947798 5947873 + 18 NA promoter-TSS (FBgn0037789) protein_coding-promoter-TSS (FBgn0037789) 340 FBgn0051477 FBgn0051477 FBtr0082180 CG31477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7918 chr3L 13445331 13445514 + 18 NA intron (FBgn0036368, intron 1 of 14) protein_coding-intron (FBgn0036368, intron 1 of 14) 1552 FBgn0036368 FBgn0036368 FBtr0304792 CG10738 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7190 chr3L 6388970 6389024 + 18 NA Intergenic Intergenic -4695 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2699 chr2L 17580450 17580504 + 18 NA Intergenic Intergenic 5803 FBgn0262400 FBgn0262400 FBtr0304303 mir-287 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_102 chr2L 899060 899114 + 18 NA exon (FBgn0002563, exon 2 of 2) protein_coding-exon (FBgn0002563, exon 2 of 2) 443 FBgn0002563 FBgn0002563 FBtr0078025 Lsp1beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6486 chr2RHet 1640804 1641231 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12550 chr3R 26591383 26591535 + 18 NA promoter-TSS (FBgn0004606) protein_coding-promoter-TSS (FBgn0004606) -189 FBgn0004606 FBgn0004606 FBtr0085702 zfh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4412 chr2R 5250204 5250268 + 18 NA exon (FBgn0040775, exon 2 of 2) protein_coding-exon (FBgn0040775, exon 2 of 2) 175 FBgn0040775 FBgn0040775 FBtr0088557 CG12158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10787 chr3R 14332511 14332715 + 18 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) 38695 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7017 chr3L 3976845 3976899 + 18 NA Intergenic Intergenic 3973 FBgn0264516 FBgn0264516 FBtr0333135 CG43915 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10960 chr3R 15543020 15543079 + 18 NA Intergenic Intergenic -1400 FBgn0085315 FBgn0085315 FBtr0112482 CG34286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3812 chr2L 22706783 22706985 + 18 NA Intergenic Intergenic -15876 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5753 chr2R 16580785 16581025 + 18 NA exon (FBgn0034545, exon 2 of 2) protein_coding-exon (FBgn0034545, exon 2 of 2) 530 FBgn0034545 FBgn0034545 FBtr0086237 CG13438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13687 chrX 12820238 12820349 + 18 NA intron (FBgn0086675, intron 2 of 6) protein_coding-intron (FBgn0086675, intron 2 of 7) -12257 FBgn0086675 FBgn0086675 FBtr0333319 fne protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3253 chr2L 20584776 20585038 + 18 NA Intergenic Intergenic 19289 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7746 chr3L 12220037 12220091 + 18 NA intron (FBgn0260941, intron 2 of 9) protein_coding-intron (FBgn0260941, intron 3 of 9) -12514 FBgn0260941 FBgn0260941 FBtr0301053 app protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1235 chr2L 8856412 8856634 + 18 NA Intergenic Intergenic -6253 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5770 chr2R 16748949 16749267 + 18 NA Intergenic Intergenic -4498 FBgn0034554 FBgn0034554 FBtr0071514 CG15227 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4339 chr2R 4756366 4756430 + 18 NA exon (FBgn0011286, exon 8 of 27) protein_coding-exon (FBgn0011286, exon 8 of 27) 8529 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8474 chr3L 18073151 18073205 + 18 NA Intergenic Intergenic 5232 FBgn0262898 FBgn0262898 FBtr0306318 CG43253 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_848 chr2L 6088493 6088702 + 18 NA intron (FBgn0028420, intron 1 of 3) protein_coding-intron (FBgn0028420, intron 1 of 3) -2972 FBgn0028420 FBgn0028420 FBtr0290297 Kr-h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3394 chr2L 21375783 21375873 + 18 NA exon (FBgn0032945, exon 2 of 3) protein_coding-exon (FBgn0032945, exon 2 of 3) -4172 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_476 chr2L 3183271 3183362 + 18 NA exon (FBgn0085422, exon 12 of 13) protein_coding-exon (FBgn0085422, exon 12 of 13) 9327 FBgn0031512 FBgn0031512 FBtr0077578 CG15404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12770 chr3R 27590320 27590610 + 18 NA promoter-TSS (FBgn0003065) protein_coding-promoter-TSS (FBgn0003065) 23 FBgn0003065 FBgn0003065 FBtr0085859 CG2150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3177 chr2L 20248598 20248690 + 18 NA TTS (FBgn0058172) protein_coding-TTS (FBgn0058172) 421 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1601 chr2L 11964725 11964779 + 18 NA intron (FBgn0263019, intron 1 of 1) ncRNA-intron (FBgn0263019, intron 1 of 2) 6342 FBgn0263019 FBgn0263019 FBtr0306898 CR43314 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9889 chr3R 7950720 7950890 + 18 NA intron (FBgn0037992, intron 2 of 6) protein_coding-intron (FBgn0037992, intron 1 of 4) 3114 FBgn0037992 FBgn0037992 FBtr0308294 CG4702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10183 chr3R 10172872 10173031 + 18 NA intron (FBgn0024321, intron 1 of 3) protein_coding-intron (FBgn0024321, intron 1 of 3) 14510 FBgn0051320 FBgn0051320 FBtr0082943 CG31320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_251 chr2L 1415467 1415529 + 18 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 4951 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5841 chr2R 17409730 17409815 + 18 NA promoter-TSS (FBgn0003731) protein_coding-promoter-TSS (FBgn0003731) -419 FBgn0050289 FBgn0050289 FBtr0071697 CG30289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2853 chr2L 18161506 18161600 + 18 NA exon (FBgn0261804, exon 15 of 15) protein_coding-exon (FBgn0261804, exon 15 of 15) -2867 FBgn0032671 FBgn0032671 FBtr0081062 CG7200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1315 chr2L 9071306 9071486 + 18 NA promoter-TSS (FBgn0051708) protein_coding-promoter-TSS (FBgn0051708) -234 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4288 chr2R 4468640 4468694 + 18 NA exon (FBgn0259226, exon 3 of 6) protein_coding-exon (FBgn0259226, exon 3 of 6) -2676 FBgn0259226 FBgn0259226 FBtr0299788 CG42326 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_754 chr2L 5413146 5413231 + 18 NA exon (FBgn0016660, exon 4 of 6) protein_coding-exon (FBgn0016660, exon 4 of 6) 8846 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9332 chr3R 3166338 3166462 + 18 NA Intergenic Intergenic -4391 FBgn0051496 FBgn0051496 FBtr0081582 CG31496 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11435 chr3R 20571963 20572077 + 18 NA exon (FBgn0004885, exon 9 of 14) protein_coding-exon (FBgn0004885, exon 9 of 14) -3435 FBgn0003719 FBgn0003719 FBtr0084691 tld protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1740 chr2L 12918362 12918662 + 18 NA exon (FBgn0040509, exon 6 of 12) protein_coding-exon (FBgn0040509, exon 6 of 12) 1698 FBgn0040509 FBgn0040509 FBtr0080414 ACXB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8181 chr3L 15873981 15874096 + 18 NA intron (FBgn0036542, intron 2 of 15) protein_coding-intron (FBgn0036542, intron 2 of 10) 18091 FBgn0036542 FBgn0036542 FBtr0100034 pHCl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6231 chr2R 20523712 20523822 + 18 NA intron (FBgn0035041, intron 2 of 7) protein_coding-intron (FBgn0035041, intron 2 of 7) 2343 FBgn0035041 FBgn0035041 FBtr0072336 CG13594 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9224 chr3R 2588340 2588417 + 18 NA promoter-TSS (FBgn0000071) protein_coding-promoter-TSS (FBgn0000071) -750 FBgn0000071 FBgn0000071 FBtr0081620 Ama protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7678 chr3L 11704458 11704518 + 18 NA promoter-TSS (FBgn0036198) protein_coding-promoter-TSS (FBgn0036198) -2 FBgn0036198 FBgn0036198 FBtr0076123 crim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5173 chr2R 11328206 11328340 + 18 NA intron (FBgn0263980, intron 1 of 4) protein_coding-intron (FBgn0263980, intron 11 of 14) -12745 FBgn0085217 FBgn0085217 FBtr0112381 CG34188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5053 chr2R 10323130 10323184 + 18 NA promoter-TSS (FBgn0261613) protein_coding-promoter-TSS (FBgn0261613) -247 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3439 chr2L 21724883 21725549 + 18 NA exon (FBgn0051619, exon 16 of 19) protein_coding-exon (FBgn0051619, exon 16 of 19) 32250 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2874 chr2L 18288271 18288325 + 18 NA Intergenic Intergenic -2614 FBgn0051787 FBgn0051787 FBtr0081055 CG31787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10915 chr3R 15262830 15263057 + 18 NA intron (FBgn0051221, intron 2 of 4) protein_coding-intron (FBgn0051221, intron 2 of 4) -12022 FBgn0038706 FBgn0038706 FBtr0083770 CG3517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10652 chr3R 13453409 13453463 + 18 NA exon (FBgn0038531, exon 2 of 5) protein_coding-exon (FBgn0038531, exon 2 of 5) 587 FBgn0038531 FBgn0038531 FBtr0289974 CG14325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6095 chr2R 19369860 19369950 + 18 NA exon (FBgn0264339, exon 7 of 14) protein_coding-exon (FBgn0264339, exon 7 of 14) -4905 FBgn0264337 FBgn0264337 FBtr0331988 CR43793 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8002 chr3L 14100113 14100211 + 18 NA exon (FBgn0036411, exon 2 of 3) protein_coding-exon (FBgn0036411, exon 2 of 3) 1056 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10958 chr3R 15527409 15527476 + 18 NA Intergenic Intergenic 14207 FBgn0085315 FBgn0085315 FBtr0112482 CG34286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8900 chr3LHet 1350564 1350629 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11681 chr3R 22482799 22482909 + 18 NA exon (FBgn0243586, exon 2 of 2) protein_coding-exon (FBgn0243586, exon 2 of 2) 686 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2484 chr2L 16553719 16553832 + 18 NA intron (FBgn0259735, intron 1 of 4) protein_coding-intron (FBgn0259735, intron 1 of 2) -3816 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4354 chr2R 4883037 4883118 + 18 NA exon (FBgn0085379, exon 5 of 9) protein_coding-exon (FBgn0085379, exon 5 of 9) -10014 FBgn0033359 FBgn0033359 FBtr0273385 CG8213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9334 chr3R 3172819 3172873 + 18 NA TTS (FBgn0051496) protein_coding-TTS (FBgn0051496) 291 FBgn0051501 FBgn0051501 FBtr0081583 nxf4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6581 chr2RHet 1970971 1971205 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10766 chr3R 14181694 14181748 + 18 NA intron (FBgn0038606, intron 1 of 3) protein_coding-intron (FBgn0038606, intron 1 of 3) 4978 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1391 chr2L 9862811 9863041 + 18 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 14637 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10368 chr3R 11688698 11689050 + 18 NA exon (FBgn0051183, exon 4 of 8) protein_coding-exon (FBgn0051183, exon 4 of 8) 2956 FBgn0038377 FBgn0038377 FBtr0083186 CG9632 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2679 chr2L 17367428 17367482 + 18 NA TTS (FBgn0032633) protein_coding-TTS (FBgn0032633) 3959 FBgn0051804 FBgn0051804 FBtr0080967 CG31804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6661 chr2RHet 2387837 2387901 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9401 chr3R 3770400 3770490 + 18 NA intron (FBgn0000504, intron 2 of 4) protein_coding-intron (FBgn0000504, intron 2 of 4) 22685 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7723 chr3L 12015143 12015206 + 18 NA intron (FBgn0041096, intron 4 of 6) protein_coding-intron (FBgn0041096, intron 4 of 7) -5727 FBgn0264726 FBgn0264726 FBtr0334107 CR43994 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1256 chr2L 8879513 8879615 + 18 NA Intergenic Intergenic -11925 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8620 chr3L 20841410 20841542 + 18 NA exon (FBgn0052432, exon 11 of 20) protein_coding-exon (FBgn0052432, exon 11 of 20) 6389 FBgn0037031 FBgn0037031 FBtr0333371 CG11456 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3867 chr2LHet 156127 156312 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6902 chr3L 2202234 2202333 + 18 NA Intergenic Intergenic 4852 FBgn0035315 FBgn0035315 FBtr0072872 CG8960 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2613 chr2L 17127309 17127624 + 18 NA Intergenic Intergenic -1505 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2778 chr2L 17881950 17882004 + 18 NA Intergenic Intergenic -6730 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3944 chr2R 820201 820355 + 18 NA Intergenic Intergenic -16894 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13187 chrU 1932071 1932265 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6662 chr2RHet 2408247 2408301 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12028 chr3R 23996952 23997178 + 18 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 24463 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2081 chr2L 14773205 14773259 + 18 NA TTS (FBgn0032549) protein_coding-TTS (FBgn0032549) 1749 FBgn0032549 FBgn0032549 FBtr0301695 CG4650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1600 chr2L 11959612 11959871 + 18 NA exon (FBgn0263019, exon 2 of 2) ncRNA-exon (FBgn0263019, exon 2 of 2) -6252 FBgn0263107 FBgn0263107 FBtr0304301 bft pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4700 chr2R 7511710 7512092 + 18 NA exon (FBgn0033638, exon 3 of 8) protein_coding-exon (FBgn0033638, exon 3 of 8) -5373 FBgn0086712 FBgn0086712 FBtr0088090 Egm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7714 chr3L 11930500 11930569 + 18 NA exon (FBgn0036223, exon 2 of 3) protein_coding-exon (FBgn0036223, exon 2 of 3) 1438 FBgn0036223 FBgn0036223 FBtr0332072 CG14126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_748 chr2L 5398658 5399008 + 18 NA Intergenic Intergenic -5509 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10942 chr3R 15430621 15430746 + 18 NA exon (FBgn0038716, exon 4 of 6) protein_coding-exon (FBgn0038716, exon 4 of 6) 1586 FBgn0038716 FBgn0038716 FBtr0304745 CG7342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_532 chr2L 3657465 3657670 + 18 NA promoter-TSS (FBgn0000721) protein_coding-promoter-TSS (FBgn0000721) -5178 FBgn0085369 FBgn0085369 FBtr0302391 CG34340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3167 chr2L 20225862 20226045 + 18 NA Intergenic Intergenic -22270 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7481 chr3L 9065786 9065840 + 18 NA promoter-TSS (FBgn0035960) protein_coding-promoter-TSS (FBgn0035960) 18 FBgn0035959 FBgn0035959 FBtr0331549 CG4911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1177 chr2L 8764499 8764709 + 18 NA TTS (FBgn0032066) protein_coding-TTS (FBgn0032066) 4104 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9271 chr3R 2820279 2820438 + 18 NA intron (FBgn0260642, intron 1 of 6) protein_coding-intron (FBgn0260642, intron 1 of 6) -57699 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8505 chr3L 18345612 18345688 + 18 NA Intergenic Intergenic 45885 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5286 chr2R 12350087 12350170 + 18 NA Intergenic Intergenic -4086 FBgn0261292 FBgn0261292 FBtr0091520 CheB53a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9827 chr3R 7319754 7319941 + 18 NA Intergenic Intergenic -6945 FBgn0037908 FBgn0037908 FBtr0082395 dpr5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_352 chr2L 1970556 1970916 + 18 NA promoter-TSS (FBgn0031375) protein_coding-promoter-TSS (FBgn0031375) -3390 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5959 chr2R 18227070 18227210 + 18 NA exon (FBgn0034720, exon 9 of 14) protein_coding-exon (FBgn0034720, exon 9 of 14) 6509 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3255 chr2L 20589587 20589641 + 18 NA Intergenic Intergenic 14582 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9403 chr3R 3782968 3783042 + 18 NA intron (FBgn0000504, intron 2 of 4) protein_coding-intron (FBgn0000504, intron 2 of 4) 10125 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12698 chr3R 27190766 27190920 + 18 NA intron (FBgn0085376, intron 15 of 16) protein_coding-intron (FBgn0085376, intron 15 of 16) -7306 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7937 chr3L 13634368 13634436 + 18 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 3 of 12) 20465 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7972 chr3L 13821057 13821212 + 18 NA Intergenic Intergenic -9768 FBgn0262813 FBgn0262813 FBtr0306058 CG43184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7195 chr3L 6444442 6444636 + 18 NA intron (FBgn0261801, intron 2 of 6) protein_coding-intron (FBgn0261801, intron 2 of 6) 36985 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6912 chr3L 2248201 2248274 + 18 NA promoter-TSS (FBgn0052305) protein_coding-promoter-TSS (FBgn0052305) -398 FBgn0052305 FBgn0052305 FBtr0301322 CG32305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2974 chr2L 19175241 19175295 + 18 NA exon (FBgn0010300, exon 3 of 3) protein_coding-exon (FBgn0010300, exon 3 of 3) 6434 FBgn0032763 FBgn0032763 FBtr0081233 CG17568 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_477 chr2L 3193467 3193521 + 18 NA intron (FBgn0085422, intron 1 of 12) protein_coding-intron (FBgn0085422, intron 1 of 12) 6126 FBgn0085422 FBgn0085422 FBtr0112637 CG34393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3716 chr2L 22394166 22394426 + 18 NA Intergenic Intergenic 34029 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7378 chr3L 8219179 8219308 + 18 NA Intergenic Intergenic -3081 FBgn0035860 FBgn0035860 FBtr0076701 eIF4E-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9345 chr3R 3242506 3242589 + 18 NA Intergenic Intergenic -2173 FBgn0051544 FBgn0051544 FBtr0081532 CG31544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5230 chr2R 11810047 11810116 + 18 NA promoter-TSS (FBgn0264089) protein_coding-promoter-TSS (FBgn0264089) -458 FBgn0264089 FBgn0264089 FBtr0330733 sli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8500 chr3L 18306956 18307014 + 18 NA Intergenic Intergenic -9468 FBgn0015946 FBgn0015946 FBtr0075130 grim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3972 chr2R 859810 859997 + 18 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 22731 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4731 chr2R 7708185 7708272 + 18 NA Intergenic Intergenic -4642 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4359 chr2R 4896279 4896490 + 18 NA exon (FBgn0033362, exon 3 of 6) protein_coding-exon (FBgn0033362, exon 3 of 6) -2292 FBgn0085379 FBgn0085379 FBtr0112560 CG34350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4164 chr2R 3321945 3322033 + 18 NA exon (FBgn0003460, exon 7 of 7) protein_coding-exon (FBgn0003460, exon 7 of 7) -5891 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12813 chr3R 27834165 27834390 + 18 NA Intergenic Intergenic 21706 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9029 chr3R 985510 985564 + 18 NA exon (FBgn0037294, exon 1 of 1) protein_coding-exon (FBgn0037294, exon 1 of 1) 203 FBgn0037294 FBgn0037294 FBtr0078773 CG12590 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5431 chr2R 13809423 13809526 + 18 NA exon (FBgn0011589, exon 16 of 17) protein_coding-exon (FBgn0011589, exon 16 of 17) 26891 FBgn0034284 FBgn0034284 FBtr0086803 CG14491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4504 chr2R 5978093 5978273 + 18 NA exon (FBgn0033484, exon 2 of 6) protein_coding-exon (FBgn0033484, exon 2 of 6) -3615 FBgn0028560 FBgn0028560 FBtr0089674 sut4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3711 chr2L 22370044 22370249 + 18 NA Intergenic Intergenic 15791 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6492 chr2RHet 1704472 1704526 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3071 chr2L 19691755 19691838 + 18 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 9172 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3535 chr2L 21958660 21958922 + 18 NA Intergenic Intergenic 34142 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7899 chr3L 13332492 13332546 + 18 NA Intergenic Intergenic -9746 FBgn0036348 FBgn0036348 FBtr0075838 CG17687 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11870 chr3R 23324659 23324863 + 18 NA Intergenic Intergenic 2986 FBgn0262613 FBgn0262613 FBtr0305290 CG43139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4520 chr2R 6129567 6129675 + 18 NA exon (FBgn0005619, exon 2 of 8) protein_coding-exon (FBgn0005619, exon 2 of 8) 1247 FBgn0005619 FBgn0005619 FBtr0331924 Hdc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13415 chrUextra 28534394 28534531 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4531 chr2R 6218713 6218767 + 18 NA exon (FBgn0261698, exon 18 of 29) protein_coding-exon (FBgn0261698, exon 18 of 29) -10735 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1200 chr2L 8795414 8795789 + 18 NA Intergenic Intergenic -13107 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4361 chr2R 4901063 4901117 + 18 NA promoter-TSS (FBgn0033362) protein_coding-promoter-TSS (FBgn0033362) -1521 FBgn0033362 FBgn0033362 FBtr0301193 CG8172 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7716 chr3L 11943105 11943159 + 18 NA TTS (FBgn0036226) protein_coding-TTS (FBgn0036226) 193 FBgn0036227 FBgn0036227 FBtr0076042 CG17826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11023 chr3R 15898606 15898812 + 18 NA Intergenic Intergenic 9463 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7728 chr3L 12059196 12059327 + 18 NA Intergenic Intergenic -1302 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding Nup98-S2-pascual-garcia2017_R1_peak_524 chr2L 3592257 3592317 + 18 NA Intergenic Intergenic -1986 FBgn0264371 FBgn0264371 FBtr0332223 CR43823 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5338 chr2R 12833170 12833335 + 18 NA TTS (FBgn0085219) protein_coding-TTS (FBgn0085219) 192 FBgn0034168 FBgn0034168 FBtr0087050 CG15614 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5119 chr2R 10866763 10866817 + 18 NA exon (FBgn0033987, exon 6 of 6) protein_coding-exon (FBgn0033987, exon 6 of 6) -1992 FBgn0033988 FBgn0033988 FBtr0301507 pcs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10533 chr3R 12628628 12628695 + 18 NA Intergenic Intergenic 14628 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6590 chr2RHet 2069300 2069528 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7852 chr3L 12997709 12998081 + 18 NA Intergenic Intergenic -2022 FBgn0036330 FBgn0036330 FBtr0300699 CG11263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11717 chr3R 22592841 22592909 + 18 NA Intergenic Intergenic 17055 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3495 chr2L 21860984 21861431 + 18 NA Intergenic Intergenic 32614 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2991 chr2L 19255904 19255963 + 18 NA Intergenic Intergenic 6960 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9914 chr3R 8099836 8099995 + 18 NA TTS (FBgn0259975) protein_coding-TTS (FBgn0259975) 1067 FBgn0259975 FBgn0259975 FBtr0300319 Sfp87B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1124 chr2L 8616055 8616162 + 18 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -3920 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11581 chr3R 22108609 22108728 + 18 NA Intergenic Intergenic 20284 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5182 chr2R 11376064 11376243 + 18 NA exon (FBgn0034022, exon 3 of 4) protein_coding-exon (FBgn0034022, exon 3 of 4) -5815 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10767 chr3R 14182768 14182919 + 18 NA intron (FBgn0038606, intron 1 of 3) protein_coding-intron (FBgn0038606, intron 1 of 3) 3856 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13093 chrU 201781 202226 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1469 chr2L 10798575 10798629 + 18 NA intron (FBgn0051869, intron 2 of 7) protein_coding-intron (FBgn0051869, intron 1 of 6) 2244 FBgn0051869 FBgn0051869 FBtr0290246 CG31869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2581 chr2L 17024907 17024961 + 18 NA Intergenic Intergenic -11880 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12020 chr3R 23973480 23973828 + 18 NA exon (FBgn0085383, exon 2 of 9) protein_coding-exon (FBgn0085383, exon 2 of 9) 1052 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2138 chr2L 14968786 14968981 + 18 NA intron (FBgn0259213, intron 1 of 19) protein_coding-intron (FBgn0259213, intron 1 of 19) 3417 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11773 chr3R 22915703 22916071 + 18 NA exon (FBgn0039481, exon 2 of 2) protein_coding-exon (FBgn0039481, exon 2 of 2) 965 FBgn0039481 FBgn0039481 FBtr0085135 Cpr97Eb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5517 chr2R 14527049 14527314 + 18 NA promoter-TSS (FBgn0050122) protein_coding-promoter-TSS (FBgn0050122) 119 FBgn0050227 FBgn0050227 FBtr0086603 tRNA:CR30227 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3401 chr2L 21386975 21387199 + 18 NA intron (FBgn0032946, intron 4 of 7) protein_coding-intron (FBgn0032946, intron 4 of 7) 7087 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_665 chr2L 4560233 4560296 + 18 NA exon (FBgn0053196, exon 8 of 47) protein_coding-exon (FBgn0053196, exon 8 of 47) 17937 FBgn0031613 FBgn0031613 FBtr0077444 HP6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_463 chr2L 3081918 3081972 + 18 NA intron (FBgn0015600, intron 4 of 8) protein_coding-intron (FBgn0015600, intron 6 of 10) 23483 FBgn0027571 FBgn0027571 FBtr0290093 CG3523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8087 chr3L 14845672 14845776 + 18 NA intron (FBgn0036454, intron 3 of 7) protein_coding-intron (FBgn0036454, intron 3 of 18) 41792 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3209 chr2L 20406846 20407213 + 18 NA Intergenic Intergenic -7635 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2812 chr2L 17990845 17991306 + 18 NA exon (FBgn0051742, exon 1 of 1) protein_coding-exon (FBgn0051742, exon 1 of 1) 657 FBgn0051742 FBgn0051742 FBtr0081025 CG31742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3086 chr2L 19729746 19729963 + 18 NA exon (FBgn0000464, exon 16 of 17) protein_coding-exon (FBgn0000464, exon 16 of 17) 5866 FBgn0032815 FBgn0032815 FBtr0331244 CG10462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6970 chr3L 3018312 3018366 + 18 NA Intergenic Intergenic -1083 FBgn0052487 FBgn0052487 FBtr0073007 CG32487 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6560 chr2RHet 1939161 1939317 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3913 chr2R 293266 293337 + 18 NA intron (FBgn0260798, intron 8 of 15) protein_coding-intron (FBgn0260798, intron 7 of 14) 65257 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12893 chr3RHet 2099040 2099165 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7466 chr3L 9003731 9003814 + 18 NA promoter-TSS (FBgn0035955) protein_coding-promoter-TSS (FBgn0035955) -834 FBgn0035955 FBgn0035955 FBtr0333909 CG5194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3322 chr2L 20994231 20994388 + 18 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -25342 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8276 chr3L 16542744 16542801 + 18 NA Intergenic Intergenic -4044 FBgn0036638 FBgn0036638 FBtr0075400 CG13033 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5987 chr2R 18517381 18517510 + 18 NA exon (FBgn0053143, exon 7 of 9) protein_coding-exon (FBgn0053143, exon 7 of 9) 2386 FBgn0053143 FBgn0053143 FBtr0071859 CG33143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7036 chr3L 4309498 4309739 + 18 NA Intergenic Intergenic -3865 FBgn0052251 FBgn0052251 FBtr0073286 CG32251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13101 chrU 218660 218793 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10574 chr3R 12798028 12798292 + 18 NA promoter-TSS (FBgn0000015) protein_coding-promoter-TSS (FBgn0000015) -2766 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4609 chr2R 6849395 6849457 + 18 NA Intergenic Intergenic -20220 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3942 chr2R 819132 819335 + 18 NA Intergenic Intergenic -17939 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1579 chr2L 11806925 11806998 + 18 NA intron (FBgn0020309, intron 1 of 7) protein_coding-intron (FBgn0020309, intron 1 of 7) 2011 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2550 chr2L 16943468 16943641 + 18 NA Intergenic Intergenic 1820 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13764 chrX 16046652 16046706 + 18 NA Intergenic Intergenic -28314 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8509 chr3L 18421304 18421419 + 18 NA Intergenic Intergenic 11681 FBgn0036786 FBgn0036786 FBtr0075119 skl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3464 chr2L 21782569 21782857 + 18 NA exon (FBgn0032964, exon 1 of 1) protein_coding-exon (FBgn0032964, exon 1 of 1) 1352 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10832 chr3R 14597547 14597652 + 18 NA intron (FBgn0038652, intron 2 of 10) protein_coding-intron (FBgn0038652, intron 2 of 10) -13004 FBgn0038651 FBgn0038651 FBtr0305051 CG14299 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8367 chr3L 17275833 17276001 + 18 NA Intergenic Intergenic 18401 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11643 chr3R 22319139 22319621 + 18 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 27585 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4017 chr2R 1745613 1745667 + 18 NA intron (FBgn0085414, intron 8 of 9) protein_coding-intron (FBgn0085414, intron 8 of 9) -35789 FBgn0263109 FBgn0263109 FBtr0307307 CG43366 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_365 chr2L 2073600 2073739 + 18 NA intron (FBgn0053516, intron 2 of 7) protein_coding-intron (FBgn0053516, intron 2 of 7) -6308 FBgn0031388 FBgn0031388 FBtr0077827 CG12674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8408 chr3L 17588998 17589057 + 18 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) 23398 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13118 chrU 285311 285490 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9824 chr3R 7298541 7298739 + 18 NA Intergenic Intergenic 9282 FBgn0046225 FBgn0046225 FBtr0082393 CG17230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7938 chr3L 13638437 13638551 + 18 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 3 of 12) 24557 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1121 chr2L 8612623 8612786 + 18 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -7324 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12444 chr3R 25598493 25598580 + 18 NA promoter-TSS (FBgn0001297) protein_coding-promoter-TSS (FBgn0001297) 7917 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6576 chr2RHet 1965736 1966088 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6890 chr3L 2032578 2032640 + 18 NA Intergenic Intergenic 5615 FBgn0259701 FBgn0259701 FBtr0309792 CG42355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5802 chr2R 17066421 17066475 + 18 NA promoter-TSS (FBgn0003162) protein_coding-promoter-TSS (FBgn0003162) -192 FBgn0003162 FBgn0003162 FBtr0308706 Pu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2361 chr2L 15913487 15913541 + 18 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) -3374 FBgn0032577 FBgn0032577 FBtr0080792 CG13244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_729 chr2L 5185729 5185783 + 18 NA exon (FBgn0261836, exon 6 of 6) protein_coding-exon (FBgn0261836, exon 6 of 6) -2022 FBgn0082990 FBgn0082990 FBtr0113537 snoRNA:Psi28S-2263 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3625 chr2L 22121789 22121855 + 18 NA promoter-TSS (FBgn0032974) protein_coding-promoter-TSS (FBgn0032974) -18 FBgn0032974 FBgn0032974 FBtr0331656 CG3651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_525 chr2L 3596381 3596607 + 18 NA Intergenic Intergenic -6193 FBgn0264371 FBgn0264371 FBtr0332223 CR43823 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9775 chr3R 6887959 6888126 + 18 NA Intergenic Intergenic -26100 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4516 chr2R 6107218 6107330 + 18 NA intron (FBgn0000448, intron 1 of 8) protein_coding-intron (FBgn0000448, intron 1 of 8) 8184 FBgn0000448 FBgn0000448 FBtr0306346 Hr46 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4492 chr2R 5842813 5842896 + 18 NA intron (FBgn0011656, intron 1 of 9) protein_coding-intron (FBgn0011656, intron 1 of 9) 3496 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4567 chr2R 6364601 6364657 + 18 NA intron (FBgn0261862, intron 1 of 8) protein_coding-intron (FBgn0261862, intron 1 of 8) -1646 FBgn0261862 FBgn0261862 FBtr0301282 whd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5512 chr2R 14471804 14471989 + 18 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 27364 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9216 chr3R 2559862 2559916 + 18 NA intron (FBgn0051481, intron 2 of 8) protein_coding-intron (FBgn0051481, intron 2 of 8) 7896 FBgn0051481 FBgn0051481 FBtr0089279 pb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3780 chr2L 22616960 22617103 + 18 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 27496 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9586 chr3R 5150887 5150963 + 18 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) 3302 FBgn0037676 FBgn0037676 FBtr0301210 CG8861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10496 chr3R 12409491 12409565 + 18 NA promoter-TSS (FBgn0020907) protein_coding-promoter-TSS (FBgn0020907) -146 FBgn0020907 FBgn0020907 FBtr0083361 Scp2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1730 chr2L 12877687 12877768 + 18 NA Intergenic Intergenic -34803 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11207 chr3R 17264406 17264519 + 18 NA Intergenic Intergenic -4607 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5290 chr2R 12365274 12365328 + 18 NA Intergenic Intergenic 7756 FBgn0034131 FBgn0034131 FBtr0087127 CG15712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6327 chr2RHet 173612 173686 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4895 chr2R 8981453 8981507 + 18 NA Intergenic Intergenic -14437 FBgn0033791 FBgn0033791 FBtr0087794 Drl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10353 chr3R 11580929 11581031 + 18 NA Intergenic Intergenic -7857 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3406 chr2L 21556560 21557146 + 18 NA Intergenic Intergenic 13864 FBgn0051614 FBgn0051614 FBtr0085895 His-Psi:CR31614 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5701 chr2R 16090617 16090702 + 18 NA Intergenic Intergenic 9465 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12586 chr3R 26750633 26750947 + 18 NA intron (FBgn0020912, intron 4 of 4) protein_coding-intron (FBgn0020912, intron 4 of 4) 11439 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6657 chr2RHet 2373831 2373901 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10785 chr3R 14328261 14328460 + 18 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 42948 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13627 chrX 9399474 9399528 + 18 NA intron (FBgn0263508, intron 1 of 1) ncRNA-intron (FBgn0263508, intron 1 of 1) 1032 FBgn0263508 FBgn0263508 FBtr0309529 CR43497 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9557 chr3R 5111645 5111792 + 18 NA Intergenic Intergenic 18964 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1484 chr2L 10926515 10926807 + 18 NA intron (FBgn0261871, intron 2 of 8) protein_coding-intron (FBgn0261871, intron 2 of 7) -10001 FBgn0032318 FBgn0032318 FBtr0080145 CG14072 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2838 chr2L 18084269 18084539 + 18 NA TTS (FBgn0002939) protein_coding-TTS (FBgn0002939) 136 FBgn0051741 FBgn0051741 FBtr0081032 CG31741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12181 chr3R 24566174 24566710 + 18 NA exon (FBgn0039595, exon 2 of 4) protein_coding-exon (FBgn0039595, exon 2 of 4) 4043 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7800 chr3L 12587875 12587929 + 18 NA exon (FBgn0015904, exon 5 of 5) protein_coding-exon (FBgn0015904, exon 5 of 5) 14130 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8725 chr3L 23339485 23339545 + 18 NA TTS (FBgn0052230) protein_coding-TTS (FBgn0052230) 7089 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10835 chr3R 14642910 14643096 + 18 NA intron (FBgn0038653, intron 1 of 3) protein_coding-intron (FBgn0038653, intron 1 of 2) -24933 FBgn0038652 FBgn0038652 FBtr0083679 CG7720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12407 chr3R 25521287 25521669 + 18 NA exon (FBgn0039683, exon 4 of 4) protein_coding-exon (FBgn0039683, exon 4 of 4) 3165 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7115 chr3L 5838726 5838780 + 18 NA promoter-TSS (FBgn0003984) protein_coding-promoter-TSS (FBgn0003984) 11 FBgn0003984 FBgn0003984 FBtr0077082 vn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1981 chr2L 14436739 14437000 + 18 NA Intergenic Intergenic -11738 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7203 chr3L 6521054 6521268 + 18 NA intron (FBgn0020251, intron 2 of 5) protein_coding-intron (FBgn0020251, intron 3 of 6) -2668 FBgn0052396 FBgn0052396 FBtr0076969 CG32396 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3960 chr2R 846127 846288 + 18 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 9035 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5992 chr2R 18597331 18597421 + 18 NA exon (FBgn0050275, exon 7 of 14) protein_coding-exon (FBgn0050275, exon 7 of 14) -1329 FBgn0263992 FBgn0263992 FBtr0330250 CR43735 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2079 chr2L 14767639 14767795 + 18 NA TTS (FBgn0028868) protein_coding-TTS (FBgn0028868) 1809 FBgn0028868 FBgn0028868 FBtr0080672 CG4701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7028 chr3L 4190181 4190236 + 18 NA exon (FBgn0003710, exon 2 of 3) protein_coding-exon (FBgn0003710, exon 2 of 3) 1709 FBgn0003710 FBgn0003710 FBtr0073219 tipE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9941 chr3R 8363264 8363430 + 18 NA intron (FBgn0250910, intron 2 of 7) protein_coding-intron (FBgn0250910, intron 2 of 9) 10604 FBgn0250910 FBgn0250910 FBtr0308597 Octbeta3R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1863 chr2L 13997813 13998020 + 18 NA intron (FBgn0003255, intron 1 of 14) protein_coding-intron (FBgn0003255, intron 1 of 14) -7197 FBgn0003255 FBgn0003255 FBtr0301918 rk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10038 chr3R 9040143 9040391 + 18 NA promoter-TSS (FBgn0038126) protein_coding-promoter-TSS (FBgn0038126) -80 FBgn0038126 FBgn0038126 FBtr0082782 CG8483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8854 chr3LHet 558248 558390 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3319 chr2L 20986519 20986683 + 18 NA intron (FBgn0250867, intron 5 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -17634 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9376 chr3R 3574324 3574408 + 18 NA exon (FBgn0037513, exon 3 of 4) protein_coding-exon (FBgn0037513, exon 3 of 4) 1432 FBgn0037513 FBgn0037513 FBtr0081780 pyd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10261 chr3R 10903768 10903866 + 18 NA promoter-TSS (FBgn0038282) protein_coding-promoter-TSS (FBgn0038282) -890 FBgn0038282 FBgn0038282 FBtr0089376 dpr9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7920 chr3L 13454429 13454520 + 18 NA intron (FBgn0036368, intron 4 of 14) protein_coding-intron (FBgn0036368, intron 4 of 14) -4136 FBgn0036367 FBgn0036367 FBtr0075824 CG10116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1185 chr2L 8778338 8778535 + 18 NA exon (FBgn0032069, exon 5 of 5) protein_coding-exon (FBgn0032069, exon 5 of 5) -2179 FBgn0032068 FBgn0032068 FBtr0079742 CG9466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11817 chr3R 23181486 23181656 + 18 NA intron (FBgn0260487, intron 1 of 6) protein_coding-intron (FBgn0260487, intron 1 of 6) -3541 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13243 chrU 3420235 3420431 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7288 chr3L 7192411 7192470 + 18 NA Intergenic Intergenic -9423 FBgn0263218 FBgn0263218 FBtr0299546 Dscam2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8786 chr3L 23804434 23804594 + 18 NA Intergenic Intergenic 27183 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2173 chr2L 15138417 15138489 + 18 NA Intergenic Intergenic -6064 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_8461 chr3L 18019728 18019782 + 18 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -13662 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13309 chrUextra 388158 388339 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_896 chr2L 6574154 6574211 + 18 NA exon (FBgn0031835, exon 14 of 16) protein_coding-exon (FBgn0031835, exon 14 of 16) -7595 FBgn0031834 FBgn0031834 FBtr0079330 CG13766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10516 chr3R 12526555 12526651 + 18 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) 33745 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2410 chr2L 16083774 16083872 + 18 NA Intergenic Intergenic -11186 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4441 chr2R 5465503 5465601 + 18 NA promoter-TSS (FBgn0085436) protein_coding-promoter-TSS (FBgn0085436) 960 FBgn0085436 FBgn0085436 FBtr0302122 Not1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7635 chr3L 11024878 11024957 + 18 NA Intergenic Intergenic 4238 FBgn0052081 FBgn0052081 FBtr0076198 CG32081 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9114 chr3R 1865514 1865597 + 18 NA Intergenic Intergenic 12066 FBgn0037397 FBgn0037397 FBtr0307114 CR1075 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_8042 chr3L 14372289 14372343 + 18 NA Intergenic Intergenic -2697 FBgn0262580 FBgn0262580 FBtr0304959 CG43120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2441 chr2L 16229634 16229688 + 18 NA Intergenic Intergenic -1814 FBgn0261999 FBgn0261999 FBtr0303797 CG42817 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5538 chr2R 14766525 14766676 + 18 NA intron (FBgn0034408, intron 1 of 6) protein_coding-intron (FBgn0034408, intron 1 of 7) 701 FBgn0034408 FBgn0034408 FBtr0086569 sano protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12305 chr3R 25173009 25173080 + 18 NA Intergenic Intergenic -27708 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1276 chr2L 8921408 8921462 + 18 NA intron (FBgn0085427, intron 2 of 10) protein_coding-intron (FBgn0085427, intron 2 of 10) -12628 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1173 chr2L 8760934 8760988 + 18 NA Intergenic Intergenic 7747 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9876 chr3R 7853554 7853618 + 18 NA TTS (FBgn0051358) protein_coding-TTS (FBgn0051358) 3893 FBgn0051358 FBgn0051358 FBtr0082554 CG31358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3469 chr2L 21787352 21787423 + 18 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) -3322 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11749 chr3R 22821757 22821890 + 18 NA promoter-TSS (FBgn0004842) protein_coding-promoter-TSS (FBgn0004842) -879 FBgn0004842 FBgn0004842 FBtr0085100 NepYr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_579 chr2L 4080743 4080817 + 18 NA intron (FBgn0000547, intron 5 of 8) protein_coding-intron (FBgn0000547, intron 5 of 8) -5110 FBgn0086032 FBgn0086032 FBtr0114308 snoRNA:Me28S-C437 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4663 chr2R 7301262 7301422 + 18 NA promoter-TSS (FBgn0040503) protein_coding-promoter-TSS (FBgn0040503) -673 FBgn0040503 FBgn0040503 FBtr0088135 CG7763 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10519 chr3R 12551632 12551707 + 18 NA intron (FBgn0003944, intron 1 of 3) protein_coding-intron (FBgn0003944, intron 1 of 3) 8679 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_368 chr2L 2090684 2090854 + 18 NA intron (FBgn0053516, intron 2 of 7) protein_coding-intron (FBgn0053516, intron 2 of 7) 10792 FBgn0031388 FBgn0031388 FBtr0077827 CG12674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5155 chr2R 11120627 11120685 + 18 NA intron (FBgn0259878, intron 6 of 8) protein_coding-intron (FBgn0259878, intron 6 of 8) 8428 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12420 chr3R 25529579 25530121 + 18 NA Intergenic Intergenic -10411 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6889 chr3L 2031817 2031887 + 18 NA Intergenic Intergenic 4861 FBgn0085288 FBgn0085288 FBtr0300030 CG34259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3876 chr2LHet 206914 206968 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_101 chr2L 896636 896763 + 18 NA Intergenic Intergenic -1945 FBgn0002563 FBgn0002563 FBtr0078025 Lsp1beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2072 chr2L 14747913 14748071 + 18 NA Intergenic Intergenic -2782 FBgn0260955 FBgn0260955 FBtr0301742 CG42587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2132 chr2L 14961501 14961697 + 18 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 10701 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2682 chr2L 17389226 17389370 + 18 NA promoter-TSS (FBgn0020503) protein_coding-promoter-TSS (FBgn0020503) 4283 FBgn0020503 FBgn0020503 FBtr0332452 CLIP-190 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6275 chr2R 20981769 20981823 + 18 NA intron (FBgn0003715, intron 2 of 3) protein_coding-intron (FBgn0003715, intron 2 of 3) 4915 FBgn0003715 FBgn0003715 FBtr0330231 CG16778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2296 chr2L 15577189 15577309 + 18 NA intron (FBgn0028370, intron 2 of 3) protein_coding-intron (FBgn0028370, intron 2 of 3) 24526 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10563 chr3R 12770431 12770507 + 18 NA promoter-TSS (FBgn0000015) protein_coding-promoter-TSS (FBgn0000015) -13134 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1546 chr2L 11505229 11505306 + 18 NA intron (FBgn0032362, intron 1 of 2) protein_coding-intron (FBgn0032362, intron 1 of 2) 3516 FBgn0032362 FBgn0032362 FBtr0305261 spz4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12415 chr3R 25527094 25527224 + 18 NA Intergenic Intergenic 8846 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9517 chr3R 4693280 4693334 + 18 NA promoter-TSS (FBgn0262614) protein_coding-promoter-TSS (FBgn0262614) 4652 FBgn0053551 FBgn0053551 FBtr0091521 tRNA:R:85Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_1513 chr2L 11220376 11220430 + 18 NA intron (FBgn0264442, intron 1 of 6) protein_coding-intron (FBgn0264442, intron 2 of 8) -14311 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10140 chr3R 9761015 9761096 + 18 NA Intergenic Intergenic 8069 FBgn0038188 FBgn0038188 FBtr0082879 Art9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12141 chr3R 24400873 24401195 + 18 NA Intergenic Intergenic 9800 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2560 chr2L 16967292 16967419 + 18 NA Intergenic Intergenic -5736 FBgn0053179 FBgn0053179 FBtr0329973 beat-IIIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7614 chr3L 10754028 10754153 + 18 NA Intergenic Intergenic -11002 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6059 chr2R 19053695 19053767 + 18 NA exon (FBgn0085400, exon 13 of 14) protein_coding-exon (FBgn0085400, exon 13 of 14) -8023 FBgn0034828 FBgn0034828 FBtr0306080 CG13545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10494 chr3R 12402267 12402321 + 18 NA intron (FBgn0020907, intron 4 of 4) protein_coding-intron (FBgn0020907, intron 4 of 4) -2714 FBgn0038446 FBgn0038446 FBtr0083303 CG14903 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5205 chr2R 11559204 11559328 + 18 NA intron (FBgn0023441, intron 2 of 12) protein_coding-intron (FBgn0023441, intron 2 of 9) -6667 FBgn0023441 FBgn0023441 FBtr0087347 fus protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1251 chr2L 8874709 8874798 + 18 NA Intergenic Intergenic 7986 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13070 chrU 129353 129423 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2119 chr2L 14918394 14918526 + 18 NA intron (FBgn0259213, intron 12 of 19) protein_coding-intron (FBgn0259213, intron 12 of 19) -6275 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7444 chr3L 8783131 8783201 + 18 NA intron (FBgn0261259, intron 15 of 18) protein_coding-intron (FBgn0261259, intron 13 of 16) -1521 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7870 chr3L 13099880 13099987 + 18 NA Intergenic Intergenic -7438 FBgn0010452 FBgn0010452 FBtr0330075 trn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10088 chr3R 9414762 9414958 + 18 NA TTS (FBgn0038158) protein_coding-TTS (FBgn0038158) 1141 FBgn0038158 FBgn0038158 FBtr0082788 CG14370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9357 chr3R 3406564 3406630 + 18 NA exon (FBgn0083963, exon 5 of 13) protein_coding-exon (FBgn0083963, exon 5 of 13) -31753 FBgn0015568 FBgn0015568 FBtr0081544 alpha-Est1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3111 chr2L 19865907 19866017 + 18 NA promoter-TSS (FBgn0263873) protein_coding-promoter-TSS (FBgn0263873) 9861 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1209 chr2L 8808045 8808139 + 18 NA Intergenic Intergenic -1308 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1020 chr2L 7879199 7879317 + 18 NA exon (FBgn0031959, exon 1 of 5) protein_coding-exon (FBgn0031959, exon 1 of 5) 292 FBgn0031959 FBgn0031959 FBtr0079561 spz3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3909 chr2R 199557 199783 + 18 NA Intergenic Intergenic -69226 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7733 chr3L 12152352 12152618 + 18 NA exon (FBgn0036259, exon 2 of 3) protein_coding-exon (FBgn0036259, exon 2 of 3) 4350 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9309 chr3R 3075465 3075526 + 18 NA promoter-TSS (FBgn0037492) protein_coding-promoter-TSS (FBgn0037492) -26 FBgn0037492 FBgn0037492 FBtr0081577 CG10050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7100 chr3L 5666252 5666306 + 18 NA exon (FBgn0085447, exon 7 of 35) protein_coding-exon (FBgn0085447, exon 7 of 35) -10932 FBgn0035627 FBgn0035627 FBtr0077125 Sse protein_coding Nup98-S2-pascual-garcia2017_R1_peak_940 chr2L 6897001 6897140 + 18 NA intron (FBgn0031866, intron 1 of 12) protein_coding-intron (FBgn0031866, intron 1 of 12) -5007 FBgn0262205 FBgn0262205 FBtr0304244 mir-932 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13001 chr4 1006084 1006205 + 18 NA Intergenic Intergenic -4207 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11370 chr3R 19221155 19221234 + 18 NA Intergenic Intergenic 5328 FBgn0263217 FBgn0263217 FBtr0307594 CR43387 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4562 chr2R 6302828 6302882 + 18 NA intron (FBgn0261698, intron 1 of 27) protein_coding-intron (FBgn0261698, intron 1 of 27) 1646 FBgn0261698 FBgn0261698 FBtr0303082 CG42732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13364 chrUextra 13201154 13201354 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4490 chr2R 5830442 5830557 + 18 NA exon (FBgn0011656, exon 1 of 11) protein_coding-exon (FBgn0011656, exon 1 of 11) 15851 FBgn0011656 FBgn0011656 FBtr0088446 Mef2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_276 chr2L 1476108 1476703 + 18 NA Intergenic Intergenic -15890 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12306 chr3R 25175560 25175686 + 18 NA Intergenic Intergenic -30287 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5955 chr2R 18220840 18220894 + 18 NA TTS (FBgn0034720) protein_coding-TTS (FBgn0034720) 236 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4372 chr2R 4942275 4942443 + 18 NA intron (FBgn0033368, intron 2 of 9) protein_coding-intron (FBgn0033368, intron 3 of 10) 5051 FBgn0033368 FBgn0033368 FBtr0308823 CG13743 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9107 chr3R 1738325 1738450 + 18 NA intron (FBgn0083949, intron 1 of 16) protein_coding-intron (FBgn0083949, intron 1 of 16) 26858 FBgn0083949 FBgn0083949 FBtr0110807 CG34113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12836 chr3RHet 546029 546241 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7093 chr3L 5438871 5439077 + 18 NA Intergenic Intergenic 16713 FBgn0085420 FBgn0085420 FBtr0290012 CG34391 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7291 chr3L 7213108 7213339 + 18 NA Intergenic Intergenic -14640 FBgn0035750 FBgn0035750 FBtr0333366 CG14826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1773 chr2L 13165496 13165561 + 18 NA promoter-TSS (FBgn0024291) protein_coding-promoter-TSS (FBgn0024291) -23 FBgn0024291 FBgn0024291 FBtr0080434 Sir2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4932 chr2R 9278948 9279002 + 18 NA exon (FBgn0263774, exon 1 of 2) protein_coding-exon (FBgn0263774, exon 1 of 2) 1748 FBgn0263774 FBgn0263774 FBtr0310562 CG43691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4539 chr2R 6229039 6229459 + 18 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 10417 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6917 chr3L 2284449 2284504 + 18 NA intron (FBgn0264002, intron 1 of 3) protein_coding-intron (FBgn0264002, intron 1 of 3) 1593 FBgn0264002 FBgn0264002 FBtr0330358 DmsR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11002 chr3R 15757878 15758104 + 18 NA exon (FBgn0021776, exon 1 of 1) protein_coding-exon (FBgn0021776, exon 1 of 1) 2851 FBgn0021776 FBgn0021776 FBtr0083848 mira protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5983 chr2R 18512711 18512765 + 18 NA intron (FBgn0053143, intron 3 of 7) protein_coding-intron (FBgn0053143, intron 3 of 7) -2321 FBgn0053143 FBgn0053143 FBtr0071859 CG33143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10555 chr3R 12742865 12742919 + 18 NA intron (FBgn0263610, intron 1 of 7) ncRNA-intron (FBgn0263610, intron 1 of 7) 6063 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11077 chr3R 16174986 16175150 + 18 NA Intergenic Intergenic 10079 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8687 chr3L 22294085 22294278 + 18 NA exon (FBgn0004449, exon 8 of 9) protein_coding-exon (FBgn0004449, exon 8 of 9) 12416 FBgn0027086 FBgn0027086 FBtr0078500 Aats-ile protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6359 chr2RHet 522759 522821 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4252 chr2R 4212026 4212080 + 18 NA Intergenic Intergenic -2952 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5751 chr2R 16567039 16567093 + 18 NA Intergenic Intergenic 7349 FBgn0041240 FBgn0041240 FBtr0086241 Gr57a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9762 chr3R 6811702 6811790 + 18 NA Intergenic Intergenic -7459 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10534 chr3R 12630025 12630079 + 18 NA Intergenic Intergenic 16019 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4703 chr2R 7518599 7518777 + 18 NA intron (FBgn0033638, intron 1 of 7) protein_coding-intron (FBgn0033638, intron 1 of 7) 9730 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11181 chr3R 17010909 17011022 + 18 NA exon (FBgn0264357, exon 2 of 9) protein_coding-exon (FBgn0264357, exon 2 of 9) -17038 FBgn0260004 FBgn0260004 FBtr0084027 Snmp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2503 chr2L 16666210 16666524 + 18 NA exon (FBgn0032593, exon 14 of 18) protein_coding-exon (FBgn0032593, exon 14 of 18) 9252 FBgn0259735 FBgn0259735 FBtr0300005 CG42389 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6025 chr2R 18861847 18862019 + 18 NA Intergenic Intergenic 9865 FBgn0052834 FBgn0052834 FBtr0303210 CG32834 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1421 chr2L 10134870 10134942 + 18 NA intron (FBgn0262032, intron 1 of 6) protein_coding-intron (FBgn0262032, intron 1 of 6) 2646 FBgn0262032 FBgn0262032 FBtr0303928 CG42843 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2420 chr2L 16105035 16105110 + 18 NA Intergenic Intergenic 10063 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10893 chr3R 15097811 15097879 + 18 NA Intergenic Intergenic 14857 FBgn0038695 FBgn0038695 FBtr0083738 CG14280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1621 chr2L 12187892 12187946 + 18 NA intron (FBgn0000114, intron 1 of 8) protein_coding-intron (FBgn0000114, intron 1 of 8) -10167 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3738 chr2L 22511143 22511197 + 18 NA Intergenic Intergenic 38688 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6103 chr2R 19516935 19516990 + 18 NA Intergenic Intergenic -3173 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2064 chr2L 14729875 14729929 + 18 NA promoter-TSS (FBgn0261571) protein_coding-promoter-TSS (FBgn0261571) 99 FBgn0261571 FBgn0261571 FBtr0302857 CG42685 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12610 chr3R 26842482 26842647 + 18 NA promoter-TSS (FBgn0004573) protein_coding-promoter-TSS (FBgn0004573) 5 FBgn0004573 FBgn0004573 FBtr0085746 5-HT7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2300 chr2L 15584053 15584115 + 18 NA TTS (FBgn0028370) protein_coding-TTS (FBgn0028370) 27885 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11434 chr3R 20568452 20568634 + 18 NA exon (FBgn0004885, exon 3 of 14) protein_coding-exon (FBgn0004885, exon 3 of 14) -6912 FBgn0003719 FBgn0003719 FBtr0084691 tld protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12856 chr3RHet 1111628 1111682 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_441 chr2L 2820672 2820812 + 18 NA exon (FBgn0031464, exon 4 of 10) protein_coding-exon (FBgn0031464, exon 4 of 10) 4764 FBgn0031465 FBgn0031465 FBtr0077723 CG3123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9022 chr3R 961571 961717 + 18 NA Intergenic Intergenic 1651 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13281 chrU 8228539 8228751 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1383 chr2L 9818206 9818419 + 18 NA intron (FBgn0032151, intron 5 of 13) protein_coding-intron (FBgn0032151, intron 4 of 13) -25205 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1503 chr2L 11171479 11171534 + 18 NA promoter-TSS (FBgn0259822) protein_coding-promoter-TSS (FBgn0259822) 159 FBgn0014076 FBgn0014076 FBtr0080216 Vm32E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2092 chr2L 14801903 14802082 + 18 NA promoter-TSS (FBgn0250834) protein_coding-promoter-TSS (FBgn0250834) -342 FBgn0250834 FBgn0250834 FBtr0080673 CG33308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12731 chr3R 27372337 27372410 + 18 NA intron (FBgn0039852, intron 1 of 8) protein_coding-intron (FBgn0039852, intron 1 of 8) 3488 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12350 chr3R 25366873 25367069 + 18 NA Intergenic Intergenic 6613 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8317 chr3L 16932637 16932781 + 18 NA promoter-TSS (FBgn0036679) protein_coding-promoter-TSS (FBgn0036679) -657 FBgn0036679 FBgn0036679 FBtr0273313 CG13022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10621 chr3R 13262182 13262329 + 18 NA intron (FBgn0038511, intron 2 of 9) protein_coding-intron (FBgn0038511, intron 2 of 9) 4195 FBgn0038510 FBgn0038510 FBtr0113244 CG14331 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3604 chr2L 22075312 22075443 + 18 NA Intergenic Intergenic 4224 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10466 chr3R 12239669 12239723 + 18 NA Intergenic Intergenic -10284 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5084 chr2R 10578003 10578093 + 18 NA intron (FBgn0020269, intron 1 of 5) protein_coding-intron (FBgn0020269, intron 1 of 5) -12407 FBgn0050480 FBgn0050480 FBtr0087478 CG30480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7467 chr3L 9005249 9005303 + 18 NA TTS (FBgn0035956) protein_coding-TTS (FBgn0035956) -2338 FBgn0035955 FBgn0035955 FBtr0333909 CG5194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10024 chr3R 8902384 8902494 + 18 NA exon (FBgn0004666, exon 8 of 8) protein_coding-exon (FBgn0004666, exon 8 of 8) -9507 FBgn0262365 FBgn0262365 FBtr0304647 CG43063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12090 chr3R 24221192 24221291 + 18 NA Intergenic Intergenic -22689 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3977 chr2R 966569 966623 + 18 NA Intergenic Intergenic 3340 FBgn0263092 FBgn0263092 FBtr0307111 CR43360 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6082 chr2R 19301218 19301368 + 18 NA exon (FBgn0034860, exon 5 of 7) protein_coding-exon (FBgn0034860, exon 5 of 7) -2175 FBgn0050411 FBgn0050411 FBtr0072016 CG30411 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9530 chr3R 4793038 4793093 + 18 NA Intergenic Intergenic -4382 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10395 chr3R 11892698 11892947 + 18 NA exon (FBgn0038397, exon 2 of 12) protein_coding-exon (FBgn0038397, exon 2 of 12) 412 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9840 chr3R 7515497 7515833 + 18 NA promoter-TSS (FBgn0037936) protein_coding-promoter-TSS (FBgn0037936) 80 FBgn0037936 FBgn0037936 FBtr0082437 CG6908 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13692 chrX 12860448 12860502 + 18 NA Intergenic Intergenic -1467 FBgn0052644 FBgn0052644 FBtr0305599 Mur11Da protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7219 chr3L 6701814 6701919 + 18 NA exon (FBgn0035711, exon 3 of 3) protein_coding-exon (FBgn0035711, exon 3 of 3) 1181 FBgn0035711 FBgn0035711 FBtr0333072 CG8519 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13119 chrU 295041 295105 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8501 chr3L 18311490 18311630 + 18 NA Intergenic Intergenic -14043 FBgn0015946 FBgn0015946 FBtr0075130 grim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5320 chr2R 12587510 12587585 + 18 NA intron (FBgn0050463, intron 2 of 10) protein_coding-intron (FBgn0050463, intron 3 of 11) 8344 FBgn0013763 FBgn0013763 FBtr0087111 CG5210 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3404 chr2L 21398077 21398173 + 18 NA Intergenic Intergenic -5990 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10469 chr3R 12249103 12249309 + 18 NA Intergenic Intergenic 1576 FBgn0051497 FBgn0051497 FBtr0083317 tRNA:CR31497 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6985 chr3L 3260442 3260707 + 18 NA intron (FBgn0035427, intron 2 of 5) protein_coding-intron (FBgn0035427, intron 1 of 4) 2696 FBgn0035427 FBgn0035427 FBtr0073050 ckd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13155 chrU 1251105 1251296 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7006 chr3L 3682807 3682973 + 18 NA Intergenic Intergenic -5896 FBgn0263495 FBgn0263495 FBtr0309509 CR43484 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7806 chr3L 12592776 12592924 + 18 NA Intergenic Intergenic -9881 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6622 chr2RHet 2240789 2240981 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10518 chr3R 12547285 12547339 + 18 NA intron (FBgn0003944, intron 1 of 2) protein_coding-intron (FBgn0003944, intron 1 of 2) 13036 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10079 chr3R 9351887 9351959 + 18 NA Intergenic Intergenic -2666 FBgn0038157 FBgn0038157 FBtr0082791 CG12538 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2179 chr2L 15158449 15158553 + 18 NA Intergenic Intergenic -26112 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_2002 chr2L 14495856 14495910 + 18 NA promoter-TSS (FBgn0028882) tRNA-promoter-TSS (FBgn0028882) 5 FBgn0028882 FBgn0028882 FBtr0080644 tRNA:P:35Bd tRNA Nup98-S2-pascual-garcia2017_R1_peak_7809 chr3L 12608162 12608282 + 18 NA intron (FBgn0015919, intron 1 of 4) protein_coding-intron (FBgn0015919, intron 1 of 4) 5491 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11661 chr3R 22426363 22426418 + 18 NA intron (FBgn0263289, intron 26 of 26) protein_coding-intron (FBgn0263289, intron 24 of 24) -18455 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13748 chrX 15120771 15120825 + 18 NA Intergenic Intergenic 3110 FBgn0030622 FBgn0030622 FBtr0074024 CG9101 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7181 chr3L 6347404 6347576 + 18 NA Intergenic Intergenic -2000 FBgn0035699 FBgn0035699 FBtr0077007 CG13300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6101 chr2R 19506239 19506293 + 18 NA Intergenic Intergenic -9640 FBgn0034885 FBgn0034885 FBtr0306384 CG4019 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5453 chr2R 13949518 13949780 + 18 NA promoter-TSS (FBgn0085415) protein_coding-promoter-TSS (FBgn0085415) -560 FBgn0085415 FBgn0085415 FBtr0112627 CG34386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7340 chr3L 7699346 7699768 + 18 NA intron (FBgn0261788, intron 7 of 8) protein_coding-intron (FBgn0052373, intron 1 of 7) 7190 FBgn0261788 FBgn0261788 FBtr0334062 Ank2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12672 chr3R 27088977 27089085 + 18 NA exon (FBgn0040629, exon 4 of 5) protein_coding-exon (FBgn0040629, exon 4 of 5) 681 FBgn0040629 FBgn0040629 FBtr0305336 CG18673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6643 chr2RHet 2310709 2310787 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3184 chr2L 20293389 20293576 + 18 NA Intergenic Intergenic -1225 FBgn0040996 FBgn0040996 FBtr0081351 CG12617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10632 chr3R 13319710 13319764 + 18 NA intron (FBgn0261046, intron 5 of 34) protein_coding-intron (FBgn0261046, intron 6 of 34) 11652 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2924 chr2L 18736810 18736864 + 18 NA Intergenic Intergenic 3169 FBgn0261806 FBgn0261806 FBtr0303282 CG42752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11578 chr3R 22095098 22095207 + 18 NA exon (FBgn0039420, exon 4 of 8) protein_coding-exon (FBgn0039420, exon 4 of 8) 6768 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2532 chr2L 16861219 16861292 + 18 NA promoter-TSS (FBgn0264440) ncRNA-promoter-TSS (FBgn0264440) 234 FBgn0032615 FBgn0032615 FBtr0080923 CG6012 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8103 chr3L 14968119 14968267 + 18 NA promoter-TSS (FBgn0040296) protein_coding-promoter-TSS (FBgn0040296) -90 FBgn0040296 FBgn0040296 FBtr0309062 Ocho protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2590 chr2L 17056694 17056748 + 18 NA Intergenic Intergenic -8440 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9147 chr3R 2090814 2090868 + 18 NA exon (FBgn0037417, exon 2 of 4) protein_coding-exon (FBgn0037417, exon 2 of 4) 1143 FBgn0037417 FBgn0037417 FBtr0078601 Osi10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_134 chr2L 986601 986655 + 18 NA Intergenic Intergenic 40262 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5462 chr2R 14084292 14084375 + 18 NA Intergenic Intergenic -3977 FBgn0053958 FBgn0053958 FBtr0099994 CG33958 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1334 chr2L 9351151 9351324 + 18 NA TTS (FBgn0032111) protein_coding-TTS (FBgn0032111) 767 FBgn0032111 FBgn0032111 FBtr0079805 CG13110 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8237 chr3L 16268583 16268637 + 18 NA Intergenic Intergenic -1925 FBgn0036590 FBgn0036590 FBtr0075468 CG13065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5468 chr2R 14112046 14112100 + 18 NA Intergenic Intergenic -8195 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10768 chr3R 14183636 14183701 + 18 NA intron (FBgn0038606, intron 1 of 3) protein_coding-intron (FBgn0038606, intron 1 of 3) 3031 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11935 chr3R 23613522 23613600 + 18 NA intron (FBgn0085382, intron 7 of 11) protein_coding-intron (FBgn0085382, intron 7 of 11) 51299 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8211 chr3L 16068652 16068749 + 18 NA exon (FBgn0005536, exon 2 of 7) protein_coding-exon (FBgn0005536, exon 2 of 7) -6951 FBgn0053258 FBgn0053258 FBtr0301030 CG33258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9217 chr3R 2567901 2568079 + 18 NA promoter-TSS (FBgn0051481) protein_coding-promoter-TSS (FBgn0051481) -205 FBgn0051481 FBgn0051481 FBtr0089279 pb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13767 chrX 16111382 16111482 + 18 NA promoter-TSS (FBgn0000459) protein_coding-promoter-TSS (FBgn0000459) -653 FBgn0000459 FBgn0000459 FBtr0100384 disco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10796 chr3R 14348480 14348534 + 18 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 22801 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5668 chr2R 15869998 15870052 + 18 NA exon (FBgn0034479, exon 2 of 4) protein_coding-exon (FBgn0034479, exon 2 of 4) 3276 FBgn0034479 FBgn0034479 FBtr0305676 CG8654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4891 chr2R 8931617 8931831 + 18 NA Intergenic Intergenic 3069 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10945 chr3R 15436943 15437072 + 18 NA exon (FBgn0038718, exon 4 of 6) protein_coding-exon (FBgn0038718, exon 4 of 6) 1060 FBgn0038718 FBgn0038718 FBtr0083779 CG17752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9400 chr3R 3762761 3762821 + 18 NA intron (FBgn0000504, intron 2 of 4) protein_coding-intron (FBgn0000504, intron 2 of 4) 15126 FBgn0261453 FBgn0261453 FBtr0309754 scaRNA:mgU2-41 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_12860 chr3RHet 1201891 1202071 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12321 chr3R 25234087 25234204 + 18 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -71275 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6307 chr2RHet 81262 81316 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4725 chr2R 7699780 7699970 + 18 NA TTS (FBgn0033652) protein_coding-TTS (FBgn0033652) -12995 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3747 chr2L 22548645 22548732 + 18 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 76206 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6356 chr2RHet 505561 505643 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7120 chr3L 5913990 5914167 + 18 NA intron (FBgn0035649, intron 1 of 5) protein_coding-intron (FBgn0035649, intron 1 of 5) 338 FBgn0035649 FBgn0035649 FBtr0077077 CG10483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4942 chr2R 9364003 9364156 + 18 NA promoter-TSS (FBgn0262821) protein_coding-promoter-TSS (FBgn0262821) -768 FBgn0262821 FBgn0262821 FBtr0306064 CG43192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12014 chr3R 23949628 23949682 + 18 NA Intergenic Intergenic -22947 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3308 chr2L 20852332 20852412 + 18 NA promoter-TSS (FBgn0032895) protein_coding-promoter-TSS (FBgn0032895) -209 FBgn0032895 FBgn0032895 FBtr0081426 CG9335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5661 chr2R 15831090 15831211 + 18 NA TTS (FBgn0262824) protein_coding-TTS (FBgn0262824) 1294 FBgn0262824 FBgn0262824 FBtr0308771 CG43195 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5952 chr2R 18180285 18180353 + 18 NA promoter-TSS (FBgn0034717) protein_coding-promoter-TSS (FBgn0034717) -603 FBgn0034717 FBgn0034717 FBtr0071812 CG5819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11849 chr3R 23254658 23254802 + 18 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 8474 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1640 chr2L 12366297 12366398 + 18 NA promoter-TSS (FBgn0262475) protein_coding-promoter-TSS (FBgn0262475) 9906 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3172 chr2L 20240692 20240902 + 18 NA Intergenic Intergenic -7426 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5708 chr2R 16116408 16116601 + 18 NA promoter-TSS (FBgn0011869) tRNA-promoter-TSS (FBgn0011869) -482 FBgn0011869 FBgn0011869 FBtr0086312 tRNA:G3:56EFa tRNA Nup98-S2-pascual-garcia2017_R1_peak_4151 chr2R 3308737 3308829 + 18 NA intron (FBgn0003460, intron 1 of 6) protein_coding-intron (FBgn0003460, intron 1 of 6) 2246 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11035 chr3R 15928656 15928765 + 18 NA Intergenic Intergenic 5013 FBgn0051206 FBgn0051206 FBtr0083875 CG31206 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10892 chr3R 15092941 15093025 + 18 NA Intergenic Intergenic 9995 FBgn0038695 FBgn0038695 FBtr0083738 CG14280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11539 chr3R 21893098 21893491 + 18 NA Intergenic Intergenic -4561 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9116 chr3R 1873880 1874025 + 18 NA Intergenic Intergenic 9307 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1507 chr2L 11198813 11198867 + 18 NA intron (FBgn0259822, intron 2 of 11) protein_coding-intron (FBgn0259822, intron 2 of 11) 7252 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4853 chr2R 8692255 8692631 + 18 NA Intergenic Intergenic -1739 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11331 chr3R 18693145 18693316 + 18 NA Intergenic Intergenic -15704 FBgn0264428 FBgn0264428 FBtr0332548 CR43846 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4851 chr2R 8688317 8688456 + 18 NA exon (FBgn0003326, exon 4 of 4) protein_coding-exon (FBgn0003326, exon 4 of 4) -5796 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10773 chr3R 14225364 14225457 + 18 NA promoter-TSS (FBgn0028670) protein_coding-promoter-TSS (FBgn0028670) -45 FBgn0051232 FBgn0051232 FBtr0083629 koko protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5852 chr2R 17446915 17446970 + 18 NA TTS (FBgn0003731) protein_coding-TTS (FBgn0003731) 11868 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9978 chr3R 8627948 8628111 + 18 NA Intergenic Intergenic 14722 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6870 chr3L 1847571 1847656 + 18 NA Intergenic Intergenic -5529 FBgn0035281 FBgn0035281 FBtr0332673 Cpr62Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6035 chr2R 18919083 18919137 + 18 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) 11352 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10298 chr3R 11260218 11260450 + 18 NA promoter-TSS (FBgn0038339) protein_coding-promoter-TSS (FBgn0038339) -428 FBgn0038339 FBgn0038339 FBtr0113239 CG6118 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11045 chr3R 15979463 15979555 + 18 NA Intergenic Intergenic -13866 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1073 chr2L 8475758 8475964 + 18 NA intron (FBgn0262029, intron 1 of 8) protein_coding-intron (FBgn0262029, intron 1 of 8) -1488 FBgn0053194 FBgn0053194 FBtr0079676 CheA29a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_105 chr2L 903572 903626 + 18 NA Intergenic Intergenic -1945 FBgn0003916 FBgn0003916 FBtr0078028 snRNA:U1:21D snRNA Nup98-S2-pascual-garcia2017_R1_peak_4638 chr2R 7159138 7159308 + 18 NA intron (FBgn0033603, intron 1 of 15) protein_coding-intron (FBgn0033603, intron 1 of 16) 796 FBgn0033603 FBgn0033603 FBtr0302719 Cpr47Ef protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11214 chr3R 17294080 17294178 + 18 NA Intergenic Intergenic 2706 FBgn0263407 FBgn0263407 FBtr0309186 CR43453 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8881 chr3LHet 1075262 1075404 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13056 chrU 72796 72879 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1471 chr2L 10807667 10807879 + 18 NA intron (FBgn0011676, intron 13 of 17) protein_coding-intron (FBgn0011676, intron 14 of 18) -6927 FBgn0051869 FBgn0051869 FBtr0290246 CG31869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12187 chr3R 24576440 24576823 + 18 NA exon (FBgn0039596, exon 4 of 7) protein_coding-exon (FBgn0039596, exon 4 of 7) 682 FBgn0039596 FBgn0039596 FBtr0085315 CG10000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9667 chr3R 6092857 6093013 + 18 NA intron (FBgn0262617, intron 1 of 13) protein_coding-intron (FBgn0262617, intron 1 of 11) 5101 FBgn0040078 FBgn0040078 FBtr0082226 pont protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10570 chr3R 12790857 12790911 + 18 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -10042 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7122 chr3L 5930679 5930809 + 18 NA exon (FBgn0053993, exon 3 of 6) protein_coding-exon (FBgn0053993, exon 3 of 6) -2341 FBgn0053993 FBgn0053993 FBtr0301034 CG33993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12385 chr3R 25473317 25473439 + 18 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 12328 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6100 chr2R 19468228 19468454 + 18 NA promoter-TSS (FBgn0015903) protein_coding-promoter-TSS (FBgn0015903) -15774 FBgn0015903 FBgn0015903 FBtr0332926 apt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1920 chr2L 14300979 14301046 + 18 NA promoter-TSS (FBgn0261563) protein_coding-promoter-TSS (FBgn0261563) -5618 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11861 chr3R 23290119 23290410 + 18 NA exon (FBgn0039518, exon 1 of 2) protein_coding-exon (FBgn0039518, exon 1 of 2) 353 FBgn0039518 FBgn0039518 FBtr0085182 CG13978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5617 chr2R 15515314 15515526 + 18 NA intron (FBgn0003435, intron 2 of 10) protein_coding-intron (FBgn0003435, intron 2 of 9) -7364 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_29 chr2L 359098 359286 + 18 NA Intergenic Intergenic -1318 FBgn0031250 FBgn0031250 FBtr0330651 Ent1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12627 chr3R 26925917 26925988 + 18 NA exon (FBgn0039817, exon 5 of 10) protein_coding-exon (FBgn0039817, exon 5 of 10) 939 FBgn0039817 FBgn0039817 FBtr0290201 CG15553 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1455 chr2L 10682119 10682208 + 18 NA TTS (FBgn0032280) protein_coding-TTS (FBgn0032280) 188 FBgn0032281 FBgn0032281 FBtr0080107 CG17107 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12388 chr3R 25478476 25478666 + 18 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 7135 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6927 chr3L 2412598 2412705 + 18 NA intron (FBgn0261551, intron 1 of 9) protein_coding-intron (FBgn0261551, intron 1 of 9) -5304 FBgn0261551 FBgn0261551 FBtr0302675 CG42669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2409 chr2L 16078415 16078469 + 18 NA intron (FBgn0013433, intron 5 of 7) protein_coding-intron (FBgn0013433, intron 5 of 7) -16567 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2037 chr2L 14616737 14617145 + 18 NA intron (FBgn0000055, intron 3 of 3) protein_coding-intron (FBgn0000056, intron 3 of 5) 672 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12749 chr3R 27476742 27476796 + 18 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) -18418 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5276 chr2R 12283177 12283402 + 18 NA intron (FBgn0264273, intron 1 of 15) protein_coding-intron (FBgn0264273, intron 1 of 15) 9260 FBgn0264273 FBgn0264273 FBtr0100001 Sema-2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12136 chr3R 24389667 24389721 + 18 NA Intergenic Intergenic -19170 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5736 chr2R 16386813 16386997 + 18 NA Intergenic Intergenic -4215 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10190 chr3R 10226552 10226612 + 18 NA intron (FBgn0086901, intron 9 of 15) protein_coding-intron (FBgn0086901, intron 8 of 14) -4417 FBgn0262327 FBgn0262327 FBtr0304502 mir-2281 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2783 chr2L 17908834 17909041 + 18 NA Intergenic Intergenic 6086 FBgn0262960 FBgn0262960 FBtr0306713 CG43271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4737 chr2R 7718456 7718643 + 18 NA intron (FBgn0033654, intron 2 of 3) protein_coding-intron (FBgn0033654, intron 2 of 3) 5679 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10264 chr3R 10946842 10946990 + 18 NA intron (FBgn0261859, intron 1 of 9) protein_coding-intron (FBgn0261859, intron 1 of 9) 9598 FBgn0262315 FBgn0262315 FBtr0304477 mir-2493 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_925 chr2L 6816157 6816222 + 18 NA Intergenic Intergenic -6128 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1028 chr2L 7919105 7919171 + 18 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -28544 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13795 chrX 17938349 17938535 + 18 NA exon (FBgn0030889, exon 2 of 11) protein_coding-exon (FBgn0030889, exon 2 of 11) 338 FBgn0030889 FBgn0030889 FBtr0112999 CG15373 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9771 chr3R 6873700 6873856 + 18 NA exon (FBgn0083950, exon 16 of 16) protein_coding-exon (FBgn0083950, exon 16 of 16) -40364 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4030 chr2R 1950688 1950742 + 18 NA intron (FBgn0033058, intron 2 of 6) protein_coding-intron (FBgn0033058, intron 2 of 7) -3652 FBgn0033056 FBgn0033056 FBtr0086024 CG7856 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6866 chr3L 1824467 1824689 + 18 NA exon (FBgn0035279, exon 3 of 3) protein_coding-exon (FBgn0035279, exon 3 of 3) 4364 FBgn0035279 FBgn0035279 FBtr0299561 Cpr62Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12297 chr3R 25160818 25160946 + 18 NA Intergenic Intergenic -15546 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12577 chr3R 26734937 26735026 + 18 NA Intergenic Intergenic -3629 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3850 chr2L 22908176 22908273 + 18 NA exon (FBgn0250907, exon 4 of 9) protein_coding-exon (FBgn0250907, exon 4 of 9) 10336 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6680 chr2RHet 2990251 2990327 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5484 chr2R 14191338 14191392 + 18 NA exon (FBgn0034327, exon 1 of 2) protein_coding-exon (FBgn0034327, exon 1 of 2) 117 FBgn0034327 FBgn0034327 FBtr0307186 CG14505 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9576 chr3R 5140040 5140235 + 18 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -7355 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7576 chr3L 10608170 10608339 + 18 NA Intergenic Intergenic 8422 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10461 chr3R 12229154 12229372 + 18 NA exon (FBgn0003513, exon 1 of 8) protein_coding-exon (FBgn0003513, exon 1 of 8) 149 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2383 chr2L 16005953 16006009 + 18 NA TTS (FBgn0045827) protein_coding-TTS (FBgn0045827) 298 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1007 chr2L 7613472 7613526 + 18 NA exon (FBgn0031926, exon 2 of 6) protein_coding-exon (FBgn0031926, exon 2 of 6) 5109 FBgn0031926 FBgn0031926 FBtr0079472 CG6739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_577 chr2L 4012932 4012986 + 18 NA Intergenic Intergenic 4306 FBgn0264296 FBgn0264296 FBtr0331499 CG43774 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8840 chr3L 24370912 24370966 + 18 NA intron (FBgn0259697, intron 3 of 5) protein_coding-intron (FBgn0259697, intron 3 of 5) 52972 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11076 chr3R 16173990 16174057 + 18 NA Intergenic Intergenic 9034 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6578 chr2RHet 1967390 1967639 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1626 chr2L 12279473 12279535 + 18 NA intron (FBgn0000114, intron 3 of 8) protein_coding-intron (FBgn0000114, intron 4 of 11) -59344 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8343 chr3L 17156173 17156227 + 18 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -3763 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1570 chr2L 11766308 11766362 + 18 NA Intergenic Intergenic -11833 FBgn0259962 FBgn0259962 FBtr0300306 Sfp33A1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1917 chr2L 14296687 14297153 + 18 NA intron (FBgn0261563, intron 4 of 12) protein_coding-intron (FBgn0261563, intron 4 of 15) -1526 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7810 chr3L 12609896 12610083 + 18 NA exon (FBgn0015919, exon 2 of 5) protein_coding-exon (FBgn0015919, exon 2 of 5) 7258 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11594 chr3R 22137274 22137429 + 18 NA Intergenic Intergenic 13646 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1018 chr2L 7866004 7866105 + 18 NA exon (FBgn0045038, exon 3 of 3) protein_coding-exon (FBgn0045038, exon 3 of 3) -5216 FBgn0031957 FBgn0031957 FBtr0079563 TwdlE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6631 chr2RHet 2260547 2260749 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3859 chr2L 22939390 22939640 + 18 NA Intergenic Intergenic -20955 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2304 chr2L 15594923 15594977 + 18 NA Intergenic Intergenic 17019 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12985 chr4 941612 941770 + 18 NA exon (FBgn0023213, exon 8 of 16) protein_coding-exon (FBgn0023213, exon 8 of 16) 9656 FBgn0023213 FBgn0023213 FBtr0289951 eIF4G protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3893 chr2LHet 344546 344619 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11943 chr3R 23635167 23635433 + 18 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -35511 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5243 chr2R 11940876 11940934 + 18 NA intron (FBgn0034071, intron 10 of 12) protein_coding-intron (FBgn0034071, intron 10 of 12) 5728 FBgn0034071 FBgn0034071 FBtr0087210 CG8405 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12990 chr4 961348 961893 + 18 NA intron (FBgn0019985, intron 3 of 5) protein_coding-intron (FBgn0019985, intron 3 of 8) 4175 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12940 chr4 554886 555445 + 18 NA exon (FBgn0004607, exon 11 of 14) protein_coding-exon (FBgn0004607, exon 11 of 14) 23315 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2232 chr2L 15388096 15388198 + 18 NA Intergenic Intergenic -26520 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1460 chr2L 10700765 10700819 + 18 NA exon (FBgn0023496, exon 2 of 5) protein_coding-exon (FBgn0023496, exon 2 of 5) 666 FBgn0023496 FBgn0023496 FBtr0080124 Lip1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9045 chr3R 1236538 1236614 + 18 NA promoter-TSS (FBgn0037324) protein_coding-promoter-TSS (FBgn0037324) 1552 FBgn0037324 FBgn0037324 FBtr0078794 Orco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9320 chr3R 3126409 3126528 + 18 NA exon (FBgn0259172, exon 2 of 8) protein_coding-exon (FBgn0259172, exon 2 of 8) -3846 FBgn0260713 FBgn0260713 FBtr0301214 CG42544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1385 chr2L 9841223 9841286 + 18 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) -7035 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11235 chr3R 17517884 17517938 + 18 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) -20439 FBgn0259113 FBgn0259113 FBtr0084115 DNApol-alpha180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13775 chrX 16677938 16678034 + 18 NA promoter-TSS (FBgn0030786) protein_coding-promoter-TSS (FBgn0030786) -1 FBgn0030786 FBgn0030786 FBtr0074330 mRpL22 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9431 chr3R 3992685 3992762 + 18 NA exon (FBgn0001138, exon 4 of 9) protein_coding-exon (FBgn0001138, exon 4 of 9) 14441 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9758 chr3R 6790847 6790901 + 18 NA Intergenic Intergenic 14868 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10148 chr3R 9824619 9824678 + 18 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 27033 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6614 chr2RHet 2201871 2202098 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4912 chr2R 9161339 9161393 + 18 NA exon (FBgn0052843, exon 6 of 11) protein_coding-exon (FBgn0052843, exon 6 of 11) 11376 FBgn0259219 FBgn0259219 FBtr0299738 CG42319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5623 chr2R 15531738 15531792 + 18 NA TTS (FBgn0034461) protein_coding-TTS (FBgn0034461) 1313 FBgn0034461 FBgn0034461 FBtr0086470 CG15124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10041 chr3R 9066256 9066778 + 18 NA intron (FBgn0000024, intron 6 of 10) protein_coding-intron (FBgn0000024, intron 5 of 9) 18723 FBgn0000024 FBgn0000024 FBtr0082780 Ace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8617 chr3L 20791693 20791775 + 18 NA promoter-TSS (FBgn0037024) protein_coding-promoter-TSS (FBgn0037024) -48 FBgn0037024 FBgn0037024 FBtr0078253 CG4365 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9728 chr3R 6527193 6527330 + 18 NA exon (FBgn0020385, exon 5 of 6) protein_coding-exon (FBgn0020385, exon 5 of 6) 3536 FBgn0051391 FBgn0051391 FBtr0082321 CG31391 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12802 chr3R 27759241 27759339 + 18 NA exon (FBgn0011224, exon 2 of 12) protein_coding-exon (FBgn0011224, exon 2 of 12) 47601 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6582 chr2RHet 1986957 1987453 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8126 chr3L 15254234 15254299 + 18 NA Intergenic Intergenic 25547 FBgn0029114 FBgn0029114 FBtr0075607 Tollo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9841 chr3R 7517029 7517168 + 18 NA exon (FBgn0042110, exon 2 of 4) protein_coding-exon (FBgn0042110, exon 2 of 4) 423 FBgn0042110 FBgn0042110 FBtr0113346 CG18765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3033 chr2L 19463060 19463153 + 18 NA Intergenic Intergenic -1161 FBgn0000964 FBgn0000964 FBtr0329891 tj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11894 chr3R 23451440 23451494 + 18 NA exon (FBgn0039529, exon 1 of 4) protein_coding-exon (FBgn0039529, exon 1 of 4) 264 FBgn0039529 FBgn0039529 FBtr0085200 CG5612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12620 chr3R 26887151 26887283 + 18 NA promoter-TSS (FBgn0002413) protein_coding-promoter-TSS (FBgn0002413) -614 FBgn0002413 FBgn0002413 FBtr0085744 dco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5293 chr2R 12394108 12394162 + 18 NA intron (FBgn0011260, intron 2 of 14) protein_coding-intron (FBgn0011260, intron 2 of 14) -7201 FBgn0034133 FBgn0034133 FBtr0087126 CG7813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6615 chr2RHet 2202789 2203445 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10470 chr3R 12257531 12257755 + 18 NA promoter-TSS (FBgn0051282) tRNA-promoter-TSS (FBgn0051282) -19 FBgn0051282 FBgn0051282 FBtr0083285 tRNA:CR31282 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11341 chr3R 18861331 18861397 + 18 NA promoter-TSS (FBgn0039040) protein_coding-promoter-TSS (FBgn0039040) -79 FBgn0039040 FBgn0039040 FBtr0084362 CG13833 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6626 chr2RHet 2244493 2244736 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9814 chr3R 7198848 7199126 + 18 NA exon (FBgn0004595, exon 4 of 8) protein_coding-exon (FBgn0004595, exon 4 of 8) -20134 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13059 chrU 78070 78124 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9236 chr3R 2626878 2627062 + 18 NA exon (FBgn0000439, exon 4 of 5) protein_coding-exon (FBgn0000439, exon 4 of 5) 8286 FBgn0262424 FBgn0262424 FBtr0304381 mir-10 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6577 chr2RHet 1966528 1966698 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7086 chr3L 5349424 5349523 + 18 NA promoter-TSS (FBgn0052420) tRNA-promoter-TSS (FBgn0052420) 30 FBgn0052420 FBgn0052420 FBtr0077143 tRNA:CR32420 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6343 chr2RHet 444459 444723 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1449 chr2L 10648181 10648278 + 18 NA exon (FBgn0032275, exon 2 of 5) protein_coding-exon (FBgn0032275, exon 2 of 5) 1794 FBgn0032275 FBgn0032275 FBtr0110819 CG17097 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3601 chr2L 22073474 22073540 + 18 NA TTS (FBgn0051702) protein_coding-TTS (FBgn0051702) 2354 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4078 chr2R 2720202 2720308 + 18 NA promoter-TSS (FBgn0085244) protein_coding-promoter-TSS (FBgn0085244) -959 FBgn0085244 FBgn0085244 FBtr0112408 CG34215 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9819 chr3R 7217633 7217687 + 18 NA exon (FBgn0004595, exon 8 of 8) protein_coding-exon (FBgn0004595, exon 8 of 8) -15959 FBgn0037892 FBgn0037892 FBtr0082384 mRpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7990 chr3L 13975527 13975581 + 18 NA exon (FBgn0036391, exon 6 of 6) protein_coding-exon (FBgn0036391, exon 6 of 6) -4166 FBgn0036393 FBgn0036393 FBtr0333024 CG17362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4838 chr2R 8584705 8584781 + 18 NA Intergenic Intergenic -2843 FBgn0033770 FBgn0033770 FBtr0113076 wuc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2726 chr2L 17695794 17695848 + 18 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -8860 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10172 chr3R 10078267 10078321 + 18 NA intron (FBgn0027083, intron 5 of 5) protein_coding-intron (FBgn0027083, intron 5 of 5) -3394 FBgn0262808 FBgn0262808 FBtr0306052 CG43179 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5653 chr2R 15779279 15779335 + 18 NA Intergenic Intergenic -10882 FBgn0034477 FBgn0034477 FBtr0086341 CG13872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1819 chr2L 13590447 13590601 + 18 NA intron (FBgn0259984, intron 4 of 13) protein_coding-intron (FBgn0259984, intron 3 of 12) 6662 FBgn0028513 FBgn0028513 FBtr0080512 CG9254 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5127 chr2R 10921359 10921413 + 18 NA intron (FBgn0029082, intron 1 of 11) protein_coding-intron (FBgn0029082, intron 1 of 11) -9042 FBgn0043530 FBgn0043530 FBtr0087420 Obp51a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2022 chr2L 14570232 14570384 + 18 NA Intergenic Intergenic -6582 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12931 chr4 543564 543766 + 18 NA exon (FBgn0004607, exon 4 of 14) protein_coding-exon (FBgn0004607, exon 4 of 14) 21229 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11192 chr3R 17170553 17170734 + 18 NA intron (FBgn0038881, intron 1 of 14) protein_coding-intron (FBgn0038881, intron 1 of 14) 4663 FBgn0038881 FBgn0038881 FBtr0084095 CG16791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5799 chr2R 17007516 17007676 + 18 NA exon (FBgn0034588, exon 1 of 1) protein_coding-exon (FBgn0034588, exon 1 of 1) 1697 FBgn0034588 FBgn0034588 FBtr0071567 CG9394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2487 chr2L 16559263 16559547 + 18 NA exon (FBgn0259735, exon 2 of 3) protein_coding-exon (FBgn0259735, exon 2 of 3) -9446 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3735 chr2L 22493123 22493177 + 18 NA Intergenic Intergenic 20668 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2421 chr2L 16106297 16106426 + 18 NA Intergenic Intergenic 11352 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9001 chr3R 788504 788577 + 18 NA Intergenic Intergenic -1481 FBgn0250839 FBgn0250839 FBtr0305964 CG2016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9549 chr3R 5074620 5074917 + 18 NA intron (FBgn0037664, intron 3 of 5) protein_coding-intron (FBgn0037664, intron 2 of 4) 2397 FBgn0037664 FBgn0037664 FBtr0081973 CG8420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11767 chr3R 22880544 22880774 + 18 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) 5717 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7804 chr3L 12590758 12590939 + 18 NA Intergenic Intergenic -11883 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9785 chr3R 6966060 6966271 + 18 NA TTS (FBgn0037862) protein_coding-TTS (FBgn0037862) 3266 FBgn0037862 FBgn0037862 FBtr0082336 CG4706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11640 chr3R 22307493 22307550 + 18 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 15726 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2816 chr2L 18001384 18001444 + 18 NA Intergenic Intergenic -5265 FBgn0040989 FBgn0040989 FBtr0081026 CG5693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12529 chr3R 26342384 26342438 + 18 NA TTS (FBgn0027654) protein_coding-TTS (FBgn0027654) 1865 FBgn0039784 FBgn0039784 FBtr0085657 CG9698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11164 chr3R 16819112 16819283 + 18 NA exon (FBgn0013995, exon 2 of 9) protein_coding-exon (FBgn0013995, exon 2 of 9) -5539 FBgn0263400 FBgn0263400 FBtr0309177 CG43446 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1957 chr2L 14385476 14385618 + 18 NA Intergenic Intergenic -4377 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2914 chr2L 18672949 18673081 + 18 NA TTS (FBgn0261349) protein_coding-TTS (FBgn0261349) 270 FBgn0263078 FBgn0263078 FBtr0306920 CG43339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9421 chr3R 3958438 3958642 + 18 NA Intergenic Intergenic 6204 FBgn0037551 FBgn0037551 FBtr0081794 Gie protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5350 chr2R 13053709 13053785 + 18 NA exon (FBgn0034204, exon 2 of 2) protein_coding-exon (FBgn0034204, exon 2 of 2) 401 FBgn0034204 FBgn0034204 FBtr0086997 CG10953 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1645 chr2L 12386936 12387126 + 18 NA intron (FBgn0262475, intron 6 of 9) protein_coding-intron (FBgn0262475, intron 6 of 9) -11243 FBgn0041195 FBgn0041195 FBtr0080365 Pkd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9276 chr3R 2837079 2837133 + 18 NA Intergenic Intergenic -40951 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7327 chr3L 7594698 7594814 + 18 NA intron (FBgn0035802, intron 1 of 16) protein_coding-intron (FBgn0035802, intron 1 of 16) 4426 FBgn0035802 FBgn0035802 FBtr0089851 CG33275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1604 chr2L 12089485 12089557 + 18 NA Intergenic Intergenic -4143 FBgn0003145 FBgn0003145 FBtr0080299 prd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3120 chr2L 19888660 19888722 + 18 NA intron (FBgn0263873, intron 3 of 15) protein_coding-intron (FBgn0263873, intron 4 of 15) 3859 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5496 chr2R 14359274 14359328 + 18 NA intron (FBgn0028496, intron 7 of 18) protein_coding-intron (FBgn0028496, intron 7 of 18) -17334 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13053 chrU 65936 66139 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12224 chr3R 24697719 24697777 + 18 NA promoter-TSS (FBgn0039609) protein_coding-promoter-TSS (FBgn0039609) -879 FBgn0039609 FBgn0039609 FBtr0085328 CG14529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_548 chr2L 3746654 3746774 + 18 NA exon (FBgn0031568, exon 2 of 12) protein_coding-exon (FBgn0031568, exon 2 of 12) -10542 FBgn0263846 FBgn0263846 FBtr0321309 CG43707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12595 chr3R 26780890 26780944 + 18 NA Intergenic Intergenic -4612 FBgn0039812 FBgn0039812 FBtr0085731 CG15548 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1642 chr2L 12376806 12376861 + 18 NA intron (FBgn0262475, intron 2 of 6) protein_coding-intron (FBgn0262475, intron 5 of 9) 20392 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10635 chr3R 13343600 13343687 + 18 NA Intergenic Intergenic -12254 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5939 chr2R 18107340 18107424 + 18 NA exon (FBgn0050277, exon 4 of 6) protein_coding-exon (FBgn0050277, exon 4 of 6) 1011 FBgn0050277 FBgn0050277 FBtr0071779 Oatp58Da protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13613 chrX 8647888 8647954 + 18 NA Intergenic Intergenic 29214 FBgn0262989 FBgn0262989 FBtr0306827 CR43297 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1809 chr2L 13475627 13475681 + 18 NA exon (FBgn0263354, exon 4 of 9) protein_coding-exon (FBgn0263354, exon 4 of 9) 13880 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10243 chr3R 10766731 10766804 + 18 NA Intergenic Intergenic 22365 FBgn0038279 FBgn0038279 FBtr0083004 CG3837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9310 chr3R 3093426 3093633 + 18 NA exon (FBgn0028400, exon 3 of 5) protein_coding-exon (FBgn0028400, exon 3 of 5) 1746 FBgn0028400 FBgn0028400 FBtr0081578 Syt4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2356 chr2L 15892617 15892785 + 18 NA exon (FBgn0041183, exon 2 of 9) protein_coding-exon (FBgn0041183, exon 2 of 9) 1110 FBgn0041183 FBgn0041183 FBtr0080811 TepI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7596 chr3L 10709867 10710136 + 18 NA Intergenic Intergenic -20024 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11783 chr3R 23026859 23027069 + 18 NA Intergenic Intergenic -7248 FBgn0004197 FBgn0004197 FBtr0085128 Ser protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4870 chr2R 8796631 8796787 + 18 NA Intergenic Intergenic -6793 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_402 chr2L 2499003 2499134 + 18 NA TTS (FBgn0011818) protein_coding-TTS (FBgn0011818) 6113 FBgn0011818 FBgn0011818 FBtr0077779 oaf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13587 chrX 7185334 7185388 + 18 NA promoter-TSS (FBgn0025549) protein_coding-promoter-TSS (FBgn0025549) -24 FBgn0025549 FBgn0025549 FBtr0071066 unc-119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7126 chr3L 5953703 5953757 + 18 NA Intergenic Intergenic 15377 FBgn0035656 FBgn0035656 FBtr0332041 CG10479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8985 chr3R 681566 681677 + 18 NA intron (FBgn0003002, intron 1 of 2) protein_coding-intron (FBgn0003002, intron 1 of 2) 3086 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_21 chr2L 309942 309996 + 18 NA promoter-TSS (FBgn0004611) protein_coding-promoter-TSS (FBgn0004611) -231 FBgn0004611 FBgn0004611 FBtr0330674 Plc21C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9457 chr3R 4218945 4219072 + 18 NA intron (FBgn0263416, intron 11 of 15) protein_coding-intron (FBgn0263416, intron 11 of 15) -5084 FBgn0051462 FBgn0051462 FBtr0081851 CG31462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3458 chr2L 21773216 21773474 + 18 NA exon (FBgn0051612, exon 2 of 4) protein_coding-exon (FBgn0051612, exon 2 of 4) 10720 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4966 chr2R 9563668 9563722 + 18 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 8454 FBgn0033864 FBgn0033864 FBtr0087627 CG18368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9907 chr3R 8063508 8063671 + 18 NA promoter-TSS (FBgn0038006) protein_coding-promoter-TSS (FBgn0038006) -963 FBgn0038006 FBgn0038006 FBtr0308561 Cyp313a2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11421 chr3R 20370185 20370256 + 18 NA promoter-TSS (FBgn0039208) protein_coding-promoter-TSS (FBgn0039208) -1073 FBgn0039207 FBgn0039207 FBtr0306025 CG5789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5227 chr2R 11796344 11796552 + 18 NA intron (FBgn0264089, intron 1 of 20) protein_coding-intron (FBgn0264089, intron 1 of 19) -12516 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6206 chr2R 20336017 20336157 + 18 NA Intergenic Intergenic 3064 FBgn0035005 FBgn0035005 FBtr0072293 CG3483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3550 chr2L 21976244 21976438 + 18 NA Intergenic Intergenic 16592 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5497 chr2R 14360077 14360134 + 18 NA intron (FBgn0028496, intron 7 of 18) protein_coding-intron (FBgn0028496, intron 7 of 18) -18138 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7452 chr3L 8815142 8815196 + 18 NA Intergenic Intergenic -5436 FBgn0263930 FBgn0263930 FBtr0076583 dally protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6177 chr2R 20201711 20201776 + 18 NA Intergenic Intergenic 8338 FBgn0003888 FBgn0003888 FBtr0072270 betaTub60D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8726 chr3L 23344214 23344268 + 18 NA Intergenic Intergenic 11815 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10880 chr3R 15008592 15008649 + 18 NA intron (FBgn0051475, intron 1 of 3) protein_coding-intron (FBgn0051475, intron 1 of 3) 2239 FBgn0051475 FBgn0051475 FBtr0332539 CG31475 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1250 chr2L 8874208 8874262 + 18 NA Intergenic Intergenic 7468 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_961 chr2L 7118998 7119054 + 18 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) 14501 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7459 chr3L 8971860 8972008 + 18 NA intron (FBgn0035948, intron 1 of 2) protein_coding-intron (FBgn0035948, intron 1 of 2) 1046 FBgn0035948 FBgn0035948 FBtr0076556 CG5644 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3285 chr2L 20720038 20720168 + 18 NA Intergenic Intergenic -5687 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8048 chr3L 14420435 14420678 + 18 NA promoter-TSS (FBgn0087007) protein_coding-promoter-TSS (FBgn0087007) 16830 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11807 chr3R 23152411 23152687 + 18 NA Intergenic Intergenic 4055 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8322 chr3L 17003253 17003511 + 18 NA intron (FBgn0036684, intron 1 of 6) protein_coding-intron (FBgn0036684, intron 1 of 6) 5769 FBgn0036685 FBgn0036685 FBtr0332121 CG6664 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1227 chr2L 8844683 8844775 + 18 NA Intergenic Intergenic -18047 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1962 chr2L 14390076 14390130 + 18 NA TTS (FBgn0004858) protein_coding-TTS (FBgn0004858) -8933 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3194 chr2L 20378573 20378627 + 18 NA exon (FBgn0032856, exon 4 of 6) protein_coding-exon (FBgn0032856, exon 4 of 6) 3755 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9673 chr3R 6199053 6199123 + 18 NA intron (FBgn0020379, intron 1 of 10) protein_coding-intron (FBgn0020379, intron 1 of 10) 4702 FBgn0020379 FBgn0020379 FBtr0305997 Rfx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1354 chr2L 9551257 9551335 + 18 NA promoter-TSS (FBgn0032129) protein_coding-promoter-TSS (FBgn0032129) 5485 FBgn0032127 FBgn0032127 FBtr0273329 CG13114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1715 chr2L 12805439 12805508 + 18 NA Intergenic Intergenic 2867 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7695 chr3L 11838766 11838821 + 18 NA Intergenic Intergenic 2110 FBgn0040816 FBgn0040816 FBtr0076074 CG12521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13037 chrM 5192 5370 + 18 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2206 chr2L 15239719 15239900 + 18 NA intron (FBgn0028516, intron 3 of 6) protein_coding-intron (FBgn0028516, intron 5 of 8) 6109 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_635 chr2L 4426222 4426280 + 18 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -7203 FBgn0051963 FBgn0051963 FBtr0077458 tRNA:CR31963 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7463 chr3L 8997965 8998128 + 18 NA promoter-TSS (FBgn0035954) protein_coding-promoter-TSS (FBgn0035954) -250 FBgn0035954 FBgn0035954 FBtr0076521 Doc3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5721 chr2R 16234659 16234842 + 18 NA exon (FBgn0042198, exon 1 of 1) protein_coding-exon (FBgn0042198, exon 1 of 1) 209 FBgn0042198 FBgn0042198 FBtr0086289 CG16741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1899 chr2L 14248740 14248890 + 18 NA Intergenic Intergenic -14212 FBgn0261563 FBgn0261563 FBtr0302735 wb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_960 chr2L 7114689 7114743 + 18 NA intron (FBgn0085407, intron 1 of 4) protein_coding-intron (FBgn0085407, intron 2 of 5) 18811 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11247 chr3R 17578648 17578881 + 18 NA exon (FBgn0051233, exon 4 of 4) protein_coding-exon (FBgn0051233, exon 4 of 4) -1282 FBgn0051198 FBgn0051198 FBtr0084128 CG31198 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13212 chrU 2415225 2415509 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_88 chr2L 794859 794939 + 17 NA Intergenic Intergenic -4101 FBgn0000442 FBgn0000442 FBtr0078042 Pkg21D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10597 chr3R 13077723 13077874 + 17 NA Intergenic Intergenic -4200 FBgn0038494 FBgn0038494 FBtr0083411 beat-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7265 chr3L 6987065 6987374 + 17 NA exon (FBgn0045759, exon 4 of 4) protein_coding-exon (FBgn0045759, exon 4 of 4) 3497 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10250 chr3R 10816287 10816498 + 17 NA Intergenic Intergenic -24100 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9011 chr3R 871109 871281 + 17 NA exon (FBgn0263626, exon 2 of 2) ncRNA-exon (FBgn0263626, exon 2 of 2) 475 FBgn0263626 FBgn0263626 FBtr0309991 CR43635 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11179 chr3R 16982024 16982097 + 17 NA promoter-TSS (FBgn0264357) protein_coding-promoter-TSS (FBgn0264357) -24 FBgn0264357 FBgn0264357 FBtr0110937 SNF4Agamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5472 chr2R 14124313 14124390 + 17 NA TTS (FBgn0000658) protein_coding-TTS (FBgn0000658) 4083 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3014 chr2L 19318252 19318324 + 17 NA Intergenic Intergenic 17982 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7580 chr3L 10614243 10614474 + 17 NA Intergenic Intergenic 2318 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8455 chr3L 17974163 17974217 + 17 NA intron (FBgn0000568, intron 4 of 7) protein_coding-intron (FBgn0000568, intron 2 of 5) 21988 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6409 chr2RHet 759865 760135 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9295 chr3R 3000005 3000089 + 17 NA exon (FBgn0002306, exon 3 of 10) protein_coding-exon (FBgn0002306, exon 3 of 10) 11496 FBgn0002306 FBgn0002306 FBtr0081571 sas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7270 chr3L 7011462 7011516 + 17 NA intron (FBgn0260660, intron 1 of 18) protein_coding-intron (FBgn0260660, intron 4 of 21) 8405 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7953 chr3L 13723175 13723382 + 17 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 73222 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11744 chr3R 22768833 22769039 + 17 NA exon (FBgn0015541, exon 7 of 12) protein_coding-exon (FBgn0015541, exon 7 of 12) -2320 FBgn0039462 FBgn0039462 FBtr0085067 CG14252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_970 chr2L 7165978 7166032 + 17 NA Intergenic Intergenic -16231 FBgn0031893 FBgn0031893 FBtr0113028 CG4495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12685 chr3R 27166297 27166477 + 17 NA intron (FBgn0085376, intron 2 of 7) protein_coding-intron (FBgn0085376, intron 2 of 16) 29491 FBgn0085376 FBgn0085376 FBtr0301051 CG34347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8712 chr3L 22922390 22922444 + 17 NA Intergenic Intergenic -16678 FBgn0037207 FBgn0037207 FBtr0078563 Mes2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12346 chr3R 25354606 25354775 + 17 NA Intergenic Intergenic -5668 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_473 chr2L 3140569 3140773 + 17 NA intron (FBgn0015600, intron 1 of 10) protein_coding-intron (FBgn0015600, intron 1 of 10) 5177 FBgn0031505 FBgn0031505 FBtr0077617 CG12400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2672 chr2L 17351763 17351967 + 17 NA Intergenic Intergenic 2803 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1520 chr2L 11297472 11297549 + 17 NA Intergenic Intergenic -6433 FBgn0263328 FBgn0263328 FBtr0308751 CR43409 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6624 chr2RHet 2242211 2242393 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7911 chr3L 13416693 13416759 + 17 NA TTS (FBgn0260459) protein_coding-TTS (FBgn0260459) 542 FBgn0053263 FBgn0053263 FBtr0075859 CG33263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9027 chr3R 976386 976440 + 17 NA promoter-TSS (FBgn0037295) protein_coding-promoter-TSS (FBgn0037295) -8921 FBgn0037294 FBgn0037294 FBtr0078773 CG12590 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13004 chr4 1012222 1012397 + 17 NA intron (FBgn0019650, intron 1 of 8) protein_coding-intron (FBgn0019650, intron 1 of 8) 1958 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4366 chr2R 4911774 4911851 + 17 NA intron (FBgn0033365, intron 2 of 7) protein_coding-intron (FBgn0033365, intron 2 of 8) 6452 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7581 chr3L 10615185 10615334 + 17 NA TTS (FBgn0260396) protein_coding-TTS (FBgn0260396) 1417 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13060 chrU 79216 79341 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7499 chr3L 9502692 9502761 + 17 NA promoter-TSS (FBgn0036008) protein_coding-promoter-TSS (FBgn0036008) -43 FBgn0036008 FBgn0036008 FBtr0333863 CG3408 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7197 chr3L 6451550 6451714 + 17 NA intron (FBgn0261801, intron 2 of 6) protein_coding-intron (FBgn0261801, intron 2 of 6) 29892 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9250 chr3R 2704282 2704516 + 17 NA Intergenic Intergenic 14353 FBgn0001077 FBgn0001077 FBtr0081625 ftz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_192 chr2L 1252101 1252170 + 17 NA Intergenic Intergenic -4291 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_50 chr2L 699903 700081 + 17 NA intron (FBgn0000497, intron 2 of 11) protein_coding-intron (FBgn0000497, intron 2 of 11) 14976 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9731 chr3R 6536343 6536571 + 17 NA exon (FBgn0037826, exon 1 of 1) protein_coding-exon (FBgn0037826, exon 1 of 1) 513 FBgn0037826 FBgn0037826 FBtr0082317 CG14689 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8242 chr3L 16298508 16298714 + 17 NA TTS (FBgn0262894) protein_coding-TTS (FBgn0262894) 359 FBgn0036600 FBgn0036600 FBtr0075434 CG13043 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4930 chr2R 9269477 9269678 + 17 NA Intergenic Intergenic -4358 FBgn0033830 FBgn0033830 FBtr0087720 CG10814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6400 chr2RHet 706582 706853 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6828 chr3L 1410452 1410672 + 17 NA promoter-TSS (FBgn0035216) protein_coding-promoter-TSS (FBgn0035216) -526 FBgn0035216 FBgn0035216 FBtr0072692 CG9168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11231 chr3R 17503043 17503097 + 17 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) -5598 FBgn0259113 FBgn0259113 FBtr0084115 DNApol-alpha180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6221 chr2R 20476725 20476930 + 17 NA intron (FBgn0020521, intron 2 of 7) protein_coding-intron (FBgn0020521, intron 3 of 8) 8041 FBgn0020521 FBgn0020521 FBtr0301502 pio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11890 chr3R 23442473 23442527 + 17 NA intron (FBgn0039530, intron 2 of 10) protein_coding-intron (FBgn0039530, intron 2 of 10) 8514 FBgn0039530 FBgn0039530 FBtr0302589 Tusp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12916 chr4 143652 143729 + 17 NA exon (FBgn0011747, exon 4 of 11) protein_coding-exon (FBgn0011747, exon 4 of 11) 6388 FBgn0011747 FBgn0011747 FBtr0089173 Ank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5724 chr2R 16246671 16246921 + 17 NA Intergenic Intergenic -4238 FBgn0034507 FBgn0034507 FBtr0290122 CG11192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2739 chr2L 17749920 17750133 + 17 NA intron (FBgn0015609, intron 3 of 23) protein_coding-intron (FBgn0015609, intron 1 of 21) 2320 FBgn0015609 FBgn0015609 FBtr0100316 CadN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5370 chr2R 13193068 13193306 + 17 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) 1620 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12755 chr3R 27506812 27507033 + 17 NA Intergenic Intergenic -1320 FBgn0039864 FBgn0039864 FBtr0085867 CG11550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1703 chr2L 12759075 12759129 + 17 NA Intergenic Intergenic 2738 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2632 chr2L 17210235 17210325 + 17 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 28342 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12357 chr3R 25383151 25383525 + 17 NA exon (FBgn0000492, exon 1 of 2) protein_coding-exon (FBgn0000492, exon 1 of 2) 1229 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13088 chrU 181208 181598 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10211 chr3R 10434631 10434863 + 17 NA promoter-TSS (FBgn0038246) protein_coding-promoter-TSS (FBgn0038246) -617 FBgn0038246 FBgn0038246 FBtr0082961 CG14853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13125 chrU 404548 404602 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8439 chr3L 17769288 17769452 + 17 NA Intergenic Intergenic -12112 FBgn0043025 FBgn0043025 FBtr0075192 Msi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6205 chr2R 20333910 20334106 + 17 NA exon (FBgn0035005, exon 1 of 1) protein_coding-exon (FBgn0035005, exon 1 of 1) 985 FBgn0035005 FBgn0035005 FBtr0072293 CG3483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11586 chr3R 22118912 22119085 + 17 NA Intergenic Intergenic 30614 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10871 chr3R 14876607 14876699 + 17 NA intron (FBgn0004876, intron 3 of 8) protein_coding-intron (FBgn0004876, intron 3 of 7) 17397 FBgn0038676 FBgn0038676 FBtr0273301 CG6026 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8549 chr3L 19104844 19104898 + 17 NA intron (FBgn0036851, intron 3 of 4) protein_coding-intron (FBgn0036851, intron 3 of 4) -11408 FBgn0036850 FBgn0036850 FBtr0075032 Gem2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6635 chr2RHet 2263172 2264059 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5670 chr2R 15881442 15881508 + 17 NA Intergenic Intergenic 6398 FBgn0050212 FBgn0050212 FBtr0086326 tRNA:CR30212 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1935 chr2L 14321825 14321995 + 17 NA exon (FBgn0261563, exon 8 of 16) protein_coding-exon (FBgn0261563, exon 8 of 16) -6519 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1506 chr2L 11183312 11183427 + 17 NA intron (FBgn0259822, intron 2 of 11) protein_coding-intron (FBgn0259822, intron 2 of 11) 4328 FBgn0032354 FBgn0032354 FBtr0080202 CG4788 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8135 chr3L 15359538 15359592 + 17 NA Intergenic Intergenic 29773 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13642 chrX 10317315 10317547 + 17 NA intron (FBgn0052683, intron 5 of 7) protein_coding-intron (FBgn0052683, intron 5 of 7) 5913 FBgn0030200 FBgn0030200 FBtr0071448 RabX2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6464 chr2RHet 1409993 1410301 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13786 chrX 17617033 17617136 + 17 NA promoter-TSS (FBgn0261570) protein_coding-promoter-TSS (FBgn0261570) 12906 FBgn0261570 FBgn0261570 FBtr0302833 CG42684 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9710 chr3R 6437649 6438011 + 17 NA intron (FBgn0001235, intron 1 of 5) protein_coding-intron (FBgn0001235, intron 1 of 12) -6438 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9970 chr3R 8600032 8600168 + 17 NA intron (FBgn0038084, intron 1 of 5) protein_coding-intron (FBgn0038084, intron 1 of 5) 3774 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3519 chr2L 21918794 21918859 + 17 NA Intergenic Intergenic 2465 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6458 chr2RHet 1305791 1306043 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11917 chr3R 23558810 23558897 + 17 NA Intergenic Intergenic -3409 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2534 chr2L 16867300 16867479 + 17 NA Intergenic Intergenic -2098 FBgn0051781 FBgn0051781 FBtr0308928 CR31781 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12641 chr3R 26972925 26973006 + 17 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 12851 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11052 chr3R 16020949 16021371 + 17 NA Intergenic Intergenic -9371 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4971 chr2R 9592091 9592269 + 17 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) -11306 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6134 chr2R 19657860 19657919 + 17 NA intron (FBgn0034903, intron 4 of 13) protein_coding-intron (FBgn0034903, intron 4 of 13) 17625 FBgn0034902 FBgn0034902 FBtr0072091 CG5532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10380 chr3R 11738508 11738705 + 17 NA exon (FBgn0085304, exon 1 of 2) protein_coding-exon (FBgn0085304, exon 1 of 2) 1047 FBgn0085304 FBgn0085304 FBtr0112470 CG34275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12210 chr3R 24611355 24611447 + 17 NA Intergenic Intergenic -3938 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12066 chr3R 24123099 24123269 + 17 NA Intergenic Intergenic 3358 FBgn0039576 FBgn0039576 FBtr0085279 CG17856 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1213 chr2L 8815505 8815634 + 17 NA Intergenic Intergenic 6169 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8303 chr3L 16824462 16824623 + 17 NA Intergenic Intergenic -2368 FBgn0036665 FBgn0036665 FBtr0273320 CG13024 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4115 chr2R 3119529 3119776 + 17 NA TTS (FBgn0026389) protein_coding-TTS (FBgn0026389) 2766 FBgn0026389 FBgn0026389 FBtr0089051 Or43a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1654 chr2L 12551578 12551791 + 17 NA Intergenic Intergenic 8508 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5630 chr2R 15600021 15600279 + 17 NA promoter-TSS (FBgn0043533) protein_coding-promoter-TSS (FBgn0043533) 300 FBgn0034471 FBgn0034471 FBtr0086327 Obp56e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6036 chr2R 18923278 18923638 + 17 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) 7004 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12950 chr4 625245 625469 + 17 NA intron (FBgn0028996, intron 2 of 4) protein_coding-intron (FBgn0028996, intron 1 of 3) 2994 FBgn0028996 FBgn0028996 FBtr0089104 onecut protein_coding Nup98-S2-pascual-garcia2017_R1_peak_471 chr2L 3129860 3130012 + 17 NA TTS (FBgn0031504) protein_coding-TTS (FBgn0031504) 1216 FBgn0031504 FBgn0031504 FBtr0077661 CG15403 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3431 chr2L 21708160 21708359 + 17 NA intron (FBgn0051619, intron 7 of 19) protein_coding-intron (FBgn0051619, intron 7 of 18) 24077 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7556 chr3L 10463224 10463392 + 17 NA Intergenic Intergenic 3873 FBgn0045770 FBgn0045770 FBtr0334098 S-Lap3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2818 chr2L 18010541 18010771 + 17 NA TTS (FBgn0051740) protein_coding-TTS (FBgn0051740) 819 FBgn0032660 FBgn0032660 FBtr0302031 elfless protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6474 chr2RHet 1451028 1451273 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4893 chr2R 8942594 8942713 + 17 NA Intergenic Intergenic -5530 FBgn0033789 FBgn0033789 FBtr0087796 CG13324 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4444 chr2R 5504713 5504919 + 17 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) 3972 FBgn0262385 FBgn0262385 FBtr0304246 mir-307a pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3739 chr2L 22525533 22525743 + 17 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 53156 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5976 chr2R 18355248 18355441 + 17 NA intron (FBgn0034731, intron 2 of 5) protein_coding-intron (FBgn0034731, intron 2 of 5) 1350 FBgn0034731 FBgn0034731 FBtr0300683 CG10384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2378 chr2L 15986610 15986732 + 17 NA Intergenic Intergenic -3085 FBgn0263331 FBgn0263331 FBtr0308754 CR43412 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12807 chr3R 27777421 27777478 + 17 NA intron (FBgn0011224, intron 5 of 15) protein_coding-intron (FBgn0011224, intron 4 of 13) 29442 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10839 chr3R 14674879 14675051 + 17 NA promoter-TSS (FBgn0038653) protein_coding-promoter-TSS (FBgn0038653) -19 FBgn0038653 FBgn0038653 FBtr0332809 CG18208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9507 chr3R 4529001 4529068 + 17 NA intron (FBgn0037612, intron 1 of 3) protein_coding-intron (FBgn0037612, intron 1 of 3) -8712 FBgn0001180 FBgn0001180 FBtr0081951 hb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7173 chr3L 6270478 6270759 + 17 NA TTS (FBgn0262787) protein_coding-TTS (FBgn0262787) 1818 FBgn0262787 FBgn0262787 FBtr0305900 CG43168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4256 chr2R 4232711 4232802 + 17 NA intron (FBgn0261588, intron 1 of 10) protein_coding-intron (FBgn0261588, intron 1 of 10) -13287 FBgn0033283 FBgn0033283 FBtr0088739 CG11635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8744 chr3L 23528694 23528786 + 17 NA Intergenic Intergenic -20285 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10819 chr3R 14464198 14464350 + 17 NA intron (FBgn0038632, intron 1 of 3) protein_coding-intron (FBgn0038632, intron 1 of 3) 2905 FBgn0038632 FBgn0038632 FBtr0290199 CG14301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4324 chr2R 4696998 4697071 + 17 NA intron (FBgn0024189, intron 1 of 21) protein_coding-intron (FBgn0024189, intron 1 of 20) 11012 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8447 chr3L 17885591 17885849 + 17 NA exon (FBgn0036769, exon 6 of 7) protein_coding-exon (FBgn0036769, exon 6 of 7) 3242 FBgn0036769 FBgn0036769 FBtr0075155 Tsp74F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_15 chr2L 261896 261959 + 17 NA exon (FBgn0031239, exon 1 of 1) protein_coding-exon (FBgn0031239, exon 1 of 1) 5578 FBgn0031239 FBgn0031239 FBtr0078142 CG17075 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3597 chr2L 22061061 22061498 + 17 NA Intergenic Intergenic 4001 FBgn0260996 FBgn0260996 FBtr0301799 CG42597 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12587 chr3R 26753895 26754049 + 17 NA intron (FBgn0020912, intron 4 of 4) protein_coding-intron (FBgn0020912, intron 4 of 4) 8257 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4574 chr2R 6454018 6454184 + 17 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 8708 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3849 chr2L 22907681 22907908 + 17 NA exon (FBgn0250907, exon 4 of 9) protein_coding-exon (FBgn0250907, exon 4 of 9) 10766 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_917 chr2L 6766121 6766261 + 17 NA TTS (FBgn0031857) protein_coding-TTS (FBgn0031857) 6418 FBgn0031857 FBgn0031857 FBtr0301972 CG11321 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5873 chr2R 17468438 17468656 + 17 NA Intergenic Intergenic -2450 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8348 chr3L 17181896 17182105 + 17 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 22037 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3360 chr2L 21240929 21241131 + 17 NA intron (FBgn0261239, intron 2 of 7) protein_coding-intron (FBgn0261239, intron 2 of 4) 3780 FBgn0261239 FBgn0261239 FBtr0081478 Hr39 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12487 chr3R 25809731 25809834 + 17 NA intron (FBgn0039728, intron 1 of 6) protein_coding-intron (FBgn0039728, intron 1 of 6) 608 FBgn0039728 FBgn0039728 FBtr0085545 CG7896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3994 chr2R 1346596 1346650 + 17 NA Intergenic Intergenic 36718 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11939 chr3R 23631907 23632108 + 17 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -38804 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11234 chr3R 17517367 17517528 + 17 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) -19975 FBgn0259113 FBgn0259113 FBtr0084115 DNApol-alpha180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11682 chr3R 22483557 22483611 + 17 NA TTS (FBgn0243586) protein_coding-TTS (FBgn0243586) 1416 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5846 chr2R 17434906 17435277 + 17 NA promoter-TSS (FBgn0003731) protein_coding-promoter-TSS (FBgn0003731) 17 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6053 chr2R 19006226 19006289 + 17 NA Intergenic Intergenic 7308 FBgn0034824 FBgn0034824 FBtr0071975 Klp59C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4360 chr2R 4899022 4899214 + 17 NA exon (FBgn0033362, exon 1 of 6) protein_coding-exon (FBgn0033362, exon 1 of 6) 451 FBgn0033362 FBgn0033362 FBtr0301193 CG8172 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1350 chr2L 9536204 9536258 + 17 NA exon (FBgn0032123, exon 5 of 9) protein_coding-exon (FBgn0032123, exon 5 of 9) -4400 FBgn0032124 FBgn0032124 FBtr0079830 CG17855 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5328 chr2R 12641478 12641643 + 17 NA promoter-TSS (FBgn0085218) protein_coding-promoter-TSS (FBgn0085218) -389 FBgn0085218 FBgn0085218 FBtr0112382 CG34189 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10778 chr3R 14283230 14283432 + 17 NA intron (FBgn0004652, intron 2 of 7) protein_coding-intron (FBgn0004652, intron 2 of 7) -45978 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6049 chr2R 18979394 18979463 + 17 NA intron (FBgn0034821, intron 1 of 2) protein_coding-intron (FBgn0034821, intron 1 of 2) 2357 FBgn0034821 FBgn0034821 FBtr0071979 CG9876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7606 chr3L 10732437 10732550 + 17 NA Intergenic Intergenic -32599 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7418 chr3L 8572643 8573081 + 17 NA intron (FBgn0262508, intron 2 of 7) protein_coding-intron (FBgn0262508, intron 2 of 7) 1020 FBgn0262508 FBgn0262508 FBtr0304812 CG43078 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5488 chr2R 14270492 14270546 + 17 NA promoter-TSS (FBgn0034329) protein_coding-promoter-TSS (FBgn0034329) 218 FBgn0034328 FBgn0034328 FBtr0086729 IM23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10645 chr3R 13436872 13436930 + 17 NA TTS (FBgn0038525) protein_coding-TTS (FBgn0038525) 222 FBgn0004554 FBgn0004554 FBtr0300767 Edg91 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5314 chr2R 12555498 12555614 + 17 NA promoter-TSS (FBgn0024315) protein_coding-promoter-TSS (FBgn0024315) -2275 FBgn0085486 FBgn0085486 FBtr0112763 CG34457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1994 chr2L 14458022 14458271 + 17 NA Intergenic Intergenic -7224 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12483 chr3R 25797143 25797328 + 17 NA Intergenic Intergenic -2066 FBgn0004622 FBgn0004622 FBtr0330298 Takr99D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11891 chr3R 23444749 23444881 + 17 NA intron (FBgn0039530, intron 2 of 10) protein_coding-intron (FBgn0039530, intron 2 of 10) 6916 FBgn0039529 FBgn0039529 FBtr0085200 CG5612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9983 chr3R 8649142 8649196 + 17 NA Intergenic Intergenic -6418 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_144 chr2L 1007986 1008040 + 17 NA TTS (FBgn0031294) protein_coding-TTS (FBgn0031294) 18877 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3779 chr2L 22615794 22616092 + 17 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 28584 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11154 chr3R 16717374 16717457 + 17 NA promoter-TSS (FBgn0051333) tRNA-promoter-TSS (FBgn0051333) 35 FBgn0051333 FBgn0051333 FBtr0083977 tRNA:CR31333 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4264 chr2R 4270901 4270982 + 17 NA intron (FBgn0261588, intron 2 of 10) protein_coding-intron (FBgn0261588, intron 2 of 10) 12363 FBgn0033287 FBgn0033287 FBtr0088740 CG8701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6878 chr3L 1927709 1927763 + 17 NA intron (FBgn0261723, intron 4 of 4) protein_coding-intron (FBgn0261723, intron 4 of 4) 2095 FBgn0052312 FBgn0052312 FBtr0072840 tRNA:CR32312 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1623 chr2L 12271598 12271685 + 17 NA exon (FBgn0000114, exon 3 of 12) protein_coding-exon (FBgn0000114, exon 3 of 12) 63932 FBgn0051759 FBgn0051759 FBtr0290239 CG31759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9890 chr3R 7972037 7972128 + 17 NA intron (FBgn0037993, intron 3 of 6) protein_coding-intron (FBgn0037993, intron 3 of 6) 12235 FBgn0037993 FBgn0037993 FBtr0082549 dpr15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8502 chr3L 18314570 18314782 + 17 NA Intergenic Intergenic -17159 FBgn0015946 FBgn0015946 FBtr0075130 grim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10885 chr3R 15055132 15055186 + 17 NA promoter-TSS (FBgn0038692) protein_coding-promoter-TSS (FBgn0038692) -56 FBgn0038692 FBgn0038692 FBtr0083737 CG3773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12569 chr3R 26699624 26699678 + 17 NA TTS (FBgn0039807) protein_coding-TTS (FBgn0039807) -1649 FBgn0039806 FBgn0039806 FBtr0085719 CG15545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7172 chr3L 6269624 6269711 + 17 NA exon (FBgn0262787, exon 2 of 2) protein_coding-exon (FBgn0262787, exon 2 of 2) 867 FBgn0262787 FBgn0262787 FBtr0305900 CG43168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9663 chr3R 6054540 6054657 + 17 NA promoter-TSS (FBgn0261928) protein_coding-promoter-TSS (FBgn0261928) 3122 FBgn0261928 FBgn0261928 FBtr0303602 CG42795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7179 chr3L 6307813 6307867 + 17 NA Intergenic Intergenic -5871 FBgn0041625 FBgn0041625 FBtr0077004 Or65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13646 chrX 10563308 10563362 + 17 NA intron (FBgn0052677, intron 2 of 12) protein_coding-intron (FBgn0052677, intron 2 of 14) 4164 FBgn0030224 FBgn0030224 FBtr0071504 CG12637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1756 chr2L 13010327 13010414 + 17 NA exon (FBgn0021796, exon 6 of 7) protein_coding-exon (FBgn0021796, exon 6 of 7) 5584 FBgn0021796 FBgn0021796 FBtr0080422 Tor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2860 chr2L 18204278 18204460 + 17 NA exon (FBgn0261804, exon 7 of 15) protein_coding-exon (FBgn0261804, exon 7 of 15) 4033 FBgn0263332 FBgn0263332 FBtr0308755 CR43413 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1799 chr2L 13429912 13430204 + 17 NA intron (FBgn0263354, intron 2 of 8) protein_coding-intron (FBgn0263354, intron 2 of 8) -5564 FBgn0026760 FBgn0026760 FBtr0080502 Tehao protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7450 chr3L 8807099 8807226 + 17 NA Intergenic Intergenic 3667 FBgn0035933 FBgn0035933 FBtr0076582 CG13309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10841 chr3R 14681779 14682002 + 17 NA Intergenic Intergenic -4370 FBgn0051226 FBgn0051226 FBtr0083676 CG31226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7130 chr3L 5983032 5983167 + 17 NA Intergenic Intergenic -7209 FBgn0052406 FBgn0052406 FBtr0077037 CG32406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7925 chr3L 13538770 13538934 + 17 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -26147 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2571 chr2L 16997373 16997504 + 17 NA Intergenic Intergenic 12460 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6494 chr2RHet 1709373 1709463 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7321 chr3L 7547915 7548155 + 17 NA TTS (FBgn0035797) protein_coding-TTS (FBgn0035797) 5102 FBgn0035797 FBgn0035797 FBtr0290223 CG14837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3621 chr2L 22098620 22098813 + 17 NA Intergenic Intergenic 5685 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11298 chr3R 18114232 18114286 + 17 NA intron (FBgn0051163, intron 12 of 18) protein_coding-intron (FBgn0051163, intron 12 of 18) -4389 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1422 chr2L 10153082 10153460 + 17 NA intron (FBgn0032187, intron 5 of 9) protein_coding-intron (FBgn0032187, intron 6 of 10) 6412 FBgn0032187 FBgn0032187 FBtr0079944 CG4839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12885 chr3RHet 1975526 1975656 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4331 chr2R 4725103 4725157 + 17 NA intron (FBgn0024189, intron 18 of 21) protein_coding-intron (FBgn0024189, intron 17 of 20) 11234 FBgn0050350 FBgn0050350 FBtr0088636 CG30350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8122 chr3L 15161226 15161302 + 17 NA Intergenic Intergenic -4536 FBgn0036489 FBgn0036489 FBtr0075645 CG7011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12472 chr3R 25741399 25741641 + 17 NA intron (FBgn0003861, intron 12 of 13) protein_coding-intron (FBgn0003861, intron 12 of 13) -1452 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8639 chr3L 21315315 21315455 + 17 NA promoter-TSS (FBgn0086913) protein_coding-promoter-TSS (FBgn0086913) -96 FBgn0086913 FBgn0086913 FBtr0331795 Rab26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2158 chr2L 15079793 15079949 + 17 NA intron (FBgn0028879, intron 2 of 16) protein_coding-intron (FBgn0028879, intron 1 of 16) 5095 FBgn0028879 FBgn0028879 FBtr0332180 CG15270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4278 chr2R 4375794 4376019 + 17 NA intron (FBgn0050361, intron 4 of 18) protein_coding-intron (FBgn0050361, intron 4 of 18) 16418 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1444 chr2L 10603998 10604052 + 17 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -22363 FBgn0085190 FBgn0085190 FBtr0112352 CG34161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13567 chrX 5907247 5907387 + 17 NA promoter-TSS (FBgn0029003) protein_coding-promoter-TSS (FBgn0029003) -106 FBgn0029003 FBgn0029003 FBtr0070890 mab-21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10386 chr3R 11775695 11775804 + 17 NA TTS (FBgn0051088) protein_coding-TTS (FBgn0051088) 916 FBgn0051088 FBgn0051088 FBtr0083241 CG31088 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8319 chr3L 16936072 16936249 + 17 NA promoter-TSS (FBgn0036680) protein_coding-promoter-TSS (FBgn0036680) -111 FBgn0036680 FBgn0036680 FBtr0113176 Cpr73D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2633 chr2L 17211397 17211451 + 17 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -27935 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11065 chr3R 16161369 16161748 + 17 NA Intergenic Intergenic -3431 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_613 chr2L 4283751 4283809 + 17 NA promoter-TSS (FBgn0010473) protein_coding-promoter-TSS (FBgn0010473) 632 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2350 chr2L 15877533 15877730 + 17 NA exon (FBgn0028935, exon 4 of 4) protein_coding-exon (FBgn0028935, exon 4 of 4) 2434 FBgn0028935 FBgn0028935 FBtr0306681 CG7653 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_770 chr2L 5493808 5493871 + 17 NA Intergenic Intergenic -23780 FBgn0031707 FBgn0031707 FBtr0329966 CG14020 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5403 chr2R 13538375 13538469 + 17 NA exon (FBgn0050106, exon 4 of 8) protein_coding-exon (FBgn0050106, exon 4 of 8) 3379 FBgn0050106 FBgn0050106 FBtr0086893 CCHa1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_876 chr2L 6353701 6353762 + 17 NA exon (FBgn0031802, exon 1 of 5) protein_coding-exon (FBgn0031802, exon 1 of 5) 600 FBgn0031802 FBgn0031802 FBtr0079281 ppk7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12403 chr3R 25517952 25518338 + 17 NA promoter-TSS (FBgn0039683) protein_coding-promoter-TSS (FBgn0039683) -168 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13006 chr4 1014712 1014896 + 17 NA intron (FBgn0019650, intron 2 of 8) protein_coding-intron (FBgn0019650, intron 2 of 8) 4453 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_23 chr2L 320463 320598 + 17 NA exon (FBgn0031249, exon 1 of 1) protein_coding-exon (FBgn0031249, exon 1 of 1) 718 FBgn0031249 FBgn0031249 FBtr0078098 CG11911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11504 chr3R 21760229 21760462 + 17 NA intron (FBgn0039396, intron 2 of 6) protein_coding-intron (FBgn0039396, intron 2 of 6) 3222 FBgn0054024 FBgn0054024 FBtr0308933 CR34024 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6467 chr2RHet 1416886 1416981 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11438 chr3R 20619281 20619367 + 17 NA intron (FBgn0039225, intron 2 of 5) protein_coding-intron (FBgn0039225, intron 3 of 6) 1241 FBgn0039225 FBgn0039225 FBtr0084697 Ets96B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7138 chr3L 6021709 6021763 + 17 NA Intergenic Intergenic 5975 FBgn0035661 FBgn0035661 FBtr0077068 CG10477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5739 chr2R 16401926 16402030 + 17 NA Intergenic Intergenic -1304 FBgn0034510 FBgn0034510 FBtr0086295 CG13426 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13184 chrU 1913804 1913919 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9798 chr3R 7114355 7114479 + 17 NA intron (FBgn0051386, intron 2 of 4) ncRNA-intron (FBgn0051386, intron 2 of 4) 16913 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3727 chr2L 22481769 22481914 + 17 NA Intergenic Intergenic 9359 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13598 chrX 7894127 7894181 + 17 NA intron (FBgn0010329, intron 2 of 7) protein_coding-intron (FBgn0010329, intron 2 of 7) 4424 FBgn0010329 FBgn0010329 FBtr0089999 Tbh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1430 chr2L 10346181 10346250 + 17 NA exon (FBgn0032225, exon 5 of 8) protein_coding-exon (FBgn0032225, exon 5 of 8) 1773 FBgn0032225 FBgn0032225 FBtr0079999 CG5022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6954 chr3L 2846706 2846821 + 17 NA intron (FBgn0263392, intron 5 of 10) protein_coding-intron (FBgn0263392, intron 4 of 9) 32395 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1635 chr2L 12347880 12347945 + 17 NA promoter-TSS (FBgn0262475) protein_coding-promoter-TSS (FBgn0262475) -205 FBgn0262475 FBgn0262475 FBtr0304864 bru-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12844 chr3RHet 755598 755652 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12367 chr3R 25406631 25406793 + 17 NA Intergenic Intergenic 7110 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4753 chr2R 7814680 7814852 + 17 NA Intergenic Intergenic -12223 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1274 chr2L 8920106 8920232 + 17 NA intron (FBgn0085427, intron 2 of 10) protein_coding-intron (FBgn0085427, intron 2 of 10) -13894 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1029 chr2L 7933501 7933555 + 17 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -42934 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8374 chr3L 17316042 17316207 + 17 NA exon (FBgn0036707, exon 1 of 1) protein_coding-exon (FBgn0036707, exon 1 of 1) 183 FBgn0036707 FBgn0036707 FBtr0075214 CG13724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10235 chr3R 10691142 10691321 + 17 NA Intergenic Intergenic -5671 FBgn0038267 FBgn0038267 FBtr0083012 CG17304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6762 chr3L 753929 753983 + 17 NA TTS (FBgn0000575) protein_coding-TTS (FBgn0000575) 1533 FBgn0035160 FBgn0035160 FBtr0072601 CG13897 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4417 chr2R 5274143 5274378 + 17 NA intron (FBgn0033405, intron 1 of 7) protein_coding-intron (FBgn0033405, intron 1 of 7) 1499 FBgn0033405 FBgn0033405 FBtr0332997 CG13954 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5449 chr2R 13931928 13932243 + 17 NA promoter-TSS (FBgn0034290) protein_coding-promoter-TSS (FBgn0034290) 480 FBgn0034291 FBgn0034291 FBtr0086812 CG5770 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11472 chr3R 21595047 21595243 + 17 NA Intergenic Intergenic 4976 FBgn0039366 FBgn0039366 FBtr0084924 CG17198 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9624 chr3R 5677319 5677377 + 17 NA intron (FBgn0037766, intron 2 of 2) protein_coding-intron (FBgn0037766, intron 2 of 2) 16494 FBgn0037766 FBgn0037766 FBtr0330082 Teh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2536 chr2L 16873103 16873205 + 17 NA intron (FBgn0051781, intron 1 of 1) ncRNA-intron (FBgn0051781, intron 1 of 1) 3667 FBgn0051781 FBgn0051781 FBtr0308928 CR31781 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9398 chr3R 3757408 3757603 + 17 NA intron (FBgn0000504, intron 3 of 4) protein_coding-intron (FBgn0000504, intron 3 of 4) 9840 FBgn0261453 FBgn0261453 FBtr0309754 scaRNA:mgU2-41 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8149 chr3L 15466087 15466320 + 17 NA exon (FBgn0036496, exon 3 of 3) protein_coding-exon (FBgn0036496, exon 3 of 3) 1007 FBgn0036496 FBgn0036496 FBtr0332815 CG7804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2887 chr2L 18359789 18359849 + 17 NA promoter-TSS (FBgn0011559) protein_coding-promoter-TSS (FBgn0011559) -793 FBgn0011559 FBgn0011559 FBtr0081054 Acp36DE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7619 chr3L 10896941 10897017 + 17 NA Intergenic Intergenic -4756 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2068 chr2L 14734503 14734729 + 17 NA Intergenic Intergenic -1227 FBgn0051835 FBgn0051835 FBtr0080667 CG31835 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3486 chr2L 21842311 21842759 + 17 NA Intergenic Intergenic 13942 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12378 chr3R 25461647 25462070 + 17 NA intron (FBgn0015129, intron 4 of 4) protein_coding-intron (FBgn0015129, intron 4 of 4) 17102 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10136 chr3R 9711263 9711494 + 17 NA Intergenic Intergenic -10740 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9999 chr3R 8758783 8758887 + 17 NA intron (FBgn0038092, intron 4 of 6) protein_coding-intron (FBgn0038092, intron 4 of 6) 16991 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9118 chr3R 1877358 1877412 + 17 NA Intergenic Intergenic 5874 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3985 chr2R 1064809 1065009 + 17 NA TTS (FBgn0053554) protein_coding-TTS (FBgn0053554) 32671 FBgn0033010 FBgn0033010 FBtr0086080 Atf6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8553 chr3L 19190380 19190565 + 17 NA intron (FBgn0016797, intron 3 of 5) protein_coding-intron (FBgn0016797, intron 4 of 6) -26724 FBgn0016797 FBgn0016797 FBtr0075029 fz2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6396 chr2RHet 702121 702249 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3358 chr2L 21235359 21235448 + 17 NA intron (FBgn0051626, intron 1 of 2) protein_coding-intron (FBgn0051626, intron 1 of 2) -1677 FBgn0051626 FBgn0051626 FBtr0081486 CG31626 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9905 chr3R 8039951 8040005 + 17 NA promoter-TSS (FBgn0037997) protein_coding-promoter-TSS (FBgn0037997) -555 FBgn0037997 FBgn0037997 FBtr0306051 CG14742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10730 chr3R 13907945 13908099 + 17 NA exon (FBgn0038566, exon 1 of 1) protein_coding-exon (FBgn0038566, exon 1 of 1) 1179 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5842 chr2R 17414071 17414286 + 17 NA intron (FBgn0003731, intron 1 of 4) protein_coding-intron (FBgn0003731, intron 1 of 4) -4825 FBgn0050289 FBgn0050289 FBtr0071697 CG30289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_294 chr2L 1541486 1541540 + 17 NA Intergenic Intergenic -13617 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12416 chr3R 25527485 25527844 + 17 NA Intergenic Intergenic 9351 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1973 chr2L 14421164 14421376 + 17 NA Intergenic Intergenic 3861 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8896 chr3LHet 1339195 1339261 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9976 chr3R 8622942 8623133 + 17 NA Intergenic Intergenic -19163 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2428 chr2L 16162952 16163209 + 17 NA Intergenic Intergenic -2751 FBgn0001991 FBgn0001991 FBtr0332020 Ca-alpha1D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5548 chr2R 14830764 14830896 + 17 NA intron (FBgn0034408, intron 4 of 7) protein_coding-intron (FBgn0034408, intron 4 of 7) 27826 FBgn0014269 FBgn0014269 FBtr0086601 prod protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3541 chr2L 21965147 21965306 + 17 NA Intergenic Intergenic 27707 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1237 chr2L 8860237 8860587 + 17 NA Intergenic Intergenic -2364 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3443 chr2L 21735597 21735790 + 17 NA Intergenic Intergenic 21773 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11297 chr3R 18111247 18111306 + 17 NA exon (FBgn0051163, exon 11 of 19) protein_coding-exon (FBgn0051163, exon 11 of 19) -7372 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2956 chr2L 19078532 19078592 + 17 NA TTS (FBgn0002023) protein_coding-TTS (FBgn0002023) 466 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9936 chr3R 8354335 8354539 + 17 NA exon (FBgn0028374, exon 3 of 3) protein_coding-exon (FBgn0028374, exon 3 of 3) 2527 FBgn0028374 FBgn0028374 FBtr0082639 hug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5614 chr2R 15512537 15512591 + 17 NA intron (FBgn0003435, intron 2 of 10) protein_coding-intron (FBgn0003435, intron 2 of 9) -10220 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9451 chr3R 4160172 4160244 + 17 NA promoter-TSS (FBgn0003129) protein_coding-promoter-TSS (FBgn0003129) -694 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7183 chr3L 6364305 6364529 + 17 NA Intergenic Intergenic -18927 FBgn0035699 FBgn0035699 FBtr0077007 CG13300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6551 chr2RHet 1922716 1923133 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2732 chr2L 17709438 17709542 + 17 NA exon (FBgn0015609, exon 10 of 22) protein_coding-exon (FBgn0015609, exon 10 of 22) 4809 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6733 chr3L 613245 613553 + 17 NA Intergenic Intergenic 3247 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5123 chr2R 10894509 10894706 + 17 NA Intergenic Intergenic -4296 FBgn0029082 FBgn0029082 FBtr0087414 hbs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9559 chr3R 5112792 5113005 + 17 NA Intergenic Intergenic 20144 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2905 chr2L 18528089 18528182 + 17 NA exon (FBgn0032685, exon 3 of 9) protein_coding-exon (FBgn0032685, exon 3 of 9) 10642 FBgn0032685 FBgn0032685 FBtr0081069 CG10211 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5791 chr2R 16908516 16908570 + 17 NA exon (FBgn0050296, exon 4 of 10) protein_coding-exon (FBgn0050296, exon 4 of 10) 3253 FBgn0050296 FBgn0050296 FBtr0310056 RIC-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8431 chr3L 17695718 17695941 + 17 NA intron (FBgn0052183, intron 1 of 9) protein_coding-intron (FBgn0052183, intron 1 of 9) 12714 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12955 chr4 671283 671413 + 17 NA exon (FBgn0051992, exon 10 of 10) protein_coding-exon (FBgn0051992, exon 10 of 10) -4166 FBgn0039916 FBgn0039916 FBtr0110907 CG9935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11571 chr3R 22025962 22026076 + 17 NA Intergenic Intergenic -9092 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8962 chr3R 457670 457949 + 17 NA exon (FBgn0087012, exon 7 of 7) protein_coding-exon (FBgn0087012, exon 7 of 7) 9508 FBgn0037261 FBgn0037261 FBtr0078895 CG9775 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5308 chr2R 12493875 12493929 + 17 NA Intergenic Intergenic -1186 FBgn0034143 FBgn0034143 FBtr0273388 CG8303 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4649 chr2R 7216701 7216799 + 17 NA exon (FBgn0003382, exon 2 of 9) protein_coding-exon (FBgn0003382, exon 2 of 9) 3457 FBgn0003382 FBgn0003382 FBtr0332463 sha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7551 chr3L 10329010 10329191 + 17 NA Intergenic Intergenic 16154 FBgn0262381 FBgn0262381 FBtr0304227 mir-276b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12258 chr3R 24907918 24907972 + 17 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 18395 FBgn0039633 FBgn0039633 FBtr0330300 CG11873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3077 chr2L 19699749 19700087 + 17 NA exon (FBgn0005590, exon 1 of 1) protein_coding-exon (FBgn0005590, exon 1 of 1) 1050 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6601 chr2RHet 2139087 2139190 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10175 chr3R 10092060 10092215 + 17 NA exon (FBgn0003862, exon 6 of 9) protein_coding-exon (FBgn0003862, exon 6 of 9) -3997 FBgn0038218 FBgn0038218 FBtr0082951 CG14841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3188 chr2L 20365441 20365570 + 17 NA TTS (FBgn0015803) protein_coding-TTS (FBgn0015803) 8462 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3410 chr2L 21584766 21585022 + 17 NA intron (FBgn0016919, intron 4 of 6) protein_coding-intron (FBgn0016919, intron 4 of 7) 4461 FBgn0016919 FBgn0016919 FBtr0301173 nompB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10639 chr3R 13391218 13391388 + 17 NA intron (FBgn0264005, intron 2 of 2) protein_coding-intron (FBgn0264005, intron 2 of 2) 6651 FBgn0264005 FBgn0264005 FBtr0330386 Hmx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_226 chr2L 1376488 1376697 + 17 NA Intergenic Intergenic 8503 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10690 chr3R 13690146 13690259 + 17 NA exon (FBgn0261649, exon 7 of 10) protein_coding-exon (FBgn0261649, exon 7 of 10) -41984 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1 chr2L 5796 5899 + 17 NA Intergenic Intergenic -1682 FBgn0031208 FBgn0031208 FBtr0330654 CG11023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12171 chr3R 24540614 24540816 + 17 NA exon (FBgn0027655, exon 13 of 29) protein_coding-exon (FBgn0027655, exon 13 of 29) 18751 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6513 chr2RHet 1861026 1861208 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11066 chr3R 16162019 16162441 + 17 NA Intergenic Intergenic -2759 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3108 chr2L 19841860 19841935 + 17 NA intron (FBgn0263873, intron 1 of 14) protein_coding-intron (FBgn0263873, intron 2 of 15) -14204 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11970 chr3R 23798701 23798807 + 17 NA exon (FBgn0003890, exon 3 of 8) protein_coding-exon (FBgn0003890, exon 3 of 8) 9616 FBgn0039566 FBgn0039566 FBtr0085257 CG4849 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5759 chr2R 16644035 16644109 + 17 NA Intergenic Intergenic 3962 FBgn0085231 FBgn0085231 FBtr0112395 CG34202 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9957 chr3R 8473683 8473737 + 17 NA promoter-TSS (FBgn0038071) protein_coding-promoter-TSS (FBgn0038071) -72 FBgn0038071 FBgn0038071 FBtr0082648 CG6234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_565 chr2L 3854056 3854110 + 17 NA Intergenic Intergenic -8598 FBgn0031574 FBgn0031574 FBtr0077502 CG3964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7593 chr3L 10702587 10702822 + 17 NA Intergenic Intergenic -12727 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2540 chr2L 16919312 16919578 + 17 NA Intergenic Intergenic -9136 FBgn0026150 FBgn0026150 FBtr0304931 ApepP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6778 chr3L 1042494 1042677 + 17 NA intron (FBgn0004870, intron 1 of 3) protein_coding-intron (FBgn0004870, intron 1 of 3) 7400 FBgn0035181 FBgn0035181 FBtr0072622 CG9205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10527 chr3R 12596400 12596614 + 17 NA intron (FBgn0020556, intron 1 of 2) ncRNA-intron (FBgn0020556, intron 1 of 2) -4429 FBgn0085056 FBgn0085056 FBtr0113492 tre-1 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10959 chr3R 15542437 15542491 + 17 NA promoter-TSS (FBgn0085315) protein_coding-promoter-TSS (FBgn0085315) -815 FBgn0085315 FBgn0085315 FBtr0112482 CG34286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_522 chr2L 3578914 3579037 + 17 NA exon (FBgn0004892, exon 1 of 2) protein_coding-exon (FBgn0004892, exon 1 of 2) 1794 FBgn0004892 FBgn0004892 FBtr0077558 sob protein_coding Nup98-S2-pascual-garcia2017_R1_peak_355 chr2L 1995741 1995951 + 17 NA Intergenic Intergenic -3694 FBgn0043539 FBgn0043539 FBtr0100503 Obp22a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1165 chr2L 8745329 8745521 + 17 NA Intergenic Intergenic -4765 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6721 chr3L 459086 459206 + 17 NA intron (FBgn0001316, intron 2 of 14) protein_coding-intron (FBgn0001316, intron 6 of 18) -11014 FBgn0001316 FBgn0001316 FBtr0112808 klar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9048 chr3R 1242551 1242689 + 17 NA exon (FBgn0037326, exon 2 of 8) protein_coding-exon (FBgn0037326, exon 2 of 8) 2345 FBgn0037326 FBgn0037326 FBtr0078679 CG14669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9452 chr3R 4160824 4160907 + 17 NA Intergenic Intergenic -1351 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6368 chr2RHet 553707 553830 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3731 chr2L 22485392 22485555 + 17 NA Intergenic Intergenic 12991 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8738 chr3L 23474107 23474273 + 17 NA Intergenic Intergenic -74835 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8201 chr3L 16017540 16017700 + 17 NA intron (FBgn0044028, intron 1 of 3) protein_coding-intron (FBgn0044028, intron 1 of 3) 1040 FBgn0044028 FBgn0044028 FBtr0075435 Notum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3865 chr2LHet 154234 154420 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12334 chr3R 25276334 25276550 + 17 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -28978 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7486 chr3L 9175593 9175651 + 17 NA promoter-TSS (FBgn0004244) protein_coding-promoter-TSS (FBgn0004244) -373 FBgn0004244 FBgn0004244 FBtr0309054 Rdl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13821 chrX 18922738 18922825 + 17 NA TTS (FBgn0264090) protein_coding-TTS (FBgn0264090) -21725 FBgn0085358 FBgn0085358 FBtr0112531 Diedel3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12344 chr3R 25335095 25335156 + 17 NA Intergenic Intergenic -5606 FBgn0039668 FBgn0039668 FBtr0085431 Trc8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7762 chr3L 12320849 12320990 + 17 NA Intergenic Intergenic -1413 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_270 chr2L 1467076 1467169 + 17 NA Intergenic Intergenic 24396 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12376 chr3R 25456609 25456680 + 17 NA exon (FBgn0015129, exon 5 of 5) protein_coding-exon (FBgn0015129, exon 5 of 5) 11888 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11043 chr3R 15964967 15965057 + 17 NA exon (FBgn0262025, exon 3 of 3) ncRNA-exon (FBgn0262025, exon 3 of 3) 631 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10515 chr3R 12523448 12523518 + 17 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) 36865 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12219 chr3R 24625113 24625250 + 17 NA Intergenic Intergenic -7267 FBgn0261289 FBgn0261289 FBtr0085312 CheB98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6419 chr2RHet 865644 865938 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_303 chr2L 1575470 1575555 + 17 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 11643 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4908 chr2R 9142835 9142890 + 17 NA Intergenic Intergenic -1020 FBgn0033819 FBgn0033819 FBtr0087756 CG4714 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12645 chr3R 26984074 26984298 + 17 NA exon (FBgn0086704, exon 9 of 9) protein_coding-exon (FBgn0086704, exon 9 of 9) 10639 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_86 chr2L 786287 786357 + 17 NA TTS (FBgn0031279) protein_coding-TTS (FBgn0031279) 1986 FBgn0031279 FBgn0031279 FBtr0078007 CG3544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5564 chr2R 14947653 14947858 + 17 NA exon (FBgn0034416, exon 2 of 2) protein_coding-exon (FBgn0034416, exon 2 of 2) 829 FBgn0034416 FBgn0034416 FBtr0100137 CG15109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9289 chr3R 2955565 2955665 + 17 NA promoter-TSS (FBgn0051494) tRNA-promoter-TSS (FBgn0051494) 29 FBgn0051494 FBgn0051494 FBtr0081565 tRNA:CR31494 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2940 chr2L 18861122 18861176 + 17 NA exon (FBgn0003896, exon 8 of 9) protein_coding-exon (FBgn0003896, exon 8 of 9) -1903 FBgn0032720 FBgn0032720 FBtr0089318 mRpL13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5495 chr2R 14357333 14357464 + 17 NA exon (FBgn0028496, exon 9 of 19) protein_coding-exon (FBgn0028496, exon 9 of 19) -15431 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10000 chr3R 8760136 8760274 + 17 NA exon (FBgn0038092, exon 7 of 7) protein_coding-exon (FBgn0038092, exon 7 of 7) 18361 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_224 chr2L 1365288 1365385 + 17 NA Intergenic Intergenic -2753 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8770 chr3L 23717517 23717879 + 17 NA Intergenic Intergenic -2231 FBgn0058298 FBgn0058298 FBtr0111169 CG40298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11219 chr3R 17328009 17328122 + 17 NA exon (FBgn0004863, exon 2 of 4) protein_coding-exon (FBgn0004863, exon 2 of 4) 2088 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3468 chr2L 21786101 21786247 + 17 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) -2109 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8144 chr3L 15420147 15420201 + 17 NA Intergenic Intergenic -10127 FBgn0263616 FBgn0263616 FBtr0309981 CR43625 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11763 chr3R 22870884 22871086 + 17 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -3957 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8979 chr3R 655902 656145 + 17 NA TTS (FBgn0037284) protein_coding-TTS (FBgn0037284) 212 FBgn0037283 FBgn0037283 FBtr0078874 CG14658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8468 chr3L 18056385 18056591 + 17 NA intron (FBgn0000568, intron 1 of 7) protein_coding-intron (FBgn0000568, intron 1 of 7) 1308 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7884 chr3L 13232179 13232490 + 17 NA intron (FBgn0023095, intron 2 of 4) protein_coding-intron (FBgn0023095, intron 2 of 4) 9468 FBgn0052119 FBgn0052119 FBtr0075867 CG32119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12417 chr3R 25528143 25528262 + 17 NA Intergenic Intergenic 9889 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13000 chr4 1000900 1001021 + 17 NA Intergenic Intergenic 5166 FBgn0083990 FBgn0083990 FBtr0111046 sphinx ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3574 chr2L 22022813 22022939 + 17 NA exon (FBgn0028979, exon 2 of 3) protein_coding-exon (FBgn0028979, exon 2 of 3) 2841 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9541 chr3R 4987782 4987836 + 17 NA intron (FBgn0003165, intron 8 of 12) protein_coding-intron (FBgn0003165, intron 8 of 12) -4137 FBgn0003165 FBgn0003165 FBtr0305197 pum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4786 chr2R 8019066 8019137 + 17 NA Intergenic Intergenic -7099 FBgn0033683 FBgn0033683 FBtr0087982 CG18343 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13204 chrU 2295879 2296005 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11683 chr3R 22484990 22485160 + 17 NA intron (FBgn0250908, intron 7 of 8) protein_coding-intron (FBgn0250908, intron 7 of 8) 2907 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9982 chr3R 8644390 8644578 + 17 NA Intergenic Intergenic -1733 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13793 chrX 17825898 17826089 + 17 NA intron (FBgn0003380, intron 10 of 12) protein_coding-intron (FBgn0003380, intron 10 of 12) 20497 FBgn0030884 FBgn0030884 FBtr0074505 CG6847 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6322 chr2RHet 146423 146687 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_682 chr2L 4689340 4689445 + 17 NA TTS (FBgn0031621) protein_coding-TTS (FBgn0031621) 1310 FBgn0031622 FBgn0031622 FBtr0077422 CG3251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7537 chr3L 10112999 10113053 + 17 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -19045 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4270 chr2R 4351286 4351481 + 17 NA exon (FBgn0050359, exon 3 of 6) protein_coding-exon (FBgn0050359, exon 3 of 6) 1076 FBgn0050359 FBgn0050359 FBtr0300953 Mal-A5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11258 chr3R 17636776 17636830 + 17 NA intron (FBgn0013759, intron 8 of 17) protein_coding-intron (FBgn0013759, intron 8 of 17) 11561 FBgn0013759 FBgn0013759 FBtr0084162 CASK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13505 chrX 3231413 3231539 + 17 NA exon (FBgn0000479, exon 10 of 15) protein_coding-exon (FBgn0000479, exon 10 of 15) -21041 FBgn0029656 FBgn0029656 FBtr0070536 CG10793 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11797 chr3R 23135199 23135276 + 17 NA exon (FBgn0039510, exon 18 of 32) protein_coding-exon (FBgn0039510, exon 18 of 32) 12810 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10940 chr3R 15426721 15426775 + 17 NA exon (FBgn0038715, exon 2 of 6) protein_coding-exon (FBgn0038715, exon 2 of 6) 391 FBgn0038715 FBgn0038715 FBtr0114553 CG7333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9685 chr3R 6280188 6280405 + 17 NA Intergenic Intergenic 19785 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10828 chr3R 14531546 14531786 + 17 NA exon (FBgn0015323, exon 1 of 2) protein_coding-exon (FBgn0015323, exon 1 of 2) 410 FBgn0000303 FBgn0000303 FBtr0089368 Cha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1620 chr2L 12185803 12185857 + 17 NA intron (FBgn0000114, intron 1 of 8) protein_coding-intron (FBgn0000114, intron 1 of 8) -8078 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3381 chr2L 21339391 21339546 + 17 NA exon (FBgn0023091, exon 2 of 2) protein_coding-exon (FBgn0023091, exon 2 of 2) -5139 FBgn0032943 FBgn0032943 FBtr0273404 Tsp39D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11988 chr3R 23851776 23851894 + 17 NA promoter-TSS (FBgn0085391) protein_coding-promoter-TSS (FBgn0085391) -499 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6192 chr2R 20260237 20260453 + 17 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) -1241 FBgn0053537 FBgn0053537 FBtr0100849 tRNA:N5:60C tRNA Nup98-S2-pascual-garcia2017_R1_peak_11984 chr3R 23840660 23840829 + 17 NA Intergenic Intergenic -11590 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9151 chr3R 2107650 2107769 + 17 NA exon (FBgn0037419, exon 2 of 2) protein_coding-exon (FBgn0037419, exon 2 of 2) 3213 FBgn0037420 FBgn0037420 FBtr0302305 CG15597 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1708 chr2L 12776467 12776608 + 17 NA Intergenic Intergenic -14697 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3593 chr2L 22056771 22057101 + 17 NA Intergenic Intergenic -2691 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13301 chrUextra 238295 238355 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7774 chr3L 12420759 12420819 + 17 NA exon (FBgn0036285, exon 2 of 6) protein_coding-exon (FBgn0036285, exon 2 of 6) 4979 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3347 chr2L 21188785 21189042 + 17 NA exon (FBgn0011829, exon 4 of 8) protein_coding-exon (FBgn0011829, exon 4 of 8) 6589 FBgn0011829 FBgn0011829 FBtr0081496 Ret protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12253 chr3R 24893813 24893977 + 17 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 4345 FBgn0039633 FBgn0039633 FBtr0330300 CG11873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8582 chr3L 20067392 20067501 + 17 NA exon (FBgn0036934, exon 2 of 3) protein_coding-exon (FBgn0036934, exon 2 of 3) 14661 FBgn0036934 FBgn0036934 FBtr0074871 sNPF-R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3452 chr2L 21767689 21767826 + 17 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 9747 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7845 chr3L 12936548 12936614 + 17 NA Intergenic Intergenic 11166 FBgn0036325 FBgn0036325 FBtr0075903 CG10752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3422 chr2L 21648448 21648637 + 17 NA TTS (FBgn0023416) protein_coding-TTS (FBgn0023416) -9014 FBgn0262620 FBgn0262620 FBtr0305481 CG43144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6236 chr2R 20591430 20591557 + 17 NA intron (FBgn0053988, intron 3 of 5) protein_coding-intron (FBgn0053988, intron 3 of 5) -9584 FBgn0035050 FBgn0035050 FBtr0072442 ST6Gal protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12983 chr4 939950 940110 + 17 NA exon (FBgn0023213, exon 8 of 16) protein_coding-exon (FBgn0023213, exon 8 of 16) 11317 FBgn0023213 FBgn0023213 FBtr0289951 eIF4G protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7443 chr3L 8779808 8779868 + 17 NA exon (FBgn0261259, exon 10 of 17) protein_coding-exon (FBgn0261259, exon 10 of 17) 1807 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4579 chr2R 6560928 6560982 + 17 NA exon (FBgn0024836, exon 1 of 6) protein_coding-exon (FBgn0024836, exon 1 of 6) 105 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6888 chr3L 2031339 2031393 + 17 NA Intergenic Intergenic 4375 FBgn0085288 FBgn0085288 FBtr0300030 CG34259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10179 chr3R 10140308 10140377 + 17 NA promoter-TSS (FBgn0013767) protein_coding-promoter-TSS (FBgn0013767) -234 FBgn0013767 FBgn0013767 FBtr0082927 Crz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4010 chr2R 1637283 1637360 + 17 NA Intergenic Intergenic -4712 FBgn0022288 FBgn0022288 FBtr0086043 l(2)09851 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13619 chrX 8800981 8801092 + 17 NA promoter-TSS (FBgn0011586) protein_coding-promoter-TSS (FBgn0011586) -1013 FBgn0011586 FBgn0011586 FBtr0071266 e(r) protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8650 chr3L 21597567 21597621 + 17 NA intron (FBgn0261953, intron 1 of 7) protein_coding-intron (FBgn0261953, intron 1 of 7) 9897 FBgn0264568 FBgn0264568 FBtr0333469 CR43940 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5946 chr2R 18130290 18130677 + 17 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -14759 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10086 chr3R 9400867 9400939 + 17 NA exon (FBgn0264430, exon 1 of 1) ncRNA-exon (FBgn0264430, exon 1 of 1) 356 FBgn0264430 FBgn0264430 FBtr0332550 CR43848 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12469 chr3R 25737086 25737656 + 17 NA exon (FBgn0051036, exon 7 of 9) protein_coding-exon (FBgn0051036, exon 7 of 9) 2697 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5831 chr2R 17263043 17263097 + 17 NA intron (FBgn0000395, intron 1 of 6) protein_coding-intron (FBgn0000395, intron 1 of 6) 3897 FBgn0000395 FBgn0000395 FBtr0071610 cv-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12422 chr3R 25531363 25531550 + 17 NA Intergenic Intergenic -8805 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4954 chr2R 9486678 9486879 + 17 NA TTS (FBgn0033860) protein_coding-TTS (FBgn0033860) 1739 FBgn0262360 FBgn0262360 FBtr0304641 CG43058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4176 chr2R 3443829 3443883 + 17 NA intron (FBgn0033192, intron 3 of 13) protein_coding-intron (FBgn0033192, intron 3 of 13) 9478 FBgn0050499 FBgn0050499 FBtr0310025 CG30499 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6712 chr3L 392659 392880 + 17 NA promoter-TSS (FBgn0262139) protein_coding-promoter-TSS (FBgn0262139) -825 FBgn0264700 FBgn0264700 FBtr0333900 CR43969 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5203 chr2R 11553389 11553514 + 17 NA promoter-TSS (FBgn0023441) protein_coding-promoter-TSS (FBgn0023441) -852 FBgn0023441 FBgn0023441 FBtr0087347 fus protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4455 chr2R 5613162 5613312 + 17 NA intron (FBgn0259678, intron 1 of 8) protein_coding-intron (FBgn0259678, intron 1 of 7) 13408 FBgn0010316 FBgn0010316 FBtr0088469 dap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1992 chr2L 14454655 14454757 + 17 NA Intergenic Intergenic -3784 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3810 chr2L 22704675 22704737 + 17 NA Intergenic Intergenic -13698 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5692 chr2R 16016625 16016836 + 17 NA Intergenic Intergenic -16908 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4128 chr2R 3211415 3211469 + 17 NA exon (FBgn0033159, exon 19 of 24) protein_coding-exon (FBgn0033159, exon 19 of 24) 12529 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13082 chrU 156716 156914 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6323 chr2RHet 154130 154261 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1845 chr2L 13912329 13912410 + 17 NA TTS (FBgn0032535) protein_coding-TTS (FBgn0032535) 230 FBgn0025115 FBgn0025115 FBtr0080555 Acyp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7244 chr3L 6913577 6913690 + 17 NA Intergenic Intergenic -6569 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4181 chr2R 3593373 3593605 + 17 NA intron (FBgn0003733, intron 11 of 14) protein_coding-intron (FBgn0003733, intron 10 of 13) -1047 FBgn0085245 FBgn0085245 FBtr0112409 CG34216 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2861 chr2L 18210626 18210805 + 17 NA exon (FBgn0261804, exon 5 of 15) protein_coding-exon (FBgn0261804, exon 5 of 15) -1478 FBgn0051802 FBgn0051802 FBtr0081058 CG31802 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11155 chr3R 16724752 16724806 + 17 NA Intergenic Intergenic -1737 FBgn0038839 FBgn0038839 FBtr0083986 CG10830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5355 chr2R 13090906 13091128 + 17 NA Intergenic Intergenic -1696 FBgn0262882 FBgn0262882 FBtr0306290 CG43237 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7084 chr3L 5333983 5334109 + 17 NA Intergenic Intergenic -1138 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_4119 chr2R 3178341 3178509 + 17 NA intron (FBgn0003174, intron 3 of 10) protein_coding-intron (FBgn0003174, intron 2 of 8) 8348 FBgn0003174 FBgn0003174 FBtr0332462 pwn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2062 chr2L 14717830 14717907 + 17 NA Intergenic Intergenic 4091 FBgn0085194 FBgn0085194 FBtr0112356 CG34165 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2555 chr2L 16954697 16954807 + 17 NA Intergenic Intergenic -9378 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10022 chr3R 8899815 8900128 + 17 NA exon (FBgn0004666, exon 3 of 8) protein_coding-exon (FBgn0004666, exon 3 of 8) -11975 FBgn0262365 FBgn0262365 FBtr0304647 CG43063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8161 chr3L 15640205 15640529 + 17 NA exon (FBgn0259236, exon 1 of 2) protein_coding-exon (FBgn0259236, exon 1 of 2) -1304 FBgn0262529 FBgn0262529 FBtr0304969 CG43083 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2865 chr2L 18243866 18244027 + 17 NA intron (FBgn0261804, intron 3 of 14) protein_coding-intron (FBgn0261804, intron 3 of 14) -7461 FBgn0263325 FBgn0263325 FBtr0308756 CG43406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13193 chrU 1973203 1973880 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3274 chr2L 20696251 20696305 + 17 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 13908 FBgn0032877 FBgn0032877 FBtr0081391 CG2617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8801 chr3L 23930646 23930794 + 17 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 28501 FBgn0264570 FBgn0264570 FBtr0333470 CR43942 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2516 chr2L 16757195 16757297 + 17 NA TTS (FBgn0032602) protein_coding-TTS (FBgn0032602) 2892 FBgn0032602 FBgn0032602 FBtr0080933 CG13278 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10920 chr3R 15312921 15312975 + 17 NA intron (FBgn0260003, intron 12 of 35) protein_coding-intron (FBgn0260003, intron 12 of 34) 3889 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13696 chrX 12927474 12927700 + 17 NA exon (FBgn0261379, exon 4 of 5) protein_coding-exon (FBgn0261379, exon 4 of 5) -2435 FBgn0261388 FBgn0261388 FBtr0302270 CG42629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1014 chr2L 7782047 7782438 + 17 NA promoter-TSS (FBgn0031947) protein_coding-promoter-TSS (FBgn0031947) -615 FBgn0031947 FBgn0031947 FBtr0079488 CG7154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3247 chr2L 20563961 20564088 + 17 NA Intergenic Intergenic 1600 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10694 chr3R 13715305 13715425 + 17 NA exon (FBgn0053547, exon 15 of 27) protein_coding-exon (FBgn0053547, exon 15 of 27) -16821 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7940 chr3L 13650042 13650110 + 17 NA intron (FBgn0264001, intron 2 of 11) protein_coding-intron (FBgn0264001, intron 2 of 12) 36139 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11240 chr3R 17544059 17544329 + 17 NA exon (FBgn0051176, exon 1 of 3) protein_coding-exon (FBgn0051176, exon 1 of 3) 1186 FBgn0051176 FBgn0051176 FBtr0084114 CG31176 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1223 chr2L 8832959 8833126 + 17 NA Intergenic Intergenic 7417 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11046 chr3R 15980945 15981002 + 17 NA Intergenic Intergenic -14185 FBgn0038774 FBgn0038774 FBtr0083866 CG5023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3921 chr2R 445644 445805 + 17 NA intron (FBgn0046692, intron 1 of 3) protein_coding-intron (FBgn0046692, intron 1 of 3) 11543 FBgn0046692 FBgn0046692 FBtr0308810 Stlk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11359 chr3R 19095121 19095317 + 17 NA exon (FBgn0004882, exon 4 of 10) protein_coding-exon (FBgn0004882, exon 4 of 10) 813 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3588 chr2L 22051061 22051335 + 17 NA Intergenic Intergenic 3047 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7297 chr3L 7277716 7277770 + 17 NA exon (FBgn0035756, exon 4 of 13) protein_coding-exon (FBgn0035756, exon 4 of 13) -20723 FBgn0035755 FBgn0035755 FBtr0309299 CG14830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3840 chr2L 22896374 22896528 + 17 NA intron (FBgn0250907, intron 8 of 8) protein_coding-intron (FBgn0250907, intron 8 of 8) 21917 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3270 chr2L 20687399 20687491 + 17 NA exon (FBgn0014859, exon 4 of 5) protein_coding-exon (FBgn0014859, exon 4 of 5) 5075 FBgn0032877 FBgn0032877 FBtr0081391 CG2617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_941 chr2L 6897639 6898019 + 17 NA exon (FBgn0031866, exon 2 of 13) protein_coding-exon (FBgn0031866, exon 2 of 13) -4248 FBgn0262205 FBgn0262205 FBtr0304244 mir-932 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2017 chr2L 14556586 14556640 + 17 NA Intergenic Intergenic 7113 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3257 chr2L 20590834 20590916 + 17 NA Intergenic Intergenic 13321 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1800 chr2L 13432673 13432837 + 17 NA intron (FBgn0263354, intron 2 of 8) protein_coding-intron (FBgn0263354, intron 2 of 8) -2867 FBgn0026760 FBgn0026760 FBtr0080502 Tehao protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2287 chr2L 15542546 15542636 + 17 NA Intergenic Intergenic -4928 FBgn0259922 FBgn0259922 FBtr0300217 CG42448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12806 chr3R 27773973 27774041 + 17 NA intron (FBgn0011224, intron 5 of 15) protein_coding-intron (FBgn0011224, intron 4 of 13) 32884 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9725 chr3R 6518344 6518402 + 17 NA exon (FBgn0262717, exon 5 of 8) protein_coding-exon (FBgn0262717, exon 5 of 8) -3996 FBgn0037822 FBgn0037822 FBtr0082267 CG14683 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10546 chr3R 12699131 12699262 + 17 NA intron (FBgn0263610, intron 4 of 7) ncRNA-intron (FBgn0263610, intron 3 of 6) 17159 FBgn0262462 FBgn0262462 FBtr0304522 mir-iab-4 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1830 chr2L 13714053 13714119 + 17 NA exon (FBgn0051814, exon 2 of 13) protein_coding-exon (FBgn0051814, exon 2 of 13) 3224 FBgn0051814 FBgn0051814 FBtr0080580 CG31814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7692 chr3L 11804941 11804995 + 17 NA exon (FBgn0259140, exon 3 of 17) protein_coding-exon (FBgn0259140, exon 3 of 17) 2887 FBgn0259140 FBgn0259140 FBtr0332131 CG42255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4000 chr2R 1435320 1435374 + 17 NA exon (FBgn0050438, exon 4 of 6) protein_coding-exon (FBgn0050438, exon 4 of 6) 22945 FBgn0050438 FBgn0050438 FBtr0086070 CG30438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11963 chr3R 23724990 23725205 + 17 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 6468 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8614 chr3L 20706829 20706932 + 17 NA promoter-TSS (FBgn0085289) protein_coding-promoter-TSS (FBgn0085289) -320 FBgn0085289 FBgn0085289 FBtr0333482 CG34260 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10004 chr3R 8767874 8768180 + 17 NA Intergenic Intergenic -19447 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12820 chr3R 27870446 27870553 + 17 NA Intergenic Intergenic 6404 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13779 chrX 17001576 17001652 + 17 NA promoter-TSS (FBgn0260748) protein_coding-promoter-TSS (FBgn0260748) -1732 FBgn0065032 FBgn0065032 FBtr0113478 Arpc3B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5677 chr2R 15911389 15911488 + 17 NA Intergenic Intergenic -18946 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12512 chr3R 26085679 26085733 + 17 NA Intergenic Intergenic 6802 FBgn0039761 FBgn0039761 FBtr0085618 CG18404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7233 chr3L 6836628 6837037 + 17 NA Intergenic Intergenic 53574 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_611 chr2L 4276005 4276059 + 17 NA Intergenic Intergenic 3283 FBgn0031592 FBgn0031592 FBtr0077476 Art2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4272 chr2R 4356579 4356642 + 17 NA TTS (FBgn0033296) protein_coding-TTS (FBgn0033296) 2544 FBgn0033296 FBgn0033296 FBtr0088757 Mal-A7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13554 chrX 5640947 5641101 + 17 NA promoter-TSS (FBgn0029798) protein_coding-promoter-TSS (FBgn0029798) 263 FBgn0261383 FBgn0261383 FBtr0070842 IntS6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9370 chr3R 3544369 3544572 + 17 NA Intergenic Intergenic -3669 FBgn0037512 FBgn0037512 FBtr0081738 CG2616 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7133 chr3L 5989571 5989644 + 17 NA promoter-TSS (FBgn0052406) protein_coding-promoter-TSS (FBgn0052406) -701 FBgn0052406 FBgn0052406 FBtr0077037 CG32406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3878 chr2LHet 207672 207744 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12421 chr3R 25530590 25530714 + 17 NA Intergenic Intergenic -9609 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8017 chr3L 14155584 14155638 + 17 NA Intergenic Intergenic 16109 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11664 chr3R 22433865 22434038 + 17 NA Intergenic Intergenic -10894 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2458 chr2L 16382223 16382537 + 17 NA Intergenic Intergenic 16461 FBgn0028841 FBgn0028841 FBtr0080859 jhamt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9979 chr3R 8635691 8635769 + 17 NA Intergenic Intergenic 7021 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1324 chr2L 9260835 9260955 + 17 NA intron (FBgn0028433, intron 2 of 3) protein_coding-intron (FBgn0028433, intron 2 of 3) 4332 FBgn0263984 FBgn0263984 FBtr0330020 CG43733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10464 chr3R 12234767 12234884 + 17 NA Intergenic Intergenic -5413 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6935 chr3L 2531445 2531580 + 17 NA intron (FBgn0010905, intron 3 of 16) protein_coding-intron (FBgn0010905, intron 3 of 15) -4539 FBgn0260480 FBgn0260480 FBtr0072962 CG32295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12319 chr3R 25223765 25223928 + 17 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -78510 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12872 chr3RHet 1593975 1594032 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11307 chr3R 18165851 18165936 + 17 NA exon (FBgn0038944, exon 1 of 2) protein_coding-exon (FBgn0038944, exon 1 of 2) 136 FBgn0038944 FBgn0038944 FBtr0084241 CG5388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2645 chr2L 17262781 17262930 + 17 NA Intergenic Intergenic -2123 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3204 chr2L 20395957 20396119 + 17 NA intron (FBgn0032857, intron 1 of 1) protein_coding-intron (FBgn0032857, intron 1 of 1) 3356 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8453 chr3L 17966227 17966380 + 17 NA intron (FBgn0000568, intron 4 of 7) protein_coding-intron (FBgn0000568, intron 2 of 5) 29875 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3703 chr2L 22350987 22351387 + 17 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -3168 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9086 chr3R 1596346 1596400 + 17 NA intron (FBgn0027608, intron 1 of 8) protein_coding-intron (FBgn0027608, intron 2 of 8) -8658 FBgn0037374 FBgn0037374 FBtr0078625 jagn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5442 chr2R 13890770 13890894 + 17 NA intron (FBgn0034286, intron 1 of 6) protein_coding-intron (FBgn0034286, intron 1 of 6) 4538 FBgn0034286 FBgn0034286 FBtr0300215 dpr13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3713 chr2L 22376246 22376300 + 17 NA Intergenic Intergenic 21918 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13637 chrX 9839092 9839146 + 17 NA Intergenic Intergenic -14107 FBgn0026415 FBgn0026415 FBtr0071394 Idgf4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7307 chr3L 7397070 7397190 + 17 NA promoter-TSS (FBgn0035781) protein_coding-promoter-TSS (FBgn0035781) -81 FBgn0035781 FBgn0035781 FBtr0332725 CG8560 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6382 chr2RHet 604397 604451 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12573 chr3R 26723297 26723581 + 17 NA exon (FBgn0015032, exon 3 of 8) protein_coding-exon (FBgn0015032, exon 3 of 8) 3756 FBgn0015032 FBgn0015032 FBtr0085712 Cyp4c3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1411 chr2L 10040658 10040712 + 17 NA Intergenic Intergenic 7991 FBgn0027600 FBgn0027600 FBtr0079934 obst-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2678 chr2L 17364510 17364641 + 17 NA TTS (FBgn0051804) protein_coding-TTS (FBgn0051804) 1079 FBgn0051804 FBgn0051804 FBtr0080967 CG31804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6825 chr3L 1384480 1384542 + 17 NA exon (FBgn0003295, exon 2 of 4) protein_coding-exon (FBgn0003295, exon 2 of 4) 3982 FBgn0052329 FBgn0052329 FBtr0072684 tRNA:CR32329 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12404 chr3R 25518542 25518849 + 17 NA intron (FBgn0039683, intron 1 of 3) protein_coding-intron (FBgn0039683, intron 1 of 3) 382 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3131 chr2L 19977098 19977278 + 17 NA intron (FBgn0264443, intron 3 of 5) protein_coding-intron (FBgn0264443, intron 3 of 5) -1641 FBgn0263611 FBgn0263611 FBtr0309974 CR43620 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11805 chr3R 23149412 23149481 + 17 NA Intergenic Intergenic -1399 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1098 chr2L 8567070 8567139 + 17 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -3784 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10194 chr3R 10264428 10264661 + 17 NA intron (FBgn0086901, intron 3 of 15) protein_coding-intron (FBgn0086901, intron 2 of 14) 20229 FBgn0085417 FBgn0085417 FBtr0301081 CG34388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9962 chr3R 8551576 8551709 + 17 NA Intergenic Intergenic -6128 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7063 chr3L 4843035 4843142 + 17 NA Intergenic Intergenic -2992 FBgn0035578 FBgn0035578 FBtr0308822 CG13707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5073 chr2R 10537052 10537224 + 17 NA Intergenic Intergenic 4362 FBgn0033951 FBgn0033951 FBtr0087433 CG10139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1877 chr2L 14056211 14056277 + 17 NA intron (FBgn0028875, intron 2 of 13) protein_coding-intron (FBgn0028875, intron 2 of 13) 8662 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7624 chr3L 10924168 10924553 + 17 NA Intergenic Intergenic -13196 FBgn0054050 FBgn0054050 FBtr0100105 CG34050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12108 chr3R 24281554 24281623 + 17 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) -28691 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_395 chr2L 2467099 2467259 + 17 NA Intergenic Intergenic 4586 FBgn0012016 FBgn0012016 FBtr0089298 tRNA:Y1:22Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_13828 chrX 19725550 19725724 + 17 NA TTS (FBgn0261811) protein_coding-TTS (FBgn0261811) -7605 FBgn0031074 FBgn0031074 FBtr0074806 skpE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10695 chr3R 13716785 13717068 + 17 NA exon (FBgn0053547, exon 12 of 27) protein_coding-exon (FBgn0053547, exon 12 of 27) -15260 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10281 chr3R 11213653 11213757 + 17 NA exon (FBgn0262483, exon 8 of 14) protein_coding-exon (FBgn0262483, exon 8 of 14) -5032 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_768 chr2L 5488470 5488532 + 17 NA Intergenic Intergenic 26860 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12004 chr3R 23908985 23909313 + 17 NA exon (FBgn0085391, exon 8 of 10) protein_coding-exon (FBgn0085391, exon 8 of 10) 56815 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3978 chr2R 970785 970839 + 17 NA promoter-TSS (FBgn0263092) pseudogene-promoter-TSS (FBgn0263092) -876 FBgn0263092 FBgn0263092 FBtr0307111 CR43360 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7705 chr3L 11895031 11895085 + 17 NA Intergenic Intergenic 3353 FBgn0263615 FBgn0263615 FBtr0309979 CR43624 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8601 chr3L 20349855 20349913 + 17 NA promoter-TSS (FBgn0024887) protein_coding-promoter-TSS (FBgn0024887) -23 FBgn0024887 FBgn0024887 FBtr0078181 kin17 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2408 chr2L 16076673 16076768 + 17 NA exon (FBgn0013433, exon 4 of 8) protein_coding-exon (FBgn0013433, exon 4 of 8) -18289 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4271 chr2R 4351686 4351891 + 17 NA promoter-TSS (FBgn0050360) protein_coding-promoter-TSS (FBgn0050360) -887 FBgn0050360 FBgn0050360 FBtr0273322 Mal-A6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8228 chr3L 16245477 16245565 + 17 NA promoter-TSS (FBgn0036583) protein_coding-promoter-TSS (FBgn0036583) -66 FBgn0036583 FBgn0036583 FBtr0075482 CG13055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4362 chr2R 4907233 4907303 + 17 NA TTS (FBgn0033364) protein_coding-TTS (FBgn0033364) 1908 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7929 chr3L 13562281 13562589 + 17 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -49730 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9184 chr3R 2344487 2344553 + 17 NA Intergenic Intergenic -8731 FBgn0037449 FBgn0037449 FBtr0081675 CG15185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13027 chr4 1175952 1176094 + 17 NA intron (FBgn0039925, intron 2 of 4) protein_coding-intron (FBgn0039925, intron 2 of 4) 7931 FBgn0039925 FBgn0039925 FBtr0089196 Kif3C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2280 chr2L 15523002 15523058 + 17 NA exon (FBgn0264261, exon 2 of 3) ncRNA-exon (FBgn0264261, exon 2 of 3) 592 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10256 chr3R 10883018 10883270 + 17 NA exon (FBgn0038282, exon 8 of 8) protein_coding-exon (FBgn0038282, exon 8 of 8) 19783 FBgn0038282 FBgn0038282 FBtr0089376 dpr9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4639 chr2R 7161157 7161288 + 17 NA TTS (FBgn0010423) protein_coding-TTS (FBgn0010423) -1203 FBgn0033603 FBgn0033603 FBtr0302719 Cpr47Ef protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4112 chr2R 3092644 3092866 + 17 NA intron (FBgn0003090, intron 2 of 6) protein_coding-intron (FBgn0003090, intron 1 of 5) 17988 FBgn0003090 FBgn0003090 FBtr0089044 pk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7524 chr3L 10012134 10012188 + 17 NA intron (FBgn0040823, intron 2 of 6) protein_coding-intron (FBgn0040823, intron 2 of 5) 44410 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6534 chr2RHet 1902821 1902875 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3842 chr2L 22899942 22900111 + 17 NA intron (FBgn0250907, intron 5 of 8) protein_coding-intron (FBgn0250907, intron 5 of 8) 18534 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2740 chr2L 17751341 17751572 + 17 NA intron (FBgn0015609, intron 3 of 23) protein_coding-intron (FBgn0015609, intron 1 of 21) 890 FBgn0015609 FBgn0015609 FBtr0100316 CadN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5914 chr2R 17851006 17851385 + 17 NA promoter-TSS (FBgn0085398) protein_coding-promoter-TSS (FBgn0085398) -483 FBgn0085398 FBgn0085398 FBtr0112594 CG34369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1188 chr2L 8782180 8782234 + 17 NA promoter-TSS (FBgn0032069) protein_coding-promoter-TSS (FBgn0032069) 287 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3475 chr2L 21816552 21816649 + 17 NA Intergenic Intergenic -11993 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4188 chr2R 3721857 3721939 + 17 NA TTS (FBgn0033229) protein_coding-TTS (FBgn0033229) 2027 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9854 chr3R 7597937 7598035 + 17 NA promoter-TSS (FBgn0086910) protein_coding-promoter-TSS (FBgn0086910) 6085 FBgn0086910 FBgn0086910 FBtr0082533 l(3)neo38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2230 chr2L 15376064 15376265 + 17 NA Intergenic Intergenic -14537 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8061 chr3L 14522957 14523020 + 17 NA intron (FBgn0087007, intron 2 of 8) protein_coding-intron (FBgn0087007, intron 2 of 8) 6388 FBgn0087007 FBgn0087007 FBtr0273426 bbg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8089 chr3L 14862571 14862690 + 17 NA exon (FBgn0036454, exon 10 of 19) protein_coding-exon (FBgn0036454, exon 10 of 19) 24886 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3970 chr2R 857879 858663 + 17 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 21099 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13519 chrX 3705641 3705816 + 17 NA promoter-TSS (FBgn0000542) protein_coding-promoter-TSS (FBgn0000542) 7510 FBgn0061173 FBgn0061173 FBtr0070602 fd3F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12561 chr3R 26684040 26684115 + 17 NA Intergenic Intergenic 6040 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6566 chr2RHet 1945001 1945237 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3041 chr2L 19509626 19509721 + 17 NA promoter-TSS (FBgn0032796) protein_coding-promoter-TSS (FBgn0032796) -913 FBgn0032796 FBgn0032796 FBtr0329963 CG10188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6109 chr2R 19534072 19534133 + 17 NA intron (FBgn0004795, intron 5 of 11) protein_coding-intron (FBgn0004795, intron 5 of 11) -10992 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2227 chr2L 15370351 15370751 + 17 NA Intergenic Intergenic -8924 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3539 chr2L 21961995 21962049 + 17 NA Intergenic Intergenic 30911 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3586 chr2L 22042198 22042359 + 17 NA exon (FBgn0051601, exon 6 of 7) protein_coding-exon (FBgn0051601, exon 6 of 7) 1509 FBgn0051601 FBgn0051601 FBtr0308578 CG31601 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6161 chr2R 20099533 20099722 + 17 NA TTS (FBgn0050419) protein_coding-TTS (FBgn0050419) -5181 FBgn0034990 FBgn0034990 FBtr0072276 CG11406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3668 chr2L 22258000 22258054 + 17 NA exon (FBgn0032988, exon 6 of 6) protein_coding-exon (FBgn0032988, exon 6 of 6) 8149 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11702 chr3R 22532097 22532151 + 17 NA intron (FBgn0023179, intron 1 of 11) protein_coding-intron (FBgn0023179, intron 1 of 11) 7757 FBgn0023179 FBgn0023179 FBtr0085048 amon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12734 chr3R 27375949 27376130 + 17 NA intron (FBgn0039852, intron 2 of 8) protein_coding-intron (FBgn0039852, intron 2 of 8) 7154 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12246 chr3R 24811411 24811608 + 17 NA Intergenic Intergenic -15433 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9477 chr3R 4363266 4363330 + 17 NA Intergenic Intergenic -8699 FBgn0040531 FBgn0040531 FBtr0112769 CG11741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9336 chr3R 3186399 3186578 + 17 NA TTS (FBgn0037500) protein_coding-TTS (FBgn0037500) 1357 FBgn0037500 FBgn0037500 FBtr0081590 CG17944 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8167 chr3L 15744581 15744635 + 17 NA Intergenic Intergenic -23078 FBgn0010105 FBgn0010105 FBtr0075579 comm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2144 chr2L 14995884 14995955 + 17 NA intron (FBgn0086711, intron 1 of 5) protein_coding-intron (FBgn0086711, intron 1 of 7) 1640 FBgn0086711 FBgn0086711 FBtr0332521 mol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8701 chr3L 22448691 22448864 + 17 NA exon (FBgn0037162, exon 1 of 1) protein_coding-exon (FBgn0037162, exon 1 of 1) 1304 FBgn0037162 FBgn0037162 FBtr0078503 CG11449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13489 chrX 2480366 2480476 + 17 NA promoter-TSS (FBgn0040375) protein_coding-promoter-TSS (FBgn0040375) 411 FBgn0040066 FBgn0040066 FBtr0070438 wds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3211 chr2L 20470485 20470686 + 17 NA Intergenic Intergenic 2754 FBgn0262878 FBgn0262878 FBtr0306287 CG43233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4157 chr2R 3316695 3316925 + 17 NA promoter-TSS (FBgn0033168) protein_coding-promoter-TSS (FBgn0033168) -712 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_430 chr2L 2705328 2705683 + 17 NA intron (FBgn0051690, intron 3 of 7) protein_coding-intron (FBgn0051690, intron 4 of 8) -9068 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_763 chr2L 5466438 5466678 + 17 NA exon (FBgn0261963, exon 4 of 4) protein_coding-exon (FBgn0261963, exon 4 of 4) 4917 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11482 chr3R 21682243 21682297 + 17 NA Intergenic Intergenic 4894 FBgn0039379 FBgn0039379 FBtr0084907 CG5886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2688 chr2L 17527764 17528115 + 17 NA exon (FBgn0032648, exon 4 of 4) protein_coding-exon (FBgn0032648, exon 4 of 4) 1131 FBgn0032648 FBgn0032648 FBtr0303652 CG15144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4228 chr2R 3943368 3943444 + 17 NA exon (FBgn0033252, exon 3 of 5) protein_coding-exon (FBgn0033252, exon 3 of 5) 2650 FBgn0033252 FBgn0033252 FBtr0088828 CG12769 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2045 chr2L 14629974 14630190 + 17 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 13813 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7734 chr3L 12153664 12153770 + 17 NA intron (FBgn0036259, intron 1 of 2) protein_coding-intron (FBgn0036259, intron 1 of 2) 3118 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4618 chr2R 6918979 6919182 + 17 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -54011 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11845 chr3R 23249402 23249618 + 17 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 13694 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13099 chrU 213041 213118 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13030 chr4 1210242 1210296 + 17 NA exon (FBgn0250819, exon 6 of 11) protein_coding-exon (FBgn0250819, exon 6 of 11) 3870 FBgn0250819 FBgn0250819 FBtr0308340 CG33521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1581 chr2L 11808917 11808996 + 17 NA promoter-TSS (FBgn0020309) protein_coding-promoter-TSS (FBgn0020309) 16 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2702 chr2L 17590889 17590943 + 17 NA TTS (FBgn0032652) protein_coding-TTS (FBgn0032652) 776 FBgn0032651 FBgn0032651 FBtr0303253 Oli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3343 chr2L 21087230 21087347 + 17 NA promoter-TSS (FBgn0053509) protein_coding-promoter-TSS (FBgn0053509) -782 FBgn0053509 FBgn0053509 FBtr0091449 CG33509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1560 chr2L 11665246 11665663 + 17 NA Intergenic Intergenic 7994 FBgn0262786 FBgn0262786 FBtr0305896 CG43167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11538 chr3R 21891498 21891552 + 17 NA Intergenic Intergenic -2792 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3103 chr2L 19824987 19825041 + 17 NA intron (FBgn0263873, intron 2 of 15) protein_coding-intron (FBgn0263873, intron 2 of 15) 8600 FBgn0043021 FBgn0043021 FBtr0081294 snRNA:U5:38ABb snRNA Nup98-S2-pascual-garcia2017_R1_peak_2167 chr2L 15103099 15103153 + 17 NA Intergenic Intergenic -6279 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6018 chr2R 18794565 18794791 + 17 NA intron (FBgn0034797, intron 2 of 11) protein_coding-intron (FBgn0034797, intron 2 of 10) 10982 FBgn0034797 FBgn0034797 FBtr0304795 nahoda protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5869 chr2R 17459658 17460059 + 17 NA promoter-TSS (FBgn0034636) protein_coding-promoter-TSS (FBgn0034636) 3682 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12278 chr3R 25015176 25015290 + 17 NA intron (FBgn0039647, intron 1 of 7) protein_coding-intron (FBgn0039647, intron 1 of 6) 5482 FBgn0039647 FBgn0039647 FBtr0113304 CG14509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10751 chr3R 14084045 14084377 + 17 NA TTS (FBgn0261019) protein_coding-TTS (FBgn0261019) 2959 FBgn0260241 FBgn0260241 FBtr0299939 tatl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8004 chr3L 14103033 14103228 + 17 NA Intergenic Intergenic -1912 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9160 chr3R 2138120 2138205 + 17 NA Intergenic Intergenic 2444 FBgn0051560 FBgn0051560 FBtr0078609 CG31560 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3051 chr2L 19607529 19607715 + 17 NA intron (FBgn0000464, intron 1 of 17) protein_coding-intron (FBgn0000464, intron 1 of 17) 20999 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11595 chr3R 22143776 22143874 + 17 NA promoter-TSS (FBgn0053970) protein_coding-promoter-TSS (FBgn0053970) 7172 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2608 chr2L 17109367 17109427 + 17 NA Intergenic Intergenic 16564 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3438 chr2L 21724235 21724490 + 17 NA intron (FBgn0051619, intron 16 of 19) protein_coding-intron (FBgn0051619, intron 15 of 18) 33104 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4560 chr2R 6273930 6274012 + 17 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) -6357 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3380 chr2L 21334044 21334120 + 17 NA intron (FBgn0023091, intron 1 of 2) protein_coding-intron (FBgn0023091, intron 1 of 2) 2326 FBgn0023091 FBgn0023091 FBtr0081514 dimm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9065 chr3R 1348885 1348970 + 17 NA promoter-TSS (FBgn0264427) ncRNA-promoter-TSS (FBgn0264427) 119 FBgn0010399 FBgn0010399 FBtr0078763 Nmdar1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10110 chr3R 9585161 9585279 + 17 NA exon (FBgn0085412, exon 9 of 13) protein_coding-exon (FBgn0085412, exon 9 of 13) -6277 FBgn0038179 FBgn0038179 FBtr0082825 CG9312 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_969 chr2L 7156509 7156563 + 17 NA exon (FBgn0085407, exon 1 of 6) protein_coding-exon (FBgn0085407, exon 1 of 6) -23009 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3182 chr2L 20287470 20287649 + 17 NA Intergenic Intergenic -7148 FBgn0040996 FBgn0040996 FBtr0081351 CG12617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6684 chr2RHet 3066537 3066591 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10873 chr3R 14940419 14940701 + 17 NA intron (FBgn0038679, intron 2 of 7) protein_coding-intron (FBgn0038679, intron 2 of 7) -9162 FBgn0038679 FBgn0038679 FBtr0304715 CG6040 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2196 chr2L 15210537 15210680 + 17 NA Intergenic Intergenic -4614 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13709 chrX 13239725 13239951 + 17 NA Intergenic Intergenic 7451 FBgn0030474 FBgn0030474 FBtr0073766 CG15747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6383 chr2RHet 604910 604990 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11299 chr3R 18115830 18115930 + 17 NA exon (FBgn0051163, exon 14 of 19) protein_coding-exon (FBgn0051163, exon 14 of 19) -2768 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1130 chr2L 8623681 8624112 + 17 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 3868 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5726 chr2R 16285234 16285288 + 17 NA Intergenic Intergenic -26579 FBgn0086604 FBgn0086604 FBtr0112774 CG12484 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9096 chr3R 1673703 1673757 + 17 NA promoter-TSS (FBgn0037389) pseudogene-promoter-TSS (FBgn0037389) 788 FBgn0037388 FBgn0037388 FBtr0078645 CG14676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4693 chr2R 7467238 7467378 + 17 NA exon (FBgn0033636, exon 17 of 17) protein_coding-exon (FBgn0033636, exon 17 of 17) 8528 FBgn0082993 FBgn0082993 FBtr0113499 snoRNA:Psi28S-1936 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6652 chr2RHet 2353314 2353529 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2014 chr2L 14545365 14545419 + 17 NA Intergenic Intergenic 3683 FBgn0250844 FBgn0250844 FBtr0080662 CG4218 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4352 chr2R 4852760 4852830 + 17 NA exon (FBgn0033358, exon 2 of 6) protein_coding-exon (FBgn0033358, exon 2 of 6) 2892 FBgn0033358 FBgn0033358 FBtr0088671 CG8216 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8684 chr3L 22245977 22246120 + 17 NA Intergenic Intergenic 9947 FBgn0028500 FBgn0028500 FBtr0078512 Rich protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3843 chr2L 22900881 22900963 + 17 NA intron (FBgn0250907, intron 5 of 8) protein_coding-intron (FBgn0250907, intron 5 of 8) 17638 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11562 chr3R 21988020 21988164 + 17 NA Intergenic Intergenic -8479 FBgn0051323 FBgn0051323 FBtr0307339 CG31323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12864 chr3RHet 1412678 1412869 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7535 chr3L 10102881 10102957 + 17 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -8938 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11319 chr3R 18364013 18364148 + 17 NA intron (FBgn0038983, intron 1 of 4) protein_coding-intron (FBgn0038983, intron 1 of 4) 1559 FBgn0038983 FBgn0038983 FBtr0084285 CG5326 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12397 chr3R 25510434 25510501 + 17 NA TTS (FBgn0039682) protein_coding-TTS (FBgn0039682) 2242 FBgn0013972 FBgn0013972 FBtr0085453 Gycalpha99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3143 chr2L 20036203 20036275 + 17 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 8324 FBgn0032840 FBgn0032840 FBtr0081327 sNPF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_561 chr2L 3832309 3832363 + 17 NA Intergenic Intergenic -4506 FBgn0004567 FBgn0004567 FBtr0077500 slp2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2104 chr2L 14877515 14877630 + 17 NA Intergenic Intergenic -1336 FBgn0032554 FBgn0032554 FBtr0305558 CG15278 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9481 chr3R 4372912 4373029 + 17 NA Intergenic Intergenic -5360 FBgn0037594 FBgn0037594 FBtr0081872 Or85d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4959 chr2R 9510541 9510628 + 17 NA promoter-TSS (FBgn0000633) protein_coding-promoter-TSS (FBgn0000633) -9 FBgn0000633 FBgn0000633 FBtr0087625 fas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1443 chr2L 10603046 10603100 + 17 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -21411 FBgn0085190 FBgn0085190 FBtr0112352 CG34161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6685 chr2RHet 3133692 3133754 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9506 chr3R 4519581 4519729 + 17 NA exon (FBgn0001180, exon 2 of 2) protein_coding-exon (FBgn0001180, exon 2 of 2) 667 FBgn0001180 FBgn0001180 FBtr0081951 hb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12455 chr3R 25650854 25650921 + 17 NA exon (FBgn0039704, exon 8 of 8) protein_coding-exon (FBgn0039704, exon 8 of 8) 6053 FBgn0039704 FBgn0039704 FBtr0085486 neo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11428 chr3R 20497049 20497166 + 17 NA TTS (FBgn0261637) protein_coding-TTS (FBgn0261637) 1021 FBgn0261637 FBgn0261637 FBtr0303007 CG42720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2324 chr2L 15651875 15652069 + 17 NA exon (FBgn0028863, exon 3 of 13) protein_coding-exon (FBgn0028863, exon 3 of 13) -9069 FBgn0028864 FBgn0028864 FBtr0080756 CG18477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11038 chr3R 15951032 15951271 + 17 NA Intergenic Intergenic 4369 FBgn0045471 FBgn0045471 FBtr0083865 Gr92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13750 chrX 15170924 15171077 + 17 NA Intergenic Intergenic -5068 FBgn0030624 FBgn0030624 FBtr0074022 CG9106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11995 chr3R 23880777 23880924 + 17 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 28516 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1299 chr2L 9024660 9024899 + 17 NA exon (FBgn0032090, exon 1 of 1) protein_coding-exon (FBgn0032090, exon 1 of 1) 625 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1273 chr2L 8915712 8916175 + 17 NA exon (FBgn0085427, exon 2 of 11) protein_coding-exon (FBgn0085427, exon 2 of 11) 17139 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11133 chr3R 16552182 16552338 + 17 NA Intergenic Intergenic -5093 FBgn0051205 FBgn0051205 FBtr0300451 CG31205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7546 chr3L 10200176 10200230 + 17 NA Intergenic Intergenic -5578 FBgn0000451 FBgn0000451 FBtr0301385 ect protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1647 chr2L 12393396 12393488 + 17 NA exon (FBgn0262475, exon 8 of 10) protein_coding-exon (FBgn0262475, exon 8 of 10) -4832 FBgn0041195 FBgn0041195 FBtr0080365 Pkd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2168 chr2L 15107150 15107574 + 17 NA Intergenic Intergenic -2043 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3212 chr2L 20474885 20474998 + 17 NA Intergenic Intergenic -1602 FBgn0262878 FBgn0262878 FBtr0306287 CG43233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_451 chr2L 2937999 2938053 + 17 NA intron (FBgn0041111, intron 3 of 12) protein_coding-intron (FBgn0041111, intron 3 of 12) -18885 FBgn0010263 FBgn0010263 FBtr0077640 Rbp9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8171 chr3L 15768977 15769126 + 17 NA Intergenic Intergenic -32371 FBgn0036531 FBgn0036531 FBtr0075502 CG6244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12005 chr3R 23911919 23912010 + 17 NA TTS (FBgn0085391) protein_coding-TTS (FBgn0085391) 59630 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11486 chr3R 21690861 21690915 + 17 NA Intergenic Intergenic -1934 FBgn0039380 FBgn0039380 FBtr0301147 CG5890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13565 chrX 5901755 5901889 + 17 NA TTS (FBgn0029003) protein_coding-TTS (FBgn0029003) 5389 FBgn0029003 FBgn0029003 FBtr0070890 mab-21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6003 chr2R 18663656 18663710 + 17 NA intron (FBgn0259145, intron 2 of 11) protein_coding-intron (FBgn0259145, intron 2 of 11) -8126 FBgn0061435 FBgn0061435 FBtr0300125 CG30270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2565 chr2L 16984726 16984800 + 17 NA promoter-TSS (FBgn0051806) protein_coding-promoter-TSS (FBgn0051806) -215 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1240 chr2L 8863323 8863386 + 17 NA promoter-TSS (FBgn0052987) protein_coding-promoter-TSS (FBgn0052987) -457 FBgn0052987 FBgn0052987 FBtr0079735 CG32987 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2694 chr2L 17562224 17562318 + 17 NA Intergenic Intergenic -4155 FBgn0262398 FBgn0262398 FBtr0304299 mir-124 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7296 chr3L 7272283 7272354 + 17 NA exon (FBgn0035756, exon 6 of 13) protein_coding-exon (FBgn0035756, exon 6 of 13) -15298 FBgn0035755 FBgn0035755 FBtr0309299 CG14830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6808 chr3L 1204233 1204287 + 17 NA exon (FBgn0035189, exon 2 of 2) protein_coding-exon (FBgn0035189, exon 2 of 2) 532 FBgn0035189 FBgn0035189 FBtr0072635 CG9119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9536 chr3R 4845714 4845821 + 17 NA promoter-TSS (FBgn0264075) protein_coding-promoter-TSS (FBgn0264075) -28 FBgn0264075 FBgn0264075 FBtr0082005 tgo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9684 chr3R 6271167 6271244 + 17 NA Intergenic Intergenic 10694 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_121 chr2L 937257 937423 + 17 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 14547 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6024 chr2R 18843832 18844229 + 17 NA Intergenic Intergenic -2707 FBgn0052835 FBgn0052835 FBtr0308941 CR32835 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8581 chr3L 20055588 20055673 + 17 NA intron (FBgn0036934, intron 2 of 2) protein_coding-intron (FBgn0036934, intron 2 of 2) 26477 FBgn0036934 FBgn0036934 FBtr0074871 sNPF-R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7656 chr3L 11396960 11397025 + 17 NA Intergenic Intergenic 9202 FBgn0036156 FBgn0036156 FBtr0076172 CG11726 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2225 chr2L 15354594 15354710 + 17 NA Intergenic Intergenic 6975 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5006 chr2R 9828696 9828823 + 17 NA intron (FBgn0013733, intron 1 of 31) protein_coding-intron (FBgn0013733, intron 1 of 30) 2123 FBgn0033885 FBgn0033885 FBtr0087615 DJ-1alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8491 chr3L 18188399 18188671 + 17 NA Intergenic Intergenic -6059 FBgn0036782 FBgn0036782 FBtr0310156 CG7320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9140 chr3R 2047601 2047662 + 17 NA promoter-TSS (FBgn0037412) protein_coding-promoter-TSS (FBgn0037412) -128 FBgn0037412 FBgn0037412 FBtr0078615 Osi4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10715 chr3R 13852655 13852786 + 17 NA Intergenic Intergenic 3291 FBgn0038565 FBgn0038565 FBtr0083540 CG7794 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11753 chr3R 22850894 22850948 + 17 NA exon (FBgn0039476, exon 2 of 2) protein_coding-exon (FBgn0039476, exon 2 of 2) 910 FBgn0039476 FBgn0039476 FBtr0085149 CG6271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13137 chrU 1045026 1045104 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2120 chr2L 14919651 14919857 + 17 NA intron (FBgn0259213, intron 11 of 19) protein_coding-intron (FBgn0259213, intron 11 of 19) -4981 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7960 chr3L 13751317 13751430 + 17 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 45127 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5200 chr2R 11542396 11542495 + 17 NA Intergenic Intergenic -2182 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_9460 chr3R 4243754 4243808 + 17 NA intron (FBgn0263416, intron 2 of 15) protein_coding-intron (FBgn0263416, intron 2 of 15) 2538 FBgn0037589 FBgn0037589 FBtr0081849 Obp85a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10566 chr3R 12776794 12776861 + 17 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -19492 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7531 chr3L 10087567 10087673 + 17 NA exon (FBgn0052054, exon 1 of 3) protein_coding-exon (FBgn0052054, exon 1 of 3) 218 FBgn0052054 FBgn0052054 FBtr0076314 CG32054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5953 chr2R 18191557 18191611 + 17 NA intron (FBgn0034718, intron 1 of 1) protein_coding-intron (FBgn0034718, intron 2 of 2) 5871 FBgn0034718 FBgn0034718 FBtr0071852 wdp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5944 chr2R 18128019 18128138 + 17 NA Intergenic Intergenic -12354 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8670 chr3L 21915925 21916153 + 17 NA exon (FBgn0262737, exon 10 of 10) protein_coding-exon (FBgn0262737, exon 10 of 10) -11765 FBgn0037140 FBgn0037140 FBtr0078471 CG7442 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3399 chr2L 21381175 21381576 + 17 NA promoter-TSS (FBgn0032946) protein_coding-promoter-TSS (FBgn0032946) 1375 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10646 chr3R 13441595 13441776 + 17 NA Intergenic Intergenic -1798 FBgn0012002 FBgn0012002 FBtr0083466 tRNA:V3b:90BC tRNA Nup98-S2-pascual-garcia2017_R1_peak_11280 chr3R 17928263 17928319 + 17 NA promoter-TSS (FBgn0038931) protein_coding-promoter-TSS (FBgn0038931) -845 FBgn0038931 FBgn0038931 FBtr0084181 CG13407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6325 chr2RHet 155395 155536 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4266 chr2R 4296436 4296490 + 17 NA intron (FBgn0033289, intron 1 of 5) protein_coding-intron (FBgn0033289, intron 1 of 5) 2765 FBgn0033289 FBgn0033289 FBtr0088764 CG2121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1651 chr2L 12529488 12529707 + 17 NA intron (FBgn0259176, intron 5 of 7) protein_coding-intron (FBgn0259176, intron 5 of 7) -13579 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4122 chr2R 3186145 3186244 + 17 NA exon (FBgn0003174, exon 5 of 9) protein_coding-exon (FBgn0003174, exon 5 of 9) -12719 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7057 chr3L 4638645 4638700 + 17 NA intron (FBgn0262870, intron 20 of 20) protein_coding-intron (FBgn0262870, intron 20 of 20) -3883 FBgn0035563 FBgn0035563 FBtr0073319 CG13716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2553 chr2L 16946198 16946279 + 17 NA promoter-TSS (FBgn0262355) protein_coding-promoter-TSS (FBgn0262355) -864 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8569 chr3L 19651741 19651795 + 17 NA intron (FBgn0036899, intron 1 of 8) protein_coding-intron (FBgn0036899, intron 1 of 8) 5436 FBgn0036899 FBgn0036899 FBtr0331860 tey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8715 chr3L 22995486 22995540 + 17 NA exon (FBgn0262509, exon 2 of 23) protein_coding-exon (FBgn0262509, exon 2 of 23) 4041 FBgn0262509 FBgn0262509 FBtr0304836 nrm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5539 chr2R 14778228 14778467 + 17 NA intron (FBgn0034408, intron 2 of 7) protein_coding-intron (FBgn0034408, intron 2 of 7) -8587 FBgn0086022 FBgn0086022 FBtr0114298 snoRNA:Me28S-U1130 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2344 chr2L 15853343 15853552 + 17 NA promoter-TSS (FBgn0028902) protein_coding-promoter-TSS (FBgn0028902) -679 FBgn0028902 FBgn0028902 FBtr0080788 Tektin-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1733 chr2L 12885867 12886024 + 17 NA Intergenic Intergenic -26585 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9707 chr3R 6428392 6428616 + 17 NA intron (FBgn0001235, intron 2 of 12) protein_coding-intron (FBgn0001235, intron 2 of 11) 2888 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3982 chr2R 1020673 1020956 + 17 NA Intergenic Intergenic 4842 FBgn0262901 FBgn0262901 FBtr0306315 CR43256 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6569 chr2RHet 1951659 1951828 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1675 chr2L 12649995 12650049 + 17 NA Intergenic Intergenic -3666 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13133 chrU 566775 566879 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1451 chr2L 10662037 10662093 + 17 NA promoter-TSS (FBgn0051871) protein_coding-promoter-TSS (FBgn0051871) -22 FBgn0051871 FBgn0051871 FBtr0080104 CG31871 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1493 chr2L 11090142 11090303 + 17 NA exon (FBgn0032338, exon 2 of 2) protein_coding-exon (FBgn0032338, exon 2 of 2) -1220 FBgn0032339 FBgn0032339 FBtr0080196 CG4705 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7787 chr3L 12471576 12471630 + 17 NA intron (FBgn0036287, intron 2 of 7) protein_coding-intron (FBgn0036287, intron 2 of 7) 6451 FBgn0036287 FBgn0036287 FBtr0113167 CG10663 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7360 chr3L 8024658 8024787 + 17 NA intron (FBgn0011817, intron 3 of 8) protein_coding-intron (FBgn0011817, intron 3 of 9) -3004 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5928 chr2R 17967904 17967965 + 17 NA promoter-TSS (FBgn0034691) protein_coding-promoter-TSS (FBgn0034691) -256 FBgn0034691 FBgn0034691 FBtr0308239 synj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8560 chr3L 19422568 19422640 + 17 NA Intergenic Intergenic 4802 FBgn0262027 FBgn0262027 FBtr0303863 CR42838 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5782 chr2R 16835288 16835357 + 17 NA Intergenic Intergenic 1847 FBgn0065059 FBgn0065059 FBtr0091781 snoRNA:660 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_13800 chrX 18166978 18167137 + 17 NA Intergenic Intergenic -4209 FBgn0053542 FBgn0053542 FBtr0113465 upd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12730 chr3R 27370195 27370356 + 17 NA intron (FBgn0039852, intron 1 of 8) protein_coding-intron (FBgn0039852, intron 1 of 8) 1390 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7275 chr3L 7047434 7047578 + 17 NA TTS (FBgn0260660) protein_coding-TTS (FBgn0260660) -11908 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6277 chr2R 20986618 20986829 + 17 NA promoter-TSS (FBgn0003715) protein_coding-promoter-TSS (FBgn0003715) -12 FBgn0003715 FBgn0003715 FBtr0330231 CG16778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3805 chr2L 22685785 22686050 + 17 NA Intergenic Intergenic 5091 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9668 chr3R 6106252 6106306 + 17 NA intron (FBgn0262617, intron 1 of 13) protein_coding-intron (FBgn0262617, intron 1 of 11) -2422 FBgn0011970 FBgn0011970 FBtr0082241 tRNA:S2b:86A tRNA Nup98-S2-pascual-garcia2017_R1_peak_11387 chr3R 19558936 19558993 + 17 NA promoter-TSS (FBgn0263782) protein_coding-promoter-TSS (FBgn0263782) -233 FBgn0028691 FBgn0028691 FBtr0084470 Rpn9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10698 chr3R 13727173 13727311 + 17 NA intron (FBgn0053547, intron 7 of 26) protein_coding-intron (FBgn0053547, intron 7 of 26) -4944 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6572 chr2RHet 1955334 1955621 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5134 chr2R 10970954 10971022 + 17 NA Intergenic Intergenic -27242 FBgn0053467 FBgn0053467 FBtr0089861 CG33467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1061 chr2L 8253294 8253348 + 17 NA promoter-TSS (FBgn0032010) protein_coding-promoter-TSS (FBgn0032010) -355 FBgn0032010 FBgn0032010 FBtr0079621 CG8086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_305 chr2L 1577981 1578124 + 17 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 9103 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2779 chr2L 17885285 17885593 + 17 NA Intergenic Intergenic -8373 FBgn0263339 FBgn0263339 FBtr0308769 CR43420 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12283 chr3R 25025154 25025226 + 17 NA promoter-TSS (FBgn0014427) protein_coding-promoter-TSS (FBgn0014427) -984 FBgn0014427 FBgn0014427 FBtr0085390 CG11899 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2709 chr2L 17611034 17611243 + 17 NA Intergenic Intergenic 15208 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4384 chr2R 4961734 4961891 + 17 NA exon (FBgn0011746, exon 2 of 5) protein_coding-exon (FBgn0011746, exon 2 of 5) -4420 FBgn0025709 FBgn0025709 FBtr0088562 CG8083 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5426 chr2R 13716688 13716750 + 17 NA intron (FBgn0259211, intron 5 of 13) protein_coding-intron (FBgn0259211, intron 5 of 12) 5649 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9600 chr3R 5296278 5296480 + 17 NA exon (FBgn0037698, exon 9 of 12) protein_coding-exon (FBgn0037698, exon 9 of 12) -11481 FBgn0037697 FBgn0037697 FBtr0082042 CG9363 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12217 chr3R 24618285 24618441 + 17 NA Intergenic Intergenic 2119 FBgn0039599 FBgn0039599 FBtr0085311 CG12558 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2437 chr2L 16209194 16209260 + 17 NA Intergenic Intergenic -2232 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4984 chr2R 9669826 9669880 + 17 NA intron (FBgn0033867, intron 4 of 4) protein_coding-intron (FBgn0033867, intron 4 of 4) -1647 FBgn0264358 FBgn0264358 FBtr0332253 CR43810 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8888 chr3LHet 1193064 1193168 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4674 chr2R 7381231 7381324 + 17 NA intron (FBgn0001269, intron 1 of 4) protein_coding-intron (FBgn0001269, intron 2 of 5) 18067 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6906 chr3L 2223862 2224041 + 17 NA Intergenic Intergenic -5695 FBgn0035317 FBgn0035317 FBtr0332661 osm-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10967 chr3R 15561131 15561226 + 17 NA intron (FBgn0024963, intron 1 of 12) protein_coding-intron (FBgn0024963, intron 1 of 11) 4497 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5106 chr2R 10716986 10717131 + 17 NA Intergenic Intergenic -3280 FBgn0033970 FBgn0033970 FBtr0087447 CG10205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10699 chr3R 13730864 13730949 + 17 NA exon (FBgn0053547, exon 7 of 27) protein_coding-exon (FBgn0053547, exon 7 of 27) -1280 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12978 chr4 892122 892176 + 17 NA exon (FBgn0025726, exon 23 of 23) protein_coding-exon (FBgn0025726, exon 23 of 23) 3699 FBgn0263344 FBgn0263344 FBtr0308778 CR43425 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13044 chrU 40996 41050 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5897 chr2R 17678296 17678359 + 17 NA exon (FBgn0034660, exon 2 of 4) protein_coding-exon (FBgn0034660, exon 2 of 4) 833 FBgn0034660 FBgn0034660 FBtr0071745 lox2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7053 chr3L 4516302 4516366 + 17 NA intron (FBgn0014073, intron 2 of 5) protein_coding-intron (FBgn0014073, intron 2 of 5) -7901 FBgn0261526 FBgn0261526 FBtr0301520 NT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3042 chr2L 19510620 19510720 + 17 NA exon (FBgn0032797, exon 16 of 17) protein_coding-exon (FBgn0032797, exon 16 of 17) -1910 FBgn0032796 FBgn0032796 FBtr0329963 CG10188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12112 chr3R 24298378 24298733 + 17 NA exon (FBgn0039584, exon 7 of 7) protein_coding-exon (FBgn0039584, exon 7 of 7) -11724 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4003 chr2R 1596180 1596437 + 17 NA exon (FBgn0000099, exon 6 of 8) protein_coding-exon (FBgn0000099, exon 6 of 8) 6703 FBgn0259978 FBgn0259978 FBtr0307530 vlc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6407 chr2RHet 740029 740083 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11127 chr3R 16517118 16517213 + 17 NA TTS (FBgn0024944) protein_coding-TTS (FBgn0024944) 13260 FBgn0263406 FBgn0263406 FBtr0309185 CR43452 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9242 chr3R 2668955 2669009 + 17 NA intron (FBgn0003339, intron 1 of 2) protein_coding-intron (FBgn0003339, intron 1 of 2) 6721 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2217 chr2L 15300742 15300909 + 17 NA Intergenic Intergenic 3017 FBgn0028852 FBgn0028852 FBtr0080733 CG15262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13095 chrU 205999 206262 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_266 chr2L 1459295 1459429 + 17 NA Intergenic Intergenic 16636 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11296 chr3R 18105084 18105138 + 17 NA intron (FBgn0051163, intron 7 of 18) protein_coding-intron (FBgn0051163, intron 7 of 18) -13537 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4509 chr2R 6058883 6059194 + 17 NA intron (FBgn0033494, intron 1 of 16) protein_coding-intron (FBgn0033494, intron 1 of 16) -12949 FBgn0033495 FBgn0033495 FBtr0088370 CG12214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12362 chr3R 25396671 25396725 + 17 NA Intergenic Intergenic 14589 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10818 chr3R 14455819 14456103 + 17 NA intron (FBgn0038632, intron 2 of 3) protein_coding-intron (FBgn0038632, intron 2 of 3) -1701 FBgn0051228 FBgn0051228 FBtr0083693 tRNA:CR31228 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1914 chr2L 14292838 14292927 + 17 NA TTS (FBgn0263649) ncRNA-TTS (FBgn0263649) 1681 FBgn0263648 FBgn0263648 FBtr0310012 CR43639 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1224 chr2L 8837198 8837475 + 17 NA Intergenic Intergenic 11711 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3753 chr2L 22569080 22569134 + 17 NA intron (FBgn0058006, intron 6 of 9) protein_coding-intron (FBgn0058006, intron 6 of 9) 75420 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10089 chr3R 9418136 9418356 + 17 NA promoter-TSS (FBgn0038159) protein_coding-promoter-TSS (FBgn0038159) 90 FBgn0038159 FBgn0038159 FBtr0082789 CG14369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12817 chr3R 27849764 27849916 + 17 NA Intergenic Intergenic -14255 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11918 chr3R 23560400 23560509 + 17 NA Intergenic Intergenic -1808 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13383 chrUextra 18485303 18485386 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9125 chr3R 1899984 1900038 + 17 NA Intergenic Intergenic 3994 FBgn0037399 FBgn0037399 FBtr0078620 Or83c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5610 chr2R 15481875 15481997 + 17 NA exon (FBgn0034459, exon 1 of 5) protein_coding-exon (FBgn0034459, exon 1 of 5) 641 FBgn0034459 FBgn0034459 FBtr0300829 CG16716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1908 chr2L 14279425 14279607 + 17 NA intron (FBgn0261563, intron 2 of 12) protein_coding-intron (FBgn0261563, intron 2 of 15) 4721 FBgn0052971 FBgn0052971 FBtr0080621 CG32971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_158 chr2L 1045662 1045987 + 17 NA intron (FBgn0031294, intron 2 of 11) protein_coding-intron (FBgn0031294, intron 2 of 11) 8578 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3425 chr2L 21652237 21652654 + 17 NA Intergenic Intergenic -5111 FBgn0262620 FBgn0262620 FBtr0305481 CG43144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2395 chr2L 16037319 16037425 + 17 NA exon (FBgn0028644, exon 7 of 8) protein_coding-exon (FBgn0028644, exon 7 of 8) -7180 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13766 chrX 16110903 16111168 + 17 NA promoter-TSS (FBgn0000459) protein_coding-promoter-TSS (FBgn0000459) -256 FBgn0000459 FBgn0000459 FBtr0100384 disco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6483 chr2RHet 1551720 1551823 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6536 chr2RHet 1904491 1904952 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13501 chrX 3056343 3056403 + 17 NA intron (FBgn0004647, intron 5 of 8) protein_coding-intron (FBgn0004647, intron 5 of 8) 10800 FBgn0028746 FBgn0028746 FBtr0070543 CG18508 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8990 chr3R 712285 712363 + 17 NA Intergenic Intergenic -8069 FBgn0020280 FBgn0020280 FBtr0078852 laf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3628 chr2L 22154849 22155383 + 17 NA exon (FBgn0261802, exon 6 of 8) protein_coding-exon (FBgn0261802, exon 6 of 8) 3362 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9605 chr3R 5372800 5373005 + 17 NA TTS (FBgn0260722) ncRNA-TTS (FBgn0260722) 4158 FBgn0037705 FBgn0037705 FBtr0082118 mura protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7882 chr3L 13207173 13207260 + 17 NA promoter-TSS (FBgn0052127) tRNA-promoter-TSS (FBgn0052127) 7 FBgn0052127 FBgn0052127 FBtr0075831 tRNA:CR32127 tRNA Nup98-S2-pascual-garcia2017_R1_peak_6812 chr3L 1231545 1231709 + 17 NA exon (FBgn0264272, exon 7 of 7) protein_coding-exon (FBgn0264272, exon 7 of 7) -1277 FBgn0053965 FBgn0053965 FBtr0100006 CG33965 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2204 chr2L 15233399 15233453 + 17 NA intron (FBgn0028516, intron 4 of 6) protein_coding-intron (FBgn0028516, intron 6 of 8) 12492 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13658 chrX 11387102 11387156 + 17 NA promoter-TSS (FBgn0052666) protein_coding-promoter-TSS (FBgn0052666) -74 FBgn0052666 FBgn0052666 FBtr0301021 Drak protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5558 chr2R 14908350 14908404 + 17 NA Intergenic Intergenic -9137 FBgn0263083 FBgn0263083 FBtr0307099 CG43351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2743 chr2L 17781865 17781929 + 17 NA Intergenic Intergenic -10515 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8734 chr3L 23446841 23446895 + 17 NA Intergenic Intergenic -102157 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_580 chr2L 4098289 4098760 + 17 NA exon (FBgn0000547, exon 6 of 9) protein_coding-exon (FBgn0000547, exon 6 of 9) 12634 FBgn0086032 FBgn0086032 FBtr0114308 snoRNA:Me28S-C437 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_991 chr2L 7361768 7361920 + 17 NA Intergenic Intergenic -2976 FBgn0031903 FBgn0031903 FBtr0303207 Wnt10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13690 chrX 12837719 12837773 + 17 NA exon (FBgn0086675, exon 5 of 6) protein_coding-exon (FBgn0086675, exon 5 of 6) 5196 FBgn0086675 FBgn0086675 FBtr0333319 fne protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11526 chr3R 21807345 21807399 + 17 NA TTS (FBgn0259146) protein_coding-TTS (FBgn0259146) -1363 FBgn0015269 FBgn0015269 FBtr0084952 Nf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13096 chrU 206653 206880 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6102 chr2R 19515531 19515621 + 17 NA Intergenic Intergenic -4559 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11345 chr3R 18925618 18925672 + 17 NA TTS (FBgn0039052) protein_coding-TTS (FBgn0039052) 387 FBgn0039053 FBgn0039053 FBtr0084353 CG6738 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9384 chr3R 3659579 3659687 + 17 NA intron (FBgn0085413, intron 1 of 10) protein_coding-intron (FBgn0085413, intron 2 of 11) 19550 FBgn0085413 FBgn0085413 FBtr0302036 CG34384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12249 chr3R 24827475 24827598 + 17 NA intron (FBgn0039620, intron 1 of 9) protein_coding-intron (FBgn0039620, intron 1 of 9) 7018 FBgn0263579 FBgn0263579 FBtr0309743 mir-4947 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2390 chr2L 16032028 16032190 + 17 NA intron (FBgn0028644, intron 2 of 7) protein_coding-intron (FBgn0028644, intron 2 of 7) -12443 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9130 chr3R 1961034 1961122 + 17 NA Intergenic Intergenic -7401 FBgn0263498 FBgn0263498 FBtr0309514 CR43487 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_470 chr2L 3124901 3124955 + 17 NA exon (FBgn0015600, exon 3 of 11) protein_coding-exon (FBgn0015600, exon 3 of 11) -3792 FBgn0031504 FBgn0031504 FBtr0077661 CG15403 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_738 chr2L 5331790 5331973 + 17 NA exon (FBgn0031702, exon 2 of 5) protein_coding-exon (FBgn0031702, exon 2 of 5) 2024 FBgn0031701 FBgn0031701 FBtr0307036 TotM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11851 chr3R 23263185 23263239 + 17 NA promoter-TSS (FBgn0016061) protein_coding-promoter-TSS (FBgn0016061) -8 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5642 chr2R 15677572 15677708 + 17 NA Intergenic Intergenic -6115 FBgn0034474 FBgn0034474 FBtr0086343 Obp56g protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12358 chr3R 25386642 25386696 + 17 NA intron (FBgn0000492, intron 1 of 1) protein_coding-intron (FBgn0000492, intron 1 of 1) 4560 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11302 chr3R 18119286 18119472 + 17 NA TTS (FBgn0262382) pre_miRNA-TTS (FBgn0262382) 731 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7582 chr3L 10616347 10616475 + 17 NA exon (FBgn0260396, exon 2 of 2) protein_coding-exon (FBgn0260396, exon 2 of 2) 265 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8811 chr3L 24047877 24047936 + 17 NA Intergenic Intergenic -19423 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1862 chr2L 13992977 13993121 + 17 NA exon (FBgn0003255, exon 2 of 15) protein_coding-exon (FBgn0003255, exon 2 of 15) -2330 FBgn0003255 FBgn0003255 FBtr0301918 rk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10703 chr3R 13747702 13747809 + 17 NA intron (FBgn0263995, intron 1 of 10) protein_coding-intron (FBgn0263995, intron 1 of 11) -5455 FBgn0053547 FBgn0053547 FBtr0305019 Rim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10558 chr3R 12751450 12751630 + 17 NA Intergenic Intergenic -2585 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7229 chr3L 6794590 6794644 + 17 NA Intergenic Intergenic 11359 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6220 chr2R 20476411 20476521 + 17 NA intron (FBgn0020521, intron 2 of 7) protein_coding-intron (FBgn0020521, intron 3 of 8) 7680 FBgn0020521 FBgn0020521 FBtr0301502 pio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_315 chr2L 1607542 1607619 + 17 NA exon (FBgn0261509, exon 11 of 11) protein_coding-exon (FBgn0261509, exon 11 of 11) 3545 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6553 chr2RHet 1924577 1924640 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2602 chr2L 17094195 17094359 + 17 NA Intergenic Intergenic 6636 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3180 chr2L 20271614 20271797 + 17 NA Intergenic Intergenic -7406 FBgn0260000 FBgn0260000 FBtr0081375 CG17570 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4174 chr2R 3441415 3441476 + 17 NA intron (FBgn0033192, intron 1 of 13) protein_coding-intron (FBgn0033192, intron 1 of 13) 8278 FBgn0033192 FBgn0033192 FBtr0088909 Corin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8011 chr3L 14121903 14122046 + 17 NA intron (FBgn0042630, intron 1 of 6) protein_coding-intron (FBgn0042630, intron 1 of 6) 2423 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_403 chr2L 2530189 2530621 + 17 NA Intergenic Intergenic -12368 FBgn0031430 FBgn0031430 FBtr0077781 CG3528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2583 chr2L 17038193 17038261 + 17 NA Intergenic Intergenic 4938 FBgn0264346 FBgn0264346 FBtr0332013 CR43802 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6234 chr2R 20581974 20582255 + 17 NA promoter-TSS (FBgn0035050) protein_coding-promoter-TSS (FBgn0035050) -205 FBgn0035050 FBgn0035050 FBtr0072442 ST6Gal protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7896 chr3L 13317522 13317923 + 17 NA Intergenic Intergenic -4513 FBgn0040814 FBgn0040814 FBtr0075837 CG14113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1127 chr2L 8620005 8620111 + 17 NA promoter-TSS (FBgn0051602) tRNA-promoter-TSS (FBgn0051602) 30 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_225 chr2L 1366851 1366974 + 17 NA Intergenic Intergenic -1177 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13317 chrUextra 505180 505526 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8199 chr3L 16015169 16015528 + 17 NA promoter-TSS (FBgn0264600) protein_coding-promoter-TSS (FBgn0264600) -742 FBgn0264600 FBgn0264600 FBtr0333620 CG43949 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7362 chr3L 8038281 8038372 + 17 NA intron (FBgn0011817, intron 4 of 8) protein_coding-intron (FBgn0011817, intron 4 of 9) 11149 FBgn0026263 FBgn0026263 FBtr0302329 bip1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10208 chr3R 10390248 10390420 + 17 NA exon (FBgn0038241, exon 1 of 1) protein_coding-exon (FBgn0038241, exon 1 of 1) 170 FBgn0038241 FBgn0038241 FBtr0082983 CG8087 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10055 chr3R 9166402 9166546 + 17 NA exon (FBgn0038140, exon 2 of 6) protein_coding-exon (FBgn0038140, exon 2 of 6) 789 FBgn0038140 FBgn0038140 FBtr0082745 CG8784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3148 chr2L 20052721 20052853 + 17 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 8188 FBgn0014127 FBgn0014127 FBtr0081349 barr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6009 chr2R 18747770 18747957 + 17 NA Intergenic Intergenic -1546 FBgn0001263 FBgn0001263 FBtr0305132 inaD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2761 chr2L 17807536 17807944 + 17 NA intron (FBgn0262018, intron 6 of 14) protein_coding-intron (FBgn0262018, intron 5 of 13) 4932 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3562 chr2L 22003348 22003493 + 17 NA Intergenic Intergenic -10487 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3922 chr2R 468687 468741 + 17 NA Intergenic Intergenic -14084 FBgn0260799 FBgn0260799 FBtr0111114 p120ctn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3899 chr2R 139251 139646 + 17 NA Intergenic Intergenic -9004 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10062 chr3R 9242675 9242808 + 17 NA Intergenic Intergenic -1735 FBgn0041711 FBgn0041711 FBtr0082757 yellow-e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4466 chr2R 5659898 5660060 + 17 NA intron (FBgn0027589, intron 6 of 8) protein_coding-intron (FBgn0027589, intron 6 of 8) -14406 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10036 chr3R 9025876 9026047 + 17 NA Intergenic Intergenic 8538 FBgn0038125 FBgn0038125 FBtr0082734 CG8141 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8130 chr3L 15330735 15330789 + 17 NA exon (FBgn0036494, exon 1 of 1) protein_coding-exon (FBgn0036494, exon 1 of 1) 970 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5148 chr2R 11069242 11069296 + 17 NA intron (FBgn0013467, intron 4 of 4) protein_coding-intron (FBgn0013467, intron 2 of 2) -3394 FBgn0262478 FBgn0262478 FBtr0304816 CG43068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7510 chr3L 9791566 9791641 + 17 NA promoter-TSS (FBgn0044051) protein_coding-promoter-TSS (FBgn0044051) 69 FBgn0044051 FBgn0044051 FBtr0076328 Ilp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5147 chr2R 11058260 11058314 + 17 NA intron (FBgn0013467, intron 1 of 2) protein_coding-intron (FBgn0013467, intron 1 of 2) -11237 FBgn0264379 FBgn0264379 FBtr0332269 CR43831 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8941 chr3R 46677 46742 + 17 NA promoter-TSS (FBgn0037218) protein_coding-promoter-TSS (FBgn0037218) -10 FBgn0037218 FBgn0037218 FBtr0078966 aux protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7081 chr3L 5326503 5326686 + 17 NA Intergenic Intergenic -8590 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_12092 chr3R 24228530 24228749 + 17 NA Intergenic Intergenic -15291 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1665 chr2L 12605867 12605921 + 17 NA intron (FBgn0085424, intron 2 of 5) protein_coding-intron (FBgn0085424, intron 2 of 5) -12454 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10655 chr3R 13472081 13472179 + 17 NA promoter-TSS (FBgn0051579) tRNA-promoter-TSS (FBgn0051579) 40 FBgn0051579 FBgn0051579 FBtr0083474 tRNA:CR31579 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10414 chr3R 11935491 11935651 + 17 NA Intergenic Intergenic 10633 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2 chr2L 12833 12899 + 17 NA exon (FBgn0002121, exon 6 of 9) protein_coding-exon (FBgn0002121, exon 6 of 9) 5337 FBgn0031208 FBgn0031208 FBtr0330654 CG11023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3008 chr2L 19299295 19299418 + 17 NA promoter-TSS (FBgn0032769) protein_coding-promoter-TSS (FBgn0032769) 495 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9469 chr3R 4309496 4309616 + 17 NA Intergenic Intergenic -6241 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3252 chr2L 20576133 20576192 + 17 NA Intergenic Intergenic 13738 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11629 chr3R 22247414 22247468 + 17 NA Intergenic Intergenic 3374 FBgn0040606 FBgn0040606 FBtr0309031 CG6503 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9894 chr3R 7987441 7987524 + 17 NA Intergenic Intergenic -3165 FBgn0037993 FBgn0037993 FBtr0082549 dpr15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4163 chr2R 3321384 3321587 + 17 NA exon (FBgn0003460, exon 7 of 7) protein_coding-exon (FBgn0003460, exon 7 of 7) -5387 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3950 chr2R 833033 833929 + 17 NA Intergenic Intergenic -3691 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5304 chr2R 12453066 12453120 + 17 NA promoter-TSS (FBgn0034137) protein_coding-promoter-TSS (FBgn0034137) -330 FBgn0034136 FBgn0034136 FBtr0330002 DAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4400 chr2R 5201314 5201498 + 17 NA promoter-TSS (FBgn0262220) pre_miRNA-promoter-TSS (FBgn0262220) -799 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2135 chr2L 14963252 14963401 + 17 NA exon (FBgn0259213, exon 2 of 20) protein_coding-exon (FBgn0259213, exon 2 of 20) 8974 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6767 chr3L 868444 868635 + 17 NA intron (FBgn0035171, intron 3 of 6) protein_coding-intron (FBgn0035171, intron 3 of 6) 3143 FBgn0035171 FBgn0035171 FBtr0304699 CG12502 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6800 chr3L 1139748 1139816 + 17 NA TTS (FBgn0025525) protein_coding-TTS (FBgn0025525) 37494 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3370 chr2L 21285549 21285603 + 17 NA TTS (FBgn0032940) protein_coding-TTS (FBgn0032940) -1303 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10070 chr3R 9281741 9281963 + 17 NA exon (FBgn0038156, exon 3 of 17) protein_coding-exon (FBgn0038156, exon 3 of 17) 5540 FBgn0038156 FBgn0038156 FBtr0309090 CG14372 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7521 chr3L 9978284 9978338 + 17 NA intron (FBgn0040823, intron 1 of 6) protein_coding-intron (FBgn0040823, intron 1 of 5) 10560 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4667 chr2R 7356754 7356813 + 17 NA Intergenic Intergenic -6427 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11698 chr3R 22526160 22526558 + 17 NA exon (FBgn0023179, exon 8 of 12) protein_coding-exon (FBgn0023179, exon 8 of 12) -7114 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5291 chr2R 12380367 12380421 + 17 NA exon (FBgn0034132, exon 2 of 2) protein_coding-exon (FBgn0034132, exon 2 of 2) 1789 FBgn0034132 FBgn0034132 FBtr0087087 S-Lap8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7170 chr3L 6258288 6258423 + 17 NA Intergenic Intergenic -4095 FBgn0001258 FBgn0001258 FBtr0332066 ImpL3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10861 chr3R 14798486 14798860 + 17 NA intron (FBgn0263983, intron 12 of 14) protein_coding-intron (FBgn0261262, intron 16 of 18) 5858 FBgn0038665 FBgn0038665 FBtr0304691 CG12269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_194 chr2L 1256974 1257084 + 17 NA intron (FBgn0041097, intron 1 of 11) protein_coding-intron (FBgn0041097, intron 1 of 11) 603 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8522 chr3L 18660404 18660461 + 17 NA promoter-TSS (FBgn0260027) protein_coding-promoter-TSS (FBgn0260027) -29 FBgn0260027 FBgn0260027 FBtr0300582 CG42495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7228 chr3L 6785764 6785990 + 17 NA exon (FBgn0086680, exon 1 of 1) protein_coding-exon (FBgn0086680, exon 1 of 1) 2619 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1831 chr2L 13736417 13736589 + 17 NA exon (FBgn0051813, exon 1 of 1) protein_coding-exon (FBgn0051813, exon 1 of 1) 363 FBgn0051813 FBgn0051813 FBtr0080531 CG31813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3700 chr2L 22347896 22347950 + 17 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -6432 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4691 chr2R 7463228 7463427 + 17 NA Intergenic Intergenic 12509 FBgn0082993 FBgn0082993 FBtr0113499 snoRNA:Psi28S-1936 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3032 chr2L 19461542 19461682 + 17 NA Intergenic Intergenic -2655 FBgn0000964 FBgn0000964 FBtr0329891 tj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3524 chr2L 21946921 21947133 + 17 NA Intergenic Intergenic 30666 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7799 chr3L 12584944 12585237 + 17 NA intron (FBgn0015904, intron 3 of 4) protein_coding-intron (FBgn0015904, intron 3 of 4) 11318 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11361 chr3R 19100727 19100936 + 17 NA intron (FBgn0004882, intron 2 of 9) protein_coding-intron (FBgn0004882, intron 2 of 9) -4799 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_767 chr2L 5484336 5484515 + 17 NA Intergenic Intergenic 22784 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13055 chrU 71726 71935 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2697 chr2L 17577373 17577428 + 17 NA Intergenic Intergenic 2726 FBgn0262400 FBgn0262400 FBtr0304303 mir-287 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4948 chr2R 9405899 9406106 + 17 NA exon (FBgn0260964, exon 7 of 7) protein_coding-exon (FBgn0260964, exon 7 of 7) 3238 FBgn0033848 FBgn0033848 FBtr0087671 CG13330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9109 chr3R 1803510 1803711 + 17 NA Intergenic Intergenic -1071 FBgn0010403 FBgn0010403 FBtr0078655 Os-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2166 chr2L 15102572 15102661 + 17 NA Intergenic Intergenic -6789 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1011 chr2L 7760453 7760507 + 17 NA intron (FBgn0031944, intron 2 of 7) protein_coding-intron (FBgn0031944, intron 2 of 7) -3821 FBgn0031944 FBgn0031944 FBtr0079483 CG7196 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1591 chr2L 11873111 11873173 + 17 NA intron (FBgn0259225, intron 1 of 8) protein_coding-intron (FBgn0259225, intron 3 of 9) 19712 FBgn0261805 FBgn0261805 FBtr0303281 CG42751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3835 chr2L 22892788 22892987 + 17 NA exon (FBgn0250907, exon 9 of 9) protein_coding-exon (FBgn0250907, exon 9 of 9) 18353 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8016 chr3L 14150407 14150479 + 17 NA Intergenic Intergenic 21277 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6720 chr3L 457781 457906 + 17 NA intron (FBgn0001316, intron 2 of 14) protein_coding-intron (FBgn0001316, intron 6 of 18) -9711 FBgn0001316 FBgn0001316 FBtr0112808 klar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10460 chr3R 12228669 12228909 + 17 NA intron (FBgn0003513, intron 1 of 8) protein_coding-intron (FBgn0003513, intron 1 of 7) 623 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10697 chr3R 13723721 13723922 + 17 NA intron (FBgn0053547, intron 7 of 24) protein_coding-intron (FBgn0053547, intron 8 of 26) -8365 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7566 chr3L 10590038 10590135 + 17 NA Intergenic Intergenic 26590 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9981 chr3R 8642732 8642786 + 17 NA promoter-TSS (FBgn0051345) protein_coding-promoter-TSS (FBgn0051345) -8 FBgn0051345 FBgn0051345 FBtr0082689 CG31345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1344 chr2L 9449756 9449948 + 17 NA promoter-TSS (FBgn0002973) protein_coding-promoter-TSS (FBgn0002973) 22 FBgn0002973 FBgn0002973 FBtr0079822 numb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6547 chr2RHet 1919514 1919609 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6761 chr3L 729117 729177 + 17 NA Intergenic Intergenic 8332 FBgn0264310 FBgn0264310 FBtr0331773 CR43785 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5101 chr2R 10687173 10687227 + 17 NA promoter-TSS (FBgn0001319) protein_coding-promoter-TSS (FBgn0001319) -2668 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11005 chr3R 15773196 15773267 + 17 NA promoter-TSS (FBgn0038756) protein_coding-promoter-TSS (FBgn0038756) -961 FBgn0038756 FBgn0038756 FBtr0083823 CG4783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3981 chr2R 1020151 1020410 + 17 NA Intergenic Intergenic 4308 FBgn0262901 FBgn0262901 FBtr0306315 CR43256 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_57 chr2L 718192 718378 + 17 NA Intergenic Intergenic -3317 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12562 chr3R 26684541 26684678 + 17 NA Intergenic Intergenic 6572 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13017 chr4 1036114 1036187 + 17 NA exon (FBgn0025741, exon 5 of 10) protein_coding-exon (FBgn0025741, exon 5 of 10) 11570 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3873 chr2LHet 192495 192893 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4749 chr2R 7800273 7800458 + 17 NA promoter-TSS (FBgn0033667) protein_coding-promoter-TSS (FBgn0033667) -85 FBgn0033667 FBgn0033667 FBtr0088054 CG13183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6030 chr2R 18902030 18902195 + 17 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) -15706 FBgn0034808 FBgn0034808 FBtr0071988 CG9896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5787 chr2R 16870439 16870554 + 17 NA TTS (FBgn0034567) protein_coding-TTS (FBgn0034567) 3504 FBgn0034567 FBgn0034567 FBtr0071553 CG15651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6110 chr2R 19538169 19538223 + 17 NA intron (FBgn0004795, intron 6 of 11) protein_coding-intron (FBgn0004795, intron 6 of 11) -6898 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7400 chr3L 8381049 8381103 + 17 NA exon (FBgn0001253, exon 5 of 7) protein_coding-exon (FBgn0001253, exon 5 of 7) -3564 FBgn0035886 FBgn0035886 FBtr0076608 Jon66Ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3532 chr2L 21955023 21955336 + 17 NA Intergenic Intergenic 37754 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4433 chr2R 5414999 5415188 + 17 NA exon (FBgn0259246, exon 10 of 22) protein_coding-exon (FBgn0259246, exon 10 of 22) 20547 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2224 chr2L 15339538 15339862 + 17 NA Intergenic Intergenic 5836 FBgn0001981 FBgn0001981 FBtr0080734 esg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8723 chr3L 23310705 23310909 + 17 NA TTS (FBgn0010215) protein_coding-TTS (FBgn0010215) 20393 FBgn0010215 FBgn0010215 FBtr0070038 alpha-Cat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8686 chr3L 22272551 22272605 + 17 NA exon (FBgn0025702, exon 4 of 9) protein_coding-exon (FBgn0025702, exon 4 of 9) 2114 FBgn0025702 FBgn0025702 FBtr0306597 srpk79D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3957 chr2R 841793 842010 + 17 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 4729 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1134 chr2L 8628525 8628608 + 17 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 8538 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7936 chr3L 13610788 13610961 + 17 NA intron (FBgn0264001, intron 3 of 10) protein_coding-intron (FBgn0264001, intron 4 of 12) -3063 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5576 chr2R 15066212 15066266 + 17 NA promoter-TSS (FBgn0263395) protein_coding-promoter-TSS (FBgn0263395) -20 FBgn0263395 FBgn0263395 FBtr0086504 hppy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_928 chr2L 6833801 6834035 + 17 NA intron (FBgn0051632, intron 4 of 4) protein_coding-intron (FBgn0051632, intron 4 of 4) 11601 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12117 chr3R 24314274 24314412 + 17 NA intron (FBgn0013813, intron 2 of 46) protein_coding-intron (FBgn0013813, intron 2 of 46) 1668 FBgn0013813 FBgn0013813 FBtr0301303 Dhc98D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3445 chr2L 21741565 21741736 + 17 NA exon (FBgn0086779, exon 9 of 9) protein_coding-exon (FBgn0086779, exon 9 of 9) 15816 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11171 chr3R 16873655 16873713 + 17 NA promoter-TSS (FBgn0051207) protein_coding-promoter-TSS (FBgn0051207) 859 FBgn0038849 FBgn0038849 FBtr0084043 CG7079 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5702 chr2R 16096766 16096826 + 17 NA Intergenic Intergenic 3328 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8658 chr3L 21701410 21701596 + 17 NA Intergenic Intergenic -2038 FBgn0052447 FBgn0052447 FBtr0078461 CG32447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3577 chr2L 22026519 22026679 + 17 NA Intergenic Intergenic 6564 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3291 chr2L 20768988 20769183 + 17 NA Intergenic Intergenic -1809 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2309 chr2L 15605636 15605716 + 17 NA Intergenic Intergenic 6293 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9956 chr3R 8467736 8467813 + 17 NA exon (FBgn0038070, exon 1 of 3) protein_coding-exon (FBgn0038070, exon 1 of 3) 521 FBgn0038070 FBgn0038070 FBtr0301150 CG6753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7739 chr3L 12172956 12173010 + 17 NA promoter-TSS (FBgn0027843) protein_coding-promoter-TSS (FBgn0027843) 2282 FBgn0027843 FBgn0027843 FBtr0076001 CAH2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8804 chr3L 23951451 23951514 + 17 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 28028 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12043 chr3R 24042274 24042483 + 17 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 46966 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7994 chr3L 13984530 13984591 + 17 NA intron (FBgn0036391, intron 1 of 7) protein_coding-intron (FBgn0036391, intron 1 of 5) 1940 FBgn0036391 FBgn0036391 FBtr0333026 CG17364 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10806 chr3R 14417591 14417662 + 17 NA TTS (FBgn0038629) protein_coding-TTS (FBgn0038629) 877 FBgn0263974 FBgn0263974 FBtr0329922 qin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8484 chr3L 18155691 18155745 + 17 NA promoter-TSS (FBgn0036781) protein_coding-promoter-TSS (FBgn0036781) -96 FBgn0036781 FBgn0036781 FBtr0075134 CG13699 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4033 chr2R 2038750 2038982 + 17 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) 1315 FBgn0011938 FBgn0011938 FBtr0086016 tRNA:N5:42Ah tRNA Nup98-S2-pascual-garcia2017_R1_peak_709 chr2L 4911729 4911796 + 17 NA exon (FBgn0041150, exon 4 of 11) protein_coding-exon (FBgn0041150, exon 4 of 11) 3734 FBgn0041150 FBgn0041150 FBtr0310622 hoe1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12965 chr4 740942 741190 + 17 NA exon (FBgn0005558, exon 8 of 8) protein_coding-exon (FBgn0005558, exon 8 of 8) -3964 FBgn0005666 FBgn0005666 FBtr0301341 bt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_124 chr2L 947670 947793 + 17 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 24938 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4536 chr2R 6223753 6223899 + 17 NA intron (FBgn0261698, intron 12 of 27) protein_coding-intron (FBgn0261698, intron 12 of 28) -15821 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11009 chr3R 15786775 15787017 + 17 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) -12339 FBgn0051213 FBgn0051213 FBtr0083824 CG31213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8944 chr3R 106867 106943 + 17 NA promoter-TSS (FBgn0041605) protein_coding-promoter-TSS (FBgn0041605) -3390 FBgn0037229 FBgn0037229 FBtr0078980 CG9766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8147 chr3L 15449996 15450133 + 17 NA Intergenic Intergenic 17146 FBgn0036496 FBgn0036496 FBtr0332815 CG7804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_551 chr2L 3754916 3755207 + 17 NA TTS (FBgn0031568) protein_coding-TTS (FBgn0031568) -2195 FBgn0263846 FBgn0263846 FBtr0321309 CG43707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4267 chr2R 4304797 4304962 + 17 NA exon (FBgn0262988, exon 2 of 2) protein_coding-exon (FBgn0262988, exon 2 of 2) 332 FBgn0262988 FBgn0262988 FBtr0306826 CG43296 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9988 chr3R 8688123 8688177 + 17 NA Intergenic Intergenic -3211 FBgn0038088 FBgn0038088 FBtr0082686 CG10126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_676 chr2L 4671875 4672062 + 17 NA Intergenic Intergenic -10709 FBgn0031620 FBgn0031620 FBtr0077377 CG11929 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_642 chr2L 4433132 4433380 + 17 NA promoter-TSS (FBgn0085206) protein_coding-promoter-TSS (FBgn0085206) -652 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2240 chr2L 15405545 15405747 + 17 NA Intergenic Intergenic 19939 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9183 chr3R 2334135 2334411 + 17 NA Intergenic Intergenic -12440 FBgn0011919 FBgn0011919 FBtr0081706 tRNA:M2:83F tRNA Nup98-S2-pascual-garcia2017_R1_peak_11550 chr3R 21913031 21913214 + 17 NA intron (FBgn0039411, intron 3 of 10) protein_coding-intron (FBgn0039411, intron 3 of 10) 11311 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8934 chr3LHet 2493881 2493935 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12277 chr3R 25006792 25006846 + 17 NA intron (FBgn0039647, intron 2 of 7) protein_coding-intron (FBgn0039647, intron 2 of 6) 13896 FBgn0039647 FBgn0039647 FBtr0113304 CG14509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12666 chr3R 27060144 27060299 + 17 NA intron (FBgn0039833, intron 1 of 5) protein_coding-intron (FBgn0039833, intron 1 of 5) 782 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10584 chr3R 12964093 12964147 + 17 NA promoter-TSS (FBgn0038486) protein_coding-promoter-TSS (FBgn0038486) 489 FBgn0038485 FBgn0038485 FBtr0083406 CG5255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6213 chr2R 20394682 20394856 + 17 NA exon (FBgn0035014, exon 1 of 1) protein_coding-exon (FBgn0035014, exon 1 of 1) 371 FBgn0035014 FBgn0035014 FBtr0072300 CG13581 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5872 chr2R 17467415 17467810 + 17 NA Intergenic Intergenic -3385 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3526 chr2L 21949940 21950237 + 17 NA Intergenic Intergenic 33727 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9257 chr3R 2738871 2738997 + 17 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) -8530 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2397 chr2L 16044117 16044171 + 17 NA promoter-TSS (FBgn0000182) protein_coding-promoter-TSS (FBgn0000182) -408 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9640 chr3R 5879709 5879763 + 17 NA exon (FBgn0051410, exon 3 of 3) protein_coding-exon (FBgn0051410, exon 3 of 3) 616 FBgn0051410 FBgn0051410 FBtr0273369 Npc2e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9781 chr3R 6932711 6932812 + 17 NA Intergenic Intergenic 8667 FBgn0037860 FBgn0037860 FBtr0082380 CG6629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1051 chr2L 8118946 8119007 + 17 NA exon (FBgn0031985, exon 10 of 13) protein_coding-exon (FBgn0031985, exon 10 of 13) 5025 FBgn0031985 FBgn0031985 FBtr0301229 mon2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11459 chr3R 21182546 21182617 + 17 NA exon (FBgn0004509, exon 7 of 12) protein_coding-exon (FBgn0004509, exon 7 of 12) -1426 FBgn0039331 FBgn0039331 FBtr0273265 CG11913 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8562 chr3L 19510858 19511178 + 17 NA exon (FBgn0036878, exon 1 of 1) protein_coding-exon (FBgn0036878, exon 1 of 1) 414 FBgn0036878 FBgn0036878 FBtr0074977 Cpr76Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6482 chr2RHet 1551454 1551535 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5921 chr2R 17904338 17904641 + 17 NA intron (FBgn0085399, intron 2 of 8) protein_coding-intron (FBgn0085399, intron 2 of 8) -17860 FBgn0034681 FBgn0034681 FBtr0071749 CG9308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12652 chr3R 27000306 27000428 + 17 NA Intergenic Intergenic -5542 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2278 chr2L 15518827 15518881 + 17 NA Intergenic Intergenic -3584 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2929 chr2L 18746559 18746676 + 17 NA Intergenic Intergenic 6259 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10078 chr3R 9348635 9348799 + 17 NA TTS (FBgn0038157) protein_coding-TTS (FBgn0038157) 540 FBgn0038157 FBgn0038157 FBtr0082791 CG12538 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13796 chrX 18039441 18039495 + 17 NA Intergenic Intergenic 6809 FBgn0262874 FBgn0262874 FBtr0306281 CG43229 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_563 chr2L 3835265 3835382 + 17 NA Intergenic Intergenic -1519 FBgn0004567 FBgn0004567 FBtr0077500 slp2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5423 chr2R 13711353 13711527 + 17 NA intron (FBgn0259211, intron 1 of 13) protein_coding-intron (FBgn0259211, intron 3 of 12) 370 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1302 chr2L 9031802 9031940 + 17 NA Intergenic Intergenic -6467 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1001 chr2L 7496358 7496494 + 17 NA promoter-TSS (FBgn0260486) protein_coding-promoter-TSS (FBgn0260486) -119 FBgn0260486 FBgn0260486 FBtr0332201 CG42533 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1281 chr2L 8928620 8928681 + 17 NA exon (FBgn0085427, exon 8 of 11) protein_coding-exon (FBgn0085427, exon 8 of 11) -5413 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13223 chrU 2433518 2433979 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12996 chr4 988585 988639 + 17 NA intron (FBgn0039932, intron 2 of 4) protein_coding-intron (FBgn0039932, intron 2 of 4) 1388 FBgn0039932 FBgn0039932 FBtr0301336 CG11093 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7828 chr3L 12722554 12722889 + 17 NA Intergenic Intergenic 4990 FBgn0261933 FBgn0261933 FBtr0075952 SmD1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_634 chr2L 4418999 4419064 + 17 NA promoter-TSS (FBgn0051963) tRNA-promoter-TSS (FBgn0051963) 17 FBgn0051963 FBgn0051963 FBtr0077458 tRNA:CR31963 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9055 chr3R 1281246 1281451 + 17 NA exon (FBgn0037326, exon 8 of 8) protein_coding-exon (FBgn0037326, exon 8 of 8) 7494 FBgn0037327 FBgn0037327 FBtr0330027 PEK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12086 chr3R 24210902 24210956 + 17 NA Intergenic Intergenic 32965 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10122 chr3R 9672101 9672354 + 17 NA Intergenic Intergenic -6575 FBgn0051495 FBgn0051495 FBtr0082882 CG31495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8528 chr3L 18762065 18762123 + 17 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -3250 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2683 chr2L 17402415 17402613 + 17 NA TTS (FBgn0020503) protein_coding-TTS (FBgn0020503) 7892 FBgn0032634 FBgn0032634 FBtr0081011 Rpb11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1650 chr2L 12520447 12520598 + 17 NA intron (FBgn0259176, intron 5 of 7) protein_coding-intron (FBgn0259176, intron 5 of 7) 12414 FBgn0263458 FBgn0263458 FBtr0309757 snoRNA:CG43051-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2337 chr2L 15815364 15815465 + 17 NA Intergenic Intergenic -3273 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2303 chr2L 15585834 15586055 + 17 NA Intergenic Intergenic 26025 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1699 chr2L 12750697 12750751 + 17 NA Intergenic Intergenic 11116 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7263 chr3L 6984514 6984577 + 17 NA exon (FBgn0045759, exon 1 of 4) protein_coding-exon (FBgn0045759, exon 1 of 4) 823 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4842 chr2R 8630644 8630721 + 17 NA intron (FBgn0261545, intron 4 of 8) protein_coding-intron (FBgn0261545, intron 3 of 7) 9759 FBgn0033773 FBgn0033773 FBtr0087865 mos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5076 chr2R 10548668 10548722 + 17 NA Intergenic Intergenic -2435 FBgn0033952 FBgn0033952 FBtr0087482 Adgf-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6120 chr2R 19575696 19575762 + 17 NA promoter-TSS (FBgn0262728) protein_coding-promoter-TSS (FBgn0262728) 45 FBgn0262728 FBgn0262728 FBtr0301509 Pal2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1312 chr2L 9061237 9061308 + 17 NA intron (FBgn0051708, intron 3 of 9) protein_coding-intron (FBgn0051708, intron 3 of 9) 9890 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4867 chr2R 8787264 8787362 + 17 NA TTS (FBgn0003975) protein_coding-TTS (FBgn0003975) 15607 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1376 chr2L 9746758 9746875 + 17 NA promoter-TSS (FBgn0028704) protein_coding-promoter-TSS (FBgn0028704) -333 FBgn0028704 FBgn0028704 FBtr0079928 Nckx30C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11639 chr3R 22305777 22305842 + 17 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 14014 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2137 chr2L 14968003 14968097 + 17 NA intron (FBgn0259213, intron 1 of 19) protein_coding-intron (FBgn0259213, intron 1 of 19) 4250 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6948 chr3L 2740338 2740475 + 17 NA TTS (FBgn0020509) protein_coding-TTS (FBgn0020509) 656 FBgn0020509 FBgn0020509 FBtr0072943 Acp62F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3607 chr2L 22078295 22078537 + 17 NA Intergenic Intergenic -1256 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8722 chr3L 23303955 23304131 + 17 NA Intergenic Intergenic 27157 FBgn0010215 FBgn0010215 FBtr0070038 alpha-Cat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2065 chr2L 14731268 14731365 + 17 NA Intergenic Intergenic -1315 FBgn0261571 FBgn0261571 FBtr0302857 CG42685 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12318 chr3R 25219972 25220113 + 17 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -74706 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1664 chr2L 12605328 12605393 + 17 NA intron (FBgn0085424, intron 2 of 5) protein_coding-intron (FBgn0085424, intron 2 of 5) -12988 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12601 chr3R 26808639 26808706 + 17 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) 7056 FBgn0051008 FBgn0051008 FBtr0085748 CG31008 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8591 chr3L 20163768 20163822 + 17 NA intron (FBgn0261556, intron 3 of 14) protein_coding-intron (FBgn0261556, intron 2 of 14) 14690 FBgn0261556 FBgn0261556 FBtr0332699 CG42674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6448 chr2RHet 1293738 1293879 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11808 chr3R 23153445 23153601 + 17 NA Intergenic Intergenic 3081 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1329 chr2L 9324249 9324303 + 17 NA Intergenic Intergenic -3468 FBgn0032109 FBgn0032109 FBtr0273186 CG17005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12191 chr3R 24580194 24580295 + 17 NA Intergenic Intergenic 2457 FBgn0039597 FBgn0039597 FBtr0085314 CG9997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4485 chr2R 5796781 5796858 + 17 NA exon (FBgn0000715, exon 2 of 2) protein_coding-exon (FBgn0000715, exon 2 of 2) -1579 FBgn0033465 FBgn0033465 FBtr0308338 CG12140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11614 chr3R 22189496 22189550 + 17 NA Intergenic Intergenic 8313 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1803 chr2L 13439008 13439200 + 17 NA exon (FBgn0026760, exon 2 of 2) protein_coding-exon (FBgn0026760, exon 2 of 2) 3482 FBgn0026760 FBgn0026760 FBtr0080502 Tehao protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9756 chr3R 6772808 6772948 + 17 NA Intergenic Intergenic -3128 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11535 chr3R 21860493 21860696 + 17 NA TTS (FBgn0002632) protein_coding-TTS (FBgn0002632) 1961 FBgn0002632 FBgn0002632 FBtr0084959 m6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4970 chr2R 9587967 9588078 + 17 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) -7148 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13495 chrX 2659168 2659333 + 17 NA intron (FBgn0028369, intron 2 of 11) protein_coding-intron (FBgn0028369, intron 2 of 12) -13801 FBgn0263505 FBgn0263505 FBtr0309525 CR43494 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2801 chr2L 17963220 17963373 + 17 NA promoter-TSS (FBgn0032656) protein_coding-promoter-TSS (FBgn0032656) -118 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3311 chr2L 20858515 20858645 + 17 NA promoter-TSS (FBgn0032897) protein_coding-promoter-TSS (FBgn0032897) -109 FBgn0032897 FBgn0032897 FBtr0081427 CG9336 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12832 chr3RHet 413213 413267 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9167 chr3R 2240416 2240470 + 17 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 7864 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4771 chr2R 7941748 7941826 + 17 NA promoter-TSS (FBgn0028407) protein_coding-promoter-TSS (FBgn0028407) -806 FBgn0028407 FBgn0028407 FBtr0087980 Drep-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10589 chr3R 13018885 13018939 + 17 NA Intergenic Intergenic 26694 FBgn0051262 FBgn0051262 FBtr0302853 CG31262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10490 chr3R 12390109 12390272 + 17 NA intron (FBgn0259244, intron 9 of 12) protein_coding-intron (FBgn0259244, intron 9 of 16) -7047 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8288 chr3L 16730727 16730816 + 17 NA exon (FBgn0036659, exon 3 of 4) protein_coding-exon (FBgn0036659, exon 3 of 4) 4125 FBgn0036659 FBgn0036659 FBtr0075321 CG9701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4554 chr2R 6261640 6261905 + 17 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 5842 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_296 chr2L 1545473 1545714 + 17 NA Intergenic Intergenic -9537 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9490 chr3R 4465995 4466114 + 17 NA Intergenic Intergenic 2093 FBgn0012028 FBgn0012028 FBtr0081895 tRNA:Y1:85Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_10056 chr3R 9169307 9169504 + 17 NA exon (FBgn0038140, exon 5 of 6) protein_coding-exon (FBgn0038140, exon 5 of 6) 3720 FBgn0038140 FBgn0038140 FBtr0082745 CG8784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8665 chr3L 21834443 21834497 + 17 NA promoter-TSS (FBgn0037138) protein_coding-promoter-TSS (FBgn0037138) -172 FBgn0037138 FBgn0037138 FBtr0303031 P5CDh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11290 chr3R 18086707 18086859 + 17 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -31865 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3075 chr2L 19696165 19696313 + 17 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 4729 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8093 chr3L 14874454 14874636 + 17 NA exon (FBgn0036454, exon 19 of 19) protein_coding-exon (FBgn0036454, exon 19 of 19) 12971 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8503 chr3L 18320992 18321153 + 17 NA Intergenic Intergenic -23555 FBgn0015946 FBgn0015946 FBtr0075130 grim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11442 chr3R 20789727 20789798 + 17 NA Intergenic Intergenic 16408 FBgn0039255 FBgn0039255 FBtr0084751 CG13646 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6573 chr2RHet 1956180 1956602 + 17 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11609 chr3R 22180639 22180847 + 17 NA promoter-TSS (FBgn0053970) protein_coding-promoter-TSS (FBgn0053970) -467 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6910 chr3L 2241737 2241940 + 17 NA exon (FBgn0040507, exon 8 of 12) protein_coding-exon (FBgn0040507, exon 8 of 12) -2640 FBgn0052301 FBgn0052301 FBtr0332663 CG32301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_606 chr2L 4236277 4236415 + 16 NA Intergenic Intergenic 8704 FBgn0003941 FBgn0003941 FBtr0077470 RpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12343 chr3R 25334043 25334473 + 16 NA Intergenic Intergenic -4739 FBgn0039668 FBgn0039668 FBtr0085431 Trc8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12089 chr3R 24217676 24217782 + 16 NA Intergenic Intergenic -26201 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3246 chr2L 20562568 20562732 + 16 NA TTS (FBgn0263533) pre_miRNA-TTS (FBgn0263533) 226 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2806 chr2L 17976159 17976309 + 16 NA exon (FBgn0023096, exon 12 of 25) protein_coding-exon (FBgn0023096, exon 12 of 25) 6238 FBgn0023096 FBgn0023096 FBtr0273418 btv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7856 chr3L 13045964 13046246 + 16 NA Intergenic Intergenic 6028 FBgn0036342 FBgn0036342 FBtr0075887 CG11279 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10244 chr3R 10791121 10791343 + 16 NA Intergenic Intergenic 46830 FBgn0038279 FBgn0038279 FBtr0083004 CG3837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5413 chr2R 13658311 13658365 + 16 NA promoter-TSS (FBgn0034279) protein_coding-promoter-TSS (FBgn0034279) -927 FBgn0034279 FBgn0034279 FBtr0089557 CG18635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7520 chr3L 9970272 9970326 + 16 NA intron (FBgn0040823, intron 1 of 6) protein_coding-intron (FBgn0040823, intron 1 of 5) 2548 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1393 chr2L 9868618 9868792 + 16 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 17545 FBgn0032151 FBgn0032151 FBtr0331284 nAcRalpha-30D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1890 chr2L 14136577 14136697 + 16 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 2146 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10843 chr3R 14695821 14696004 + 16 NA Intergenic Intergenic -5518 FBgn0038654 FBgn0038654 FBtr0083695 CG14298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12607 chr3R 26823107 26823179 + 16 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) -4964 FBgn0051007 FBgn0051007 FBtr0085747 CG31007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7357 chr3L 7981570 7981798 + 16 NA intron (FBgn0011817, intron 3 of 8) protein_coding-intron (FBgn0011817, intron 3 of 9) 9538 FBgn0011817 FBgn0011817 FBtr0076759 nmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9487 chr3R 4453118 4453174 + 16 NA TTS (FBgn0261929) protein_coding-TTS (FBgn0261929) 8454 FBgn0026399 FBgn0026399 FBtr0310300 Or85e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2749 chr2L 17789315 17789454 + 16 NA exon (FBgn0262018, exon 12 of 14) protein_coding-exon (FBgn0262018, exon 12 of 14) -3028 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3392 chr2L 21374994 21375066 + 16 NA exon (FBgn0032945, exon 2 of 3) protein_coding-exon (FBgn0032945, exon 2 of 3) 3803 FBgn0032945 FBgn0032945 FBtr0081517 CG8665 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2247 chr2L 15427856 15428089 + 16 NA Intergenic Intergenic -2387 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12413 chr3R 25525789 25525986 + 16 NA Intergenic Intergenic 7574 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8178 chr3L 15838038 15838092 + 16 NA promoter-TSS (FBgn0052150) protein_coding-promoter-TSS (FBgn0052150) -1218 FBgn0052150 FBgn0052150 FBtr0306853 CG32150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7257 chr3L 6978611 6978904 + 16 NA Intergenic Intergenic -1071 FBgn0250849 FBgn0250849 FBtr0076933 CG32388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3743 chr2L 22529416 22529495 + 16 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 56973 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_417 chr2L 2645527 2645738 + 16 NA promoter-TSS (FBgn0264434) ncRNA-promoter-TSS (FBgn0264434) -398 FBgn0264434 FBgn0264434 FBtr0332511 CR43852 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10956 chr3R 15506566 15506670 + 16 NA intron (FBgn0051216, intron 1 of 6) protein_coding-intron (FBgn0051216, intron 1 of 6) -8547 FBgn0012003 FBgn0012003 FBtr0083799 tRNA:V3b:92Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_6426 chr2RHet 930299 930358 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12617 chr3R 26868764 26868971 + 16 NA exon (FBgn0010015, exon 8 of 13) protein_coding-exon (FBgn0010015, exon 8 of 13) 1960 FBgn0053920 FBgn0053920 FBtr0091924 CG33920 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9254 chr3R 2721565 2721619 + 16 NA TTS (FBgn0260642) protein_coding-TTS (FBgn0260642) 8812 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4830 chr2R 8431037 8431234 + 16 NA intron (FBgn0011592, intron 1 of 9) protein_coding-intron (FBgn0011592, intron 1 of 9) -2059 FBgn0053752 FBgn0053752 FBtr0091753 CG33752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9233 chr3R 2620469 2620621 + 16 NA intron (FBgn0000439, intron 3 of 4) protein_coding-intron (FBgn0000439, intron 3 of 4) 2987 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1508 chr2L 11202576 11202784 + 16 NA intron (FBgn0259822, intron 1 of 11) protein_coding-intron (FBgn0259822, intron 1 of 11) 3412 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12688 chr3R 27177245 27177299 + 16 NA intron (FBgn0085376, intron 3 of 7) protein_coding-intron (FBgn0085376, intron 3 of 16) -20877 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11830 chr3R 23207457 23207511 + 16 NA TTS (FBgn0016061) protein_coding-TTS (FBgn0016061) -11897 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3755 chr2L 22583136 22583241 + 16 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 61339 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2096 chr2L 14819082 14819326 + 16 NA Intergenic Intergenic 8416 FBgn0053309 FBgn0053309 FBtr0080674 CG33309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5681 chr2R 15939642 15939728 + 16 NA Intergenic Intergenic -47193 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8261 chr3L 16431637 16431691 + 16 NA intron (FBgn0261799, intron 1 of 4) protein_coding-intron (FBgn0053158, intron 3 of 5) 13394 FBgn0261799 FBgn0261799 FBtr0075409 dsx-c73A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5911 chr2R 17805388 17805554 + 16 NA intron (FBgn0085397, intron 3 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 18897 FBgn0263999 FBgn0263999 FBtr0334012 CG43742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5057 chr2R 10337744 10337798 + 16 NA intron (FBgn0261613, intron 3 of 5) protein_coding-intron (FBgn0261613, intron 3 of 5) 14367 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6061 chr2R 19063699 19063796 + 16 NA exon (FBgn0085400, exon 3 of 14) protein_coding-exon (FBgn0085400, exon 3 of 14) -8184 FBgn0034833 FBgn0034833 FBtr0071998 CG13539 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9938 chr3R 8359147 8359201 + 16 NA intron (FBgn0250910, intron 2 of 7) protein_coding-intron (FBgn0250910, intron 2 of 9) 7264 FBgn0028374 FBgn0028374 FBtr0082639 hug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4075 chr2R 2688923 2689036 + 16 NA Intergenic Intergenic -6138 FBgn0014028 FBgn0014028 FBtr0086156 SdhB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4669 chr2R 7359712 7359766 + 16 NA Intergenic Intergenic -3471 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12592 chr3R 26767004 26767163 + 16 NA Intergenic Intergenic -4259 FBgn0039811 FBgn0039811 FBtr0085751 CG15550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3218 chr2L 20484749 20484874 + 16 NA Intergenic Intergenic -2685 FBgn0262455 FBgn0262455 FBtr0304488 mir-1 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5270 chr2R 12250355 12250489 + 16 NA TTS (FBgn0034122) protein_coding-TTS (FBgn0034122) 1291 FBgn0034121 FBgn0034121 FBtr0087153 CG6262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6357 chr2RHet 513017 513215 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13208 chrU 2312551 2312645 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4095 chr2R 2824095 2824149 + 16 NA intron (FBgn0053558, intron 4 of 12) protein_coding-intron (FBgn0053558, intron 4 of 15) 7378 FBgn0066293 FBgn0066293 FBtr0086192 CheB42b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7533 chr3L 10099174 10099305 + 16 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -5258 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10719 chr3R 13873663 13873717 + 16 NA exon (FBgn0010389, exon 2 of 2) protein_coding-exon (FBgn0010389, exon 2 of 2) 1393 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7061 chr3L 4786090 4786288 + 16 NA intron (FBgn0035574, intron 6 of 9) protein_coding-intron (FBgn0035574, intron 7 of 10) 19085 FBgn0035575 FBgn0035575 FBtr0073362 CG7509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6070 chr2R 19203339 19203416 + 16 NA Intergenic Intergenic -2000 FBgn0263084 FBgn0263084 FBtr0307100 CG43352 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6660 chr2RHet 2384200 2384520 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_574 chr2L 3983241 3983298 + 16 NA intron (FBgn0051774, intron 2 of 9) protein_coding-intron (FBgn0051774, intron 2 of 8) 8444 FBgn0051774 FBgn0051774 FBtr0308126 fred protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8655 chr3L 21666416 21666470 + 16 NA exon (FBgn0037115, exon 2 of 2) protein_coding-exon (FBgn0037115, exon 2 of 2) 1204 FBgn0037115 FBgn0037115 FBtr0078429 CG11249 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12634 chr3R 26952448 26952642 + 16 NA exon (FBgn0039820, exon 2 of 2) protein_coding-exon (FBgn0039820, exon 2 of 2) 672 FBgn0039820 FBgn0039820 FBtr0085736 CG15554 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4315 chr2R 4651713 4651884 + 16 NA Intergenic Intergenic 26923 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_538 chr2L 3682660 3682813 + 16 NA intron (FBgn0085369, intron 4 of 7) protein_coding-intron (FBgn0085369, intron 4 of 7) 9852 FBgn0031558 FBgn0031558 FBtr0077550 CG16704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6770 chr3L 910076 910133 + 16 NA exon (FBgn0028999, exon 1 of 1) protein_coding-exon (FBgn0028999, exon 1 of 1) 992 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8688 chr3L 22296403 22296612 + 16 NA exon (FBgn0004449, exon 6 of 9) protein_coding-exon (FBgn0004449, exon 6 of 9) 14742 FBgn0027086 FBgn0027086 FBtr0078500 Aats-ile protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4678 chr2R 7412264 7412318 + 16 NA exon (FBgn0000577, exon 3 of 3) protein_coding-exon (FBgn0000577, exon 3 of 3) 3097 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_777 chr2L 5556678 5556771 + 16 NA exon (FBgn0004620, exon 7 of 12) protein_coding-exon (FBgn0004620, exon 7 of 12) 1650 FBgn0004620 FBgn0004620 FBtr0079106 GluRIIA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6491 chr2RHet 1681510 1681695 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3449 chr2L 21762732 21762786 + 16 NA exon (FBgn0051612, exon 4 of 4) protein_coding-exon (FBgn0051612, exon 4 of 4) 4749 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12022 chr3R 23975809 23976045 + 16 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 3325 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11078 chr3R 16180200 16180254 + 16 NA Intergenic Intergenic -5803 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1522 chr2L 11319555 11319724 + 16 NA Intergenic Intergenic 11886 FBgn0263874 FBgn0263874 FBtr0329848 CR43721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4988 chr2R 9685460 9685553 + 16 NA intron (FBgn0033869, intron 2 of 4) protein_coding-intron (FBgn0033869, intron 2 of 4) 3224 FBgn0033869 FBgn0033869 FBtr0087630 Cpr50Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6080 chr2R 19297041 19297244 + 16 NA Intergenic Intergenic -6326 FBgn0050411 FBgn0050411 FBtr0072016 CG30411 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_388 chr2L 2388546 2388641 + 16 NA Intergenic Intergenic 2096 FBgn0264081 FBgn0264081 FBtr0330686 CG43750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_772 chr2L 5500392 5500557 + 16 NA Intergenic Intergenic -17145 FBgn0031707 FBgn0031707 FBtr0329966 CG14020 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6816 chr3L 1278689 1278810 + 16 NA intron (FBgn0052333, intron 1 of 9) protein_coding-intron (FBgn0052333, intron 1 of 8) 2793 FBgn0052333 FBgn0052333 FBtr0100256 CG32333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12579 chr3R 26737030 26737097 + 16 NA Intergenic Intergenic -1547 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5777 chr2R 16797922 16798180 + 16 NA exon (FBgn0034560, exon 1 of 1) protein_coding-exon (FBgn0034560, exon 1 of 1) 842 FBgn0034560 FBgn0034560 FBtr0071517 CG9235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3649 chr2L 22199432 22199633 + 16 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 14733 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11087 chr3R 16221636 16221832 + 16 NA intron (FBgn0262869, intron 9 of 20) protein_coding-intron (FBgn0262869, intron 8 of 19) 11834 FBgn0038795 FBgn0038795 FBtr0083894 CG4335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11551 chr3R 21914836 21915060 + 16 NA intron (FBgn0039411, intron 2 of 10) protein_coding-intron (FBgn0039411, intron 2 of 10) 9485 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8548 chr3L 19096420 19096562 + 16 NA Intergenic Intergenic -3028 FBgn0036850 FBgn0036850 FBtr0075032 Gem2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8914 chr3LHet 1939032 1939137 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_899 chr2L 6578606 6578776 + 16 NA intron (FBgn0031835, intron 5 of 15) protein_coding-intron (FBgn0031835, intron 5 of 15) -12104 FBgn0031834 FBgn0031834 FBtr0079330 CG13766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5419 chr2R 13703740 13703863 + 16 NA intron (FBgn0259211, intron 1 of 12) protein_coding-intron (FBgn0259211, intron 2 of 12) -7269 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5177 chr2R 11367184 11367301 + 16 NA intron (FBgn0034021, intron 1 of 4) protein_coding-intron (FBgn0034021, intron 1 of 4) 3096 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_422 chr2L 2686735 2686827 + 16 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) 9048 FBgn0051690 FBgn0051690 FBtr0301682 CG31690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2769 chr2L 17839445 17839636 + 16 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 1 of 13) -26868 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6411 chr2RHet 790607 790690 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9602 chr3R 5301352 5301676 + 16 NA exon (FBgn0037698, exon 4 of 12) protein_coding-exon (FBgn0037698, exon 4 of 12) -16616 FBgn0037697 FBgn0037697 FBtr0082042 CG9363 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1521 chr2L 11306677 11306786 + 16 NA Intergenic Intergenic -1022 FBgn0263874 FBgn0263874 FBtr0329848 CR43721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9422 chr3R 3960176 3960496 + 16 NA Intergenic Intergenic 4992 FBgn0051583 FBgn0051583 FBtr0081814 tRNA:N5:84F tRNA Nup98-S2-pascual-garcia2017_R1_peak_8989 chr3R 710509 710563 + 16 NA Intergenic Intergenic -6281 FBgn0020280 FBgn0020280 FBtr0078852 laf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11327 chr3R 18666304 18666366 + 16 NA Intergenic Intergenic 4699 FBgn0039029 FBgn0039029 FBtr0084314 CG4704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6381 chr2RHet 601643 601709 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1865 chr2L 14001959 14002013 + 16 NA promoter-TSS (FBgn0003255) protein_coding-promoter-TSS (FBgn0003255) -6141 FBgn0261582 FBgn0261582 FBtr0302893 CG42692 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11506 chr3R 21764274 21764347 + 16 NA intron (FBgn0039396, intron 2 of 6) protein_coding-intron (FBgn0039396, intron 2 of 6) 7187 FBgn0054024 FBgn0054024 FBtr0308933 CR34024 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13107 chrU 236007 236147 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5866 chr2R 17456730 17456925 + 16 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 6713 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4683 chr2R 7419327 7419402 + 16 NA Intergenic Intergenic -3976 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12479 chr3R 25784939 25785031 + 16 NA intron (FBgn0004622, intron 2 of 9) protein_coding-intron (FBgn0004622, intron 2 of 9) 10184 FBgn0004622 FBgn0004622 FBtr0330298 Takr99D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11510 chr3R 21779281 21779576 + 16 NA intron (FBgn0039396, intron 1 of 6) protein_coding-intron (FBgn0039396, intron 1 of 6) 2564 FBgn0039396 FBgn0039396 FBtr0304043 CcapR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8284 chr3L 16667308 16667510 + 16 NA promoter-TSS (FBgn0040512) protein_coding-promoter-TSS (FBgn0040512) 345 FBgn0036652 FBgn0036652 FBtr0075316 CG13032 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_112 chr2L 918944 919031 + 16 NA Intergenic Intergenic -3806 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13765 chrX 16070331 16070385 + 16 NA Intergenic Intergenic 14966 FBgn0262283 FBgn0262283 FBtr0304409 mir-985 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6447 chr2RHet 1292968 1293027 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5773 chr2R 16772748 16772802 + 16 NA exon (FBgn0015524, exon 5 of 6) protein_coding-exon (FBgn0015524, exon 5 of 6) 5340 FBgn0034558 FBgn0034558 FBtr0304717 CG9236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12011 chr3R 23931963 23932017 + 16 NA Intergenic Intergenic -40612 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_323 chr2L 1627885 1627939 + 16 NA Intergenic Intergenic -13730 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3169 chr2L 20231289 20231360 + 16 NA Intergenic Intergenic -16899 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10911 chr3R 15241849 15242021 + 16 NA exon (FBgn0051221, exon 2 of 5) protein_coding-exon (FBgn0051221, exon 2 of 5) 3519 FBgn0051221 FBgn0051221 FBtr0330030 CG31221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12824 chr3RHet 145663 145778 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10541 chr3R 12653267 12653659 + 16 NA exon (FBgn0000014, exon 2 of 7) protein_coding-exon (FBgn0000014, exon 2 of 7) 2304 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8891 chr3LHet 1266558 1266612 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9052 chr3R 1261717 1261877 + 16 NA intron (FBgn0037326, intron 2 of 7) protein_coding-intron (FBgn0037326, intron 2 of 7) -8818 FBgn0037325 FBgn0037325 FBtr0078793 CG12147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2334 chr2L 15806446 15806500 + 16 NA Intergenic Intergenic 5668 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1986 chr2L 14442489 14442692 + 16 NA Intergenic Intergenic 8332 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9448 chr3R 4150493 4150577 + 16 NA exon (FBgn0037577, exon 3 of 3) protein_coding-exon (FBgn0037577, exon 3 of 3) 478 FBgn0037577 FBgn0037577 FBtr0081837 CG7443 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5752 chr2R 16567980 16568045 + 16 NA Intergenic Intergenic 6403 FBgn0041240 FBgn0041240 FBtr0086241 Gr57a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1583 chr2L 11816523 11816577 + 16 NA exon (FBgn0259225, exon 10 of 10) protein_coding-exon (FBgn0259225, exon 10 of 10) -2770 FBgn0032378 FBgn0032378 FBtr0080259 CycY protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12218 chr3R 24624415 24624565 + 16 NA Intergenic Intergenic -7958 FBgn0261289 FBgn0261289 FBtr0085312 CheB98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6884 chr3L 2002462 2002599 + 16 NA TTS (FBgn0262030) protein_coding-TTS (FBgn0262030) 3121 FBgn0262030 FBgn0262030 FBtr0303925 CG42841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6287 chr2R 21113973 21114081 + 16 NA promoter-TSS (FBgn0001325) protein_coding-promoter-TSS (FBgn0001325) -107 FBgn0001325 FBgn0001325 FBtr0072449 Kr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2016 chr2L 14547273 14547382 + 16 NA TTS (FBgn0250844) protein_coding-TTS (FBgn0250844) 1748 FBgn0250844 FBgn0250844 FBtr0080662 CG4218 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4603 chr2R 6733746 6733977 + 16 NA intron (FBgn0050015, intron 6 of 9) protein_coding-intron (FBgn0050015, intron 5 of 7) -7630 FBgn0027525 FBgn0027525 FBtr0088245 CG7686 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3245 chr2L 20562057 20562186 + 16 NA promoter-TSS (FBgn0263533) pre_miRNA-promoter-TSS (FBgn0263533) -303 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5511 chr2R 14455560 14455614 + 16 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 28497 FBgn0085419 FBgn0085419 FBtr0112633 Rgk2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5870 chr2R 17463638 17463997 + 16 NA promoter-TSS (FBgn0034636) protein_coding-promoter-TSS (FBgn0034636) -277 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7184 chr3L 6368229 6368283 + 16 NA Intergenic Intergenic -22766 FBgn0035699 FBgn0035699 FBtr0077007 CG13300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11476 chr3R 21653019 21653241 + 16 NA Intergenic Intergenic 2357 FBgn0011670 FBgn0011670 FBtr0084916 Mst57Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9883 chr3R 7920493 7920657 + 16 NA promoter-TSS (FBgn0051361) protein_coding-promoter-TSS (FBgn0051361) -3233 FBgn0051361 FBgn0051361 FBtr0082543 dpr17 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12195 chr3R 24597281 24597509 + 16 NA Intergenic Intergenic -13439 FBgn0039598 FBgn0039598 FBtr0085313 CG14061 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3133 chr2L 19982771 19982908 + 16 NA intron (FBgn0264443, intron 2 of 5) protein_coding-intron (FBgn0264443, intron 2 of 5) 4010 FBgn0263611 FBgn0263611 FBtr0309974 CR43620 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2026 chr2L 14577938 14578156 + 16 NA Intergenic Intergenic 10187 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12393 chr3R 25493509 25493563 + 16 NA exon (FBgn0039676, exon 2 of 6) protein_coding-exon (FBgn0039676, exon 2 of 6) 1063 FBgn0039676 FBgn0039676 FBtr0332443 ppk20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8426 chr3L 17679796 17679850 + 16 NA Intergenic Intergenic -3292 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_183 chr2L 1219991 1220045 + 16 NA exon (FBgn0259229, exon 2 of 8) protein_coding-exon (FBgn0259229, exon 2 of 8) 700 FBgn0259229 FBgn0259229 FBtr0299796 CG42329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4793 chr2R 8093820 8093949 + 16 NA Intergenic Intergenic 4846 FBgn0020377 FBgn0020377 FBtr0303037 Sr-CII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9670 chr3R 6129726 6129780 + 16 NA exon (FBgn0262617, exon 13 of 14) protein_coding-exon (FBgn0262617, exon 13 of 14) 7564 FBgn0037807 FBgn0037807 FBtr0082240 CG6293 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6314 chr2RHet 122607 122779 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1314 chr2L 9066103 9066525 + 16 NA exon (FBgn0051708, exon 2 of 10) protein_coding-exon (FBgn0051708, exon 2 of 10) 4848 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6958 chr3L 2880049 2880156 + 16 NA promoter-TSS (FBgn0263392) protein_coding-promoter-TSS (FBgn0263392) -944 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11033 chr3R 15910892 15911219 + 16 NA Intergenic Intergenic -2883 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3327 chr2L 21014738 21014848 + 16 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -38240 FBgn0010395 FBgn0010395 FBtr0081461 betaInt-nu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11532 chr3R 21857675 21857875 + 16 NA promoter-TSS (FBgn0002632) protein_coding-promoter-TSS (FBgn0002632) -858 FBgn0002632 FBgn0002632 FBtr0084959 m6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12769 chr3R 27589654 27589728 + 16 NA exon (FBgn0003065, exon 2 of 2) protein_coding-exon (FBgn0003065, exon 2 of 2) 797 FBgn0003065 FBgn0003065 FBtr0085859 CG2150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12504 chr3R 25987590 25987663 + 16 NA Intergenic Intergenic -1431 FBgn0039749 FBgn0039749 FBtr0332535 CG11498 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3661 chr2L 22223193 22223312 + 16 NA Intergenic Intergenic -2899 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6507 chr2RHet 1757117 1757174 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_945 chr2L 6937807 6937943 + 16 NA exon (FBgn0031869, exon 8 of 16) protein_coding-exon (FBgn0031869, exon 8 of 16) 4939 FBgn0031869 FBgn0031869 FBtr0332327 CG18304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3538 chr2L 21961470 21961713 + 16 NA Intergenic Intergenic 31342 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13445 chrX 1395570 1395729 + 16 NA promoter-TSS (FBgn0053513) protein_coding-promoter-TSS (FBgn0053513) 6193 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12720 chr3R 27313110 27313164 + 16 NA Intergenic Intergenic -11824 FBgn0039851 FBgn0039851 FBtr0085790 mey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_89 chr2L 795148 795202 + 16 NA Intergenic Intergenic -4377 FBgn0000442 FBgn0000442 FBtr0078042 Pkg21D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13529 chrX 4305441 4305661 + 16 NA intron (FBgn0052773, intron 3 of 4) protein_coding-intron (FBgn0052773, intron 3 of 4) -1338 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2539 chr2L 16877573 16877667 + 16 NA TTS (FBgn0052832) protein_coding-TTS (FBgn0052832) 1670 FBgn0052832 FBgn0052832 FBtr0080960 CG32832 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1526 chr2L 11330632 11330934 + 16 NA Intergenic Intergenic 12480 FBgn0032360 FBgn0032360 FBtr0080251 CG14926 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9769 chr3R 6867946 6868032 + 16 NA intron (FBgn0083950, intron 12 of 13) protein_coding-intron (FBgn0083950, intron 12 of 15) -46153 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_760 chr2L 5445670 5445735 + 16 NA Intergenic Intergenic -6425 FBgn0051647 FBgn0051647 FBtr0308924 CR31647 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8302 chr3L 16819229 16819283 + 16 NA intron (FBgn0036665, intron 1 of 3) protein_coding-intron (FBgn0036665, intron 1 of 3) 2918 FBgn0036665 FBgn0036665 FBtr0273320 CG13024 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6340 chr2RHet 410062 410249 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4275 chr2R 4363054 4363156 + 16 NA exon (FBgn0050361, exon 13 of 13) protein_coding-exon (FBgn0050361, exon 13 of 13) 3617 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5940 chr2R 18112673 18112867 + 16 NA exon (FBgn0034716, exon 5 of 7) protein_coding-exon (FBgn0034716, exon 5 of 7) -1675 FBgn0034715 FBgn0034715 FBtr0071778 Oatp58Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5709 chr2R 16121368 16121662 + 16 NA exon (FBgn0034484, exon 5 of 6) protein_coding-exon (FBgn0034484, exon 5 of 6) 1213 FBgn0011870 FBgn0011870 FBtr0086314 tRNA:G3:56EFb tRNA Nup98-S2-pascual-garcia2017_R1_peak_3009 chr2L 19301255 19301309 + 16 NA exon (FBgn0032769, exon 3 of 4) protein_coding-exon (FBgn0032769, exon 3 of 4) 976 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11501 chr3R 21751272 21751628 + 16 NA intron (FBgn0039396, intron 3 of 6) protein_coding-intron (FBgn0039396, intron 3 of 6) -3231 FBgn0039395 FBgn0039395 FBtr0084984 CG14546 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12299 chr3R 25163244 25163322 + 16 NA Intergenic Intergenic -17947 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_914 chr2L 6746630 6746684 + 16 NA intron (FBgn0031855, intron 1 of 1) protein_coding-intron (FBgn0031855, intron 1 of 1) -1048 FBgn0051910 FBgn0051910 FBtr0079304 CG31910 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2884 chr2L 18314960 18315296 + 16 NA Intergenic Intergenic -4973 FBgn0000636 FBgn0000636 FBtr0112804 Fas3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13057 chrU 75541 75756 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10551 chr3R 12719445 12719595 + 16 NA intron (FBgn0263595, intron 1 of 1) ncRNA-intron (FBgn0263610, intron 1 of 6) 1388 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_638 chr2L 4429867 4430178 + 16 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -3886 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2109 chr2L 14890491 14890655 + 16 NA Intergenic Intergenic -6858 FBgn0013301 FBgn0013301 FBtr0080681 Mst35Bb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_930 chr2L 6837964 6838155 + 16 NA exon (FBgn0051632, exon 5 of 5) protein_coding-exon (FBgn0051632, exon 5 of 5) -14265 FBgn0017551 FBgn0017551 FBtr0079342 Rca1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3644 chr2L 22195452 22195593 + 16 NA intron (FBgn0259683, intron 5 of 6) protein_coding-intron (FBgn0259683, intron 5 of 6) 18743 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13121 chrU 314455 314737 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5420 chr2R 13707966 13708101 + 16 NA intron (FBgn0259211, intron 2 of 12) protein_coding-intron (FBgn0259211, intron 2 of 12) -3037 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10492 chr3R 12396724 12396778 + 16 NA promoter-TSS (FBgn0038445) protein_coding-promoter-TSS (FBgn0038445) -486 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3583 chr2L 22035420 22035921 + 16 NA Intergenic Intergenic -2190 FBgn0084001 FBgn0084001 FBtr0332199 CG41434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10451 chr3R 12201333 12201387 + 16 NA exon (FBgn0003513, exon 8 of 8) protein_coding-exon (FBgn0003513, exon 8 of 8) -5105 FBgn0038423 FBgn0038423 FBtr0300678 CG10317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6168 chr2R 20129779 20129891 + 16 NA promoter-TSS (FBgn0050418) protein_coding-promoter-TSS (FBgn0050418) -951 FBgn0050418 FBgn0050418 FBtr0072263 nord protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12553 chr3R 26664025 26664083 + 16 NA exon (FBgn0039804, exon 3 of 4) protein_coding-exon (FBgn0039804, exon 3 of 4) 10482 FBgn0039804 FBgn0039804 FBtr0085708 CG15544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11218 chr3R 17325584 17325682 + 16 NA promoter-TSS (FBgn0004863) protein_coding-promoter-TSS (FBgn0004863) -344 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12274 chr3R 25000931 25001105 + 16 NA exon (FBgn0039647, exon 7 of 8) protein_coding-exon (FBgn0039647, exon 7 of 8) 9503 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1182 chr2L 8775250 8775369 + 16 NA exon (FBgn0032068, exon 3 of 5) protein_coding-exon (FBgn0032068, exon 3 of 5) 948 FBgn0032068 FBgn0032068 FBtr0079742 CG9466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8469 chr3L 18059543 18059828 + 16 NA Intergenic Intergenic -1889 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7843 chr3L 12893111 12893329 + 16 NA Intergenic Intergenic 2454 FBgn0036324 FBgn0036324 FBtr0113169 CG12520 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8960 chr3R 448357 448705 + 16 NA exon (FBgn0087012, exon 2 of 7) protein_coding-exon (FBgn0087012, exon 2 of 7) 307 FBgn0087012 FBgn0087012 FBtr0301885 5-HT2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3904 chr2R 182966 183020 + 16 NA Intergenic Intergenic -52549 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_129 chr2L 963947 964005 + 16 NA Intergenic Intergenic 41183 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8821 chr3L 24118463 24119654 + 16 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 51729 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2593 chr2L 17071566 17071900 + 16 NA Intergenic Intergenic -13917 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12409 chr3R 25523402 25523526 + 16 NA TTS (FBgn0039683) protein_coding-TTS (FBgn0039683) 5151 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4473 chr2R 5693401 5693479 + 16 NA intron (FBgn0027589, intron 1 of 8) protein_coding-intron (FBgn0027589, intron 1 of 8) 930 FBgn0027589 FBgn0027589 FBtr0088495 CG1688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1145 chr2L 8648763 8648954 + 16 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -24294 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10482 chr3R 12339783 12339837 + 16 NA exon (FBgn0259244, exon 2 of 17) protein_coding-exon (FBgn0259244, exon 2 of 17) 11287 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7696 chr3L 11845692 11845749 + 16 NA intron (FBgn0085449, intron 2 of 2) protein_coding-intron (FBgn0085449, intron 2 of 2) -4817 FBgn0040816 FBgn0040816 FBtr0076074 CG12521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7946 chr3L 13677013 13677120 + 16 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 63129 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5756 chr2R 16616180 16616299 + 16 NA exon (FBgn0034546, exon 4 of 6) protein_coding-exon (FBgn0034546, exon 4 of 6) 1876 FBgn0034546 FBgn0034546 FBtr0086240 CG13442 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7054 chr3L 4589796 4589850 + 16 NA exon (FBgn0260657, exon 7 of 8) protein_coding-exon (FBgn0260657, exon 7 of 8) -31442 FBgn0052246 FBgn0052246 FBtr0302941 CG32246 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5065 chr2R 10455046 10455100 + 16 NA intron (FBgn0020245, intron 2 of 6) protein_coding-intron (FBgn0020245, intron 5 of 9) 3687 FBgn0020245 FBgn0020245 FBtr0333165 ttv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11673 chr3R 22464298 22464549 + 16 NA Intergenic Intergenic -1325 FBgn0039444 FBgn0039444 FBtr0085035 TwdlD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13691 chrX 12846587 12846747 + 16 NA intron (FBgn0030437, intron 5 of 9) protein_coding-intron (FBgn0030437, intron 5 of 9) 4801 FBgn0030437 FBgn0030437 FBtr0073753 hec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9820 chr3R 7226466 7226588 + 16 NA exon (FBgn0004595, exon 8 of 8) protein_coding-exon (FBgn0004595, exon 8 of 8) -7092 FBgn0037892 FBgn0037892 FBtr0082384 mRpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6133 chr2R 19653657 19653720 + 16 NA intron (FBgn0034903, intron 7 of 13) protein_coding-intron (FBgn0034903, intron 7 of 13) 13424 FBgn0034902 FBgn0034902 FBtr0072091 CG5532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3016 chr2L 19322186 19322341 + 16 NA Intergenic Intergenic 21957 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2556 chr2L 16956716 16956978 + 16 NA Intergenic Intergenic -11473 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5731 chr2R 16357102 16357409 + 16 NA intron (FBgn0086604, intron 13 of 19) protein_coding-intron (FBgn0086604, intron 14 of 15) -33865 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1936 chr2L 14322341 14322466 + 16 NA exon (FBgn0261563, exon 8 of 16) protein_coding-exon (FBgn0261563, exon 8 of 16) -6026 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13302 chrUextra 272024 272439 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2084 chr2L 14782169 14782287 + 16 NA exon (FBgn0028867, exon 4 of 4) pseudogene-exon (FBgn0028867, exon 4 of 4) 882 FBgn0028867 FBgn0028867 FBtr0100604 CR15280 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_13472 chrX 1707400 1707595 + 16 NA intron (FBgn0261548, intron 2 of 3) protein_coding-intron (FBgn0261548, intron 2 of 3) 6877 FBgn0029589 FBgn0029589 FBtr0309971 CG14810 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2329 chr2L 15733935 15734064 + 16 NA intron (FBgn0010382, intron 2 of 4) protein_coding-intron (FBgn0010382, intron 3 of 5) 12610 FBgn0010382 FBgn0010382 FBtr0080777 CycE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12774 chr3R 27641566 27641643 + 16 NA intron (FBgn0039883, intron 1 of 10) protein_coding-intron (FBgn0039883, intron 1 of 7) -3764 FBgn0024891 FBgn0024891 FBtr0085851 ferrochelatase protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7641 chr3L 11125096 11125150 + 16 NA TTS (FBgn0014368) protein_coding-TTS (FBgn0014368) 299 FBgn0052074 FBgn0052074 FBtr0076222 CG32074 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11509 chr3R 21776230 21776284 + 16 NA intron (FBgn0039396, intron 1 of 6) protein_coding-intron (FBgn0039396, intron 1 of 6) 5735 FBgn0039396 FBgn0039396 FBtr0304043 CcapR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4222 chr2R 3920636 3920902 + 16 NA intron (FBgn0025360, intron 1 of 3) protein_coding-intron (FBgn0025360, intron 1 of 3) 1980 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_429 chr2L 2704783 2704956 + 16 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) -8432 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_953 chr2L 7042243 7042387 + 16 NA promoter-TSS (FBgn0262872) protein_coding-promoter-TSS (FBgn0262872) -44 FBgn0262872 FBgn0262872 FBtr0306230 milt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11676 chr3R 22469405 22469746 + 16 NA Intergenic Intergenic 3827 FBgn0039444 FBgn0039444 FBtr0085035 TwdlD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4019 chr2R 1784031 1784165 + 16 NA intron (FBgn0263109, intron 1 of 3) protein_coding-intron (FBgn0263109, intron 1 of 3) 2669 FBgn0263109 FBgn0263109 FBtr0307307 CG43366 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3453 chr2L 21768213 21768357 + 16 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 10275 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_426 chr2L 2701041 2701164 + 16 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) -4665 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1155 chr2L 8666030 8666124 + 16 NA exon (FBgn0011259, exon 22 of 22) protein_coding-exon (FBgn0011259, exon 22 of 22) -7075 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9638 chr3R 5827029 5827086 + 16 NA promoter-TSS (FBgn0037773) protein_coding-promoter-TSS (FBgn0037773) -60 FBgn0037773 FBgn0037773 FBtr0300257 CG5359 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6459 chr2RHet 1306519 1306611 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8700 chr3L 22444453 22444535 + 16 NA Intergenic Intergenic -2979 FBgn0037162 FBgn0037162 FBtr0078503 CG11449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9543 chr3R 5039783 5039962 + 16 NA exon (FBgn0003165, exon 7 of 13) protein_coding-exon (FBgn0003165, exon 7 of 13) 26117 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_740 chr2L 5340017 5340107 + 16 NA exon (FBgn0031703, exon 2 of 3) protein_coding-exon (FBgn0031703, exon 2 of 3) -2259 FBgn0016920 FBgn0016920 FBtr0079074 nompC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4381 chr2R 4955974 4956111 + 16 NA promoter-TSS (FBgn0011746) protein_coding-promoter-TSS (FBgn0011746) -564 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4247 chr2R 4183963 4184295 + 16 NA Intergenic Intergenic -1491 FBgn0262440 FBgn0262440 FBtr0304435 mir-280 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2414 chr2L 16089938 16090276 + 16 NA Intergenic Intergenic -4902 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1918 chr2L 14297541 14297767 + 16 NA intron (FBgn0261563, intron 4 of 12) protein_coding-intron (FBgn0261563, intron 4 of 15) -2260 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_663 chr2L 4525107 4525193 + 16 NA exon (FBgn0053196, exon 27 of 47) protein_coding-exon (FBgn0053196, exon 27 of 47) -48126 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7040 chr3L 4403394 4403448 + 16 NA promoter-TSS (FBgn0035540) protein_coding-promoter-TSS (FBgn0035540) -66 FBgn0035540 FBgn0035540 FBtr0330179 Syx17 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6034 chr2R 18917526 18917580 + 16 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) 12909 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_438 chr2L 2817386 2817501 + 16 NA exon (FBgn0031464, exon 8 of 10) protein_coding-exon (FBgn0031464, exon 8 of 10) -1683 FBgn0031463 FBgn0031463 FBtr0113017 CG15400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11384 chr3R 19521720 19521798 + 16 NA TTS (FBgn0043005) protein_coding-TTS (FBgn0043005) 241 FBgn0039104 FBgn0039104 FBtr0084475 CG10252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4246 chr2R 4164988 4165208 + 16 NA Intergenic Intergenic -8259 FBgn0050371 FBgn0050371 FBtr0088798 CG30371 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1194 chr2L 8788969 8789154 + 16 NA Intergenic Intergenic -6567 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12453 chr3R 25648054 25648145 + 16 NA exon (FBgn0039704, exon 2 of 8) protein_coding-exon (FBgn0039704, exon 2 of 8) 3265 FBgn0039704 FBgn0039704 FBtr0085486 neo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7907 chr3L 13396740 13396897 + 16 NA Intergenic Intergenic -2593 FBgn0002573 FBgn0002573 FBtr0075862 sens protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4382 chr2R 4958462 4958663 + 16 NA intron (FBgn0011746, intron 1 of 4) protein_coding-intron (FBgn0011746, intron 1 of 4) 1956 FBgn0011746 FBgn0011746 FBtr0300501 ana protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6630 chr2RHet 2253130 2253184 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3741 chr2L 22526684 22527070 + 16 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 54395 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13803 chrX 18209991 18210091 + 16 NA intron (FBgn0030912, intron 1 of 3) protein_coding-intron (FBgn0030912, intron 2 of 3) 141 FBgn0030912 FBgn0030912 FBtr0074580 CG6023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5362 chr2R 13132838 13132892 + 16 NA TTS (FBgn0034206) protein_coding-TTS (FBgn0034206) 917 FBgn0034206 FBgn0034206 FBtr0086996 CG18469 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1311 chr2L 9057713 9057805 + 16 NA intron (FBgn0051708, intron 6 of 9) protein_coding-intron (FBgn0051708, intron 6 of 9) 13403 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9689 chr3R 6307249 6307440 + 16 NA Intergenic Intergenic 31434 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6388 chr2RHet 622151 622205 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9201 chr3R 2499776 2500092 + 16 NA intron (FBgn0002522, intron 1 of 2) protein_coding-intron (FBgn0002522, intron 1 of 2) -10238 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1163 chr2L 8743833 8743987 + 16 NA Intergenic Intergenic -3250 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10781 chr3R 14291309 14291363 + 16 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) -53983 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7194 chr3L 6433413 6433467 + 16 NA intron (FBgn0261801, intron 1 of 6) protein_coding-intron (FBgn0261801, intron 1 of 6) 39748 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1248 chr2L 8870935 8871044 + 16 NA Intergenic Intergenic 4222 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7849 chr3L 12956826 12956897 + 16 NA TTS (FBgn0041622) protein_coding-TTS (FBgn0041622) 1978 FBgn0041622 FBgn0041622 FBtr0075902 Or69a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10069 chr3R 9271829 9272020 + 16 NA Intergenic Intergenic -4388 FBgn0038156 FBgn0038156 FBtr0309090 CG14372 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4645 chr2R 7200917 7201223 + 16 NA exon (FBgn0016047, exon 11 of 19) protein_coding-exon (FBgn0016047, exon 11 of 19) 2709 FBgn0262574 FBgn0262574 FBtr0304945 CG43114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10382 chr3R 11746573 11746800 + 16 NA promoter-TSS (FBgn0038385) protein_coding-promoter-TSS (FBgn0038385) 66 FBgn0038385 FBgn0038385 FBtr0083201 CG4221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13452 chrX 1425633 1425779 + 16 NA intron (FBgn0025390, intron 7 of 7) protein_coding-intron (FBgn0025390, intron 7 of 7) 18614 FBgn0025394 FBgn0025394 FBtr0070260 inc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3767 chr2L 22594666 22594726 + 16 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 49831 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1071 chr2L 8470256 8470467 + 16 NA intron (FBgn0262029, intron 1 of 8) protein_coding-intron (FBgn0262029, intron 1 of 8) 3531 FBgn0262029 FBgn0262029 FBtr0303923 d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_293 chr2L 1534753 1534866 + 16 NA Intergenic Intergenic 12118 FBgn0026397 FBgn0026397 FBtr0077874 Or22b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_469 chr2L 3108764 3108826 + 16 NA promoter-TSS (FBgn0005779) protein_coding-promoter-TSS (FBgn0005779) -653 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11246 chr3R 17577693 17577991 + 16 NA exon (FBgn0051233, exon 4 of 4) protein_coding-exon (FBgn0051233, exon 4 of 4) -2204 FBgn0051198 FBgn0051198 FBtr0084128 CG31198 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9318 chr3R 3119131 3119337 + 16 NA intron (FBgn0259172, intron 5 of 8) protein_coding-intron (FBgn0259172, intron 4 of 7) 7550 FBgn0045843 FBgn0045843 FBtr0081581 RacGAP84C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3241 chr2L 20547938 20548154 + 16 NA Intergenic Intergenic -14378 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4747 chr2R 7759749 7759825 + 16 NA exon (FBgn0033661, exon 8 of 13) protein_coding-exon (FBgn0033661, exon 8 of 13) 5339 FBgn0260437 FBgn0260437 FBtr0300860 CR42532 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12626 chr3R 26921861 26921915 + 16 NA intron (FBgn0039816, intron 1 of 3) protein_coding-intron (FBgn0039816, intron 1 of 3) 1152 FBgn0039816 FBgn0039816 FBtr0085741 CG11317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12116 chr3R 24313346 24313464 + 16 NA exon (FBgn0013813, exon 1 of 47) protein_coding-exon (FBgn0013813, exon 1 of 47) 730 FBgn0013813 FBgn0013813 FBtr0301303 Dhc98D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6438 chr2RHet 1088420 1089061 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3611 chr2L 22080279 22080515 + 16 NA exon (FBgn0032971, exon 1 of 1) protein_coding-exon (FBgn0032971, exon 1 of 1) 725 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13149 chrU 1193121 1193231 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10049 chr3R 9126770 9126851 + 16 NA exon (FBgn0038136, exon 6 of 7) protein_coding-exon (FBgn0038136, exon 6 of 7) 2107 FBgn0038136 FBgn0038136 FBtr0082741 CG8774 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12895 chr3RHet 2099883 2100115 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10765 chr3R 14180543 14180597 + 16 NA exon (FBgn0038606, exon 2 of 4) protein_coding-exon (FBgn0038606, exon 2 of 4) 6129 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6904 chr3L 2211802 2211986 + 16 NA exon (FBgn0035316, exon 1 of 1) protein_coding-exon (FBgn0035316, exon 1 of 1) 609 FBgn0035316 FBgn0035316 FBtr0072911 CG15878 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9049 chr3R 1246340 1246394 + 16 NA intron (FBgn0037326, intron 2 of 7) protein_coding-intron (FBgn0037326, intron 2 of 7) 6092 FBgn0037326 FBgn0037326 FBtr0078679 CG14669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11838 chr3R 23221977 23222229 + 16 NA intron (FBgn0016061, intron 8 of 16) protein_coding-intron (FBgn0016061, intron 8 of 16) -26516 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9928 chr3R 8188300 8188735 + 16 NA promoter-TSS (FBgn0065094) ncRNA-promoter-TSS (FBgn0065094) -121 FBgn0065094 FBgn0065094 FBtr0091921 snmRNA:419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3276 chr2L 20699506 20699699 + 16 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 14814 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5126 chr2R 10921041 10921126 + 16 NA intron (FBgn0029082, intron 1 of 11) protein_coding-intron (FBgn0029082, intron 1 of 11) -8739 FBgn0043530 FBgn0043530 FBtr0087420 Obp51a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12482 chr3R 25790450 25790528 + 16 NA intron (FBgn0004622, intron 1 of 9) protein_coding-intron (FBgn0004622, intron 1 of 9) 4680 FBgn0004622 FBgn0004622 FBtr0330298 Takr99D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12795 chr3R 27725611 27725802 + 16 NA intron (FBgn0011224, intron 5 of 14) protein_coding-intron (FBgn0011224, intron 4 of 13) 74140 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11662 chr3R 22432631 22432799 + 16 NA Intergenic Intergenic -12130 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7192 chr3L 6395814 6395899 + 16 NA intron (FBgn0261801, intron 1 of 6) protein_coding-intron (FBgn0261801, intron 1 of 6) 2164 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11745 chr3R 22769665 22769835 + 16 NA intron (FBgn0015541, intron 11 of 12) protein_coding-intron (FBgn0015541, intron 10 of 11) -1506 FBgn0039462 FBgn0039462 FBtr0085067 CG14252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13164 chrU 1327457 1327707 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6945 chr3L 2721441 2721780 + 16 NA exon (FBgn0052296, exon 5 of 5) protein_coding-exon (FBgn0052296, exon 5 of 5) -9920 FBgn0264606 FBgn0264606 FBtr0333631 CG43955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9054 chr3R 1278460 1278869 + 16 NA intron (FBgn0037326, intron 4 of 7) protein_coding-intron (FBgn0037326, intron 4 of 7) 10178 FBgn0037327 FBgn0037327 FBtr0330027 PEK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8759 chr3L 23638350 23638485 + 16 NA intron (FBgn0250816, intron 6 of 6) protein_coding-intron (FBgn0250816, intron 6 of 7) -69974 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4245 chr2R 4148608 4148670 + 16 NA TTS (FBgn0033278) protein_coding-TTS (FBgn0033278) 329 FBgn0033279 FBgn0033279 FBtr0088802 CG2291 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7962 chr3L 13757409 13757717 + 16 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 38937 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6856 chr3L 1688716 1688856 + 16 NA promoter-TSS (FBgn0035260) protein_coding-promoter-TSS (FBgn0035260) -23 FBgn0035260 FBgn0035260 FBtr0303103 CG7991 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7367 chr3L 8097385 8097484 + 16 NA exon (FBgn0262579, exon 5 of 10) protein_coding-exon (FBgn0262579, exon 5 of 10) -4798 FBgn0028379 FBgn0028379 FBtr0076683 fan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9082 chr3R 1550397 1550542 + 16 NA Intergenic Intergenic -7447 FBgn0004878 FBgn0004878 FBtr0078725 cas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9013 chr3R 914487 914645 + 16 NA Intergenic Intergenic -1817 FBgn0010313 FBgn0010313 FBtr0078844 corto protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12390 chr3R 25488492 25488705 + 16 NA Intergenic Intergenic -1903 FBgn0039675 FBgn0039675 FBtr0332440 ppk21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3881 chr2LHet 248795 248914 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7075 chr3L 5006834 5007041 + 16 NA intron (FBgn0005775, intron 3 of 7) protein_coding-intron (FBgn0005775, intron 3 of 7) 5196 FBgn0035585 FBgn0035585 FBtr0073372 CG12027 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8872 chr3LHet 923540 923634 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11878 chr3R 23346552 23346742 + 16 NA promoter-TSS (FBgn0039523) protein_coding-promoter-TSS (FBgn0039523) 59 FBgn0039523 FBgn0039523 FBtr0085185 CG12885 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13225 chrU 2435413 2435527 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12918 chr4 170075 170150 + 16 NA Intergenic Intergenic -1278 FBgn0052006 FBgn0052006 FBtr0089170 CG32006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4600 chr2R 6687206 6687334 + 16 NA TTS (FBgn0027499) protein_coding-TTS (FBgn0027499) -5418 FBgn0053144 FBgn0053144 FBtr0088254 CG33144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3385 chr2L 21360126 21360229 + 16 NA Intergenic Intergenic -1039 FBgn0023090 FBgn0023090 FBtr0081516 dtr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2155 chr2L 15050793 15050960 + 16 NA exon (FBgn0000317, exon 6 of 12) protein_coding-exon (FBgn0000317, exon 6 of 12) 6972 FBgn0000317 FBgn0000317 FBtr0080724 ck protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4120 chr2R 3184611 3184665 + 16 NA exon (FBgn0003174, exon 3 of 9) protein_coding-exon (FBgn0003174, exon 3 of 9) -14275 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_992 chr2L 7374715 7374769 + 16 NA intron (FBgn0031903, intron 3 of 5) protein_coding-intron (FBgn0031903, intron 3 of 5) -2994 FBgn0002938 FBgn0002938 FBtr0079437 ninaC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10307 chr3R 11320532 11320586 + 16 NA exon (FBgn0038345, exon 1 of 1) protein_coding-exon (FBgn0038345, exon 1 of 1) 235 FBgn0038345 FBgn0038345 FBtr0083148 CG5213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8406 chr3L 17586455 17586690 + 16 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) 25853 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_959 chr2L 7112207 7112350 + 16 NA intron (FBgn0085407, intron 1 of 4) protein_coding-intron (FBgn0085407, intron 2 of 5) 21249 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7454 chr3L 8893473 8893578 + 16 NA exon (FBgn0035934, exon 6 of 17) protein_coding-exon (FBgn0035934, exon 6 of 17) -2924 FBgn0052034 FBgn0052034 FBtr0076505 tRNA:CR32034 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9156 chr3R 2125065 2125163 + 16 NA exon (FBgn0040279, exon 1 of 3) protein_coding-exon (FBgn0040279, exon 1 of 3) 260 FBgn0040279 FBgn0040279 FBtr0078606 Osi14 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10422 chr3R 11947587 11947857 + 16 NA Intergenic Intergenic -6729 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2103 chr2L 14872246 14872341 + 16 NA promoter-TSS (FBgn0032553) protein_coding-promoter-TSS (FBgn0032553) -271 FBgn0032553 FBgn0032553 FBtr0304004 CG4480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7088 chr3L 5365069 5365135 + 16 NA Intergenic Intergenic -3994 FBgn0035603 FBgn0035603 FBtr0077154 CG10635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4750 chr2R 7810106 7810179 + 16 NA Intergenic Intergenic -9862 FBgn0033667 FBgn0033667 FBtr0088054 CG13183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1838 chr2L 13761421 13761512 + 16 NA Intergenic Intergenic -9621 FBgn0028541 FBgn0028541 FBtr0080532 TM9SF4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12027 chr3R 23991532 23991701 + 16 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 19014 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9426 chr3R 3967275 3967414 + 16 NA promoter-TSS (FBgn0011959) tRNA-promoter-TSS (FBgn0011959) -580 FBgn0011959 FBgn0011959 FBtr0081809 tRNA:R2:84Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_4957 chr2R 9506930 9507071 + 16 NA Intergenic Intergenic -3593 FBgn0000633 FBgn0000633 FBtr0087625 fas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5171 chr2R 11298535 11298646 + 16 NA intron (FBgn0263980, intron 2 of 15) protein_coding-intron (FBgn0263980, intron 2 of 14) 2239 FBgn0014865 FBgn0014865 FBtr0087386 Mtk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5277 chr2R 12285527 12285699 + 16 NA promoter-TSS (FBgn0264273) protein_coding-promoter-TSS (FBgn0264273) 11584 FBgn0264273 FBgn0264273 FBtr0100001 Sema-2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1694 chr2L 12746036 12746133 + 16 NA Intergenic Intergenic 15756 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_529 chr2L 3606587 3606757 + 16 NA promoter-TSS (FBgn0002985) protein_coding-promoter-TSS (FBgn0002985) 76 FBgn0002985 FBgn0002985 FBtr0077557 odd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10336 chr3R 11460539 11460745 + 16 NA promoter-TSS (FBgn0263040) protein_coding-promoter-TSS (FBgn0263040) -548 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6364 chr2RHet 529724 529862 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13556 chrX 5745031 5745085 + 16 NA Intergenic Intergenic -2778 FBgn0262610 FBgn0262610 FBtr0305284 CG43136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6042 chr2R 18935118 18935172 + 16 NA exon (FBgn0003900, exon 1 of 2) protein_coding-exon (FBgn0003900, exon 1 of 2) 1296 FBgn0003900 FBgn0003900 FBtr0100130 twi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9508 chr3R 4532183 4532315 + 16 NA intron (FBgn0037612, intron 2 of 3) protein_coding-intron (FBgn0037612, intron 2 of 3) -6470 FBgn0037612 FBgn0037612 FBtr0305338 CG8112 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1801 chr2L 13434272 13434478 + 16 NA intron (FBgn0263354, intron 2 of 8) protein_coding-intron (FBgn0263354, intron 2 of 8) -1247 FBgn0026760 FBgn0026760 FBtr0080502 Tehao protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8521 chr3L 18657489 18657638 + 16 NA exon (FBgn0036801, exon 8 of 9) protein_coding-exon (FBgn0036801, exon 8 of 9) -2898 FBgn0260027 FBgn0260027 FBtr0300582 CG42495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5877 chr2R 17471474 17471565 + 16 NA exon (FBgn0050222, exon 3 of 6) protein_coding-exon (FBgn0050222, exon 3 of 6) 522 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9081 chr3R 1544052 1544106 + 16 NA Intergenic Intergenic -1057 FBgn0004878 FBgn0004878 FBtr0078725 cas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5275 chr2R 12279182 12279236 + 16 NA intron (FBgn0264273, intron 1 of 15) protein_coding-intron (FBgn0264273, intron 1 of 15) 5180 FBgn0264273 FBgn0264273 FBtr0100001 Sema-2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9300 chr3R 3036902 3037021 + 16 NA Intergenic Intergenic -2824 FBgn0250845 FBgn0250845 FBtr0081604 CG1288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7875 chr3L 13134842 13134908 + 16 NA Intergenic Intergenic 5506 FBgn0053262 FBgn0053262 FBtr0302393 CG33262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7741 chr3L 12191704 12191792 + 16 NA exon (FBgn0036264, exon 1 of 1) protein_coding-exon (FBgn0036264, exon 1 of 1) 857 FBgn0036264 FBgn0036264 FBtr0076005 CG11529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12968 chr4 797199 797290 + 16 NA TTS (FBgn0005666) protein_coding-TTS (FBgn0005666) 11018 FBgn0039923 FBgn0039923 FBtr0089254 MED26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6514 chr2RHet 1861641 1861744 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_31 chr2L 371159 371368 + 16 NA Intergenic Intergenic -6849 FBgn0000061 FBgn0000061 FBtr0078053 al protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11828 chr3R 23204094 23204228 + 16 NA intron (FBgn0016061, intron 16 of 16) protein_coding-intron (FBgn0016061, intron 16 of 16) -8574 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9525 chr3R 4781133 4781465 + 16 NA intron (FBgn0037645, intron 1 of 1) protein_coding-intron (FBgn0037645, intron 1 of 1) 7384 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7199 chr3L 6470759 6470871 + 16 NA intron (FBgn0261801, intron 4 of 6) protein_coding-intron (FBgn0261801, intron 4 of 6) 10709 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_593 chr2L 4158422 4158554 + 16 NA Intergenic Intergenic 7646 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2716 chr2L 17630863 17630917 + 16 NA Intergenic Intergenic 3031 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10424 chr3R 11953763 11953848 + 16 NA promoter-TSS (FBgn0003319) protein_coding-promoter-TSS (FBgn0003319) -646 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8629 chr3L 21096409 21096576 + 16 NA intron (FBgn0020294, intron 1 of 7) protein_coding-intron (FBgn0020294, intron 1 of 7) -3292 FBgn0020294 FBgn0020294 FBtr0333449 ko protein_coding Nup98-S2-pascual-garcia2017_R1_peak_915 chr2L 6753127 6753330 + 16 NA intron (FBgn0031855, intron 1 of 1) protein_coding-intron (FBgn0031855, intron 1 of 1) 6400 FBgn0031856 FBgn0031856 FBtr0290242 CG11322 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10381 chr3R 11745367 11745441 + 16 NA Intergenic Intergenic -1216 FBgn0038385 FBgn0038385 FBtr0083201 CG4221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9744 chr3R 6698074 6698170 + 16 NA promoter-TSS (FBgn0037849) protein_coding-promoter-TSS (FBgn0037849) -20 FBgn0011768 FBgn0011768 FBtr0082290 Fdh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11540 chr3R 21893721 21893876 + 16 NA Intergenic Intergenic -5065 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5958 chr2R 18226628 18226890 + 16 NA intron (FBgn0034720, intron 8 of 10) protein_coding-intron (FBgn0034720, intron 9 of 13) 6128 FBgn0085237 FBgn0085237 FBtr0112401 CG34208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12702 chr3R 27196004 27196096 + 16 NA exon (FBgn0085376, exon 17 of 17) protein_coding-exon (FBgn0085376, exon 17 of 17) -2099 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10793 chr3R 14342470 14342647 + 16 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 28750 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2734 chr2L 17723251 17723324 + 16 NA intron (FBgn0015609, intron 2 of 22) protein_coding-intron (FBgn0015609, intron 2 of 21) 18606 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1840 chr2L 13766830 13766921 + 16 NA Intergenic Intergenic -4212 FBgn0028541 FBgn0028541 FBtr0080532 TM9SF4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5697 chr2R 16040679 16040733 + 16 NA Intergenic Intergenic 7068 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9141 chr3R 2049048 2049102 + 16 NA Intergenic Intergenic -1572 FBgn0037412 FBgn0037412 FBtr0078615 Osi4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3798 chr2L 22656426 22656693 + 16 NA Intergenic Intergenic -7478 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6697 chr3L 67827 67936 + 16 NA exon (FBgn0002564, exon 2 of 2) protein_coding-exon (FBgn0002564, exon 2 of 2) 1451 FBgn0002564 FBgn0002564 FBtr0072463 Lsp1gamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4990 chr2R 9687331 9687423 + 16 NA intron (FBgn0033869, intron 2 of 4) protein_coding-intron (FBgn0033869, intron 2 of 4) 5095 FBgn0033869 FBgn0033869 FBtr0087630 Cpr50Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7142 chr3L 6041276 6041410 + 16 NA Intergenic Intergenic -2514 FBgn0035665 FBgn0035665 FBtr0077041 Jon65Aiii protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9478 chr3R 4364267 4364413 + 16 NA Intergenic Intergenic -9741 FBgn0040531 FBgn0040531 FBtr0112769 CG11741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5500 chr2R 14383023 14383077 + 16 NA intron (FBgn0028496, intron 2 of 18) protein_coding-intron (FBgn0028496, intron 2 of 18) 2446 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_966 chr2L 7144818 7145037 + 16 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -11400 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2245 chr2L 15424123 15424191 + 16 NA exon (FBgn0001983, exon 2 of 2) protein_coding-exon (FBgn0001983, exon 2 of 2) 1428 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12930 chr4 542233 542391 + 16 NA exon (FBgn0004607, exon 4 of 14) protein_coding-exon (FBgn0004607, exon 4 of 14) 19876 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5934 chr2R 18034978 18035183 + 16 NA intron (FBgn0000008, intron 2 of 9) protein_coding-intron (FBgn0000008, intron 2 of 9) 7640 FBgn0029084 FBgn0029084 FBtr0071766 gom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11417 chr3R 20261654 20261732 + 16 NA intron (FBgn0000036, intron 2 of 9) protein_coding-intron (FBgn0000036, intron 2 of 9) -3896 FBgn0263409 FBgn0263409 FBtr0309188 CR43455 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3775 chr2L 22612151 22612326 + 16 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 32289 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10591 chr3R 13032875 13033180 + 16 NA Intergenic Intergenic 12579 FBgn0051262 FBgn0051262 FBtr0302853 CG31262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7015 chr3L 3958786 3958840 + 16 NA exon (FBgn0035481, exon 3 of 3) protein_coding-exon (FBgn0035481, exon 3 of 3) 5164 FBgn0035481 FBgn0035481 FBtr0333138 CG12605 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13441 chrX 1390173 1390362 + 16 NA promoter-TSS (FBgn0053513) protein_coding-promoter-TSS (FBgn0053513) 11575 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11893 chr3R 23449235 23449484 + 16 NA exon (FBgn0039529, exon 4 of 4) protein_coding-exon (FBgn0039529, exon 4 of 4) 2372 FBgn0039529 FBgn0039529 FBtr0085200 CG5612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8029 chr3L 14238372 14238551 + 16 NA Intergenic Intergenic 8726 FBgn0036417 FBgn0036417 FBtr0075741 CG7906 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2226 chr2L 15361355 15361548 + 16 NA exon (FBgn0032563, exon 1 of 1) protein_coding-exon (FBgn0032563, exon 1 of 1) 176 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10051 chr3R 9146348 9146455 + 16 NA Intergenic Intergenic 11478 FBgn0052473 FBgn0052473 FBtr0082744 CG32473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9661 chr3R 6022390 6022593 + 16 NA exon (FBgn0004575, exon 5 of 13) protein_coding-exon (FBgn0004575, exon 5 of 13) 6080 FBgn0004575 FBgn0004575 FBtr0100472 Syn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3085 chr2L 19729062 19729208 + 16 NA exon (FBgn0000464, exon 14 of 17) protein_coding-exon (FBgn0000464, exon 14 of 17) 6585 FBgn0032815 FBgn0032815 FBtr0331244 CG10462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9698 chr3R 6373622 6373676 + 16 NA intron (FBgn0001235, intron 7 of 12) protein_coding-intron (FBgn0001235, intron 6 of 11) -34871 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1548 chr2L 11514057 11514115 + 16 NA exon (FBgn0032363, exon 3 of 10) protein_coding-exon (FBgn0032363, exon 3 of 10) 2949 FBgn0032363 FBgn0032363 FBtr0080247 CG6509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8612 chr3L 20650865 20650919 + 16 NA Intergenic Intergenic 20593 FBgn0037014 FBgn0037014 FBtr0078243 CG13251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13528 chrX 4269809 4269933 + 16 NA Intergenic Intergenic -2367 FBgn0263589 FBgn0263589 FBtr0309825 CR43614 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9321 chr3R 3127621 3127698 + 16 NA exon (FBgn0259172, exon 1 of 8) protein_coding-exon (FBgn0259172, exon 1 of 8) -2655 FBgn0260713 FBgn0260713 FBtr0301214 CG42544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9306 chr3R 3063115 3063184 + 16 NA exon (FBgn0037487, exon 5 of 6) protein_coding-exon (FBgn0037487, exon 5 of 6) -4333 FBgn0037488 FBgn0037488 FBtr0303218 CG14607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8160 chr3L 15638144 15638276 + 16 NA intron (FBgn0259236, intron 1 of 1) protein_coding-intron (FBgn0259236, intron 1 of 1) -3461 FBgn0262529 FBgn0262529 FBtr0304969 CG43083 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12831 chr3RHet 383819 383913 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3750 chr2L 22554997 22555379 + 16 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 82706 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9906 chr3R 8051353 8051491 + 16 NA promoter-TSS (FBgn0038001) protein_coding-promoter-TSS (FBgn0038001) 376 FBgn0263454 FBgn0263454 FBtr0309310 CR43477 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3523 chr2L 21944832 21945092 + 16 NA Intergenic Intergenic 28601 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4673 chr2R 7375884 7375967 + 16 NA intron (FBgn0001269, intron 1 of 4) protein_coding-intron (FBgn0001269, intron 2 of 5) 12715 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4050 chr2R 2370120 2370198 + 16 NA Intergenic Intergenic 50941 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7427 chr3L 8661170 8661225 + 16 NA Intergenic Intergenic -7662 FBgn0001168 FBgn0001168 FBtr0076569 h protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10093 chr3R 9429279 9429376 + 16 NA Intergenic Intergenic 4216 FBgn0261818 FBgn0261818 FBtr0303306 CG42760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8329 chr3L 17076608 17076662 + 16 NA intron (FBgn0260943, intron 8 of 14) protein_coding-intron (FBgn0260943, intron 8 of 14) 27922 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10625 chr3R 13295771 13295910 + 16 NA Intergenic Intergenic -13342 FBgn0038512 FBgn0038512 FBtr0083443 CG14330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10585 chr3R 12989465 12989519 + 16 NA Intergenic Intergenic -3822 FBgn0038492 FBgn0038492 FBtr0083413 Mur89F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5352 chr2R 13061163 13061224 + 16 NA Intergenic Intergenic -7045 FBgn0034204 FBgn0034204 FBtr0086997 CG10953 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6821 chr3L 1359245 1359305 + 16 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) 8159 FBgn0029514 FBgn0029514 FBtr0310160 CG9166 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12923 chr4 423088 423142 + 16 NA Intergenic Intergenic -6687 FBgn0262636 FBgn0262636 FBtr0307044 Lin29 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11443 chr3R 20797492 20797626 + 16 NA Intergenic Intergenic -12547 FBgn0039257 FBgn0039257 FBtr0305667 tnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_704 chr2L 4874116 4874185 + 16 NA exon (FBgn0051660, exon 13 of 14) protein_coding-exon (FBgn0051660, exon 13 of 14) 8963 FBgn0000286 FBgn0000286 FBtr0089648 Cf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3883 chr2LHet 256275 256554 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1368 chr2L 9641321 9641502 + 16 NA intron (FBgn0032136, intron 1 of 19) protein_coding-intron (FBgn0032136, intron 1 of 19) 7210 FBgn0032136 FBgn0032136 FBtr0303874 CG15828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12599 chr3R 26793180 26793525 + 16 NA Intergenic Intergenic -3310 FBgn0062411 FBgn0062411 FBtr0085750 Ctr1C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8739 chr3L 23499995 23500146 + 16 NA Intergenic Intergenic -48955 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1671 chr2L 12626080 12626149 + 16 NA exon (FBgn0085424, exon 5 of 6) protein_coding-exon (FBgn0085424, exon 5 of 6) 7766 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3964 chr2R 852914 853045 + 16 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 15807 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10291 chr3R 11230627 11230967 + 16 NA exon (FBgn0038337, exon 2 of 6) protein_coding-exon (FBgn0038337, exon 2 of 6) 430 FBgn0038337 FBgn0038337 FBtr0083106 CG6125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11658 chr3R 22406091 22406288 + 16 NA exon (FBgn0263289, exon 19 of 23) protein_coding-exon (FBgn0263289, exon 19 of 23) -38656 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7333 chr3L 7620948 7621002 + 16 NA intron (FBgn0035802, intron 9 of 16) protein_coding-intron (FBgn0035802, intron 7 of 14) -11842 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_9994 chr3R 8731414 8731649 + 16 NA Intergenic Intergenic 5483 FBgn0038090 FBgn0038090 FBtr0082685 CG10909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13836 chrX 20477557 20477611 + 16 NA intron (FBgn0083981, intron 1 of 5) protein_coding-intron (FBgn0083981, intron 1 of 5) 17216 FBgn0083981 FBgn0083981 FBtr0331160 RunxA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7101 chr3L 5671359 5671508 + 16 NA promoter-TSS (FBgn0085447) protein_coding-promoter-TSS (FBgn0085447) -13094 FBgn0085447 FBgn0085447 FBtr0112713 sif protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5167 chr2R 11285926 11286115 + 16 NA Intergenic Intergenic -10331 FBgn0014865 FBgn0014865 FBtr0087386 Mtk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8567 chr3L 19645759 19645873 + 16 NA exon (FBgn0036899, exon 6 of 9) protein_coding-exon (FBgn0036899, exon 6 of 9) -2865 FBgn0022774 FBgn0022774 FBtr0074961 Oat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_109 chr2L 914212 914374 + 16 NA intron (FBgn0046113, intron 1 of 10) protein_coding-intron (FBgn0046113, intron 1 of 10) 207 FBgn0046113 FBgn0046113 FBtr0273244 GluRIIC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3912 chr2R 284132 284291 + 16 NA intron (FBgn0260798, intron 8 of 15) protein_coding-intron (FBgn0260798, intron 7 of 14) 74347 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6211 chr2R 20367901 20368313 + 16 NA intron (FBgn0035010, intron 1 of 8) protein_coding-intron (FBgn0035010, intron 1 of 8) 5198 FBgn0035009 FBgn0035009 FBtr0072297 CG16837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2125 chr2L 14927575 14927751 + 16 NA exon (FBgn0028887, exon 1 of 3) protein_coding-exon (FBgn0028887, exon 1 of 3) 2928 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11593 chr3R 22136989 22137105 + 16 NA Intergenic Intergenic 13950 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3192 chr2L 20377397 20377492 + 16 NA exon (FBgn0032856, exon 6 of 6) protein_coding-exon (FBgn0032856, exon 6 of 6) -3477 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7259 chr3L 6980502 6980701 + 16 NA Intergenic Intergenic -2915 FBgn0250849 FBgn0250849 FBtr0076933 CG32388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_769 chr2L 5491007 5491271 + 16 NA Intergenic Intergenic -26480 FBgn0031707 FBgn0031707 FBtr0329966 CG14020 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4815 chr2R 8294914 8295056 + 16 NA promoter-TSS (FBgn0033730) protein_coding-promoter-TSS (FBgn0033730) -356 FBgn0033730 FBgn0033730 FBtr0087922 Cpr49Ag protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7726 chr3L 12053671 12053727 + 16 NA intron (FBgn0041096, intron 2 of 6) protein_coding-intron (FBgn0041096, intron 2 of 7) 4260 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12429 chr3R 25537600 25537736 + 16 NA Intergenic Intergenic -2593 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9555 chr3R 5103601 5103820 + 16 NA Intergenic Intergenic 10956 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10247 chr3R 10800497 10800551 + 16 NA Intergenic Intergenic -39968 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11580 chr3R 22104037 22104091 + 16 NA Intergenic Intergenic 15680 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11646 chr3R 22324786 22324942 + 16 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 33069 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8241 chr3L 16281946 16282078 + 16 NA promoter-TSS (FBgn0036595) protein_coding-promoter-TSS (FBgn0036595) -490 FBgn0036595 FBgn0036595 FBtr0289963 CG13046 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11431 chr3R 20532570 20532624 + 16 NA exon (FBgn0003429, exon 23 of 25) protein_coding-exon (FBgn0003429, exon 23 of 25) -7909 FBgn0039217 FBgn0039217 FBtr0084687 CG13627 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10949 chr3R 15443669 15443806 + 16 NA exon (FBgn0038720, exon 5 of 7) protein_coding-exon (FBgn0038720, exon 5 of 7) 3123 FBgn0038720 FBgn0038720 FBtr0083810 CG6231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1432 chr2L 10469065 10469156 + 16 NA intron (FBgn0051719, intron 2 of 10) protein_coding-intron (FBgn0051719, intron 2 of 10) 5237 FBgn0051719 FBgn0051719 FBtr0080041 RluA-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6916 chr3L 2278565 2278692 + 16 NA TTS (FBgn0035328) protein_coding-TTS (FBgn0035328) 2078 FBgn0035328 FBgn0035328 FBtr0072883 yellow-g2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9806 chr3R 7161877 7162218 + 16 NA intron (FBgn0004595, intron 1 of 7) protein_coding-intron (FBgn0004595, intron 1 of 7) 3147 FBgn0004595 FBgn0004595 FBtr0304607 pros protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6255 chr2R 20777502 20777850 + 16 NA exon (FBgn0035076, exon 1 of 4) protein_coding-exon (FBgn0035076, exon 1 of 4) 869 FBgn0035076 FBgn0035076 FBtr0072420 Ance-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11732 chr3R 22675368 22675562 + 16 NA intron (FBgn0051072, intron 11 of 17) protein_coding-intron (FBgn0051072, intron 11 of 17) 11628 FBgn0262379 FBgn0262379 FBtr0304222 mir-1012 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4905 chr2R 9081334 9081552 + 16 NA intron (FBgn0053182, intron 1 of 5) protein_coding-intron (FBgn0053182, intron 1 of 5) -3864 FBgn0028991 FBgn0028991 FBtr0100501 seq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9660 chr3R 6019034 6019107 + 16 NA intron (FBgn0004575, intron 1 of 12) protein_coding-intron (FBgn0004575, intron 1 of 12) 2659 FBgn0004575 FBgn0004575 FBtr0100472 Syn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4137 chr2R 3234002 3234056 + 16 NA exon (FBgn0033159, exon 9 of 24) protein_coding-exon (FBgn0033159, exon 9 of 24) 35116 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6432 chr2RHet 955737 955917 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13319 chrUextra 512734 512835 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12227 chr3R 24754884 24755130 + 16 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 6241 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10788 chr3R 14333585 14333639 + 16 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 37696 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2758 chr2L 17803035 17803290 + 16 NA exon (FBgn0262018, exon 7 of 14) protein_coding-exon (FBgn0262018, exon 7 of 14) 9510 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11460 chr3R 21185467 21185556 + 16 NA exon (FBgn0039331, exon 2 of 2) protein_coding-exon (FBgn0039331, exon 2 of 2) 1504 FBgn0039331 FBgn0039331 FBtr0273265 CG11913 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10845 chr3R 14718350 14718480 + 16 NA Intergenic Intergenic -5428 FBgn0038655 FBgn0038655 FBtr0083696 CG14297 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7924 chr3L 13537734 13538132 + 16 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -25228 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2810 chr2L 17987737 17987791 + 16 NA exon (FBgn0032658, exon 2 of 2) protein_coding-exon (FBgn0032658, exon 2 of 2) 1365 FBgn0032658 FBgn0032658 FBtr0081024 CG5681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1269 chr2L 8903478 8903689 + 16 NA intron (FBgn0085427, intron 1 of 11) protein_coding-intron (FBgn0085427, intron 1 of 10) 4779 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11620 chr3R 22216125 22216199 + 16 NA Intergenic Intergenic 13216 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5848 chr2R 17439689 17439870 + 16 NA intron (FBgn0003731, intron 1 of 4) protein_coding-intron (FBgn0003731, intron 1 of 4) 4705 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8802 chr3L 23934914 23935114 + 16 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 32795 FBgn0264570 FBgn0264570 FBtr0333470 CR43942 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3853 chr2L 22924013 22924100 + 16 NA Intergenic Intergenic -5496 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12941 chr4 557875 558091 + 16 NA exon (FBgn0004607, exon 12 of 14) protein_coding-exon (FBgn0004607, exon 12 of 14) 20497 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6609 chr2RHet 2157503 2157769 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13794 chrX 17898035 17898260 + 16 NA intron (FBgn0003380, intron 1 of 6) protein_coding-intron (FBgn0003380, intron 2 of 7) 3492 FBgn0030886 FBgn0030886 FBtr0074539 CG12672 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11998 chr3R 23884615 23884750 + 16 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 32348 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7534 chr3L 10100346 10100533 + 16 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -6458 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1301 chr2L 9030925 9030979 + 16 NA Intergenic Intergenic -5548 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5313 chr2R 12532308 12532492 + 16 NA intron (FBgn0024232, intron 5 of 9) protein_coding-intron (FBgn0024232, intron 6 of 9) 3652 FBgn0024232 FBgn0024232 FBtr0331922 gprs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8796 chr3L 23874147 23874240 + 16 NA TTS (FBgn0264569) ncRNA-TTS (FBgn0264569) 2049 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9404 chr3R 3785721 3786023 + 16 NA exon (FBgn0000504, exon 2 of 5) protein_coding-exon (FBgn0000504, exon 2 of 5) 7258 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11564 chr3R 22006465 22006646 + 16 NA intron (FBgn0051323, intron 1 of 4) protein_coding-intron (FBgn0051323, intron 1 of 4) -4418 FBgn0051086 FBgn0051086 FBtr0084989 CG31086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_332 chr2L 1810537 1810591 + 16 NA Intergenic Intergenic 12767 FBgn0051933 FBgn0051933 FBtr0077896 CG31933 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5266 chr2R 12169595 12170000 + 16 NA TTS (FBgn0034104) protein_coding-TTS (FBgn0034104) 654 FBgn0034105 FBgn0034105 FBtr0087182 CG7755 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9026 chr3R 973751 973805 + 16 NA Intergenic Intergenic -10483 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_519 chr2L 3565936 3566048 + 16 NA Intergenic Intergenic -9358 FBgn0264370 FBgn0264370 FBtr0332221 CR43822 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3101 chr2L 19814024 19814240 + 16 NA exon (FBgn0032824, exon 2 of 2) protein_coding-exon (FBgn0032824, exon 2 of 2) 400 FBgn0032824 FBgn0032824 FBtr0081314 CG13962 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2388 chr2L 16025308 16025486 + 16 NA intron (FBgn0028644, intron 2 of 7) protein_coding-intron (FBgn0028644, intron 2 of 7) -19118 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10283 chr3R 11216816 11217053 + 16 NA exon (FBgn0262483, exon 10 of 14) protein_coding-exon (FBgn0262483, exon 10 of 14) -8261 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10426 chr3R 11955063 11955268 + 16 NA intron (FBgn0003319, intron 1 of 10) protein_coding-intron (FBgn0003319, intron 1 of 10) 714 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5245 chr2R 11953916 11953970 + 16 NA Intergenic Intergenic -1147 FBgn0262446 FBgn0262446 FBtr0304457 mir-137 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7547 chr3L 10250487 10250541 + 16 NA Intergenic Intergenic 9697 FBgn0011569 FBgn0011569 FBtr0076299 can protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11224 chr3R 17371010 17371122 + 16 NA Intergenic Intergenic 11938 FBgn0002941 FBgn0002941 FBtr0330389 slou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7783 chr3L 12456334 12456388 + 16 NA exon (FBgn0000625, exon 5 of 5) protein_coding-exon (FBgn0000625, exon 5 of 5) 4760 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8511 chr3L 18461871 18461963 + 16 NA TTS (FBgn0028415) protein_coding-TTS (FBgn0028415) 801 FBgn0028415 FBgn0028415 FBtr0075116 Met75Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3341 chr2L 21080660 21080821 + 16 NA TTS (FBgn0053511) protein_coding-TTS (FBgn0053511) 1754 FBgn0053511 FBgn0053511 FBtr0091451 CG33511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12431 chr3R 25539169 25539269 + 16 NA Intergenic Intergenic -1042 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11484 chr3R 21684338 21684414 + 16 NA Intergenic Intergenic 7000 FBgn0039379 FBgn0039379 FBtr0084907 CG5886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1572 chr2L 11771453 11771663 + 16 NA Intergenic Intergenic -16903 FBgn0032374 FBgn0032374 FBtr0300370 CG14931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6703 chr3L 279910 280023 + 16 NA exon (FBgn0264707, exon 3 of 16) protein_coding-exon (FBgn0264707, exon 3 of 16) 2529 FBgn0264707 FBgn0264707 FBtr0333957 RhoGEF3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11362 chr3R 19104939 19105020 + 16 NA exon (FBgn0004882, exon 2 of 10) protein_coding-exon (FBgn0004882, exon 2 of 10) -1976 FBgn0025781 FBgn0025781 FBtr0084377 cdc16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_824 chr2L 5845788 5845874 + 16 NA exon (FBgn0085410, exon 2 of 10) protein_coding-exon (FBgn0085410, exon 2 of 10) 21037 FBgn0085410 FBgn0085410 FBtr0330222 TrissinR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11300 chr3R 18117436 18117490 + 16 NA intron (FBgn0051163, intron 15 of 18) protein_coding-intron (FBgn0051163, intron 15 of 18) -1185 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8424 chr3L 17677449 17677546 + 16 NA TTS (FBgn0085280) protein_coding-TTS (FBgn0085280) -5618 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9203 chr3R 2503956 2504062 + 16 NA exon (FBgn0002522, exon 1 of 3) protein_coding-exon (FBgn0002522, exon 1 of 3) -6163 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_807 chr2L 5731096 5731493 + 16 NA intron (FBgn0031736, intron 1 of 3) protein_coding-intron (FBgn0031736, intron 1 of 3) -2483 FBgn0031733 FBgn0031733 FBtr0079167 CG14006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13516 chrX 3642857 3643064 + 16 NA intron (FBgn0086899, intron 1 of 9) protein_coding-intron (FBgn0086899, intron 1 of 9) -23713 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2426 chr2L 16150239 16150560 + 16 NA Intergenic Intergenic -15162 FBgn0085197 FBgn0085197 FBtr0112359 CG34168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12208 chr3R 24610023 24610189 + 16 NA Intergenic Intergenic -5233 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_829 chr2L 5895388 5895502 + 16 NA Intergenic Intergenic -1549 FBgn0002855 FBgn0002855 FBtr0079155 Acp26Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2628 chr2L 17201957 17202061 + 16 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 20071 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1462 chr2L 10719861 10719915 + 16 NA Intergenic Intergenic -4386 FBgn0032289 FBgn0032289 FBtr0273319 CG6431 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_757 chr2L 5418279 5418474 + 16 NA Intergenic Intergenic -13466 FBgn0263866 FBgn0263866 FBtr0329835 CR43713 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1477 chr2L 10870394 10870637 + 16 NA exon (FBgn0032311, exon 1 of 1) protein_coding-exon (FBgn0032311, exon 1 of 1) 348 FBgn0032311 FBgn0032311 FBtr0080144 CG12517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_340 chr2L 1872617 1872671 + 16 NA intron (FBgn0051663, intron 3 of 10) protein_coding-intron (FBgn0051663, intron 3 of 11) 2777 FBgn0031372 FBgn0031372 FBtr0077891 CG7295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4756 chr2R 7833710 7833776 + 16 NA intron (FBgn0033668, intron 1 of 9) protein_coding-intron (FBgn0033668, intron 1 of 8) 6754 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3116 chr2L 19880762 19880930 + 16 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 11704 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4784 chr2R 8011840 8011903 + 16 NA Intergenic Intergenic -5026 FBgn0086677 FBgn0086677 FBtr0088021 jeb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1888 chr2L 14128434 14128606 + 16 NA Intergenic Intergenic -5971 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9464 chr3R 4285643 4285814 + 16 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 17587 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9264 chr3R 2774857 2775049 + 16 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 2 of 6) -16391 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4861 chr2R 8724780 8724889 + 16 NA Intergenic Intergenic 5229 FBgn0033775 FBgn0033775 FBtr0087820 Cyp9h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7298 chr3L 7292567 7292774 + 16 NA intron (FBgn0035756, intron 2 of 12) protein_coding-intron (FBgn0035756, intron 2 of 12) 13326 FBgn0035756 FBgn0035756 FBtr0290001 unc-13-4A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7597 chr3L 10711288 10711678 + 16 NA Intergenic Intergenic -21506 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1952 chr2L 14374599 14374682 + 16 NA Intergenic Intergenic 6530 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5509 chr2R 14453017 14453091 + 16 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 25964 FBgn0085419 FBgn0085419 FBtr0112633 Rgk2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2112 chr2L 14902605 14902703 + 16 NA Intergenic Intergenic -18939 FBgn0013301 FBgn0013301 FBtr0080681 Mst35Bb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2099 chr2L 14842007 14842200 + 16 NA promoter-TSS (FBgn0261568) protein_coding-promoter-TSS (FBgn0261568) -9 FBgn0264349 FBgn0264349 FBtr0332019 CR43805 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4813 chr2R 8286940 8287301 + 16 NA TTS (FBgn0050048) protein_coding-TTS (FBgn0050048) -2600 FBgn0033728 FBgn0033728 FBtr0087920 Cpr49Ae protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2657 chr2L 17304628 17304686 + 16 NA Intergenic Intergenic 7163 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7646 chr3L 11327470 11327628 + 16 NA Intergenic Intergenic -12730 FBgn0036154 FBgn0036154 FBtr0076182 CG6168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4414 chr2R 5261854 5261947 + 16 NA exon (FBgn0033405, exon 2 of 8) protein_coding-exon (FBgn0033405, exon 2 of 8) -11489 FBgn0040775 FBgn0040775 FBtr0088557 CG12158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9548 chr3R 5073779 5073992 + 16 NA exon (FBgn0037664, exon 1 of 5) protein_coding-exon (FBgn0037664, exon 1 of 5) 1514 FBgn0037664 FBgn0037664 FBtr0081973 CG8420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5691 chr2R 16009291 16009345 + 16 NA Intergenic Intergenic 10302 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8783 chr3L 23789527 23789635 + 16 NA Intergenic Intergenic 12250 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_16 chr2L 263891 264221 + 16 NA exon (FBgn0031239, exon 1 of 1) protein_coding-exon (FBgn0031239, exon 1 of 1) 3449 FBgn0031239 FBgn0031239 FBtr0078142 CG17075 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10029 chr3R 8957867 8957930 + 16 NA exon (FBgn0260793, exon 3 of 4) protein_coding-exon (FBgn0260793, exon 3 of 4) 23488 FBgn0260793 FBgn0260793 FBtr0330143 2mit protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7423 chr3L 8620114 8620185 + 16 NA exon (FBgn0035917, exon 2 of 9) protein_coding-exon (FBgn0035917, exon 2 of 9) 2678 FBgn0035917 FBgn0035917 FBtr0089564 Zasp66 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10665 chr3R 13557353 13557417 + 16 NA exon (FBgn0016650, exon 13 of 17) protein_coding-exon (FBgn0016650, exon 13 of 17) -1937 FBgn0038540 FBgn0038540 FBtr0083511 CG14321 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8958 chr3R 429097 429188 + 16 NA Intergenic Intergenic -19082 FBgn0087012 FBgn0087012 FBtr0301885 5-HT2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1356 chr2L 9553479 9554072 + 16 NA intron (FBgn0032129, intron 5 of 8) protein_coding-intron (FBgn0032129, intron 5 of 8) 6651 FBgn0032129 FBgn0032129 FBtr0113030 jp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12993 chr4 964532 964630 + 16 NA exon (FBgn0019985, exon 7 of 9) protein_coding-exon (FBgn0019985, exon 7 of 9) 7136 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6088 chr2R 19328237 19328305 + 16 NA exon (FBgn0026384, exon 1 of 2) protein_coding-exon (FBgn0026384, exon 1 of 2) 317 FBgn0026384 FBgn0026384 FBtr0072023 Or59a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7332 chr3L 7618859 7619079 + 16 NA exon (FBgn0035802, exon 7 of 15) protein_coding-exon (FBgn0035802, exon 7 of 15) -13848 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7602 chr3L 10718219 10718294 + 16 NA Intergenic Intergenic -28279 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3325 chr2L 21001558 21001642 + 16 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -32633 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8498 chr3L 18269627 18269733 + 16 NA Intergenic Intergenic 17682 FBgn0036784 FBgn0036784 FBtr0075132 CG5103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2502 chr2L 16665361 16665453 + 16 NA exon (FBgn0032593, exon 16 of 18) protein_coding-exon (FBgn0032593, exon 16 of 18) 8292 FBgn0259735 FBgn0259735 FBtr0300005 CG42389 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12273 chr3R 24999506 24999770 + 16 NA exon (FBgn0039647, exon 7 of 7) protein_coding-exon (FBgn0039647, exon 7 of 7) 8123 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1595 chr2L 11924000 11924256 + 16 NA intron (FBgn0259225, intron 2 of 9) protein_coding-intron (FBgn0259225, intron 2 of 9) -10377 FBgn0026392 FBgn0026392 FBtr0080278 Or33a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4061 chr2R 2484581 2484729 + 16 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) 3828 FBgn0033076 FBgn0033076 FBtr0305958 CG15233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1602 chr2L 11966650 11966721 + 16 NA intron (FBgn0263019, intron 1 of 1) ncRNA-intron (FBgn0263019, intron 1 of 2) 4409 FBgn0263019 FBgn0263019 FBtr0306898 CR43314 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7034 chr3L 4301116 4301254 + 16 NA intron (FBgn0066365, intron 1 of 2) protein_coding-intron (FBgn0066365, intron 1 of 2) -1681 FBgn0066365 FBgn0066365 FBtr0073343 dyl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4672 chr2R 7373143 7373444 + 16 NA intron (FBgn0001269, intron 1 of 4) protein_coding-intron (FBgn0001269, intron 2 of 5) 10083 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9365 chr3R 3489678 3489880 + 16 NA intron (FBgn0051146, intron 2 of 11) protein_coding-intron (FBgn0051146, intron 2 of 11) 5808 FBgn0051146 FBgn0051146 FBtr0305969 Nlg1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4274 chr2R 4362602 4362818 + 16 NA exon (FBgn0050361, exon 13 of 13) protein_coding-exon (FBgn0050361, exon 13 of 13) 3222 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12312 chr3R 25195943 25196030 + 16 NA Intergenic Intergenic -50650 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5161 chr2R 11185527 11185589 + 16 NA exon (FBgn0034007, exon 1 of 2) protein_coding-exon (FBgn0034007, exon 1 of 2) 276 FBgn0034007 FBgn0034007 FBtr0087394 CG8102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13432 chrX 1324185 1324239 + 16 NA intron (FBgn0259108, intron 3 of 8) protein_coding-intron (FBgn0259108, intron 2 of 7) 21110 FBgn0259108 FBgn0259108 FBtr0112628 futsch protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5972 chr2R 18326911 18327142 + 16 NA Intergenic Intergenic 12042 FBgn0034730 FBgn0034730 FBtr0071830 ppk12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6773 chr3L 917939 918403 + 16 NA intron (FBgn0264574, intron 2 of 14) protein_coding-intron (FBgn0264574, intron 2 of 12) 9059 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11902 chr3R 23478084 23478149 + 16 NA promoter-TSS (FBgn0027494) protein_coding-promoter-TSS (FBgn0027494) -366 FBgn0027494 FBgn0027494 FBtr0085194 RpS10a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_677 chr2L 4673102 4673169 + 16 NA Intergenic Intergenic -9542 FBgn0031620 FBgn0031620 FBtr0077377 CG11929 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12970 chr4 822532 822701 + 16 NA exon (FBgn0039938, exon 3 of 3) protein_coding-exon (FBgn0039938, exon 3 of 3) 2557 FBgn0039939 FBgn0039939 FBtr0089242 CG11231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6801 chr3L 1177229 1177391 + 16 NA promoter-TSS (FBgn0025525) protein_coding-promoter-TSS (FBgn0025525) -34 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5926 chr2R 17943258 17943320 + 16 NA TTS (FBgn0034683) protein_coding-TTS (FBgn0034683) 1897 FBgn0034683 FBgn0034683 FBtr0071805 CG13500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4375 chr2R 4948157 4948211 + 16 NA promoter-TSS (FBgn0033368) protein_coding-promoter-TSS (FBgn0033368) -774 FBgn0033368 FBgn0033368 FBtr0308823 CG13743 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7868 chr3L 13093657 13093791 + 16 NA Intergenic Intergenic -10655 FBgn0036346 FBgn0036346 FBtr0075891 CG11251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_643 chr2L 4433951 4434397 + 16 NA exon (FBgn0085206, exon 2 of 5) protein_coding-exon (FBgn0085206, exon 2 of 5) 266 FBgn0085207 FBgn0085207 FBtr0112370 CG34178 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4287 chr2R 4445241 4445439 + 16 NA Intergenic Intergenic -5582 FBgn0033301 FBgn0033301 FBtr0088736 CG12780 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6611 chr2RHet 2160268 2161148 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9314 chr3R 3112301 3112431 + 16 NA exon (FBgn0045843, exon 2 of 3) protein_coding-exon (FBgn0045843, exon 2 of 3) 682 FBgn0045843 FBgn0045843 FBtr0081581 RacGAP84C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1638 chr2L 12359639 12359727 + 16 NA exon (FBgn0262475, exon 4 of 10) protein_coding-exon (FBgn0262475, exon 4 of 10) 3242 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12096 chr3R 24243661 24243784 + 16 NA promoter-TSS (FBgn0039584) protein_coding-promoter-TSS (FBgn0039584) -208 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11655 chr3R 22380401 22380457 + 16 NA exon (FBgn0263289, exon 4 of 23) protein_coding-exon (FBgn0263289, exon 4 of 23) 18357 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1937 chr2L 14323388 14323474 + 16 NA exon (FBgn0261563, exon 8 of 16) protein_coding-exon (FBgn0261563, exon 8 of 16) -4998 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5686 chr2R 15982591 15982804 + 16 NA Intergenic Intergenic -16319 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6495 chr2RHet 1709734 1709846 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13040 chrU 31349 31416 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5302 chr2R 12448792 12448862 + 16 NA exon (FBgn0034136, exon 3 of 8) protein_coding-exon (FBgn0034136, exon 3 of 8) 3936 FBgn0034136 FBgn0034136 FBtr0330002 DAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2313 chr2L 15617982 15618036 + 16 NA TTS (FBgn0028947) protein_coding-TTS (FBgn0028947) 1007 FBgn0028947 FBgn0028947 FBtr0080753 CG11865 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9986 chr3R 8678739 8678812 + 16 NA Intergenic Intergenic -4634 FBgn0038087 FBgn0038087 FBtr0302367 beat-Va protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2250 chr2L 15432211 15432350 + 16 NA Intergenic Intergenic -1082 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11628 chr3R 22241246 22241597 + 16 NA exon (FBgn0039425, exon 3 of 3) protein_coding-exon (FBgn0039425, exon 3 of 3) 1611 FBgn0039425 FBgn0039425 FBtr0306708 CG5432 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12753 chr3R 27491788 27491981 + 16 NA Intergenic Intergenic -3303 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7039 chr3L 4372133 4372216 + 16 NA intron (FBgn0035538, intron 2 of 4) protein_coding-intron (FBgn0035538, intron 2 of 4) -4716 FBgn0035537 FBgn0035537 FBtr0073338 CG11342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2542 chr2L 16924009 16924217 + 16 NA Intergenic Intergenic -13804 FBgn0026150 FBgn0026150 FBtr0304931 ApepP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12927 chr4 536931 537055 + 16 NA intron (FBgn0004607, intron 3 of 12) protein_coding-intron (FBgn0004607, intron 3 of 13) 14557 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5125 chr2R 10917282 10917398 + 16 NA intron (FBgn0029082, intron 1 of 11) protein_coding-intron (FBgn0029082, intron 1 of 11) -4996 FBgn0043530 FBgn0043530 FBtr0087420 Obp51a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12128 chr3R 24356641 24356748 + 16 NA exon (FBgn0003137, exon 4 of 12) protein_coding-exon (FBgn0003137, exon 4 of 12) 9359 FBgn0003137 FBgn0003137 FBtr0301839 Ppn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10852 chr3R 14761196 14761284 + 16 NA intron (FBgn0261262, intron 2 of 17) protein_coding-intron (FBgn0261262, intron 2 of 18) 6322 FBgn0261262 FBgn0261262 FBtr0304686 CG42613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13003 chr4 1010975 1011048 + 16 NA exon (FBgn0019650, exon 1 of 9) protein_coding-exon (FBgn0019650, exon 1 of 9) 660 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8849 chr3LHet 457602 457741 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12709 chr3R 27270878 27271075 + 16 NA intron (FBgn0261988, intron 3 of 12) protein_coding-intron (FBgn0261988, intron 3 of 12) 14615 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_636 chr2L 4428308 4428504 + 16 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -5502 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6807 chr3L 1203995 1204055 + 16 NA promoter-TSS (FBgn0063667) protein_coding-promoter-TSS (FBgn0063667) 767 FBgn0035189 FBgn0035189 FBtr0072635 CG9119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11675 chr3R 22466475 22466538 + 16 NA exon (FBgn0039444, exon 2 of 2) protein_coding-exon (FBgn0039444, exon 2 of 2) 758 FBgn0039444 FBgn0039444 FBtr0085035 TwdlD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5309 chr2R 12501026 12501086 + 16 NA intron (FBgn0034145, intron 1 of 10) protein_coding-intron (FBgn0034145, intron 1 of 10) 4423 FBgn0034145 FBgn0034145 FBtr0302205 CG5065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7134 chr3L 5997728 5997792 + 16 NA intron (FBgn0052406, intron 1 of 6) protein_coding-intron (FBgn0052406, intron 1 of 6) 6361 FBgn0035657 FBgn0035657 FBtr0077069 alphaKap4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9582 chr3R 5146402 5146527 + 16 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -1028 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_935 chr2L 6864086 6864302 + 16 NA exon (FBgn0031865, exon 2 of 6) protein_coding-exon (FBgn0031865, exon 2 of 6) 6193 FBgn0031865 FBgn0031865 FBtr0079374 Nha1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8483 chr3L 18152023 18152077 + 16 NA exon (FBgn0036781, exon 3 of 6) protein_coding-exon (FBgn0036781, exon 3 of 6) 3572 FBgn0036781 FBgn0036781 FBtr0075134 CG13699 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7573 chr3L 10600996 10601215 + 16 NA Intergenic Intergenic 15571 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8953 chr3R 328573 328731 + 16 NA exon (FBgn0085386, exon 7 of 14) protein_coding-exon (FBgn0085386, exon 7 of 14) 3333 FBgn0085454 FBgn0085454 FBtr0112726 CG34425 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3507 chr2L 21875983 21876357 + 16 NA Intergenic Intergenic -18057 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6436 chr2RHet 1084192 1084289 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2317 chr2L 15627834 15627971 + 16 NA promoter-TSS (FBgn0028945) protein_coding-promoter-TSS (FBgn0028945) -782 FBgn0028945 FBgn0028945 FBtr0080754 CG7631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6334 chr2RHet 397407 397547 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5894 chr2R 17674313 17674408 + 16 NA Intergenic Intergenic 4800 FBgn0034660 FBgn0034660 FBtr0071745 lox2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1025 chr2L 7911290 7911367 + 16 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -20734 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2442 chr2L 16231791 16231858 + 16 NA exon (FBgn0261999, exon 1 of 11) protein_coding-exon (FBgn0261999, exon 1 of 11) 349 FBgn0261999 FBgn0261999 FBtr0303797 CG42817 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3807 chr2L 22701191 22701254 + 16 NA Intergenic Intergenic -10214 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6798 chr3L 1133510 1133648 + 16 NA Intergenic Intergenic -32490 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6321 chr2RHet 145489 145848 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1055 chr2L 8149720 8149832 + 16 NA intron (FBgn0263256, intron 2 of 9) protein_coding-intron (FBgn0031990, intron 1 of 6) 2150 FBgn0051606 FBgn0051606 FBtr0079577 CG31606 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13685 chrX 12771780 12771839 + 16 NA intron (FBgn0259171, intron 2 of 9) protein_coding-intron (FBgn0259171, intron 2 of 9) 19055 FBgn0259171 FBgn0259171 FBtr0333524 Pde9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7082 chr3L 5328568 5328698 + 16 NA Intergenic Intergenic -6551 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_11781 chr3R 23004468 23004651 + 16 NA exon (FBgn0004197, exon 9 of 15) protein_coding-exon (FBgn0004197, exon 9 of 15) 13119 FBgn0003482 FBgn0003482 FBtr0085116 spn-D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_610 chr2L 4260423 4260477 + 16 NA Intergenic Intergenic 2878 FBgn0031591 FBgn0031591 FBtr0077471 CG15425 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_291 chr2L 1531240 1531395 + 16 NA Intergenic Intergenic 8626 FBgn0026397 FBgn0026397 FBtr0077874 Or22b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3132 chr2L 19982276 19982417 + 16 NA intron (FBgn0264443, intron 3 of 5) protein_coding-intron (FBgn0264443, intron 3 of 5) 3517 FBgn0263611 FBgn0263611 FBtr0309974 CR43620 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1927 chr2L 14312546 14312953 + 16 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -15680 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8883 chr3LHet 1091157 1091228 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12920 chr4 190355 190409 + 16 NA exon (FBgn0053978, exon 4 of 4) protein_coding-exon (FBgn0053978, exon 4 of 4) 5384 FBgn0053978 FBgn0053978 FBtr0310436 CG33978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12324 chr3R 25240949 25241020 + 16 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -64436 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13717 chrX 13338846 13338955 + 16 NA Intergenic Intergenic -1039 FBgn0052635 FBgn0052635 FBtr0073780 Neto protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2236 chr2L 15398900 15399034 + 16 NA Intergenic Intergenic 26618 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11712 chr3R 22566477 22566885 + 16 NA Intergenic Intergenic 3333 FBgn0039454 FBgn0039454 FBtr0085043 CG14247 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4773 chr2R 7943627 7943840 + 16 NA exon (FBgn0028407, exon 2 of 4) protein_coding-exon (FBgn0028407, exon 2 of 4) 1140 FBgn0028407 FBgn0028407 FBtr0087980 Drep-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_868 chr2L 6303644 6303698 + 16 NA intron (FBgn0053531, intron 14 of 17) protein_coding-intron (FBgn0053531, intron 14 of 17) 5080 FBgn0264543 FBgn0264543 FBtr0333243 CG43922 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7354 chr3L 7941308 7941508 + 16 NA exon (FBgn0041156, exon 1 of 3) protein_coding-exon (FBgn0041156, exon 1 of 3) 122 FBgn0041156 FBgn0041156 FBtr0076751 exex protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2504 chr2L 16672761 16672842 + 16 NA intron (FBgn0032593, intron 2 of 17) protein_coding-intron (FBgn0032593, intron 2 of 17) 3865 FBgn0032593 FBgn0032593 FBtr0080946 trpgamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1700 chr2L 12755115 12755323 + 16 NA Intergenic Intergenic 6621 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4248 chr2R 4187712 4187997 + 16 NA Intergenic Intergenic 2234 FBgn0262440 FBgn0262440 FBtr0304435 mir-280 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3906 chr2R 185360 185704 + 16 NA Intergenic Intergenic -55088 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10987 chr3R 15667414 15667468 + 16 NA intron (FBgn0051459, intron 3 of 3) protein_coding-intron (FBgn0051459, intron 3 of 3) 874 FBgn0051459 FBgn0051459 FBtr0083812 CG31459 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1716 chr2L 12810797 12811241 + 16 NA Intergenic Intergenic -2679 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4561 chr2R 6275761 6275902 + 16 NA exon (FBgn0261698, exon 2 of 29) protein_coding-exon (FBgn0261698, exon 2 of 29) -8217 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9251 chr3R 2713608 2713804 + 16 NA Intergenic Intergenic 16698 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8583 chr3L 20075474 20075607 + 16 NA intron (FBgn0036934, intron 1 of 2) protein_coding-intron (FBgn0036934, intron 1 of 2) 6567 FBgn0036934 FBgn0036934 FBtr0074871 sNPF-R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4114 chr2R 3114010 3114172 + 16 NA Intergenic Intergenic 8327 FBgn0026389 FBgn0026389 FBtr0089051 Or43a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2335 chr2L 15807631 15807739 + 16 NA Intergenic Intergenic 4456 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5604 chr2R 15447571 15447839 + 16 NA intron (FBgn0003435, intron 5 of 10) protein_coding-intron (FBgn0003435, intron 5 of 9) 4744 FBgn0053535 FBgn0053535 FBtr0100843 tRNA:CR33535 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13205 chrU 2296497 2296659 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10280 chr3R 11212972 11213122 + 16 NA exon (FBgn0262483, exon 7 of 14) protein_coding-exon (FBgn0262483, exon 7 of 14) -4374 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_72 chr2L 755085 755252 + 16 NA exon (FBgn0031275, exon 3 of 10) protein_coding-exon (FBgn0031275, exon 3 of 10) 4559 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10747 chr3R 14060658 14060783 + 16 NA Intergenic Intergenic -1196 FBgn0011701 FBgn0011701 FBtr0083564 repo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2274 chr2L 15509565 15509748 + 16 NA Intergenic Intergenic 10546 FBgn0002524 FBgn0002524 FBtr0080738 lace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12456 chr3R 25662762 25662964 + 16 NA promoter-TSS (FBgn0260969) protein_coding-promoter-TSS (FBgn0260969) -902 FBgn0260969 FBgn0260969 FBtr0301747 CG42592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6792 chr3L 1112219 1112345 + 16 NA Intergenic Intergenic -11193 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3388 chr2L 21368323 21368410 + 16 NA intron (FBgn0041245, intron 1 of 2) protein_coding-intron (FBgn0041245, intron 1 of 2) 1340 FBgn0041245 FBgn0041245 FBtr0081522 Gr39b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1035 chr2L 7976796 7976900 + 16 NA exon (FBgn0085450, exon 1 of 2) protein_coding-exon (FBgn0085450, exon 1 of 2) 217 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5404 chr2R 13541552 13541816 + 16 NA exon (FBgn0050106, exon 1 of 8) protein_coding-exon (FBgn0050106, exon 1 of 8) 117 FBgn0050106 FBgn0050106 FBtr0086893 CCHa1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11816 chr3R 23166386 23166545 + 16 NA exon (FBgn0260487, exon 1 of 7) protein_coding-exon (FBgn0260487, exon 1 of 7) -9861 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7681 chr3L 11725648 11725819 + 16 NA TTS (FBgn0036202) protein_coding-TTS (FBgn0036202) 489 FBgn0052087 FBgn0052087 FBtr0076117 CG32087 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3983 chr2R 1062057 1062198 + 16 NA Intergenic Intergenic 29889 FBgn0033010 FBgn0033010 FBtr0086080 Atf6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5645 chr2R 15690069 15690181 + 16 NA promoter-TSS (FBgn0011897) tRNA-promoter-TSS (FBgn0011897) 29 FBgn0011897 FBgn0011897 FBtr0086334 tRNA:K2:56EF tRNA Nup98-S2-pascual-garcia2017_R1_peak_6649 chr2RHet 2347115 2347169 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5502 chr2R 14386081 14386225 + 16 NA promoter-TSS (FBgn0028496) protein_coding-promoter-TSS (FBgn0028496) -657 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11194 chr3R 17211618 17211692 + 16 NA Intergenic Intergenic -2950 FBgn0004862 FBgn0004862 FBtr0084087 bap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11696 chr3R 22521008 22521094 + 16 NA Intergenic Intergenic -1806 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10448 chr3R 12187180 12187251 + 16 NA exon (FBgn0038422, exon 5 of 5) protein_coding-exon (FBgn0038422, exon 5 of 5) -1385 FBgn0259917 FBgn0259917 FBtr0300198 CG42446 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13144 chrU 1090194 1090300 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12606 chr3R 26821193 26821659 + 16 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) -3247 FBgn0051007 FBgn0051007 FBtr0085747 CG31007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2139 chr2L 14975207 14975542 + 16 NA TTS (FBgn0086711) protein_coding-TTS (FBgn0086711) -3074 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3759 chr2L 22588153 22588207 + 16 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 56347 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_502 chr2L 3405598 3405652 + 16 NA exon (FBgn0031530, exon 8 of 8) protein_coding-exon (FBgn0031530, exon 8 of 8) -4985 FBgn0031531 FBgn0031531 FBtr0077590 CG8840 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11715 chr3R 22578035 22578115 + 16 NA Intergenic Intergenic 14727 FBgn0039454 FBgn0039454 FBtr0085043 CG14247 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3823 chr2L 22746658 22746808 + 16 NA TTS (FBgn0041004) protein_coding-TTS (FBgn0041004) 9781 FBgn0041004 FBgn0041004 FBtr0306550 CG17715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_184 chr2L 1231458 1231512 + 16 NA Intergenic Intergenic -8553 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8615 chr3L 20716081 20716242 + 16 NA Intergenic Intergenic -3861 FBgn0037015 FBgn0037015 FBtr0305579 cmpy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5954 chr2R 18205614 18205676 + 16 NA intron (FBgn0013272, intron 1 of 4) protein_coding-intron (FBgn0013272, intron 2 of 5) -4763 FBgn0013272 FBgn0013272 FBtr0071816 Gp150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7005 chr3L 3680130 3680275 + 16 NA Intergenic Intergenic -8584 FBgn0263495 FBgn0263495 FBtr0309509 CR43484 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12238 chr3R 24783566 24784044 + 16 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 12271 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2349 chr2L 15872139 15872301 + 16 NA Intergenic Intergenic -6791 FBgn0261925 FBgn0261925 FBtr0303589 CG42792 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6212 chr2R 20388710 20388982 + 16 NA exon (FBgn0017556, exon 3 of 3) protein_coding-exon (FBgn0017556, exon 3 of 3) 911 FBgn0017556 FBgn0017556 FBtr0072350 Pros28.1B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13695 chrX 12890674 12890728 + 16 NA intron (FBgn0261379, intron 1 of 4) protein_coding-intron (FBgn0261379, intron 1 of 4) 8211 FBgn0030440 FBgn0030440 FBtr0309878 CG15719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1164 chr2L 8744781 8745018 + 16 NA Intergenic Intergenic -4239 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12815 chr3R 27842944 27843119 + 16 NA Intergenic Intergenic -21064 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10562 chr3R 12760264 12760320 + 16 NA promoter-TSS (FBgn0000015) protein_coding-promoter-TSS (FBgn0000015) -2957 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8806 chr3L 23962132 23962260 + 16 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 17314 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_571 chr2L 3940967 3941021 + 16 NA intron (FBgn0051774, intron 3 of 9) protein_coding-intron (FBgn0051774, intron 3 of 8) -26706 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13465 chrX 1596200 1596274 + 16 NA Intergenic Intergenic -6315 FBgn0023130 FBgn0023130 FBtr0333116 a6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_494 chr2L 3354834 3354977 + 16 NA promoter-TSS (FBgn0020445) protein_coding-promoter-TSS (FBgn0020445) 95 FBgn0020445 FBgn0020445 FBtr0089980 E23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2644 chr2L 17260667 17260870 + 16 NA promoter-TSS (FBgn0032629) protein_coding-promoter-TSS (FBgn0032629) -36 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6851 chr3L 1629750 1629892 + 16 NA promoter-TSS (FBgn0035245) protein_coding-promoter-TSS (FBgn0035245) -1444 FBgn0035246 FBgn0035246 FBtr0072822 CG13928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8064 chr3L 14563425 14563569 + 16 NA Intergenic Intergenic 2957 FBgn0261816 FBgn0261816 FBtr0303303 CG42758 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8375 chr3L 17319654 17319759 + 16 NA Intergenic Intergenic -1088 FBgn0036708 FBgn0036708 FBtr0075248 CG13725 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10274 chr3R 11078368 11078566 + 16 NA exon (FBgn0259823, exon 3 of 5) protein_coding-exon (FBgn0259823, exon 3 of 5) 2651 FBgn0259823 FBgn0259823 FBtr0305613 CG42404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10071 chr3R 9298045 9298381 + 16 NA Intergenic Intergenic -6385 FBgn0040554 FBgn0040554 FBtr0309274 CR17025 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2298 chr2L 15579930 15579984 + 16 NA exon (FBgn0028370, exon 3 of 4) protein_coding-exon (FBgn0028370, exon 3 of 4) 27234 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9154 chr3R 2118978 2119034 + 16 NA TTS (FBgn0037422) protein_coding-TTS (FBgn0037422) 1382 FBgn0037422 FBgn0037422 FBtr0078605 Osi13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3047 chr2L 19549511 19549718 + 16 NA promoter-TSS (FBgn0041180) protein_coding-promoter-TSS (FBgn0041180) 1107 FBgn0041180 FBgn0041180 FBtr0331329 TepIV protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3814 chr2L 22707698 22708117 + 16 NA Intergenic Intergenic -16899 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13321 chrUextra 560191 560245 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2345 chr2L 15856174 15856262 + 16 NA exon (FBgn0028902, exon 3 of 3) protein_coding-exon (FBgn0028902, exon 3 of 3) 2092 FBgn0028902 FBgn0028902 FBtr0080788 Tektin-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13108 chrU 236961 237027 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_423 chr2L 2692401 2692455 + 16 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) 4009 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7853 chr3L 12998856 12999005 + 16 NA promoter-TSS (FBgn0036330) protein_coding-promoter-TSS (FBgn0036330) -987 FBgn0036330 FBgn0036330 FBtr0300699 CG11263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8915 chr3LHet 2001049 2001132 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2587 chr2L 17045881 17046187 + 16 NA Intergenic Intergenic 2247 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2024 chr2L 14574560 14574844 + 16 NA Intergenic Intergenic -10976 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7818 chr3L 12676832 12676886 + 16 NA Intergenic Intergenic -9880 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8098 chr3L 14927266 14927464 + 16 NA intron (FBgn0259099, intron 2 of 10) protein_coding-intron (FBgn0259099, intron 2 of 10) 10066 FBgn0040809 FBgn0040809 FBtr0075674 CG13465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4804 chr2R 8163353 8163414 + 16 NA exon (FBgn0000253, exon 5 of 5) protein_coding-exon (FBgn0000253, exon 5 of 5) 11318 FBgn0000253 FBgn0000253 FBtr0088002 Cam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3595 chr2L 22059870 22060065 + 16 NA Intergenic Intergenic 5313 FBgn0260996 FBgn0260996 FBtr0301799 CG42597 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10009 chr3R 8773831 8773991 + 16 NA Intergenic Intergenic -13563 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5025 chr2R 10088058 10088213 + 16 NA TTS (FBgn0005613) protein_coding-TTS (FBgn0005613) 564 FBgn0033911 FBgn0033911 FBtr0087577 VGAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7397 chr3L 8364985 8365232 + 16 NA promoter-TSS (FBgn0001253) protein_coding-promoter-TSS (FBgn0001253) -397 FBgn0001253 FBgn0001253 FBtr0076607 ImpE1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10032 chr3R 8974394 8974482 + 16 NA intron (FBgn0260793, intron 2 of 3) protein_coding-intron (FBgn0038118, intron 11 of 17) 6948 FBgn0260793 FBgn0260793 FBtr0330143 2mit protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8504 chr3L 18322529 18322708 + 16 NA Intergenic Intergenic -25101 FBgn0015946 FBgn0015946 FBtr0075130 grim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10147 chr3R 9823624 9823919 + 16 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 26316 FBgn0263414 FBgn0263414 FBtr0309198 CR43460 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1713 chr2L 12804047 12804170 + 16 NA Intergenic Intergenic 4232 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11657 chr3R 22405563 22405617 + 16 NA intron (FBgn0263289, intron 16 of 24) protein_coding-intron (FBgn0263289, intron 16 of 22) -39255 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5283 chr2R 12315172 12315423 + 16 NA exon (FBgn0264273, exon 11 of 14) protein_coding-exon (FBgn0264273, exon 11 of 14) -4452 FBgn0034126 FBgn0034126 FBtr0087157 CG4398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2920 chr2L 18717581 18717742 + 16 NA intron (FBgn0032707, intron 1 of 1) protein_coding-intron (FBgn0032707, intron 1 of 1) -3898 FBgn0032706 FBgn0032706 FBtr0114486 Irk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1735 chr2L 12908140 12908335 + 16 NA Intergenic Intergenic -4293 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13215 chrU 2417208 2417602 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12423 chr3R 25531908 25531994 + 16 NA Intergenic Intergenic -8310 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8040 chr3L 14346028 14346082 + 16 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) 16752 FBgn0036421 FBgn0036421 FBtr0113170 CG13481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11844 chr3R 23246899 23247083 + 16 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 16213 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9443 chr3R 4105989 4106043 + 16 NA Intergenic Intergenic 2502 FBgn0010433 FBgn0010433 FBtr0081828 ato protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10296 chr3R 11249658 11250004 + 16 NA exon (FBgn0038339, exon 3 of 5) protein_coding-exon (FBgn0038339, exon 3 of 5) -6326 FBgn0262397 FBgn0262397 FBtr0304297 mir-2c pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3907 chr2R 186350 186810 + 16 NA Intergenic Intergenic -56136 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2423 chr2L 16124246 16124314 + 16 NA Intergenic Intergenic -9228 FBgn0028884 FBgn0028884 FBtr0080816 CG4892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9937 chr3R 8358490 8358686 + 16 NA intron (FBgn0250910, intron 2 of 7) protein_coding-intron (FBgn0250910, intron 2 of 9) 6678 FBgn0028374 FBgn0028374 FBtr0082639 hug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_890 chr2L 6528645 6528777 + 16 NA exon (FBgn0000320, exon 3 of 5) protein_coding-exon (FBgn0000320, exon 3 of 5) 1798 FBgn0000320 FBgn0000320 FBtr0306113 eya protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11366 chr3R 19194524 19194785 + 16 NA Intergenic Intergenic -4178 FBgn0262009 FBgn0262009 FBtr0304566 CG42827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7262 chr3L 6983511 6983726 + 16 NA promoter-TSS (FBgn0045759) protein_coding-promoter-TSS (FBgn0045759) -104 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11503 chr3R 21758253 21758557 + 16 NA TTS (FBgn0054024) ncRNA-TTS (FBgn0054024) 1282 FBgn0054024 FBgn0054024 FBtr0308933 CR34024 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_282 chr2L 1493030 1493213 + 16 NA promoter-TSS (FBgn0053128) protein_coding-promoter-TSS (FBgn0053128) 826 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5323 chr2R 12604538 12604712 + 16 NA intron (FBgn0050463, intron 1 of 11) protein_coding-intron (FBgn0050463, intron 1 of 11) 20730 FBgn0262564 FBgn0262564 FBtr0304892 CG43104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12015 chr3R 23953257 23953402 + 16 NA Intergenic Intergenic -19273 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1743 chr2L 12933476 12933689 + 16 NA Intergenic Intergenic 7971 FBgn0040506 FBgn0040506 FBtr0310556 ACXE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4637 chr2R 7158598 7158759 + 16 NA intron (FBgn0033603, intron 1 of 15) protein_coding-intron (FBgn0033603, intron 1 of 16) 1341 FBgn0033603 FBgn0033603 FBtr0302719 Cpr47Ef protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4149 chr2R 3307079 3307363 + 16 NA exon (FBgn0003460, exon 1 of 7) protein_coding-exon (FBgn0003460, exon 1 of 7) 684 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11602 chr3R 22168913 22169020 + 16 NA intron (FBgn0053970, intron 2 of 8) protein_coding-intron (FBgn0053970, intron 2 of 8) 2229 FBgn0039421 FBgn0039421 FBtr0085027 CG6036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1849 chr2L 13922776 13922856 + 16 NA exon (FBgn0028938, exon 2 of 3) protein_coding-exon (FBgn0028938, exon 2 of 3) 733 FBgn0028938 FBgn0028938 FBtr0302990 CG16886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4566 chr2R 6348253 6348515 + 16 NA intron (FBgn0001122, intron 1 of 4) protein_coding-intron (FBgn0001122, intron 4 of 7) 1716 FBgn0001122 FBgn0001122 FBtr0333064 G-oalpha47A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2221 chr2L 15324500 15324707 + 16 NA Intergenic Intergenic -5702 FBgn0041103 FBgn0041103 FBtr0300021 nht protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8405 chr3L 17585625 17585694 + 16 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -26397 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5856 chr2R 17449754 17449855 + 16 NA intron (FBgn0034636, intron 4 of 5) protein_coding-intron (FBgn0034636, intron 3 of 4) 13736 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5629 chr2R 15578425 15578479 + 16 NA TTS (FBgn0040729) protein_coding-TTS (FBgn0040729) 102 FBgn0040729 FBgn0040729 FBtr0086475 CG15126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4596 chr2R 6671997 6672059 + 16 NA intron (FBgn0053144, intron 1 of 7) protein_coding-intron (FBgn0053144, intron 1 of 7) -6936 FBgn0050018 FBgn0050018 FBtr0304706 mthl13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3395 chr2L 21376658 21376813 + 16 NA exon (FBgn0032945, exon 3 of 3) protein_coding-exon (FBgn0032945, exon 3 of 3) -3265 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8506 chr3L 18404386 18404656 + 16 NA Intergenic Intergenic -12986 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11034 chr3R 15919718 15920003 + 16 NA Intergenic Intergenic -11688 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9736 chr3R 6575908 6575962 + 16 NA exon (FBgn0004841, exon 1 of 8) protein_coding-exon (FBgn0004841, exon 1 of 8) 1015 FBgn0004841 FBgn0004841 FBtr0082315 Takr86C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12057 chr3R 24067732 24067877 + 16 NA Intergenic Intergenic 21540 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12120 chr3R 24327012 24327171 + 16 NA intron (FBgn0013813, intron 21 of 45) protein_coding-intron (FBgn0013813, intron 22 of 46) 14416 FBgn0013813 FBgn0013813 FBtr0301303 Dhc98D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4722 chr2R 7687724 7688062 + 16 NA intron (FBgn0033652, intron 2 of 3) protein_coding-intron (FBgn0033652, intron 2 of 3) 10019 FBgn0033652 FBgn0033652 FBtr0088030 ths protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9864 chr3R 7694986 7695271 + 16 NA promoter-TSS (FBgn0037956) protein_coding-promoter-TSS (FBgn0037956) 55 FBgn0037956 FBgn0037956 FBtr0299594 CG6959 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6301 chr2RHet 51635 51801 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3106 chr2L 19835478 19835727 + 16 NA intron (FBgn0263873, intron 1 of 14) protein_coding-intron (FBgn0263873, intron 2 of 15) 19188 FBgn0043021 FBgn0043021 FBtr0081294 snRNA:U5:38ABb snRNA Nup98-S2-pascual-garcia2017_R1_peak_8913 chr3LHet 1820127 1820317 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3902 chr2R 141055 141225 + 16 NA Intergenic Intergenic -10696 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4799 chr2R 8130276 8130404 + 16 NA exon (FBgn0263021, exon 1 of 2) protein_coding-exon (FBgn0263021, exon 1 of 2) 289 FBgn0263021 FBgn0263021 FBtr0306902 CG43316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11363 chr3R 19105592 19105647 + 16 NA intron (FBgn0004882, intron 1 of 9) protein_coding-intron (FBgn0004882, intron 1 of 9) -1336 FBgn0025781 FBgn0025781 FBtr0084377 cdc16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4060 chr2R 2484171 2484393 + 16 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) 4201 FBgn0033076 FBgn0033076 FBtr0305958 CG15233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3346 chr2L 21128859 21129106 + 16 NA exon (FBgn0040297, exon 19 of 20) protein_coding-exon (FBgn0040297, exon 19 of 20) 13365 FBgn0023388 FBgn0023388 FBtr0301276 Dap160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10290 chr3R 11229435 11229821 + 16 NA exon (FBgn0038337, exon 4 of 6) protein_coding-exon (FBgn0038337, exon 4 of 6) 1599 FBgn0038337 FBgn0038337 FBtr0083106 CG6125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4665 chr2R 7353700 7353844 + 16 NA TTS (FBgn0000581) protein_coding-TTS (FBgn0000581) -9438 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7067 chr3L 4898114 4898327 + 16 NA promoter-TSS (FBgn0035583) protein_coding-promoter-TSS (FBgn0035583) -680 FBgn0035583 FBgn0035583 FBtr0073353 CG13704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2310 chr2L 15608146 15608333 + 16 NA Intergenic Intergenic 3730 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8172 chr3L 15786949 15787239 + 16 NA Intergenic Intergenic -14328 FBgn0036531 FBgn0036531 FBtr0075502 CG6244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1166 chr2L 8747837 8747970 + 16 NA Intergenic Intergenic -4402 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10339 chr3R 11483198 11483252 + 16 NA Intergenic Intergenic -8680 FBgn0053207 FBgn0053207 FBtr0083162 pxb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13018 chr4 1040058 1040215 + 16 NA exon (FBgn0025741, exon 3 of 10) protein_coding-exon (FBgn0025741, exon 3 of 10) 7584 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9198 chr3R 2483117 2483199 + 16 NA promoter-TSS (FBgn0262801) protein_coding-promoter-TSS (FBgn0262801) 50 FBgn0026566 FBgn0026566 FBtr0301623 CG1307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2057 chr2L 14671677 14671731 + 16 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 17621 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8876 chr3LHet 1046851 1047027 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8895 chr3LHet 1271319 1271653 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5626 chr2R 15547461 15547725 + 16 NA TTS (FBgn0034463) protein_coding-TTS (FBgn0034463) 699 FBgn0262418 FBgn0262418 FBtr0309744 mir-6-3 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_523 chr2L 3590952 3591030 + 16 NA promoter-TSS (FBgn0264371) ncRNA-promoter-TSS (FBgn0264371) -690 FBgn0264371 FBgn0264371 FBtr0332223 CR43823 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9379 chr3R 3631297 3631366 + 16 NA TTS (FBgn0037521) protein_coding-TTS (FBgn0037521) -1177 FBgn0037520 FBgn0037520 FBtr0081772 CG18268 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2770 chr2L 17840597 17840775 + 16 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 1 of 13) -28014 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11255 chr3R 17624215 17624354 + 16 NA promoter-TSS (FBgn0262331) pre_miRNA-promoter-TSS (FBgn0262331) -6 FBgn0263521 FBgn0263521 FBtr0309593 mir-4969 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_582 chr2L 4104531 4104585 + 16 NA intron (FBgn0000547, intron 7 of 8) protein_coding-intron (FBgn0000547, intron 7 of 8) -15805 FBgn0020376 FBgn0020376 FBtr0077466 Sr-CIII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6746 chr3L 624300 624381 + 16 NA Intergenic Intergenic -2024 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12204 chr3R 24606405 24606565 + 16 NA Intergenic Intergenic -8854 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8355 chr3L 17219074 17219227 + 16 NA intron (FBgn0260943, intron 2 of 14) protein_coding-intron (FBgn0260943, intron 2 of 14) 12162 FBgn0260943 FBgn0260943 FBtr0113427 Rbp6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3691 chr2L 22327265 22327319 + 16 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -13330 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5837 chr2R 17312898 17312985 + 16 NA intron (FBgn0010415, intron 2 of 6) protein_coding-intron (FBgn0010415, intron 2 of 5) -8372 FBgn0010415 FBgn0010415 FBtr0301557 Sdc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10063 chr3R 9249667 9249852 + 16 NA TTS (FBgn0038153) protein_coding-TTS (FBgn0038153) -2410 FBgn0000046 FBgn0000046 FBtr0082786 Act87E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3530 chr2L 21953233 21953787 + 16 NA Intergenic Intergenic 37149 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4212 chr2R 3897882 3897958 + 16 NA exon (FBgn0033250, exon 9 of 9) protein_coding-exon (FBgn0033250, exon 9 of 9) 3151 FBgn0013308 FBgn0013308 FBtr0088864 Odc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_573 chr2L 3959671 3959801 + 16 NA intron (FBgn0051774, intron 2 of 9) protein_coding-intron (FBgn0051774, intron 2 of 8) 31977 FBgn0051774 FBgn0051774 FBtr0308126 fred protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11615 chr3R 22191770 22191824 + 16 NA Intergenic Intergenic 10587 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12767 chr3R 27581969 27582053 + 16 NA exon (FBgn0017448, exon 7 of 8) protein_coding-exon (FBgn0017448, exon 7 of 8) -1598 FBgn0039872 FBgn0039872 FBtr0300915 salt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_727 chr2L 5160556 5160792 + 16 NA exon (FBgn0261836, exon 6 of 6) protein_coding-exon (FBgn0261836, exon 6 of 6) 8925 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2216 chr2L 15293437 15293653 + 16 NA exon (FBgn0011239, exon 4 of 4) protein_coding-exon (FBgn0011239, exon 4 of 4) 1077 FBgn0011239 FBgn0011239 FBtr0080731 ms(2)35Ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6787 chr3L 1099885 1100181 + 16 NA exon (FBgn0004870, exon 1 of 4) protein_coding-exon (FBgn0004870, exon 1 of 4) 1056 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11 chr2L 60639 60693 + 16 NA intron (FBgn0051973, intron 1 of 13) protein_coding-intron (FBgn0051973, intron 1 of 13) -1398 FBgn0051973 FBgn0051973 FBtr0309229 Cda5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1858 chr2L 13956074 13956290 + 16 NA TTS (FBgn0032536) protein_coding-TTS (FBgn0032536) -1357 FBgn0261514 FBgn0261514 FBtr0304720 nimA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1202 chr2L 8798962 8799384 + 16 NA Intergenic Intergenic -10227 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_40 chr2L 583171 583303 + 16 NA TTS (FBgn0010323) protein_coding-TTS (FBgn0010323) 5751 FBgn0023489 FBgn0023489 FBtr0078070 Pph13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_702 chr2L 4864204 4864348 + 16 NA intron (FBgn0051660, intron 2 of 12) protein_coding-intron (FBgn0051660, intron 2 of 13) 11411 FBgn0051660 FBgn0051660 FBtr0304910 pog protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9657 chr3R 6004494 6004671 + 16 NA exon (FBgn0037796, exon 3 of 10) protein_coding-exon (FBgn0037796, exon 3 of 10) -8375 FBgn0040238 FBgn0040238 FBtr0082183 Best1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10560 chr3R 12756875 12756973 + 16 NA exon (FBgn0000015, exon 5 of 7) protein_coding-exon (FBgn0000015, exon 5 of 7) 411 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2925 chr2L 18740615 18740930 + 16 NA promoter-TSS (FBgn0261806) protein_coding-promoter-TSS (FBgn0261806) 414 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1590 chr2L 11864810 11864865 + 16 NA intron (FBgn0259225, intron 1 of 8) protein_coding-intron (FBgn0259225, intron 3 of 9) 11407 FBgn0261805 FBgn0261805 FBtr0303281 CG42751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4592 chr2R 6608047 6608238 + 16 NA TTS (FBgn0005586) protein_coding-TTS (FBgn0005586) -4633 FBgn0033542 FBgn0033542 FBtr0088215 CG12309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5890 chr2R 17561982 17562036 + 16 NA promoter-TSS (FBgn0050263) protein_coding-promoter-TSS (FBgn0050263) -397 FBgn0050263 FBgn0050263 FBtr0331982 CG30263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3680 chr2L 22292954 22293014 + 16 NA Intergenic Intergenic 43106 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11841 chr3R 23232321 23232590 + 16 NA intron (FBgn0016061, intron 2 of 16) protein_coding-intron (FBgn0016061, intron 2 of 16) 30749 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12613 chr3R 26857002 26857105 + 16 NA Intergenic Intergenic -4015 FBgn0053773 FBgn0053773 FBtr0091774 CG33773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12906 chr4 71212 71418 + 16 NA intron (FBgn0004859, intron 4 of 5) protein_coding-intron (FBgn0004859, intron 4 of 5) 5642 FBgn0004859 FBgn0004859 FBtr0308074 ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7008 chr3L 3811220 3811291 + 16 NA promoter-TSS (FBgn0035464) protein_coding-promoter-TSS (FBgn0035464) -8 FBgn0035464 FBgn0035464 FBtr0073150 CG12006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3769 chr2L 22595717 22595849 + 16 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 48744 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4555 chr2R 6266138 6266361 + 16 NA exon (FBgn0033515, exon 1 of 1) protein_coding-exon (FBgn0033515, exon 1 of 1) 1365 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5625 chr2R 15544353 15544605 + 16 NA promoter-TSS (FBgn0034463) protein_coding-promoter-TSS (FBgn0034463) -784 FBgn0034463 FBgn0034463 FBtr0086471 CG15125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_989 chr2L 7351977 7352204 + 16 NA exon (FBgn0031902, exon 4 of 4) protein_coding-exon (FBgn0031902, exon 4 of 4) -12730 FBgn0031903 FBgn0031903 FBtr0303207 Wnt10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_444 chr2L 2830135 2830254 + 16 NA promoter-TSS (FBgn0031464) protein_coding-promoter-TSS (FBgn0031464) 42 FBgn0031464 FBgn0031464 FBtr0300382 Duox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1221 chr2L 8828554 8828746 + 16 NA exon (FBgn0029123, exon 1 of 1) protein_coding-exon (FBgn0029123, exon 1 of 1) 3025 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3736 chr2L 22493380 22493507 + 16 NA Intergenic Intergenic 20961 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_202 chr2L 1300776 1300869 + 16 NA Intergenic Intergenic -28339 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7490 chr3L 9277911 9278095 + 16 NA exon (FBgn0264000, exon 16 of 17) protein_coding-exon (FBgn0264000, exon 16 of 17) 32925 FBgn0264000 FBgn0264000 FBtr0330341 Glu-RIB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9960 chr3R 8506485 8506539 + 16 NA exon (FBgn0038076, exon 3 of 7) protein_coding-exon (FBgn0038076, exon 3 of 7) 585 FBgn0038076 FBgn0038076 FBtr0082667 Cyp313a4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1006 chr2L 7595961 7596117 + 16 NA Intergenic Intergenic -9561 FBgn0031925 FBgn0031925 FBtr0079471 Cyp4d21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1987 chr2L 14443940 14444103 + 16 NA Intergenic Intergenic 6901 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10489 chr3R 12388885 12388974 + 16 NA intron (FBgn0259244, intron 9 of 12) protein_coding-intron (FBgn0259244, intron 9 of 16) -8308 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4714 chr2R 7635066 7635311 + 16 NA Intergenic Intergenic -20770 FBgn0033650 FBgn0033650 FBtr0088029 CG13193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12198 chr3R 24599574 24599828 + 16 NA Intergenic Intergenic -15638 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13776 chrX 16734125 16734179 + 16 NA TTS (FBgn0024941) protein_coding-TTS (FBgn0024941) 4247 FBgn0024941 FBgn0024941 FBtr0074350 RSG7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2207 chr2L 15240293 15240504 + 16 NA intron (FBgn0028516, intron 3 of 6) protein_coding-intron (FBgn0028516, intron 5 of 8) 5520 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8940 chr3R 8418 8648 + 16 NA exon (FBgn0037213, exon 3 of 4) protein_coding-exon (FBgn0037213, exon 3 of 4) -4152 FBgn0053294 FBgn0053294 FBtr0308945 CR33294 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2584 chr2L 17038660 17038773 + 16 NA Intergenic Intergenic 4449 FBgn0264346 FBgn0264346 FBtr0332013 CR43802 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2612 chr2L 17126370 17126435 + 16 NA promoter-TSS (FBgn0051784) protein_coding-promoter-TSS (FBgn0051784) -441 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3415 chr2L 21609735 21609885 + 16 NA Intergenic Intergenic 8964 FBgn0032955 FBgn0032955 FBtr0100511 CG2201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9649 chr3R 5913126 5913204 + 16 NA Intergenic Intergenic -3738 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8799 chr3L 23899328 23899447 + 16 NA intron (FBgn0058470, intron 6 of 12) protein_coding-intron (FBgn0058470, intron 6 of 12) -2832 FBgn0264570 FBgn0264570 FBtr0333470 CR43942 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_500 chr2L 3395820 3395926 + 16 NA Intergenic Intergenic -2150 FBgn0085204 FBgn0085204 FBtr0112366 CG34175 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7504 chr3L 9580004 9580146 + 16 NA exon (FBgn0261555, exon 2 of 7) protein_coding-exon (FBgn0261555, exon 2 of 7) -10879 FBgn0036013 FBgn0036013 FBtr0076378 CG14177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6853 chr3L 1677837 1677962 + 16 NA intron (FBgn0035260, intron 1 of 3) protein_coding-intron (FBgn0035260, intron 1 of 3) -5172 FBgn0035256 FBgn0035256 FBtr0072803 CG13930 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12440 chr3R 25581324 25581768 + 16 NA Intergenic Intergenic 6605 FBgn0260990 FBgn0260990 FBtr0085477 yata protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3073 chr2L 19693393 19693447 + 16 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 7548 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1943 chr2L 14342960 14343014 + 16 NA exon (FBgn0028916, exon 3 of 7) protein_coding-exon (FBgn0028916, exon 3 of 7) 3701 FBgn0264253 FBgn0264253 FBtr0080642 Send2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8871 chr3LHet 922945 923182 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12340 chr3R 25327029 25327109 + 16 NA exon (FBgn0039668, exon 3 of 8) protein_coding-exon (FBgn0039668, exon 3 of 8) 2450 FBgn0039668 FBgn0039668 FBtr0085431 Trc8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_614 chr2L 4291321 4291375 + 16 NA intron (FBgn0010473, intron 2 of 12) protein_coding-intron (FBgn0010473, intron 2 of 6) 8200 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1264 chr2L 8889431 8889485 + 16 NA Intergenic Intergenic -2031 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11245 chr3R 17576716 17577007 + 16 NA exon (FBgn0051233, exon 2 of 4) protein_coding-exon (FBgn0051233, exon 2 of 4) 1286 FBgn0051233 FBgn0051233 FBtr0084127 CG31233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6810 chr3L 1217057 1217127 + 16 NA TTS (FBgn0004429) protein_coding-TTS (FBgn0004429) 1604 FBgn0004429 FBgn0004429 FBtr0072633 LysP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1913 chr2L 14292203 14292286 + 16 NA TTS (FBgn0263648) ncRNA-TTS (FBgn0263648) 1043 FBgn0263648 FBgn0263648 FBtr0310012 CR43639 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12033 chr3R 24018525 24018579 + 16 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 45950 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12287 chr3R 25071378 25071580 + 16 NA promoter-TSS (FBgn0051445) protein_coding-promoter-TSS (FBgn0051445) -930 FBgn0051445 FBgn0051445 FBtr0085401 CG31445 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10514 chr3R 12520115 12520491 + 16 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -38814 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7703 chr3L 11889642 11889754 + 16 NA Intergenic Intergenic -2007 FBgn0263615 FBgn0263615 FBtr0309979 CR43624 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1624 chr2L 12271868 12272034 + 16 NA exon (FBgn0000114, exon 3 of 12) protein_coding-exon (FBgn0000114, exon 3 of 12) 64242 FBgn0051759 FBgn0051759 FBtr0290239 CG31759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1558 chr2L 11590321 11590473 + 16 NA TTS (FBgn0032367) protein_coding-TTS (FBgn0032367) 1281 FBgn0032367 FBgn0032367 FBtr0080270 CG6555 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11419 chr3R 20335837 20335970 + 16 NA exon (FBgn0004118, exon 10 of 11) protein_coding-exon (FBgn0004118, exon 10 of 11) 4920 FBgn0004118 FBgn0004118 FBtr0084682 nAcRbeta-96A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10706 chr3R 13760852 13761054 + 16 NA intron (FBgn0263995, intron 1 of 9) protein_coding-intron (FBgn0263995, intron 1 of 10) -8875 FBgn0263995 FBgn0263995 FBtr0330280 cpo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9510 chr3R 4589195 4589558 + 16 NA intron (FBgn0083971, intron 2 of 4) protein_coding-intron (FBgn0037625, intron 2 of 3) 4537 FBgn0037625 FBgn0037625 FBtr0081943 CG11768 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_285 chr2L 1509707 1509814 + 16 NA Intergenic Intergenic -6857 FBgn0031344 FBgn0031344 FBtr0077933 CG7420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7945 chr3L 13675503 13675557 + 16 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 61593 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3513 chr2L 21883652 21883742 + 16 NA Intergenic Intergenic -10530 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12310 chr3R 25188339 25188422 + 16 NA Intergenic Intergenic -43044 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13822 chrX 18972048 18972102 + 16 NA exon (FBgn0030980, exon 2 of 2) protein_coding-exon (FBgn0030980, exon 2 of 2) 317 FBgn0030980 FBgn0030980 FBtr0074664 CG7406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_681 chr2L 4688107 4688241 + 16 NA TTS (FBgn0031620) protein_coding-TTS (FBgn0031620) 661 FBgn0031621 FBgn0031621 FBtr0077378 CG15634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6 chr2L 28026 28108 + 16 NA exon (FBgn0051973, exon 10 of 13) protein_coding-exon (FBgn0051973, exon 10 of 13) -2912 FBgn0031209 FBgn0031209 FBtr0113008 Ir21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11328 chr3R 18669224 18669389 + 16 NA TTS (FBgn0039029) protein_coding-TTS (FBgn0039029) 1728 FBgn0039029 FBgn0039029 FBtr0084314 CG4704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4028 chr2R 1931960 1932014 + 16 NA exon (FBgn0033055, exon 5 of 5) protein_coding-exon (FBgn0033055, exon 5 of 5) 1827 FBgn0033055 FBgn0033055 FBtr0085974 tbce protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10438 chr3R 11998636 11998690 + 16 NA intron (FBgn0038404, intron 1 of 5) protein_coding-intron (FBgn0038404, intron 1 of 6) 932 FBgn0038404 FBgn0038404 FBtr0113241 CG8925 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12235 chr3R 24777590 24777686 + 16 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 18438 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3058 chr2L 19636996 19637092 + 16 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 50421 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8740 chr3L 23518093 23518147 + 16 NA Intergenic Intergenic -30905 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3203 chr2L 20392644 20392813 + 16 NA intron (FBgn0032857, intron 1 of 1) protein_coding-intron (FBgn0032857, intron 1 of 1) 6666 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9542 chr3R 5033206 5033362 + 16 NA intron (FBgn0003165, intron 8 of 12) protein_coding-intron (FBgn0003165, intron 8 of 12) 30045 FBgn0037662 FBgn0037662 FBtr0081972 CG11997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10966 chr3R 15559069 15559196 + 16 NA intron (FBgn0024963, intron 1 of 12) protein_coding-intron (FBgn0024963, intron 1 of 11) 2451 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5473 chr2R 14125729 14125794 + 16 NA Intergenic Intergenic 5493 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3013 chr2L 19316463 19316557 + 16 NA Intergenic Intergenic 16204 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10535 chr3R 12630881 12630994 + 16 NA Intergenic Intergenic 16904 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7165 chr3L 6230496 6230717 + 16 NA exon (FBgn0035695, exon 4 of 9) protein_coding-exon (FBgn0035695, exon 4 of 9) 1485 FBgn0035695 FBgn0035695 FBtr0332068 CG10226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10757 chr3R 14136453 14136720 + 16 NA promoter-TSS (FBgn0038603) protein_coding-promoter-TSS (FBgn0038603) 42 FBgn0038603 FBgn0038603 FBtr0083592 PKD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13165 chrU 1343386 1343440 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3677 chr2L 22280318 22280395 + 16 NA Intergenic Intergenic 30478 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11518 chr3R 21792752 21792989 + 16 NA TTS (FBgn0000206) protein_coding-TTS (FBgn0000206) 5154 FBgn0000206 FBgn0000206 FBtr0084949 boss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3391 chr2L 21374606 21374660 + 16 NA exon (FBgn0032945, exon 2 of 3) protein_coding-exon (FBgn0032945, exon 2 of 3) 3406 FBgn0032945 FBgn0032945 FBtr0081517 CG8665 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7725 chr3L 12047565 12047625 + 16 NA intron (FBgn0041096, intron 2 of 6) protein_coding-intron (FBgn0041096, intron 2 of 7) 9916 FBgn0263647 FBgn0263647 FBtr0310008 CG43638 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10661 chr3R 13538703 13538761 + 16 NA intron (FBgn0261885, intron 2 of 15) protein_coding-intron (FBgn0261885, intron 2 of 15) 5327 FBgn0261885 FBgn0261885 FBtr0301487 osa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12365 chr3R 25402729 25402944 + 16 NA Intergenic Intergenic 10986 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8987 chr3R 694591 694912 + 16 NA exon (FBgn0003002, exon 3 of 3) protein_coding-exon (FBgn0003002, exon 3 of 3) 9504 FBgn0020280 FBgn0020280 FBtr0078852 laf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9248 chr3R 2690358 2690674 + 16 NA exon (FBgn0001077, exon 1 of 2) protein_coding-exon (FBgn0001077, exon 1 of 2) 470 FBgn0001077 FBgn0001077 FBtr0081625 ftz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2291 chr2L 15553347 15553401 + 16 NA intron (FBgn0028370, intron 1 of 3) protein_coding-intron (FBgn0028370, intron 1 of 3) 651 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7601 chr3L 10717887 10718050 + 16 NA Intergenic Intergenic -27991 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1727 chr2L 12867470 12867524 + 16 NA Intergenic Intergenic -44710 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6512 chr2RHet 1860221 1860488 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11795 chr3R 23130747 23130801 + 16 NA intron (FBgn0039510, intron 22 of 30) protein_coding-intron (FBgn0039510, intron 23 of 31) -12863 FBgn0040609 FBgn0040609 FBtr0085172 CG3348 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5788 chr2R 16874305 16874530 + 16 NA promoter-TSS (FBgn0034567) protein_coding-promoter-TSS (FBgn0034567) -417 FBgn0034567 FBgn0034567 FBtr0071553 CG15651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4611 chr2R 6855130 6855187 + 16 NA Intergenic Intergenic -25952 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8003 chr3L 14101310 14101403 + 16 NA promoter-TSS (FBgn0036411) protein_coding-promoter-TSS (FBgn0036411) -138 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4235 chr2R 4069862 4069989 + 16 NA intron (FBgn0053087, intron 1 of 21) protein_coding-intron (FBgn0053087, intron 1 of 22) 8255 FBgn0053087 FBgn0053087 FBtr0331381 LRP1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4203 chr2R 3883875 3884075 + 16 NA intron (FBgn0027788, intron 2 of 2) protein_coding-intron (FBgn0027788, intron 2 of 2) -1502 FBgn0033248 FBgn0033248 FBtr0088870 Dic3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1805 chr2L 13457722 13457776 + 16 NA exon (FBgn0261991, exon 1 of 1) protein_coding-exon (FBgn0261991, exon 1 of 1) 113 FBgn0261991 FBgn0261991 FBtr0303820 CG42809 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7123 chr3L 5932052 5932249 + 16 NA intron (FBgn0053993, intron 1 of 5) protein_coding-intron (FBgn0053993, intron 1 of 5) -3747 FBgn0053993 FBgn0053993 FBtr0301034 CG33993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9857 chr3R 7626614 7626668 + 16 NA exon (FBgn0051116, exon 6 of 16) protein_coding-exon (FBgn0051116, exon 6 of 16) -4484 FBgn0025802 FBgn0025802 FBtr0082529 Sbf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_706 chr2L 4901593 4901707 + 16 NA exon (FBgn0031645, exon 3 of 7) protein_coding-exon (FBgn0031645, exon 3 of 7) 5105 FBgn0031646 FBgn0031646 FBtr0077403 CG2837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3890 chr2LHet 287769 287824 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8257 chr3L 16387674 16387942 + 16 NA promoter-TSS (FBgn0036627) protein_coding-promoter-TSS (FBgn0036627) 79 FBgn0036627 FBgn0036627 FBtr0075388 Grp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1710 chr2L 12796374 12796626 + 16 NA Intergenic Intergenic 11840 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11186 chr3R 17112276 17112399 + 16 NA intron (FBgn0038880, intron 3 of 5) protein_coding-intron (FBgn0038880, intron 3 of 5) 3418 FBgn0038879 FBgn0038879 FBtr0084056 CG17298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5920 chr2R 17894286 17894450 + 16 NA intron (FBgn0085399, intron 2 of 8) protein_coding-intron (FBgn0085399, intron 2 of 8) -20047 FBgn0050401 FBgn0050401 FBtr0071731 CG30401 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1105 chr2L 8580662 8580726 + 16 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 9806 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10031 chr3R 8959222 8959442 + 16 NA intron (FBgn0260793, intron 2 of 3) protein_coding-intron (FBgn0038118, intron 11 of 17) 22054 FBgn0260793 FBgn0260793 FBtr0330143 2mit protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11049 chr3R 16012136 16012484 + 16 NA Intergenic Intergenic 17152 FBgn0038774 FBgn0038774 FBtr0083866 CG5023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_14 chr2L 248248 248339 + 16 NA intron (FBgn0086902, intron 1 of 16) protein_coding-intron (FBgn0086902, intron 1 of 17) 2530 FBgn0086902 FBgn0086902 FBtr0078145 kis protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7312 chr3L 7443413 7443608 + 16 NA promoter-TSS (FBgn0053278) protein_coding-promoter-TSS (FBgn0053278) -443 FBgn0053278 FBgn0053278 FBtr0076857 CG33278 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2965 chr2L 19091608 19091829 + 16 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -10326 FBgn0263982 FBgn0263982 FBtr0330018 CG43731 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12045 chr3R 24047079 24047236 + 16 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 42187 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8258 chr3L 16390485 16390787 + 16 NA exon (FBgn0036628, exon 6 of 6) protein_coding-exon (FBgn0036628, exon 6 of 6) 2521 FBgn0036628 FBgn0036628 FBtr0075415 CG13035 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8760 chr3L 23638657 23638804 + 16 NA intron (FBgn0250816, intron 6 of 6) protein_coding-intron (FBgn0250816, intron 6 of 7) -69661 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6516 chr2RHet 1867118 1867305 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8721 chr3L 23299149 23299342 + 16 NA Intergenic Intergenic 31955 FBgn0010215 FBgn0010215 FBtr0070038 alpha-Cat protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9524 chr3R 4773534 4773712 + 16 NA Intergenic Intergenic -2886 FBgn0037644 FBgn0037644 FBtr0082015 CG11964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4262 chr2R 4263207 4263516 + 16 NA intron (FBgn0261588, intron 2 of 10) protein_coding-intron (FBgn0261588, intron 2 of 10) 4783 FBgn0033287 FBgn0033287 FBtr0088740 CG8701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7523 chr3L 10008928 10008982 + 16 NA intron (FBgn0040823, intron 2 of 6) protein_coding-intron (FBgn0040823, intron 2 of 5) 41204 FBgn0040823 FBgn0040823 FBtr0076353 dpr6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4047 chr2R 2084106 2084160 + 16 NA promoter-TSS (FBgn0262867) protein_coding-promoter-TSS (FBgn0262867) -266 FBgn0262867 FBgn0262867 FBtr0086003 Ptr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8432 chr3L 17698796 17698850 + 16 NA intron (FBgn0052183, intron 1 of 9) protein_coding-intron (FBgn0052183, intron 1 of 9) 14131 FBgn0261294 FBgn0261294 FBtr0091928 CheB74a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4311 chr2R 4645620 4645694 + 16 NA exon (FBgn0027585, exon 6 of 8) protein_coding-exon (FBgn0027585, exon 6 of 8) 20782 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5280 chr2R 12299625 12299679 + 16 NA intron (FBgn0264273, intron 2 of 15) protein_coding-intron (FBgn0264273, intron 1 of 13) 7251 FBgn0029153 FBgn0029153 FBtr0100603 Menl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_36 chr2L 399903 399972 + 16 NA exon (FBgn0031251, exon 4 of 5) protein_coding-exon (FBgn0031251, exon 4 of 5) 2117 FBgn0031251 FBgn0031251 FBtr0331204 CG4213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11335 chr3R 18791321 18791375 + 16 NA promoter-TSS (FBgn0051281) protein_coding-promoter-TSS (FBgn0051281) -658 FBgn0051281 FBgn0051281 FBtr0310110 Tpl94D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3962 chr2R 849072 849194 + 16 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 11961 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11670 chr3R 22455958 22456032 + 16 NA exon (FBgn0039440, exon 1 of 1) protein_coding-exon (FBgn0039440, exon 1 of 1) 317 FBgn0039440 FBgn0039440 FBtr0114538 TwdlJ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3817 chr2L 22712538 22712592 + 16 NA Intergenic Intergenic -21557 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12083 chr3R 24203238 24203430 + 16 NA Intergenic Intergenic 25370 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13129 chrU 476356 476410 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11722 chr3R 22608373 22608667 + 16 NA TTS (FBgn0261860) protein_coding-TTS (FBgn0261860) 1410 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4108 chr2R 3060917 3060971 + 16 NA intron (FBgn0003090, intron 1 of 5) protein_coding-intron (FBgn0003090, intron 1 of 5) -2447 FBgn0033149 FBgn0033149 FBtr0089045 CG11060 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_71 chr2L 753135 753229 + 16 NA exon (FBgn0031275, exon 1 of 10) protein_coding-exon (FBgn0031275, exon 1 of 10) 2573 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3506 chr2L 21875121 21875198 + 16 NA Intergenic Intergenic -19068 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6069 chr2R 19196649 19196704 + 16 NA exon (FBgn0034842, exon 2 of 2) protein_coding-exon (FBgn0034842, exon 2 of 2) 663 FBgn0034842 FBgn0034842 FBtr0072045 Prosbeta5R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11310 chr3R 18182329 18182408 + 16 NA promoter-TSS (FBgn0038947) protein_coding-promoter-TSS (FBgn0038947) -39 FBgn0038947 FBgn0038947 FBtr0084209 sar1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6538 chr2RHet 1907947 1908121 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4165 chr2R 3326892 3327120 + 16 NA Intergenic Intergenic -1192 FBgn0033169 FBgn0033169 FBtr0088971 CG11123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5712 chr2R 16126949 16127188 + 16 NA promoter-TSS (FBgn0034487) protein_coding-promoter-TSS (FBgn0034487) -164 FBgn0034486 FBgn0034486 FBtr0086323 CG13869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2273 chr2L 15498975 15499112 + 16 NA promoter-TSS (FBgn0002524) protein_coding-promoter-TSS (FBgn0002524) -67 FBgn0002524 FBgn0002524 FBtr0080738 lace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8550 chr3L 19130577 19130631 + 16 NA intron (FBgn0036851, intron 1 of 4) protein_coding-intron (FBgn0036851, intron 1 of 4) 1471 FBgn0036851 FBgn0036851 FBtr0330092 CG14082 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3261 chr2L 20616520 20616711 + 16 NA promoter-TSS (FBgn0262445) pre_miRNA-promoter-TSS (FBgn0262445) -58 FBgn0262445 FBgn0262445 FBtr0304455 mir-133 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1723 chr2L 12847392 12847587 + 16 NA Intergenic Intergenic -24702 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2007 chr2L 14514144 14514207 + 16 NA Intergenic Intergenic -3916 FBgn0011862 FBgn0011862 FBtr0089613 tRNA:G3:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_479 chr2L 3226408 3226462 + 16 NA Intergenic Intergenic -26815 FBgn0085422 FBgn0085422 FBtr0112637 CG34393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13349 chrUextra 7328859 7329101 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6283 chr2R 21067260 21067330 + 16 NA Intergenic Intergenic -3057 FBgn0004181 FBgn0004181 FBtr0072454 Peb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1372 chr2L 9699308 9699385 + 16 NA promoter-TSS (FBgn0015393) protein_coding-promoter-TSS (FBgn0015393) -53 FBgn0000273 FBgn0000273 FBtr0079852 Pka-C1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6285 chr2R 21078132 21078186 + 16 NA promoter-TSS (FBgn0035094) protein_coding-promoter-TSS (FBgn0035094) -1828 FBgn0035094 FBgn0035094 FBtr0333170 CG9380 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12384 chr3R 25471600 25471725 + 16 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 14044 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7271 chr3L 7023998 7024067 + 16 NA intron (FBgn0260660, intron 2 of 5) protein_coding-intron (FBgn0260660, intron 4 of 21) -4138 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2436 chr2L 16206612 16206918 + 16 NA Intergenic Intergenic -4694 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10708 chr3R 13817555 13817681 + 16 NA intron (FBgn0263995, intron 3 of 11) protein_coding-intron (FBgn0263995, intron 3 of 11) -27479 FBgn0000477 FBgn0000477 FBtr0083538 DNaseII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6186 chr2R 20231172 20231240 + 16 NA promoter-TSS (FBgn0004101) protein_coding-promoter-TSS (FBgn0004101) 817 FBgn0004101 FBgn0004101 FBtr0072271 bs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4525 chr2R 6203335 6203613 + 16 NA intron (FBgn0026403, intron 1 of 10) protein_coding-intron (FBgn0026403, intron 1 of 11) 2051 FBgn0026403 FBgn0026403 FBtr0088350 Ndg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8206 chr3L 16023468 16023570 + 16 NA promoter-TSS (FBgn0263570) pre_miRNA-promoter-TSS (FBgn0263570) -829 FBgn0263570 FBgn0263570 FBtr0309724 mir-4941 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_9025 chr3R 972164 972283 + 16 NA Intergenic Intergenic -8928 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1272 chr2L 8909525 8909719 + 16 NA intron (FBgn0085427, intron 1 of 11) protein_coding-intron (FBgn0085427, intron 1 of 10) 10818 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_752 chr2L 5407696 5407765 + 16 NA exon (FBgn0016660, exon 3 of 6) protein_coding-exon (FBgn0016660, exon 3 of 6) 3388 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13124 chrU 404176 404304 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5090 chr2R 10618691 10618828 + 16 NA Intergenic Intergenic 7988 FBgn0263376 FBgn0263376 FBtr0309057 CR43428 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3502 chr2L 21871730 21872368 + 16 NA Intergenic Intergenic -22178 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6597 chr2RHet 2129352 2129406 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1107 chr2L 8583556 8583979 + 16 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 10722 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11925 chr3R 23584618 23584770 + 16 NA Intergenic Intergenic 22432 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1500 chr2L 11159861 11160244 + 16 NA TTS (FBgn0259822) protein_coding-TTS (FBgn0259822) -4336 FBgn0032350 FBgn0032350 FBtr0080222 CG6287 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2342 chr2L 15851127 15851204 + 16 NA Intergenic Intergenic -1427 FBgn0028903 FBgn0028903 FBtr0080787 CG13243 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_511 chr2L 3499990 3500135 + 16 NA TTS (FBgn0014396) protein_coding-TTS (FBgn0014396) 7577 FBgn0014396 FBgn0014396 FBtr0333255 tim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_165 chr2L 1091244 1091371 + 16 NA intron (FBgn0031299, intron 1 of 7) protein_coding-intron (FBgn0031299, intron 2 of 8) 10396 FBgn0031298 FBgn0031298 FBtr0332569 Atg4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6232 chr2R 20544827 20544881 + 16 NA Intergenic Intergenic -4193 FBgn0035044 FBgn0035044 FBtr0072323 CG3663 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1502 chr2L 11165857 11166135 + 16 NA intron (FBgn0259822, intron 2 of 8) protein_coding-intron (FBgn0259822, intron 3 of 9) 1900 FBgn0259822 FBgn0259822 FBtr0300537 Ca-beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8097 chr3L 14926895 14927034 + 16 NA intron (FBgn0259099, intron 2 of 10) protein_coding-intron (FBgn0259099, intron 2 of 10) 10467 FBgn0040809 FBgn0040809 FBtr0075674 CG13465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9834 chr3R 7430575 7430647 + 16 NA promoter-TSS (FBgn0051363) protein_coding-promoter-TSS (FBgn0051363) -12645 FBgn0051363 FBgn0051363 FBtr0082457 Jupiter protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11566 chr3R 22007985 22008184 + 16 NA intron (FBgn0051323, intron 1 of 4) protein_coding-intron (FBgn0051323, intron 1 of 4) -2889 FBgn0051086 FBgn0051086 FBtr0084989 CG31086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6444 chr2RHet 1285490 1285544 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2001 chr2L 14484101 14484173 + 16 NA Intergenic Intergenic -6725 FBgn0005771 FBgn0005771 FBtr0080643 noc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2941 chr2L 18862809 18862990 + 16 NA intron (FBgn0003896, intron 4 of 7) protein_coding-intron (FBgn0003896, intron 4 of 8) -3653 FBgn0032720 FBgn0032720 FBtr0089318 mRpL13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3426 chr2L 21666124 21666314 + 16 NA exon (FBgn0032957, exon 9 of 11) protein_coding-exon (FBgn0032957, exon 9 of 11) 7484 FBgn0032956 FBgn0032956 FBtr0085900 Cul-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12582 chr3R 26742304 26742358 + 16 NA exon (FBgn0020912, exon 2 of 5) protein_coding-exon (FBgn0020912, exon 2 of 5) 3721 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2915 chr2L 18674864 18674934 + 16 NA TTS (FBgn0086681) protein_coding-TTS (FBgn0086681) 195 FBgn0261349 FBgn0261349 FBtr0302267 Mst36Fb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4615 chr2R 6876809 6876863 + 16 NA intron (FBgn0040765, intron 4 of 4) protein_coding-intron (FBgn0040765, intron 4 of 4) -47630 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11395 chr3R 19674296 19674354 + 16 NA exon (FBgn0085384, exon 10 of 13) protein_coding-exon (FBgn0085384, exon 10 of 13) 11027 FBgn0004185 FBgn0004185 FBtr0084528 snRNA:U1:95Ca snRNA Nup98-S2-pascual-garcia2017_R1_peak_5590 chr2R 15229628 15229791 + 16 NA exon (FBgn0034435, exon 1 of 7) protein_coding-exon (FBgn0034435, exon 1 of 7) 395 FBgn0034435 FBgn0034435 FBtr0304055 CG9975 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4330 chr2R 4724192 4724337 + 16 NA intron (FBgn0024189, intron 18 of 21) protein_coding-intron (FBgn0024189, intron 17 of 20) 10368 FBgn0050350 FBgn0050350 FBtr0088636 CG30350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4827 chr2R 8427595 8427726 + 16 NA intron (FBgn0011592, intron 1 of 9) protein_coding-intron (FBgn0011592, intron 1 of 9) -5534 FBgn0053752 FBgn0053752 FBtr0091753 CG33752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7267 chr3L 6991810 6991903 + 16 NA promoter-TSS (FBgn0260660) protein_coding-promoter-TSS (FBgn0260660) -87 FBgn0260660 FBgn0260660 FBtr0308094 mp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9751 chr3R 6751954 6752156 + 16 NA Intergenic Intergenic -23951 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4552 chr2R 6258755 6258955 + 16 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 8759 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9532 chr3R 4797536 4797830 + 16 NA Intergenic Intergenic -8901 FBgn0037646 FBgn0037646 FBtr0081958 CAHbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_199 chr2L 1286847 1286938 + 16 NA exon (FBgn0041097, exon 7 of 12) protein_coding-exon (FBgn0041097, exon 7 of 12) 30466 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11151 chr3R 16713541 16713722 + 16 NA Intergenic Intergenic -2789 FBgn0051480 FBgn0051480 FBtr0083975 tRNA:CR31480 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7264 chr3L 6986399 6986467 + 16 NA exon (FBgn0045759, exon 3 of 4) protein_coding-exon (FBgn0045759, exon 3 of 4) 2711 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3959 chr2R 844677 844835 + 16 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 7584 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9847 chr3R 7553342 7553422 + 16 NA exon (FBgn0037941, exon 2 of 8) protein_coding-exon (FBgn0037941, exon 2 of 8) 5856 FBgn0037941 FBgn0037941 FBtr0082429 CG12594 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10171 chr3R 10077484 10077543 + 16 NA exon (FBgn0027083, exon 6 of 6) protein_coding-exon (FBgn0027083, exon 6 of 6) -4175 FBgn0262808 FBgn0262808 FBtr0306052 CG43179 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5936 chr2R 18044178 18044359 + 16 NA intron (FBgn0000008, intron 3 of 9) protein_coding-intron (FBgn0000008, intron 3 of 9) 7831 FBgn0085235 FBgn0085235 FBtr0112399 CG34206 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11048 chr3R 16011124 16011336 + 16 NA Intergenic Intergenic 16072 FBgn0038774 FBgn0038774 FBtr0083866 CG5023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_405 chr2L 2544326 2544382 + 16 NA Intergenic Intergenic 8490 FBgn0031431 FBgn0031431 FBtr0077750 CG3515 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1721 chr2L 12816828 12816974 + 16 NA TTS (FBgn0015399) protein_coding-TTS (FBgn0015399) 5886 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10815 chr3R 14447213 14447413 + 16 NA promoter-TSS (FBgn0038629) protein_coding-promoter-TSS (FBgn0038629) -276 FBgn0038629 FBgn0038629 FBtr0114497 CG14304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7323 chr3L 7553210 7553333 + 16 NA promoter-TSS (FBgn0035797) protein_coding-promoter-TSS (FBgn0035797) -134 FBgn0035797 FBgn0035797 FBtr0290223 CG14837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_946 chr2L 6973849 6974062 + 16 NA exon (FBgn0031879, exon 11 of 12) protein_coding-exon (FBgn0031879, exon 11 of 12) 1712 FBgn0262616 FBgn0262616 FBtr0305347 CR43142 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_248 chr2L 1409602 1409758 + 16 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 10769 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1925 chr2L 14308248 14308400 + 16 NA exon (FBgn0261563, exon 2 of 14) protein_coding-exon (FBgn0261563, exon 2 of 14) -12930 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8788 chr3L 23807938 23808105 + 16 NA Intergenic Intergenic 30690 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12833 chr3RHet 420162 420270 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7048 chr3L 4466157 4466323 + 16 NA exon (FBgn0052241, exon 2 of 2) protein_coding-exon (FBgn0052241, exon 2 of 2) 390 FBgn0052241 FBgn0052241 FBtr0303006 CG32241 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9246 chr3R 2679569 2679683 + 16 NA Intergenic Intergenic -3923 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7371 chr3L 8156872 8157089 + 16 NA intron (FBgn0035845, intron 2 of 3) protein_coding-intron (FBgn0035845, intron 1 of 2) 1638 FBgn0035845 FBgn0035845 FBtr0300119 CG13675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3088 chr2L 19744883 19745249 + 16 NA exon (FBgn0032817, exon 7 of 8) protein_coding-exon (FBgn0032817, exon 7 of 8) 9024 FBgn0032816 FBgn0032816 FBtr0081289 Nf-YB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8035 chr3L 14280590 14280775 + 16 NA intron (FBgn0001085, intron 1 of 4) protein_coding-intron (FBgn0001085, intron 1 of 4) 13239 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8351 chr3L 17194296 17194399 + 16 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 34384 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2686 chr2L 17434273 17434354 + 16 NA exon (FBgn0032636, exon 2 of 4) protein_coding-exon (FBgn0032636, exon 2 of 4) 451 FBgn0032636 FBgn0032636 FBtr0080980 CG5043 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4011 chr2R 1638948 1639002 + 16 NA Intergenic Intergenic -3058 FBgn0022288 FBgn0022288 FBtr0086043 l(2)09851 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3124 chr2L 19917021 19917293 + 16 NA intron (FBgn0263873, intron 6 of 15) protein_coding-intron (FBgn0263873, intron 7 of 15) -2688 FBgn0264376 FBgn0264376 FBtr0332238 CR43828 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12009 chr3R 23919917 23919971 + 16 NA Intergenic Intergenic -52658 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_233 chr2L 1388354 1388408 + 16 NA intron (FBgn0002543, intron 9 of 13) protein_coding-intron (FBgn0002543, intron 9 of 13) 20292 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12494 chr3R 25917776 25917830 + 16 NA intron (FBgn0015542, intron 7 of 7) protein_coding-intron (FBgn0015542, intron 7 of 11) 29395 FBgn0051031 FBgn0051031 FBtr0085566 CG31031 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_41 chr2L 584267 584426 + 16 NA exon (FBgn0010323, exon 3 of 3) protein_coding-exon (FBgn0010323, exon 3 of 3) 6860 FBgn0023489 FBgn0023489 FBtr0078070 Pph13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4321 chr2R 4685766 4685939 + 16 NA promoter-TSS (FBgn0024189) protein_coding-promoter-TSS (FBgn0024189) -170 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6616 chr2RHet 2216355 2216576 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13648 chrX 10639050 10639105 + 16 NA promoter-TSS (FBgn0052676) protein_coding-promoter-TSS (FBgn0052676) -139 FBgn0052676 FBgn0052676 FBtr0071503 CG32676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6230 chr2R 20520641 20520695 + 16 NA promoter-TSS (FBgn0264328) ncRNA-promoter-TSS (FBgn0264328) -213 FBgn0264328 FBgn0264328 FBtr0331957 CR43787 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8411 chr3L 17590669 17590732 + 16 NA exon (FBgn0000567, exon 5 of 8) protein_coding-exon (FBgn0000567, exon 5 of 8) 21725 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11556 chr3R 21972362 21972495 + 16 NA Intergenic Intergenic 13552 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3465 chr2L 21783255 21783467 + 16 NA exon (FBgn0032964, exon 1 of 1) protein_coding-exon (FBgn0032964, exon 1 of 1) 704 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3037 chr2L 19481426 19481580 + 16 NA TTS (FBgn0032787) protein_coding-TTS (FBgn0032787) 3202 FBgn0032787 FBgn0032787 FBtr0302930 CG10195 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3429 chr2L 21701130 21701184 + 16 NA exon (FBgn0051619, exon 5 of 19) protein_coding-exon (FBgn0051619, exon 5 of 19) 16975 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5235 chr2R 11855553 11855619 + 16 NA exon (FBgn0013988, exon 7 of 14) protein_coding-exon (FBgn0013988, exon 7 of 14) 13039 FBgn0034054 FBgn0034054 FBtr0087201 CG8366 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7474 chr3L 9035535 9035729 + 16 NA intron (FBgn0028789, intron 2 of 4) protein_coding-intron (FBgn0028789, intron 2 of 4) 703 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8908 chr3LHet 1611562 1611810 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7438 chr3L 8738499 8738711 + 16 NA promoter-TSS (FBgn0003149) protein_coding-promoter-TSS (FBgn0003149) 4221 FBgn0040828 FBgn0040828 FBtr0076592 CG13306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12133 chr3R 24379872 24380051 + 16 NA Intergenic Intergenic -9437 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6641 chr2RHet 2275232 2275810 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3248 chr2L 20569335 20569485 + 16 NA Intergenic Intergenic 6986 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4355 chr2R 4884179 4884318 + 16 NA exon (FBgn0085379, exon 4 of 9) protein_coding-exon (FBgn0085379, exon 4 of 9) 9844 FBgn0085379 FBgn0085379 FBtr0112560 CG34350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6470 chr2RHet 1446890 1447008 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6099 chr2R 19461371 19461500 + 16 NA intron (FBgn0015903, intron 1 of 4) protein_coding-intron (FBgn0015903, intron 1 of 4) 9883 FBgn0050184 FBgn0050184 FBtr0072065 CG30184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6477 chr2RHet 1453109 1453163 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1476 chr2L 10867935 10868016 + 16 NA Intergenic Intergenic -2192 FBgn0032311 FBgn0032311 FBtr0080144 CG12517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2129 chr2L 14942844 14943036 + 16 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 18205 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13023 chr4 1112621 1112675 + 16 NA intron (FBgn0005561, intron 1 of 12) protein_coding-intron (FBgn0005561, intron 1 of 12) -6365 FBgn0005561 FBgn0005561 FBtr0301563 sv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9187 chr3R 2353938 2354097 + 16 NA exon (FBgn0037449, exon 1 of 1) protein_coding-exon (FBgn0037449, exon 1 of 1) 766 FBgn0037449 FBgn0037449 FBtr0081675 CG15185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1880 chr2L 14062905 14063025 + 16 NA intron (FBgn0028875, intron 4 of 13) protein_coding-intron (FBgn0028875, intron 4 of 13) 15383 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_38 chr2L 531712 531803 + 16 NA intron (FBgn0003963, intron 3 of 8) protein_coding-intron (FBgn0003963, intron 2 of 7) 10823 FBgn0010602 FBgn0010602 FBtr0310029 lwr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2909 chr2L 18589260 18589538 + 16 NA Intergenic Intergenic -1498 FBgn0032688 FBgn0032688 FBtr0081070 CG15160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6892 chr3L 2045770 2045882 + 16 NA exon (FBgn0086906, exon 32 of 41) protein_coding-exon (FBgn0086906, exon 32 of 41) -7602 FBgn0259701 FBgn0259701 FBtr0309792 CG42355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6857 chr3L 1692481 1692555 + 16 NA intron (FBgn0035260, intron 1 of 3) protein_coding-intron (FBgn0035260, intron 1 of 3) -2099 FBgn0035257 FBgn0035257 FBtr0072764 CG12011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_859 chr2L 6194930 6195143 + 16 NA intron (FBgn0085409, intron 3 of 12) protein_coding-intron (FBgn0085409, intron 3 of 12) 15903 FBgn0085409 FBgn0085409 FBtr0112617 CG34380 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1254 chr2L 8878412 8878706 + 16 NA Intergenic Intergenic 11792 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6062 chr2R 19129376 19129515 + 16 NA Intergenic Intergenic 3473 FBgn0040063 FBgn0040063 FBtr0072050 yip3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10237 chr3R 10695443 10695561 + 16 NA Intergenic Intergenic -9661 FBgn0038268 FBgn0038268 FBtr0082997 CG3631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_996 chr2L 7390421 7390593 + 16 NA TTS (FBgn0031906) protein_coding-TTS (FBgn0031906) 1970 FBgn0031905 FBgn0031905 FBtr0079438 CG5155 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5045 chr2R 10269749 10269942 + 16 NA exon (FBgn0033932, exon 2 of 12) protein_coding-exon (FBgn0033932, exon 2 of 12) 4215 FBgn0033932 FBgn0033932 FBtr0087485 Dh44-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8141 chr3L 15407828 15407917 + 16 NA Intergenic Intergenic 6940 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1608 chr2L 12126148 12126328 + 16 NA exon (FBgn0032414, exon 5 of 6) protein_coding-exon (FBgn0032414, exon 5 of 6) 7129 FBgn0032415 FBgn0032415 FBtr0080360 rho-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12649 chr3R 26989086 26989312 + 16 NA intron (FBgn0086704, intron 6 of 8) protein_coding-intron (FBgn0013973, intron 16 of 16) 5626 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12563 chr3R 26685354 26685512 + 16 NA Intergenic Intergenic 7396 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9942 chr3R 8371703 8371886 + 16 NA intron (FBgn0250910, intron 2 of 7) protein_coding-intron (FBgn0250910, intron 2 of 9) 2157 FBgn0250910 FBgn0250910 FBtr0308597 Octbeta3R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5503 chr2R 14386880 14386976 + 16 NA Intergenic Intergenic -1432 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3017 chr2L 19325158 19325328 + 16 NA Intergenic Intergenic 24937 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2268 chr2L 15487271 15487539 + 16 NA Intergenic Intergenic 2637 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12936 chr4 551217 551386 + 16 NA exon (FBgn0004607, exon 7 of 14) protein_coding-exon (FBgn0004607, exon 7 of 14) 27179 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10926 chr3R 15355685 15355766 + 16 NA intron (FBgn0260003, intron 2 of 14) protein_coding-intron (FBgn0260003, intron 22 of 34) -38888 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5327 chr2R 12633179 12633368 + 16 NA promoter-TSS (FBgn0259967) protein_coding-promoter-TSS (FBgn0259967) -664 FBgn0259967 FBgn0259967 FBtr0300312 Sfp53D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7954 chr3L 13724712 13724821 + 16 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 71734 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11972 chr3R 23819190 23819259 + 16 NA Intergenic Intergenic -2751 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11862 chr3R 23300321 23300376 + 16 NA Intergenic Intergenic -4051 FBgn0039519 FBgn0039519 FBtr0085183 Cyp6a18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12134 chr3R 24384416 24384556 + 16 NA Intergenic Intergenic -13962 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7657 chr3L 11445579 11445691 + 16 NA Intergenic Intergenic 5935 FBgn0036160 FBgn0036160 FBtr0076178 CG12289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10568 chr3R 12781368 12781451 + 16 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -19517 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3688 chr2L 22325080 22325134 + 16 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -15515 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12399 chr3R 25514986 25515040 + 16 NA promoter-TSS (FBgn0039682) protein_coding-promoter-TSS (FBgn0039682) 20 FBgn0039682 FBgn0039682 FBtr0085463 Obp99c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5470 chr2R 14120098 14120271 + 16 NA promoter-TSS (FBgn0000658) protein_coding-promoter-TSS (FBgn0000658) -84 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13250 chrU 3896630 3896923 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8897 chr3LHet 1348650 1348889 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10827 chr3R 14514849 14514943 + 16 NA exon (FBgn0038642, exon 4 of 4) protein_coding-exon (FBgn0038642, exon 4 of 4) 3545 FBgn0038642 FBgn0038642 FBtr0083687 Muc91C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13115 chrU 254567 254677 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8383 chr3L 17366582 17366784 + 16 NA exon (FBgn0036715, exon 4 of 9) protein_coding-exon (FBgn0036715, exon 4 of 9) 5947 FBgn0036715 FBgn0036715 FBtr0309231 Cad74A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2721 chr2L 17659310 17659403 + 16 NA exon (FBgn0015609, exon 17 of 22) protein_coding-exon (FBgn0015609, exon 17 of 22) 31497 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4312 chr2R 4645942 4646029 + 16 NA exon (FBgn0027585, exon 7 of 8) protein_coding-exon (FBgn0027585, exon 7 of 8) 21110 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3294 chr2L 20771174 20771887 + 16 NA exon (FBgn0000251, exon 1 of 2) protein_coding-exon (FBgn0000251, exon 1 of 2) 636 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8751 chr3L 23584163 23584321 + 16 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 35217 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10320 chr3R 11393541 11393772 + 16 NA Intergenic Intergenic -15162 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7577 chr3L 10611845 10612033 + 16 NA Intergenic Intergenic 4737 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13683 chrX 12751435 12751649 + 16 NA exon (FBgn0030429, exon 1 of 1) protein_coding-exon (FBgn0030429, exon 1 of 1) 213 FBgn0030429 FBgn0030429 FBtr0073699 CG4661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10633 chr3R 13323000 13323284 + 16 NA exon (FBgn0261046, exon 5 of 35) protein_coding-exon (FBgn0261046, exon 5 of 35) 8247 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3952 chr2R 835023 835194 + 16 NA Intergenic Intergenic -2064 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3616 chr2L 22089545 22089663 + 16 NA Intergenic Intergenic 9932 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9581 chr3R 5144045 5144295 + 16 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -3322 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11469 chr3R 21528180 21528239 + 16 NA intron (FBgn0051092, intron 4 of 6) protein_coding-intron (FBgn0051092, intron 8 of 10) -15117 FBgn0039360 FBgn0039360 FBtr0084931 CLS protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8762 chr3L 23646894 23646958 + 16 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -61465 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3147 chr2L 20050979 20051067 + 16 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 9952 FBgn0014127 FBgn0014127 FBtr0081349 barr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4435 chr2R 5418059 5418139 + 16 NA intron (FBgn0259246, intron 12 of 20) protein_coding-intron (FBgn0259246, intron 13 of 21) 17541 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4365 chr2R 4910571 4910757 + 16 NA exon (FBgn0033365, exon 3 of 9) protein_coding-exon (FBgn0033365, exon 3 of 9) 5304 FBgn0033364 FBgn0033364 FBtr0088660 CG13747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_433 chr2L 2723455 2723648 + 16 NA Intergenic Intergenic -7287 FBgn0031449 FBgn0031449 FBtr0077708 CG31689 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_795 chr2L 5650864 5650918 + 16 NA intron (FBgn0051646, intron 2 of 12) protein_coding-intron (FBgn0051646, intron 2 of 12) 7662 FBgn0051646 FBgn0051646 FBtr0079114 CG31646 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3931 chr2R 619023 619207 + 16 NA promoter-TSS (FBgn0084049) pseudogene-promoter-TSS (FBgn0084049) 96 FBgn0084049 FBgn0084049 FBtr0111304 CR41440 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_8709 chr3L 22840806 22840964 + 16 NA promoter-TSS (FBgn0052460) tRNA-promoter-TSS (FBgn0052460) 11 FBgn0052460 FBgn0052460 FBtr0078580 tRNA:CR32460 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13092 chrU 201366 201420 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9899 chr3R 8011764 8011874 + 16 NA Intergenic Intergenic 8914 FBgn0037994 FBgn0037994 FBtr0082546 CG4810 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2842 chr2L 18092071 18092178 + 16 NA exon (FBgn0032663, exon 1 of 2) protein_coding-exon (FBgn0032663, exon 1 of 2) 114 FBgn0032663 FBgn0032663 FBtr0081045 CG15153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9839 chr3R 7512696 7512958 + 16 NA exon (FBgn0037935, exon 2 of 7) protein_coding-exon (FBgn0037935, exon 2 of 7) 1025 FBgn0037935 FBgn0037935 FBtr0082438 CG6834 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3533 chr2L 21955809 21956172 + 16 NA Intergenic Intergenic 36943 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4357 chr2R 4889889 4890039 + 16 NA intron (FBgn0085379, intron 1 of 8) protein_coding-intron (FBgn0085379, intron 1 of 8) 4128 FBgn0085379 FBgn0085379 FBtr0112560 CG34350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12211 chr3R 24611668 24611944 + 16 NA Intergenic Intergenic -3533 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2701 chr2L 17589280 17589364 + 16 NA promoter-TSS (FBgn0032651) protein_coding-promoter-TSS (FBgn0032651) -818 FBgn0032651 FBgn0032651 FBtr0303253 Oli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8668 chr3L 21898147 21898201 + 16 NA intron (FBgn0262737, intron 2 of 10) protein_coding-intron (FBgn0262737, intron 1 of 8) -18035 FBgn0264470 FBgn0264470 FBtr0332737 CR43878 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10034 chr3R 9012795 9012984 + 16 NA promoter-TSS (FBgn0038123) protein_coding-promoter-TSS (FBgn0038123) -657 FBgn0038123 FBgn0038123 FBtr0082783 CG8508 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10351 chr3R 11576200 11576508 + 16 NA Intergenic Intergenic 5978 FBgn0038355 FBgn0038355 FBtr0083167 CG4520 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6457 chr2RHet 1305405 1305478 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4409 chr2R 5233075 5233358 + 16 NA exon (FBgn0033404, exon 1 of 2) protein_coding-exon (FBgn0033404, exon 1 of 2) 362 FBgn0033404 FBgn0033404 FBtr0088503 Or45a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1514 chr2L 11236599 11236714 + 16 NA exon (FBgn0264442, exon 5 of 9) protein_coding-exon (FBgn0264442, exon 5 of 9) 1805 FBgn0264442 FBgn0264442 FBtr0332559 ab protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5476 chr2R 14136361 14136415 + 16 NA Intergenic Intergenic 16120 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9103 chr3R 1706800 1706991 + 16 NA intron (FBgn0083949, intron 10 of 16) protein_coding-intron (FBgn0083949, intron 10 of 16) -19876 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_743 chr2L 5368391 5368564 + 16 NA Intergenic Intergenic 12597 FBgn0262097 FBgn0262097 FBtr0310549 CG42850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12733 chr3R 27374179 27374242 + 16 NA intron (FBgn0039852, intron 1 of 8) protein_coding-intron (FBgn0039852, intron 1 of 8) 5325 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_146 chr2L 1016256 1016399 + 16 NA exon (FBgn0031294, exon 5 of 11) protein_coding-exon (FBgn0031294, exon 5 of 11) 10563 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2675 chr2L 17358060 17358197 + 16 NA Intergenic Intergenic -3460 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2039 chr2L 14619958 14620112 + 16 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 3766 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9787 chr3R 7012849 7012917 + 16 NA Intergenic Intergenic -8943 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13614 chrX 8671187 8671241 + 16 NA intron (FBgn0026411, intron 3 of 6) protein_coding-intron (FBgn0026411, intron 3 of 6) 8172 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7686 chr3L 11753497 11753691 + 16 NA intron (FBgn0036202, intron 1 of 7) protein_coding-intron (FBgn0036202, intron 1 of 7) 5304 FBgn0036202 FBgn0036202 FBtr0113164 CG6024 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4992 chr2R 9712089 9712143 + 16 NA promoter-TSS (FBgn0033871) protein_coding-promoter-TSS (FBgn0033871) -62 FBgn0000662 FBgn0000662 FBtr0304697 fl(2)d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12521 chr3R 26260604 26260665 + 16 NA TTS (FBgn0039770) protein_coding-TTS (FBgn0039770) 2848 FBgn0039769 FBgn0039769 FBtr0085644 CG15534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3011 chr2L 19312804 19313045 + 16 NA Intergenic Intergenic 12618 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2825 chr2L 18038662 18038862 + 16 NA intron (FBgn0243486, intron 3 of 14) protein_coding-intron (FBgn0243486, intron 3 of 14) 26355 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1230 chr2L 8849415 8849605 + 16 NA Intergenic Intergenic -13266 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1023 chr2L 7906676 7906776 + 16 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -16132 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11728 chr3R 22652935 22653098 + 16 NA intron (FBgn0262473, intron 3 of 4) protein_coding-intron (FBgn0262473, intron 2 of 3) 22782 FBgn0086060 FBgn0086060 FBtr0114336 snoRNA:Me28S-U1554 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6052 chr2R 18998432 18998579 + 16 NA Intergenic Intergenic -5813 FBgn0041236 FBgn0041236 FBtr0071976 Gr59d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_94 chr2L 805481 805684 + 16 NA Intergenic Intergenic -4995 FBgn0051658 FBgn0051658 FBtr0078008 Nnf1b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5942 chr2R 18117058 18117149 + 16 NA Intergenic Intergenic -1379 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13210 chrU 2334444 2334600 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_909 chr2L 6697412 6697466 + 16 NA exon (FBgn0031850, exon 8 of 11) protein_coding-exon (FBgn0031850, exon 8 of 11) -8046 FBgn0031850 FBgn0031850 FBtr0079314 Tsp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12809 chr3R 27793753 27793812 + 16 NA intron (FBgn0011224, intron 2 of 13) protein_coding-intron (FBgn0011224, intron 3 of 13) 13109 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9470 chr3R 4318783 4318858 + 16 NA Intergenic Intergenic -15505 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4828 chr2R 8428889 8429086 + 16 NA intron (FBgn0011592, intron 1 of 9) protein_coding-intron (FBgn0011592, intron 1 of 9) -4207 FBgn0053752 FBgn0053752 FBtr0091753 CG33752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12695 chr3R 27186884 27186980 + 16 NA exon (FBgn0085376, exon 15 of 17) protein_coding-exon (FBgn0085376, exon 15 of 17) -11217 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1076 chr2L 8482108 8482175 + 16 NA promoter-TSS (FBgn0051892) tRNA-promoter-TSS (FBgn0051892) 14 FBgn0051892 FBgn0051892 FBtr0079702 tRNA:CR31892 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9060 chr3R 1323488 1323542 + 16 NA intron (FBgn0051547, intron 2 of 9) protein_coding-intron (FBgn0051547, intron 2 of 9) 1221 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9965 chr3R 8572661 8572859 + 16 NA exon (FBgn0038084, exon 5 of 6) protein_coding-exon (FBgn0038084, exon 5 of 6) -3358 FBgn0038083 FBgn0038083 FBtr0302379 CG5999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1509 chr2L 11203514 11204159 + 16 NA promoter-TSS (FBgn0259822) protein_coding-promoter-TSS (FBgn0259822) 2256 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2634 chr2L 17212264 17212356 + 16 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -27049 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3863 chr2LHet 20843 21161 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6089 chr2R 19335813 19335919 + 16 NA intron (FBgn0264339, intron 1 of 13) protein_coding-intron (FBgn0264339, intron 1 of 13) 4206 FBgn0264339 FBgn0264339 FBtr0331989 CG43795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10209 chr3R 10408854 10408999 + 16 NA exon (FBgn0020299, exon 2 of 7) protein_coding-exon (FBgn0020299, exon 2 of 7) 5985 FBgn0020299 FBgn0020299 FBtr0082959 stumps protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5131 chr2R 10949566 10949669 + 16 NA Intergenic Intergenic -5871 FBgn0053467 FBgn0053467 FBtr0089861 CG33467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3765 chr2L 22592816 22593530 + 16 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 51354 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4748 chr2R 7760228 7760313 + 16 NA exon (FBgn0033661, exon 8 of 13) protein_coding-exon (FBgn0033661, exon 8 of 13) 5822 FBgn0260437 FBgn0260437 FBtr0300860 CR42532 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3683 chr2L 22311370 22311472 + 16 NA promoter-TSS (FBgn0039972) protein_coding-promoter-TSS (FBgn0039972) -29201 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6360 chr2RHet 526486 526884 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5435 chr2R 13834565 13834724 + 16 NA Intergenic Intergenic 9431 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_409 chr2L 2589701 2589798 + 16 NA intron (FBgn0250835, intron 1 of 2) protein_coding-intron (FBgn0250835, intron 1 of 2) 895 FBgn0250835 FBgn0250835 FBtr0113016 CG15394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12665 chr3R 27059658 27059712 + 16 NA exon (FBgn0039833, exon 3 of 6) protein_coding-exon (FBgn0039833, exon 3 of 6) 1318 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10112 chr3R 9592613 9592706 + 16 NA promoter-TSS (FBgn0038180) protein_coding-promoter-TSS (FBgn0038180) -612 FBgn0038180 FBgn0038180 FBtr0082826 Cht5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1939 chr2L 14326724 14326984 + 16 NA TTS (FBgn0261563) protein_coding-TTS (FBgn0261563) -1575 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10611 chr3R 13169750 13170010 + 16 NA intron (FBgn0038498, intron 2 of 6) protein_coding-intron (FBgn0038498, intron 2 of 6) 21959 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13504 chrX 3150082 3150145 + 16 NA promoter-TSS (FBgn0000479) protein_coding-promoter-TSS (FBgn0000479) 6579 FBgn0003374 FBgn0003374 FBtr0070524 Sgs4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5443 chr2R 13895240 13895327 + 16 NA promoter-TSS (FBgn0034286) protein_coding-promoter-TSS (FBgn0034286) 87 FBgn0034286 FBgn0034286 FBtr0300215 dpr13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11731 chr3R 22669178 22669545 + 16 NA intron (FBgn0051072, intron 16 of 17) protein_coding-intron (FBgn0051072, intron 16 of 17) 17732 FBgn0262379 FBgn0262379 FBtr0304222 mir-1012 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6502 chr2RHet 1736572 1737071 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4679 chr2R 7414860 7414950 + 16 NA exon (FBgn0000577, exon 1 of 3) protein_coding-exon (FBgn0000577, exon 1 of 3) 483 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1519 chr2L 11259049 11259198 + 16 NA exon (FBgn0264442, exon 9 of 9) protein_coding-exon (FBgn0264442, exon 9 of 9) 9879 FBgn0040232 FBgn0040232 FBtr0332205 cmet protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1763 chr2L 13042605 13042741 + 16 NA intron (FBgn0262160, intron 2 of 6) protein_coding-intron (FBgn0262160, intron 2 of 6) 17442 FBgn0262160 FBgn0262160 FBtr0089956 CG9932 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7851 chr3L 12989091 12989493 + 16 NA exon (FBgn0036329, exon 1 of 1) protein_coding-exon (FBgn0036329, exon 1 of 1) 1057 FBgn0036329 FBgn0036329 FBtr0075872 CG11262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7445 chr3L 8784059 8784118 + 16 NA exon (FBgn0261259, exon 15 of 17) protein_coding-exon (FBgn0261259, exon 15 of 17) -2443 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12172 chr3R 24541994 24542097 + 16 NA exon (FBgn0027655, exon 15 of 29) protein_coding-exon (FBgn0027655, exon 15 of 29) 20081 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8749 chr3L 23582661 23582735 + 16 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 33673 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12189 chr3R 24579298 24579366 + 16 NA Intergenic Intergenic -2019 FBgn0039596 FBgn0039596 FBtr0085315 CG10000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6827 chr3L 1399478 1399603 + 16 NA exon (FBgn0052320, exon 3 of 9) protein_coding-exon (FBgn0052320, exon 3 of 9) 954 FBgn0052320 FBgn0052320 FBtr0300067 CG32320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10936 chr3R 15417401 15417597 + 16 NA exon (FBgn0260003, exon 31 of 35) protein_coding-exon (FBgn0260003, exon 31 of 35) 5581 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_13513 chrX 3617897 3617998 + 16 NA promoter-TSS (FBgn0086899) protein_coding-promoter-TSS (FBgn0086899) -4282 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3127 chr2L 19934007 19934273 + 16 NA intron (FBgn0263873, intron 12 of 15) protein_coding-intron (FBgn0263873, intron 12 of 15) 11139 FBgn0264375 FBgn0264375 FBtr0332241 CR43827 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1333 chr2L 9343275 9343420 + 16 NA exon (FBgn0032110, exon 1 of 1) protein_coding-exon (FBgn0032110, exon 1 of 1) 515 FBgn0032110 FBgn0032110 FBtr0079803 CG3748 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12852 chr3RHet 906862 906983 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5311 chr2R 12517512 12517580 + 16 NA exon (FBgn0040505, exon 9 of 9) protein_coding-exon (FBgn0040505, exon 9 of 9) 9970 FBgn0040505 FBgn0040505 FBtr0087118 Alk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12679 chr3R 27138661 27138715 + 16 NA intron (FBgn0085376, intron 1 of 7) protein_coding-intron (FBgn0085376, intron 1 of 16) 1792 FBgn0085376 FBgn0085376 FBtr0301051 CG34347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_308 chr2L 1587987 1588241 + 16 NA promoter-TSS (FBgn0031347) protein_coding-promoter-TSS (FBgn0031347) -959 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12572 chr3R 26719931 26720018 + 16 NA exon (FBgn0015032, exon 1 of 8) protein_coding-exon (FBgn0015032, exon 1 of 8) 291 FBgn0015032 FBgn0015032 FBtr0085712 Cyp4c3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4796 chr2R 8112451 8112606 + 16 NA exon (FBgn0033702, exon 2 of 2) protein_coding-exon (FBgn0033702, exon 2 of 2) 4287 FBgn0033702 FBgn0033702 FBtr0114562 CG8854 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2674 chr2L 17357038 17357092 + 16 NA Intergenic Intergenic -2397 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2642 chr2L 17249723 17249877 + 16 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 10441 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8847 chr3LHet 389508 389562 + 16 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10754 chr3R 14094335 14094533 + 16 NA intron (FBgn0038592, intron 1 of 2) protein_coding-intron (FBgn0038592, intron 1 of 2) 924 FBgn0038592 FBgn0038592 FBtr0083571 CG18599 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3277 chr2L 20700225 20700643 + 16 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 13982 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5038 chr2R 10202064 10202252 + 16 NA intron (FBgn0085408, intron 1 of 9) protein_coding-intron (FBgn0085408, intron 1 of 9) -12300 FBgn0033921 FBgn0033921 FBtr0087562 tej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5910 chr2R 17804131 17804334 + 16 NA intron (FBgn0085397, intron 3 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 20136 FBgn0263999 FBgn0263999 FBtr0334012 CG43742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5640 chr2R 15660047 15660125 + 16 NA Intergenic Intergenic -1348 FBgn0034473 FBgn0034473 FBtr0086344 Or56a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12408 chr3R 25521870 25522112 + 16 NA exon (FBgn0039683, exon 4 of 4) protein_coding-exon (FBgn0039683, exon 4 of 4) 3678 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_140 chr2L 992798 992924 + 16 NA Intergenic Intergenic 34029 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8805 chr3L 23957198 23957261 + 16 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 22281 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7469 chr3L 9012459 9012579 + 16 NA promoter-TSS (FBgn0035956) protein_coding-promoter-TSS (FBgn0035956) -173 FBgn0035956 FBgn0035956 FBtr0076547 Doc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4844 chr2R 8655816 8655883 + 16 NA Intergenic Intergenic 6232 FBgn0033774 FBgn0033774 FBtr0087854 CG12374 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1593 chr2L 11918298 11918479 + 16 NA intron (FBgn0259225, intron 2 of 9) protein_coding-intron (FBgn0259225, intron 2 of 9) -16117 FBgn0026392 FBgn0026392 FBtr0080278 Or33a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2891 chr2L 18415738 18415949 + 16 NA Intergenic Intergenic 27385 FBgn0261597 FBgn0261597 FBtr0081090 RpS26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3263 chr2L 20623038 20623092 + 16 NA Intergenic Intergenic -4668 FBgn0262425 FBgn0262425 FBtr0304384 mir-288 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4024 chr2R 1849744 1849889 + 15 NA exon (FBgn0033048, exon 3 of 4) protein_coding-exon (FBgn0033048, exon 3 of 4) 4456 FBgn0033047 FBgn0033047 FBtr0085966 CG7882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3609 chr2L 22079153 22079290 + 15 NA promoter-TSS (FBgn0032971) protein_coding-promoter-TSS (FBgn0032971) -451 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_650 chr2L 4475650 4475718 + 15 NA intron (FBgn0011603, intron 1 of 9) protein_coding-intron (FBgn0011603, intron 1 of 9) 1340 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7374 chr3L 8196148 8196270 + 15 NA promoter-TSS (FBgn0035855) protein_coding-promoter-TSS (FBgn0035855) 317 FBgn0035856 FBgn0035856 FBtr0076697 CG13679 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12655 chr3R 27007890 27008255 + 15 NA exon (FBgn0051004, exon 11 of 16) protein_coding-exon (FBgn0051004, exon 11 of 16) -10874 FBgn0004389 FBgn0004389 FBtr0085754 bnk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12643 chr3R 26981729 26981893 + 15 NA intron (FBgn0013973, intron 15 of 16) protein_coding-intron (FBgn0013973, intron 15 of 16) 13014 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2919 chr2L 18715607 18715842 + 15 NA exon (FBgn0032707, exon 2 of 2) protein_coding-exon (FBgn0032707, exon 2 of 2) -1961 FBgn0032706 FBgn0032706 FBtr0114486 Irk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6413 chr2RHet 824748 824861 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11616 chr3R 22193975 22194163 + 15 NA Intergenic Intergenic 12859 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3844 chr2L 22902735 22902907 + 15 NA intron (FBgn0250907, intron 5 of 8) protein_coding-intron (FBgn0250907, intron 5 of 8) 15739 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9853 chr3R 7595073 7595221 + 15 NA exon (FBgn0086910, exon 3 of 5) protein_coding-exon (FBgn0086910, exon 3 of 5) 8924 FBgn0086910 FBgn0086910 FBtr0082533 l(3)neo38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2373 chr2L 15970615 15970833 + 15 NA Intergenic Intergenic -8292 FBgn0028645 FBgn0028645 FBtr0300615 beat-Ib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1540 chr2L 11440973 11441027 + 15 NA intron (FBgn0261648, intron 1 of 3) protein_coding-intron (FBgn0261648, intron 1 of 3) 4603 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_387 chr2L 2386313 2386367 + 15 NA promoter-TSS (FBgn0031423) protein_coding-promoter-TSS (FBgn0031423) -548 FBgn0031423 FBgn0031423 FBtr0331440 CG3557 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9059 chr3R 1322727 1322781 + 15 NA intron (FBgn0051547, intron 2 of 9) protein_coding-intron (FBgn0051547, intron 2 of 9) 1982 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11401 chr3R 19801019 19801395 + 15 NA exon (FBgn0051140, exon 8 of 17) protein_coding-exon (FBgn0051140, exon 8 of 17) -8018 FBgn0051451 FBgn0051451 FBtr0308922 CR31451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10643 chr3R 13424203 13424260 + 15 NA Intergenic Intergenic 1973 FBgn0040565 FBgn0040565 FBtr0300628 CG7606 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7528 chr3L 10069957 10070294 + 15 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 12375 FBgn0036066 FBgn0036066 FBtr0076316 CG14160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_870 chr2L 6307908 6307962 + 15 NA promoter-TSS (FBgn0260452) protein_coding-promoter-TSS (FBgn0260452) 816 FBgn0264543 FBgn0264543 FBtr0333243 CG43922 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8321 chr3L 16982248 16982302 + 15 NA intron (FBgn0261547, intron 1 of 7) protein_coding-intron (FBgn0261547, intron 1 of 7) 9304 FBgn0262189 FBgn0262189 FBtr0304208 mir-2500 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7777 chr3L 12426863 12427033 + 15 NA Intergenic Intergenic -1180 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8049 chr3L 14435807 14435861 + 15 NA intron (FBgn0087007, intron 1 of 6) protein_coding-intron (FBgn0087007, intron 4 of 8) 32108 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9739 chr3R 6600521 6600599 + 15 NA exon (FBgn0020439, exon 2 of 2) protein_coding-exon (FBgn0020439, exon 2 of 2) 2530 FBgn0020439 FBgn0020439 FBtr0082306 fau protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7727 chr3L 12057985 12058039 + 15 NA promoter-TSS (FBgn0041096) protein_coding-promoter-TSS (FBgn0041096) -53 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9845 chr3R 7541280 7541386 + 15 NA Intergenic Intergenic 3832 FBgn0037940 FBgn0037940 FBtr0082428 CG14720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8240 chr3L 16274323 16274377 + 15 NA TTS (FBgn0040796) protein_coding-TTS (FBgn0040796) 680 FBgn0036592 FBgn0036592 FBtr0075477 CG13049 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8140 chr3L 15401954 15402008 + 15 NA TTS (FBgn0036495) protein_coding-TTS (FBgn0036495) 1049 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4597 chr2R 6675079 6675133 + 15 NA intron (FBgn0053144, intron 1 of 7) protein_coding-intron (FBgn0053144, intron 1 of 7) -3858 FBgn0050018 FBgn0050018 FBtr0304706 mthl13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2277 chr2L 15516018 15516253 + 15 NA Intergenic Intergenic -6303 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5238 chr2R 11925816 11925947 + 15 NA exon (FBgn0034070, exon 2 of 15) protein_coding-exon (FBgn0034070, exon 2 of 15) 6416 FBgn0034070 FBgn0034070 FBtr0087209 SP2353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6532 chr2RHet 1900459 1901056 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6499 chr2RHet 1717524 1717669 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1416 chr2L 10091478 10091558 + 15 NA exon (FBgn0032181, exon 1 of 1) protein_coding-exon (FBgn0032181, exon 1 of 1) 901 FBgn0032181 FBgn0032181 FBtr0079969 CG13133 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2820 chr2L 18022526 18022827 + 15 NA intron (FBgn0243486, intron 1 of 14) protein_coding-intron (FBgn0243486, intron 1 of 14) 10269 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6744 chr3L 622999 623257 + 15 NA promoter-TSS (FBgn0263042) protein_coding-promoter-TSS (FBgn0263042) -812 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9748 chr3R 6734173 6734229 + 15 NA Intergenic Intergenic -14949 FBgn0037855 FBgn0037855 FBtr0302935 CG6621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8274 chr3L 16511573 16511675 + 15 NA exon (FBgn0263131, exon 8 of 31) protein_coding-exon (FBgn0263131, exon 8 of 31) 20873 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8898 chr3LHet 1349095 1349243 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7974 chr3L 13842933 13843095 + 15 NA exon (FBgn0029167, exon 12 of 26) protein_coding-exon (FBgn0029167, exon 12 of 26) 3860 FBgn0029167 FBgn0029167 FBtr0333020 Hml protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11959 chr3R 23697571 23697799 + 15 NA intron (FBgn0039552, intron 2 of 3) protein_coding-intron (FBgn0085382, intron 2 of 11) 427 FBgn0039552 FBgn0039552 FBtr0300050 CG12426 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5588 chr2R 15205084 15205154 + 15 NA exon (FBgn0034434, exon 5 of 10) protein_coding-exon (FBgn0034434, exon 5 of 10) -6922 FBgn0034433 FBgn0034433 FBtr0113098 endoB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9136 chr3R 2028831 2029110 + 15 NA intron (FBgn0037409, intron 1 of 5) protein_coding-intron (FBgn0037409, intron 1 of 5) 4435 FBgn0037409 FBgn0037409 FBtr0078591 Osi24 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9943 chr3R 8378528 8378858 + 15 NA exon (FBgn0038063, exon 6 of 6) protein_coding-exon (FBgn0038063, exon 6 of 6) -1420 FBgn0262383 FBgn0262383 FBtr0304231 mir-284 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1069 chr2L 8335805 8335921 + 15 NA Intergenic Intergenic -2424 FBgn0032023 FBgn0032023 FBtr0079604 CG14274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3435 chr2L 21717052 21717464 + 15 NA exon (FBgn0051619, exon 13 of 19) protein_coding-exon (FBgn0051619, exon 13 of 19) 33076 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5139 chr2R 10994574 10994760 + 15 NA Intergenic Intergenic -8095 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13736 chrX 13908818 13908931 + 15 NA promoter-TSS (FBgn0011952) tRNA-promoter-TSS (FBgn0011952) 27 FBgn0011952 FBgn0011952 FBtr0073857 tRNA:R:12Ee tRNA Nup98-S2-pascual-garcia2017_R1_peak_12867 chr3RHet 1464195 1464249 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2735 chr2L 17725684 17725838 + 15 NA intron (FBgn0015609, intron 2 of 22) protein_coding-intron (FBgn0015609, intron 2 of 21) 21080 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1399 chr2L 9984843 9985116 + 15 NA promoter-TSS (FBgn0040965) protein_coding-promoter-TSS (FBgn0040965) -236 FBgn0040965 FBgn0040965 FBtr0079974 CG13130 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7368 chr3L 8099289 8099416 + 15 NA exon (FBgn0262579, exon 9 of 10) protein_coding-exon (FBgn0262579, exon 9 of 10) -2880 FBgn0028379 FBgn0028379 FBtr0076683 fan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13661 chrX 11710862 11710918 + 15 NA promoter-TSS (FBgn0030336) protein_coding-promoter-TSS (FBgn0030336) -325 FBgn0030336 FBgn0030336 FBtr0073607 CG1578 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3481 chr2L 21834338 21834424 + 15 NA exon (FBgn0003866, exon 2 of 3) protein_coding-exon (FBgn0003866, exon 2 of 3) 5788 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6361 chr2RHet 527084 527290 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5379 chr2R 13261534 13261859 + 15 NA exon (FBgn0261642, exon 8 of 8) protein_coding-exon (FBgn0261642, exon 8 of 8) 17654 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3831 chr2L 22861380 22861538 + 15 NA Intergenic Intergenic -13075 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6389 chr2RHet 635577 635944 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5918 chr2R 17867203 17867274 + 15 NA promoter-TSS (FBgn0041239) protein_coding-promoter-TSS (FBgn0041239) -48 FBgn0041238 FBgn0041238 FBtr0071732 Gr58b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11782 chr3R 23022922 23023017 + 15 NA Intergenic Intergenic -3253 FBgn0004197 FBgn0004197 FBtr0085128 Ser protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6738 chr3L 618769 618855 + 15 NA Intergenic Intergenic -2166 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11965 chr3R 23731512 23731825 + 15 NA promoter-TSS (FBgn0085382) protein_coding-promoter-TSS (FBgn0085382) -103 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7981 chr3L 13884836 13885072 + 15 NA exon (FBgn0264006, exon 2 of 17) protein_coding-exon (FBgn0264006, exon 2 of 17) 10083 FBgn0036382 FBgn0036382 FBtr0075755 CG13737 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7395 chr3L 8361494 8361614 + 15 NA Intergenic Intergenic -3951 FBgn0001253 FBgn0001253 FBtr0076607 ImpE1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_657 chr2L 4502223 4502412 + 15 NA exon (FBgn0053196, exon 62 of 82) protein_coding-exon (FBgn0053196, exon 62 of 82) -25293 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2357 chr2L 15895906 15895995 + 15 NA exon (FBgn0051735, exon 2 of 4) protein_coding-exon (FBgn0051735, exon 2 of 4) 390 FBgn0051735 FBgn0051735 FBtr0305562 CG31735 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6692 chr2RHet 3232477 3233046 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1434 chr2L 10544844 10544949 + 15 NA promoter-TSS (FBgn0051721) protein_coding-promoter-TSS (FBgn0051721) 15 FBgn0051721 FBgn0051721 FBtr0304114 Trim9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_351 chr2L 1964320 1964544 + 15 NA promoter-TSS (FBgn0051942) tRNA-promoter-TSS (FBgn0051942) -994 FBgn0051942 FBgn0051942 FBtr0077812 tRNA:CR31942 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1022 chr2L 7902466 7902520 + 15 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -11899 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6462 chr2RHet 1322532 1322649 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7215 chr3L 6676166 6676354 + 15 NA Intergenic Intergenic 9494 FBgn0035710 FBgn0035710 FBtr0076960 SP1173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7980 chr3L 13884425 13884541 + 15 NA exon (FBgn0264006, exon 2 of 17) protein_coding-exon (FBgn0264006, exon 2 of 17) 9612 FBgn0036382 FBgn0036382 FBtr0075755 CG13737 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1778 chr2L 13253004 13253058 + 15 NA intron (FBgn0051728, intron 1 of 4) protein_coding-intron (FBgn0051728, intron 1 of 4) 1522 FBgn0051728 FBgn0051728 FBtr0305556 CG31728 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2738 chr2L 17746049 17746219 + 15 NA intron (FBgn0015609, intron 3 of 23) protein_coding-intron (FBgn0015609, intron 1 of 21) 6212 FBgn0015609 FBgn0015609 FBtr0100316 CadN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4806 chr2R 8186714 8186844 + 15 NA exon (FBgn0033708, exon 5 of 6) protein_coding-exon (FBgn0033708, exon 5 of 6) 2962 FBgn0033708 FBgn0033708 FBtr0087972 CG8850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1598 chr2L 11948621 11948891 + 15 NA TTS (FBgn0032385) protein_coding-TTS (FBgn0032385) 791 FBgn0032385 FBgn0032385 FBtr0080282 CG16964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1198 chr2L 8792072 8792238 + 15 NA Intergenic Intergenic -9661 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_458 chr2L 3011448 3011502 + 15 NA intron (FBgn0031488, intron 1 of 3) protein_coding-intron (FBgn0031488, intron 1 of 3) 6618 FBgn0031489 FBgn0031489 FBtr0331629 CG17224 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10538 chr3R 12638687 12638741 + 15 NA intron (FBgn0000014, intron 4 of 5) protein_coding-intron (FBgn0000014, intron 5 of 6) 17053 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_958 chr2L 7104910 7105002 + 15 NA intron (FBgn0085407, intron 3 of 4) protein_coding-intron (FBgn0085407, intron 4 of 5) -20322 FBgn0031888 FBgn0031888 FBtr0079423 Pvf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12364 chr3R 25401938 25402289 + 15 NA Intergenic Intergenic 11709 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11289 chr3R 18025721 18026013 + 15 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -11679 FBgn0038934 FBgn0038934 FBtr0305038 Gld2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5534 chr2R 14751124 14751323 + 15 NA promoter-TSS (FBgn0262480) protein_coding-promoter-TSS (FBgn0262480) -274 FBgn0262480 FBgn0262480 FBtr0304818 CG43070 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3243 chr2L 20552381 20552471 + 15 NA Intergenic Intergenic -9998 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2629 chr2L 17202434 17202631 + 15 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 20594 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7430 chr3L 8724769 8724921 + 15 NA promoter-TSS (FBgn0000356) protein_coding-promoter-TSS (FBgn0000356) -199 FBgn0000356 FBgn0000356 FBtr0076574 Cp16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10721 chr3R 13881877 13881989 + 15 NA Intergenic Intergenic -6850 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_557 chr2L 3822602 3822783 + 15 NA Intergenic Intergenic -2988 FBgn0003430 FBgn0003430 FBtr0077499 slp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_833 chr2L 5918476 5918564 + 15 NA exon (FBgn0043362, exon 10 of 18) protein_coding-exon (FBgn0043362, exon 10 of 18) 5133 FBgn0031751 FBgn0031751 FBtr0079152 CG9016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1093 chr2L 8560409 8560502 + 15 NA intron (FBgn0011259, intron 2 of 20) protein_coding-intron (FBgn0011259, intron 2 of 21) -10433 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8946 chr3R 176206 176377 + 15 NA Intergenic Intergenic -3927 FBgn0261434 FBgn0261434 FBtr0078951 hkb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_157 chr2L 1041733 1041973 + 15 NA intron (FBgn0031294, intron 2 of 11) protein_coding-intron (FBgn0031294, intron 1 of 10) 4607 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11149 chr3R 16695104 16695237 + 15 NA Intergenic Intergenic -1588 FBgn0028396 FBgn0028396 FBtr0083971 TotA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6451 chr2RHet 1295501 1295970 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12296 chr3R 25159940 25160059 + 15 NA Intergenic Intergenic -14663 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1956 chr2L 14383952 14384006 + 15 NA Intergenic Intergenic -2809 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4123 chr2R 3186514 3186632 + 15 NA exon (FBgn0003174, exon 6 of 9) protein_coding-exon (FBgn0003174, exon 6 of 9) -12340 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8674 chr3L 22025664 22025756 + 15 NA Intergenic Intergenic -2393 FBgn0004514 FBgn0004514 FBtr0301930 Oct-TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6519 chr2RHet 1875745 1876508 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4717 chr2R 7659608 7659697 + 15 NA intron (FBgn0033652, intron 1 of 3) protein_coding-intron (FBgn0033652, intron 1 of 3) 3694 FBgn0033650 FBgn0033650 FBtr0088029 CG13193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10035 chr3R 9016104 9016353 + 15 NA TTS (FBgn0038124) protein_coding-TTS (FBgn0038124) -1195 FBgn0038125 FBgn0038125 FBtr0082734 CG8141 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6780 chr3L 1068342 1068464 + 15 NA intron (FBgn0004870, intron 1 of 3) protein_coding-intron (FBgn0004870, intron 1 of 3) 32686 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9924 chr3R 8145332 8145500 + 15 NA Intergenic Intergenic 2940 FBgn0051432 FBgn0051432 FBtr0082616 tRNA:CR31432 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3730 chr2L 22484757 22485212 + 15 NA Intergenic Intergenic 12502 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9338 chr3R 3199781 3199835 + 15 NA Intergenic Intergenic -4781 FBgn0015770 FBgn0015770 FBtr0081585 MstProx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9387 chr3R 3683922 3684154 + 15 NA TTS (FBgn0037525) protein_coding-TTS (FBgn0037525) 28417 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8057 chr3L 14484405 14484459 + 15 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) -26493 FBgn0036426 FBgn0036426 FBtr0290282 CG9592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4494 chr2R 5866648 5866819 + 15 NA promoter-TSS (FBgn0000606) protein_coding-promoter-TSS (FBgn0000606) -91 FBgn0000606 FBgn0000606 FBtr0088390 eve protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9262 chr3R 2762409 2762542 + 15 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 2 of 6) -3913 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9179 chr3R 2308554 2308642 + 15 NA promoter-TSS (FBgn0037448) protein_coding-promoter-TSS (FBgn0037448) -4113 FBgn0037448 FBgn0037448 FBtr0308036 CG15186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1078 chr2L 8485312 8485366 + 15 NA promoter-TSS (FBgn0263489) ncRNA-promoter-TSS (FBgn0263489) -386 FBgn0263489 FBgn0263489 FBtr0309788 unsRNA:d-a ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10330 chr3R 11421146 11421261 + 15 NA Intergenic Intergenic -39987 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4376 chr2R 4948560 4948614 + 15 NA exon (FBgn0033369, exon 2 of 2) protein_coding-exon (FBgn0033369, exon 2 of 2) 842 FBgn0033369 FBgn0033369 FBtr0088661 CG8197 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7343 chr3L 7745202 7745444 + 15 NA intron (FBgn0052373, intron 2 of 8) protein_coding-intron (FBgn0052373, intron 1 of 7) -2186 FBgn0035817 FBgn0035817 FBtr0076810 CG7409 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11088 chr3R 16231283 16231373 + 15 NA intron (FBgn0262869, intron 4 of 20) protein_coding-intron (FBgn0262869, intron 3 of 19) 2240 FBgn0038795 FBgn0038795 FBtr0083894 CG4335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5733 chr2R 16360541 16360811 + 15 NA intron (FBgn0086604, intron 17 of 19) protein_coding-intron (FBgn0086604, intron 18 of 20) -30444 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3938 chr2R 762883 762937 + 15 NA Intergenic Intergenic 46185 FBgn0033000 FBgn0033000 FBtr0299923 CG14464 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1125 chr2L 8617064 8617158 + 15 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -2917 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12984 chr4 940663 940826 + 15 NA exon (FBgn0023213, exon 8 of 16) protein_coding-exon (FBgn0023213, exon 8 of 16) 10603 FBgn0023213 FBgn0023213 FBtr0289951 eIF4G protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2384 chr2L 16010404 16010467 + 15 NA intron (FBgn0028644, intron 1 of 7) protein_coding-intron (FBgn0028644, intron 1 of 7) -4156 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13360 chrUextra 11807545 11807699 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12660 chr3R 27029266 27029320 + 15 NA TTS (FBgn0000313) protein_coding-TTS (FBgn0000313) 4691 FBgn0039827 FBgn0039827 FBtr0113311 CG1544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10898 chr3R 15116143 15116213 + 15 NA Intergenic Intergenic 2099 FBgn0263405 FBgn0263405 FBtr0309184 CR43451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1556 chr2L 11587146 11587388 + 15 NA promoter-TSS (FBgn0028412) protein_coding-promoter-TSS (FBgn0028412) -434 FBgn0028412 FBgn0028412 FBtr0305324 Mst33A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6344 chr2RHet 445718 445772 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1313 chr2L 9061621 9061961 + 15 NA intron (FBgn0051708, intron 3 of 9) protein_coding-intron (FBgn0051708, intron 3 of 9) 9371 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13474 chrX 1748051 1748262 + 15 NA TTS (FBgn0261548) protein_coding-TTS (FBgn0261548) 4873 FBgn0026090 FBgn0026090 FBtr0070372 CG14812 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4556 chr2R 6267522 6267862 + 15 NA promoter-TSS (FBgn0033515) protein_coding-promoter-TSS (FBgn0033515) -78 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6557 chr2RHet 1933850 1933904 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6654 chr2RHet 2356801 2357151 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12256 chr3R 24899688 24899827 + 15 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 10207 FBgn0039633 FBgn0039633 FBtr0330300 CG11873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_374 chr2L 2187521 2187684 + 15 NA TTS (FBgn0051946) tRNA-TTS (FBgn0051946) 595 FBgn0051946 FBgn0051946 FBtr0077834 tRNA:CR31946 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10529 chr3R 12602004 12602084 + 15 NA Intergenic Intergenic -9966 FBgn0085056 FBgn0085056 FBtr0113492 tre-1 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5390 chr2R 13387928 13388005 + 15 NA Intergenic Intergenic -2245 FBgn0262720 FBgn0262720 FBtr0305704 CG43164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4745 chr2R 7755954 7756137 + 15 NA TTS (FBgn0260437) pseudogene-TTS (FBgn0260437) 1597 FBgn0260437 FBgn0260437 FBtr0300860 CR42532 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12349 chr3R 25366269 25366323 + 15 NA Intergenic Intergenic 5938 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9378 chr3R 3627640 3627710 + 15 NA TTS (FBgn0037520) protein_coding-TTS (FBgn0037520) 225 FBgn0037519 FBgn0037519 FBtr0081773 CG3014 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11859 chr3R 23282502 23282658 + 15 NA Intergenic Intergenic -7331 FBgn0039518 FBgn0039518 FBtr0085182 CG13978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12164 chr3R 24520373 24520514 + 15 NA exon (FBgn0039594, exon 9 of 10) protein_coding-exon (FBgn0039594, exon 9 of 10) -1521 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7599 chr3L 10713927 10713981 + 15 NA Intergenic Intergenic -23977 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_980 chr2L 7275438 7275630 + 15 NA exon (FBgn0010453, exon 1 of 4) protein_coding-exon (FBgn0010453, exon 1 of 4) 1634 FBgn0010453 FBgn0010453 FBtr0089291 Wnt4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12839 chr3RHet 626656 626736 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6617 chr2RHet 2217132 2217263 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7684 chr3L 11750245 11750370 + 15 NA intron (FBgn0036202, intron 2 of 7) protein_coding-intron (FBgn0036202, intron 2 of 7) 5902 FBgn0041231 FBgn0041231 FBtr0076118 Gr68a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1695 chr2L 12746854 12747128 + 15 NA Intergenic Intergenic 14849 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5446 chr2R 13907867 13908007 + 15 NA TTS (FBgn0034288) protein_coding-TTS (FBgn0034288) 183 FBgn0034289 FBgn0034289 FBtr0089630 CG10910 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11762 chr3R 22867442 22867539 + 15 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -7452 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3837 chr2L 22893585 22893686 + 15 NA exon (FBgn0250907, exon 9 of 9) protein_coding-exon (FBgn0250907, exon 9 of 9) 19101 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8907 chr3LHet 1502629 1502745 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2464 chr2L 16412740 16412943 + 15 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) 5043 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_9110 chr3R 1813141 1813328 + 15 NA Intergenic Intergenic -10695 FBgn0010403 FBgn0010403 FBtr0078655 Os-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12380 chr3R 25466458 25466636 + 15 NA exon (FBgn0015129, exon 3 of 5) protein_coding-exon (FBgn0015129, exon 3 of 5) 19159 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6011 chr2R 18756941 18757137 + 15 NA exon (FBgn0004896, exon 2 of 2) protein_coding-exon (FBgn0004896, exon 2 of 2) -1779 FBgn0034788 FBgn0034788 FBtr0071899 CG13532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13527 chrX 4260383 4260453 + 15 NA promoter-TSS (FBgn0029706) protein_coding-promoter-TSS (FBgn0029706) -34 FBgn0029706 FBgn0029706 FBtr0070652 CG3626 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9468 chr3R 4300338 4300503 + 15 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 2895 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4911 chr2R 9151068 9151446 + 15 NA intron (FBgn0259219, intron 5 of 5) protein_coding-intron (FBgn0259219, intron 4 of 4) 1267 FBgn0259219 FBgn0259219 FBtr0299738 CG42319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8732 chr3L 23442842 23442968 + 15 NA Intergenic Intergenic -106120 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12735 chr3R 27376535 27376700 + 15 NA intron (FBgn0039852, intron 2 of 8) protein_coding-intron (FBgn0039852, intron 2 of 8) 7732 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9786 chr3R 7011940 7011999 + 15 NA Intergenic Intergenic -9857 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9053 chr3R 1265518 1265654 + 15 NA intron (FBgn0037326, intron 3 of 7) protein_coding-intron (FBgn0037326, intron 3 of 7) -12607 FBgn0037325 FBgn0037325 FBtr0078793 CG12147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7771 chr3L 12367476 12367569 + 15 NA exon (FBgn0036279, exon 5 of 17) protein_coding-exon (FBgn0036279, exon 5 of 17) 17022 FBgn0036279 FBgn0036279 FBtr0333841 Ncc69 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6550 chr2RHet 1922270 1922446 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10896 chr3R 15110908 15111079 + 15 NA Intergenic Intergenic -3086 FBgn0263405 FBgn0263405 FBtr0309184 CR43451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2393 chr2L 16034598 16034787 + 15 NA exon (FBgn0028644, exon 5 of 8) protein_coding-exon (FBgn0028644, exon 5 of 8) -9860 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1103 chr2L 8578527 8578777 + 15 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 7764 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3584 chr2L 22040032 22040251 + 15 NA TTS (FBgn0051601) protein_coding-TTS (FBgn0051601) 2281 FBgn0084001 FBgn0084001 FBtr0332199 CG41434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7702 chr3L 11870247 11870326 + 15 NA Intergenic Intergenic -1929 FBgn0036218 FBgn0036218 FBtr0300724 CG14128 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11600 chr3R 22165370 22165555 + 15 NA intron (FBgn0053970, intron 2 of 8) protein_coding-intron (FBgn0053970, intron 2 of 8) 5733 FBgn0039421 FBgn0039421 FBtr0085027 CG6036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2431 chr2L 16184560 16184948 + 15 NA exon (FBgn0001991, exon 29 of 32) protein_coding-exon (FBgn0001991, exon 29 of 32) -5566 FBgn0264350 FBgn0264350 FBtr0332026 CR43806 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9284 chr3R 2864553 2864796 + 15 NA Intergenic Intergenic -13383 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6693 chr2RHet 3235086 3235169 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11388 chr3R 19563171 19563317 + 15 NA intron (FBgn0263782, intron 1 of 5) protein_coding-intron (FBgn0263782, intron 1 of 5) -4513 FBgn0028691 FBgn0028691 FBtr0084470 Rpn9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1181 chr2L 8770571 8770628 + 15 NA exon (FBgn0032067, exon 4 of 5) protein_coding-exon (FBgn0032067, exon 4 of 5) 1745 FBgn0032067 FBgn0032067 FBtr0302992 CG9465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7654 chr3L 11391694 11391778 + 15 NA Intergenic Intergenic 3946 FBgn0036156 FBgn0036156 FBtr0076172 CG11726 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2548 chr2L 16940517 16940571 + 15 NA Intergenic Intergenic 4830 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7775 chr3L 12424139 12424364 + 15 NA intron (FBgn0036285, intron 1 of 5) protein_coding-intron (FBgn0036285, intron 1 of 5) 1517 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_766 chr2L 5479663 5479849 + 15 NA Intergenic Intergenic 18115 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12046 chr3R 24052042 24052245 + 15 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 37201 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6137 chr2R 19674921 19675027 + 15 NA intron (FBgn0034903, intron 2 of 13) protein_coding-intron (FBgn0034903, intron 2 of 13) 3745 FBgn0034904 FBgn0034904 FBtr0072245 CG15800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1609 chr2L 12130928 12131142 + 15 NA exon (FBgn0032415, exon 3 of 4) protein_coding-exon (FBgn0032415, exon 3 of 4) 2332 FBgn0032415 FBgn0032415 FBtr0080360 rho-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5454 chr2R 13956733 13956922 + 15 NA intron (FBgn0085415, intron 1 of 4) protein_coding-intron (FBgn0085415, intron 1 of 4) 6618 FBgn0085415 FBgn0085415 FBtr0112627 CG34386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_948 chr2L 6978030 6978214 + 15 NA exon (FBgn0031879, exon 8 of 12) protein_coding-exon (FBgn0031879, exon 8 of 12) 5879 FBgn0262616 FBgn0262616 FBtr0305347 CR43142 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11882 chr3R 23365118 23365213 + 15 NA Intergenic Intergenic -3054 FBgn0046887 FBgn0046887 FBtr0085186 Gr98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11827 chr3R 23196440 23196533 + 15 NA promoter-TSS (FBgn0263453) ncRNA-promoter-TSS (FBgn0263453) -899 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_24 chr2L 322329 322480 + 15 NA exon (FBgn0053127, exon 1 of 1) protein_coding-exon (FBgn0053127, exon 1 of 1) 303 FBgn0053127 FBgn0053127 FBtr0078052 CG33127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13537 chrX 5017149 5017203 + 15 NA intron (FBgn0086911, intron 2 of 28) protein_coding-intron (FBgn0086911, intron 2 of 29) -8755 FBgn0029745 FBgn0029745 FBtr0070741 CG6789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8368 chr3L 17277023 17277295 + 15 NA Intergenic Intergenic 19643 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8761 chr3L 23644873 23644944 + 15 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -63483 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10226 chr3R 10634151 10634379 + 15 NA exon (FBgn0053555, exon 8 of 12) protein_coding-exon (FBgn0053555, exon 8 of 12) 6770 FBgn0038262 FBgn0038262 FBtr0082993 CG14857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4593 chr2R 6627356 6627431 + 15 NA promoter-TSS (FBgn0024956) protein_coding-promoter-TSS (FBgn0024956) -54 FBgn0024956 FBgn0024956 FBtr0088255 Mat1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_457 chr2L 3005036 3005160 + 15 NA intron (FBgn0031488, intron 1 of 3) protein_coding-intron (FBgn0031488, intron 1 of 3) 5812 FBgn0031488 FBgn0031488 FBtr0077646 CG17265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7285 chr3L 7158927 7159183 + 15 NA exon (FBgn0263218, exon 16 of 21) protein_coding-exon (FBgn0263218, exon 16 of 21) 7855 FBgn0040837 FBgn0040837 FBtr0273402 CG8620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2295 chr2L 15571881 15571948 + 15 NA intron (FBgn0028370, intron 2 of 3) protein_coding-intron (FBgn0028370, intron 2 of 3) 19191 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5325 chr2R 12620717 12620996 + 15 NA Intergenic Intergenic 4499 FBgn0262564 FBgn0262564 FBtr0304892 CG43104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_54 chr2L 706485 706666 + 15 NA exon (FBgn0000497, exon 2 of 12) protein_coding-exon (FBgn0000497, exon 2 of 12) 8393 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8456 chr3L 17980510 17980597 + 15 NA intron (FBgn0000568, intron 4 of 7) protein_coding-intron (FBgn0000568, intron 2 of 5) 15625 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1258 chr2L 8881150 8881591 + 15 NA Intergenic Intergenic -10119 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1450 chr2L 10653934 10654114 + 15 NA exon (FBgn0032276, exon 2 of 2) protein_coding-exon (FBgn0032276, exon 2 of 2) 2046 FBgn0032276 FBgn0032276 FBtr0080103 CG17098 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2873 chr2L 18287472 18287527 + 15 NA Intergenic Intergenic -1815 FBgn0051787 FBgn0051787 FBtr0081055 CG31787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11991 chr3R 23864240 23864294 + 15 NA intron (FBgn0085391, intron 2 of 9) protein_coding-intron (FBgn0085391, intron 2 of 9) 11933 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6967 chr3L 2957446 2957500 + 15 NA exon (FBgn0262593, exon 13 of 13) protein_coding-exon (FBgn0262593, exon 13 of 13) 3576 FBgn0054025 FBgn0054025 FBtr0290083 CG34025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13181 chrU 1663365 1663461 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5013 chr2R 9912244 9912503 + 15 NA intron (FBgn0002643, intron 2 of 5) protein_coding-intron (FBgn0002643, intron 3 of 6) -3750 FBgn0033893 FBgn0033893 FBtr0087599 CG18371 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6395 chr2RHet 701239 701446 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13670 chrX 12598526 12598620 + 15 NA intron (FBgn0263865, intron 7 of 10) protein_coding-intron (FBgn0263865, intron 6 of 9) -1314 FBgn0030417 FBgn0030417 FBtr0073685 CG15725 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2258 chr2L 15467847 15468004 + 15 NA Intergenic Intergenic 10344 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3673 chr2L 22265050 22265242 + 15 NA Intergenic Intergenic 15268 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6107 chr2R 19524826 19525005 + 15 NA intron (FBgn0004795, intron 1 of 11) protein_coding-intron (FBgn0004795, intron 1 of 11) 4780 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5783 chr2R 16838194 16838384 + 15 NA exon (FBgn0053704, exon 2 of 2) protein_coding-exon (FBgn0053704, exon 2 of 2) 682 FBgn0053704 FBgn0053704 FBtr0091692 CG33704 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6335 chr2RHet 398494 398613 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2652 chr2L 17278926 17278984 + 15 NA Intergenic Intergenic -7339 FBgn0032631 FBgn0032631 FBtr0302408 CG15140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5699 chr2R 16064805 16064909 + 15 NA Intergenic Intergenic 31219 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10418 chr3R 11940853 11940990 + 15 NA Intergenic Intergenic -13530 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4129 chr2R 3212087 3212141 + 15 NA exon (FBgn0033159, exon 18 of 24) protein_coding-exon (FBgn0033159, exon 18 of 24) 13201 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2771 chr2L 17841359 17841587 + 15 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 1 of 13) -28801 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3405 chr2L 21398341 21398472 + 15 NA Intergenic Intergenic -5709 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11686 chr3R 22491421 22491613 + 15 NA intron (FBgn0250908, intron 2 of 8) protein_coding-intron (FBgn0250908, intron 2 of 8) 9349 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10810 chr3R 14424034 14424088 + 15 NA promoter-TSS (FBgn0038630) protein_coding-promoter-TSS (FBgn0038630) -417 FBgn0038630 FBgn0038630 FBtr0083636 CG14305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2954 chr2L 19072213 19072426 + 15 NA intron (FBgn0032753, intron 4 of 5) protein_coding-intron (FBgn0032753, intron 4 of 5) 1827 FBgn0032753 FBgn0032753 FBtr0081173 CG17572 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2986 chr2L 19229614 19229668 + 15 NA Intergenic Intergenic 33252 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11525 chr3R 21806709 21806992 + 15 NA exon (FBgn0259146, exon 3 of 3) protein_coding-exon (FBgn0259146, exon 3 of 3) -1885 FBgn0015269 FBgn0015269 FBtr0084952 Nf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12630 chr3R 26940535 26940717 + 15 NA Intergenic Intergenic -5716 FBgn0039818 FBgn0039818 FBtr0085739 CG11318 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8830 chr3L 24180260 24180351 + 15 NA intron (FBgn0011288, intron 4 of 7) protein_coding-intron (FBgn0011288, intron 4 of 7) 112976 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8059 chr3L 14513256 14513429 + 15 NA exon (FBgn0036427, exon 2 of 3) protein_coding-exon (FBgn0036427, exon 2 of 3) 1448 FBgn0036427 FBgn0036427 FBtr0333038 CG4613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13102 chrU 221314 221468 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1280 chr2L 8926162 8926381 + 15 NA exon (FBgn0085427, exon 5 of 11) protein_coding-exon (FBgn0085427, exon 5 of 11) -7792 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5315 chr2R 12567024 12567222 + 15 NA intron (FBgn0050463, intron 2 of 6) protein_coding-intron (FBgn0050463, intron 7 of 11) 4375 FBgn0050463 FBgn0050463 FBtr0113381 CG30463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2050 chr2L 14639003 14639198 + 15 NA intron (FBgn0003016, intron 1 of 9) protein_coding-intron (FBgn0003016, intron 2 of 10) 22831 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4213 chr2R 3900085 3900139 + 15 NA exon (FBgn0033250, exon 2 of 9) protein_coding-exon (FBgn0033250, exon 2 of 9) 1147 FBgn0033250 FBgn0033250 FBtr0304750 CG14762 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4068 chr2R 2664139 2664199 + 15 NA exon (FBgn0085421, exon 1 of 17) protein_coding-exon (FBgn0085421, exon 1 of 17) 4827 FBgn0000473 FBgn0000473 FBtr0086133 Cyp6a2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3048 chr2L 19597796 19597986 + 15 NA intron (FBgn0000464, intron 1 of 17) protein_coding-intron (FBgn0000464, intron 1 of 17) 11268 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8481 chr3L 18146394 18146487 + 15 NA exon (FBgn0036780, exon 3 of 3) protein_coding-exon (FBgn0036780, exon 3 of 3) 4417 FBgn0036780 FBgn0036780 FBtr0075127 CG7330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5364 chr2R 13139238 13139369 + 15 NA intron (FBgn0261642, intron 2 of 9) protein_coding-intron (FBgn0261642, intron 2 of 9) 3306 FBgn0263708 FBgn0263708 FBtr0310349 CR43660 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2913 chr2L 18671486 18671582 + 15 NA promoter-TSS (FBgn0263079) protein_coding-promoter-TSS (FBgn0263079) -347 FBgn0263079 FBgn0263079 FBtr0306921 CG43338 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8323 chr3L 17053850 17053916 + 15 NA exon (FBgn0260943, exon 10 of 10) protein_coding-exon (FBgn0260943, exon 10 of 10) 5170 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6136 chr2R 19666502 19666603 + 15 NA exon (FBgn0034903, exon 4 of 14) protein_coding-exon (FBgn0034903, exon 4 of 14) 12167 FBgn0034904 FBgn0034904 FBtr0072245 CG15800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11592 chr3R 22132205 22132471 + 15 NA Intergenic Intergenic 18659 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8459 chr3L 18015190 18015257 + 15 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -18194 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9716 chr3R 6457983 6458145 + 15 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -24104 FBgn0085333 FBgn0085333 FBtr0112500 CG34304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12272 chr3R 24994657 24994775 + 15 NA exon (FBgn0039645, exon 4 of 6) protein_coding-exon (FBgn0039645, exon 4 of 6) 3201 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_286 chr2L 1510317 1510371 + 15 NA Intergenic Intergenic 7134 FBgn0031345 FBgn0031345 FBtr0077919 CG18132 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3879 chr2LHet 208279 208476 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10507 chr3R 12498080 12498264 + 15 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -16683 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11560 chr3R 21976294 21976514 + 15 NA Intergenic Intergenic 17528 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12636 chr3R 26961938 26962073 + 15 NA intron (FBgn0013973, intron 1 of 16) protein_coding-intron (FBgn0013973, intron 1 of 16) 1891 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12775 chr3R 27644908 27644977 + 15 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -6624 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13357 chrUextra 10241448 10241651 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2163 chr2L 15094687 15095177 + 15 NA exon (FBgn0028879, exon 15 of 17) protein_coding-exon (FBgn0028879, exon 15 of 17) -14473 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13435 chrX 1331762 1331847 + 15 NA exon (FBgn0259108, exon 6 of 8) protein_coding-exon (FBgn0259108, exon 6 of 8) -14932 FBgn0027796 FBgn0027796 FBtr0300224 Gr2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1571 chr2L 11768993 11769094 + 15 NA Intergenic Intergenic -14541 FBgn0259962 FBgn0259962 FBtr0300306 Sfp33A1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7324 chr3L 7553728 7553930 + 15 NA promoter-TSS (FBgn0035797) protein_coding-promoter-TSS (FBgn0035797) -692 FBgn0035797 FBgn0035797 FBtr0290223 CG14837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2382 chr2L 16004711 16004850 + 15 NA promoter-TSS (FBgn0264374) ncRNA-promoter-TSS (FBgn0264374) 455 FBgn0264364 FBgn0264364 FBtr0332229 CG43816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2171 chr2L 15133600 15133798 + 15 NA Intergenic Intergenic -1310 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_625 chr2L 4348089 4348143 + 15 NA Intergenic Intergenic 4380 FBgn0262375 FBgn0262375 FBtr0304206 mir-1005 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1847 chr2L 13921107 13921297 + 15 NA exon (FBgn0028938, exon 3 of 3) protein_coding-exon (FBgn0028938, exon 3 of 3) 2347 FBgn0028938 FBgn0028938 FBtr0302990 CG16886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6259 chr2R 20802100 20802369 + 15 NA exon (FBgn0085434, exon 23 of 28) protein_coding-exon (FBgn0085434, exon 23 of 28) 8885 FBgn0060296 FBgn0060296 FBtr0333814 pain protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8889 chr3LHet 1224868 1224972 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1117 chr2L 8605493 8605807 + 15 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -11161 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10762 chr3R 14164109 14164287 + 15 NA intron (FBgn0038606, intron 3 of 3) protein_coding-intron (FBgn0038606, intron 3 of 3) -9537 FBgn0051235 FBgn0051235 FBtr0083588 CG31235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12476 chr3R 25745766 25746031 + 15 NA exon (FBgn0003861, exon 1 of 14) protein_coding-exon (FBgn0003861, exon 1 of 14) 113 FBgn0003861 FBgn0003861 FBtr0331356 trp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5988 chr2R 18518510 18518657 + 15 NA intron (FBgn0053143, intron 7 of 8) protein_coding-intron (FBgn0053143, intron 6 of 7) 3524 FBgn0053143 FBgn0053143 FBtr0071859 CG33143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_398 chr2L 2484635 2484814 + 15 NA Intergenic Intergenic 5395 FBgn0031429 FBgn0031429 FBtr0077784 CG15393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12604 chr3R 26814608 26814833 + 15 NA TTS (FBgn0051008) protein_coding-TTS (FBgn0051008) 1008 FBgn0051008 FBgn0051008 FBtr0085748 CG31008 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3866 chr2LHet 155140 155240 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10576 chr3R 12837213 12837717 + 15 NA exon (FBgn0038466, exon 5 of 7) protein_coding-exon (FBgn0038466, exon 5 of 7) 2911 FBgn0038466 FBgn0038466 FBtr0305271 CG8907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6555 chr2RHet 1930136 1930591 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5190 chr2R 11474038 11474092 + 15 NA Intergenic Intergenic -12569 FBgn0034033 FBgn0034033 FBtr0087349 CG8204 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1193 chr2L 8786866 8787462 + 15 NA Intergenic Intergenic -4670 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3059 chr2L 19638080 19638134 + 15 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 51484 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8890 chr3LHet 1259685 1259799 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1277 chr2L 8921805 8922035 + 15 NA intron (FBgn0085427, intron 2 of 10) protein_coding-intron (FBgn0085427, intron 2 of 10) -12143 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9205 chr3R 2511827 2511962 + 15 NA promoter-TSS (FBgn0004777) protein_coding-promoter-TSS (FBgn0004777) -556 FBgn0004777 FBgn0004777 FBtr0081689 Ccp84Ag protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6765 chr3L 853349 853403 + 15 NA TTS (FBgn0035169) protein_coding-TTS (FBgn0035169) 2030 FBgn0035169 FBgn0035169 FBtr0072587 CG13890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_177 chr2L 1209637 1209760 + 15 NA Intergenic Intergenic 5457 FBgn0031324 FBgn0031324 FBtr0114498 CG14342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8127 chr3L 15269830 15269924 + 15 NA Intergenic Intergenic -22181 FBgn0036491 FBgn0036491 FBtr0113172 Best4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9519 chr3R 4702502 4702556 + 15 NA intron (FBgn0262614, intron 2 of 13) protein_coding-intron (FBgn0262614, intron 2 of 13) 13874 FBgn0053551 FBgn0053551 FBtr0091521 tRNA:R:85Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_6969 chr3L 3010084 3010138 + 15 NA exon (FBgn0035385, exon 2 of 2) protein_coding-exon (FBgn0035385, exon 2 of 2) 5958 FBgn0052488 FBgn0052488 FBtr0073008 CG32488 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9128 chr3R 1923913 1924008 + 15 NA intron (FBgn0026077, intron 1 of 4) protein_coding-intron (FBgn0026077, intron 1 of 4) 2649 FBgn0026077 FBgn0026077 FBtr0078619 Gasp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3776 chr2L 22612959 22613116 + 15 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 31490 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9202 chr3R 2503384 2503600 + 15 NA exon (FBgn0002522, exon 1 of 3) protein_coding-exon (FBgn0002522, exon 1 of 3) -6680 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8479 chr3L 18128429 18128483 + 15 NA Intergenic Intergenic -2667 FBgn0036778 FBgn0036778 FBtr0075135 Cyp312a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3692 chr2L 22335838 22336041 + 15 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -4683 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_983 chr2L 7303638 7303739 + 15 NA Intergenic Intergenic -3473 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5130 chr2R 10938967 10939119 + 15 NA Intergenic Intergenic -1183 FBgn0263613 FBgn0263613 FBtr0309977 CR43622 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2399 chr2L 16045840 16046039 + 15 NA exon (FBgn0000182, exon 8 of 11) protein_coding-exon (FBgn0000182, exon 8 of 11) 1387 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9168 chr3R 2242422 2242521 + 15 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 9892 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2269 chr2L 15488795 15488887 + 15 NA Intergenic Intergenic 4073 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4768 chr2R 7915446 7915503 + 15 NA promoter-TSS (FBgn0260012) protein_coding-promoter-TSS (FBgn0260012) -10 FBgn0260012 FBgn0260012 FBtr0306062 pds5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9120 chr3R 1884743 1884881 + 15 NA Intergenic Intergenic -1553 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4283 chr2R 4419066 4419214 + 15 NA intron (FBgn0050361, intron 1 of 18) protein_coding-intron (FBgn0050361, intron 1 of 18) 659 FBgn0050361 FBgn0050361 FBtr0088756 mtt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4416 chr2R 5270476 5270589 + 15 NA intron (FBgn0033405, intron 1 of 7) protein_coding-intron (FBgn0033405, intron 1 of 7) 5227 FBgn0033405 FBgn0033405 FBtr0332997 CG13954 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9715 chr3R 6453909 6454043 + 15 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -22584 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1752 chr2L 12981819 12982073 + 15 NA TTS (FBgn0032464) protein_coding-TTS (FBgn0032464) 3160 FBgn0032464 FBgn0032464 FBtr0080421 Vha68-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12395 chr3R 25495406 25495460 + 15 NA promoter-TSS (FBgn0039676) protein_coding-promoter-TSS (FBgn0039676) 562 FBgn0039677 FBgn0039677 FBtr0085449 CG18110 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2667 chr2L 17345438 17345542 + 15 NA Intergenic Intergenic 9178 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8742 chr3L 23525979 23526033 + 15 NA Intergenic Intergenic -23019 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12779 chr3R 27650163 27650526 + 15 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -1222 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13282 chrU 8932311 8932438 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12150 chr3R 24463082 24463136 + 15 NA exon (FBgn0039591, exon 3 of 3) protein_coding-exon (FBgn0039591, exon 3 of 3) 975 FBgn0039591 FBgn0039591 FBtr0085305 CG9988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8638 chr3L 21314666 21314895 + 15 NA promoter-TSS (FBgn0086913) protein_coding-promoter-TSS (FBgn0086913) -701 FBgn0086913 FBgn0086913 FBtr0331795 Rab26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3337 chr2L 21068640 21068841 + 15 NA intron (FBgn0032910, intron 1 of 7) protein_coding-intron (FBgn0032910, intron 1 of 7) 1541 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5299 chr2R 12438307 12438369 + 15 NA Intergenic Intergenic -1427 FBgn0034135 FBgn0034135 FBtr0087097 Syn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7844 chr3L 12927898 12927952 + 15 NA Intergenic Intergenic 19822 FBgn0036325 FBgn0036325 FBtr0075903 CG10752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7387 chr3L 8314024 8314190 + 15 NA exon (FBgn0035873, exon 1 of 2) protein_coding-exon (FBgn0035873, exon 1 of 2) 244 FBgn0035873 FBgn0035873 FBtr0076708 CG13670 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11473 chr3R 21609340 21609488 + 15 NA Intergenic Intergenic 3606 FBgn0039371 FBgn0039371 FBtr0084919 CG4960 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8080 chr3L 14671275 14671375 + 15 NA promoter-TSS (FBgn0036436) protein_coding-promoter-TSS (FBgn0036436) -78 FBgn0036436 FBgn0036436 FBtr0075712 CG4914 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3709 chr2L 22363853 22364273 + 15 NA exon (FBgn0039972, exon 2 of 7) protein_coding-exon (FBgn0039972, exon 2 of 7) 9708 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13252 chrU 4476739 4477152 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6125 chr2R 19608431 19608485 + 15 NA promoter-TSS (FBgn0034898) protein_coding-promoter-TSS (FBgn0034898) -999 FBgn0034898 FBgn0034898 FBtr0072094 CG18128 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4541 chr2R 6233389 6233652 + 15 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 6146 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7206 chr3L 6564034 6564167 + 15 NA exon (FBgn0263973, exon 4 of 7) protein_coding-exon (FBgn0263973, exon 4 of 7) 18479 FBgn0263973 FBgn0263973 FBtr0307514 jv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3151 chr2L 20082759 20083014 + 15 NA exon (FBgn0263773, exon 2 of 2) protein_coding-exon (FBgn0263773, exon 2 of 2) -2690 FBgn0263773 FBgn0263773 FBtr0310558 fok protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10769 chr3R 14184321 14184704 + 15 NA intron (FBgn0038606, intron 1 of 3) protein_coding-intron (FBgn0038606, intron 1 of 3) 2187 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11306 chr3R 18153065 18153119 + 15 NA Intergenic Intergenic -1931 FBgn0038941 FBgn0038941 FBtr0084203 CG7080 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7258 chr3L 6980143 6980279 + 15 NA Intergenic Intergenic -2525 FBgn0250849 FBgn0250849 FBtr0076933 CG32388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1555 chr2L 11584682 11584736 + 15 NA TTS (FBgn0028412) protein_coding-TTS (FBgn0028412) 2124 FBgn0028412 FBgn0028412 FBtr0305324 Mst33A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11621 chr3R 22217331 22217404 + 15 NA Intergenic Intergenic 12011 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8672 chr3L 21975265 21975390 + 15 NA exon (FBgn0037146, exon 12 of 12) protein_coding-exon (FBgn0037146, exon 12 of 12) -2983 FBgn0000045 FBgn0000045 FBtr0334090 Act79B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10420 chr3R 11945785 11946049 + 15 NA Intergenic Intergenic -8534 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1793 chr2L 13357229 13357385 + 15 NA Intergenic Intergenic -2858 FBgn0032506 FBgn0032506 FBtr0302043 CG9395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12518 chr3R 26239125 26239213 + 15 NA Intergenic Intergenic 9524 FBgn0027544 FBgn0027544 FBtr0303200 CG2217 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7140 chr3L 6030974 6031072 + 15 NA exon (FBgn0035663, exon 1 of 1) protein_coding-exon (FBgn0035663, exon 1 of 1) 812 FBgn0035663 FBgn0035663 FBtr0077039 CG6462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12101 chr3R 24267008 24267111 + 15 NA intron (FBgn0039584, intron 1 of 6) protein_coding-intron (FBgn0039584, intron 1 of 6) 23129 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11454 chr3R 20994717 20994888 + 15 NA TTS (FBgn0083946) protein_coding-TTS (FBgn0083946) -15303 FBgn0039286 FBgn0039286 FBtr0330288 dan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_556 chr2L 3814223 3814278 + 15 NA promoter-TSS (FBgn0031573) protein_coding-promoter-TSS (FBgn0031573) -843 FBgn0031573 FBgn0031573 FBtr0077515 CG3407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_618 chr2L 4306318 4306466 + 15 NA TTS (FBgn0010473) protein_coding-TTS (FBgn0010473) -18181 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3721 chr2L 22407369 22407449 + 15 NA Intergenic Intergenic 20916 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_923 chr2L 6801719 6802158 + 15 NA exon (FBgn0031859, exon 3 of 4) protein_coding-exon (FBgn0031859, exon 3 of 4) 851 FBgn0031859 FBgn0031859 FBtr0309815 CG17377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8195 chr3L 16011967 16012045 + 15 NA promoter-TSS (FBgn0264601) protein_coding-promoter-TSS (FBgn0264601) -589 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1342 chr2L 9415236 9415323 + 15 NA promoter-TSS (FBgn0085395) protein_coding-promoter-TSS (FBgn0085395) -123 FBgn0085395 FBgn0085395 FBtr0308029 Shawl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6427 chr2RHet 932237 932321 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13058 chrU 76152 76305 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2075 chr2L 14760268 14760444 + 15 NA promoter-TSS (FBgn0028870) protein_coding-promoter-TSS (FBgn0028870) -411 FBgn0028870 FBgn0028870 FBtr0080670 CG4691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10207 chr3R 10387042 10387147 + 15 NA promoter-TSS (FBgn0038240) protein_coding-promoter-TSS (FBgn0038240) 390 FBgn0038239 FBgn0038239 FBtr0082955 CG14850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1405 chr2L 10021008 10021200 + 15 NA Intergenic Intergenic -3641 FBgn0032175 FBgn0032175 FBtr0273335 CG13131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_566 chr2L 3916865 3917057 + 15 NA exon (FBgn0051774, exon 7 of 9) protein_coding-exon (FBgn0051774, exon 7 of 9) -2673 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4989 chr2R 9687024 9687149 + 15 NA intron (FBgn0033869, intron 2 of 4) protein_coding-intron (FBgn0033869, intron 2 of 4) 4804 FBgn0033869 FBgn0033869 FBtr0087630 Cpr50Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10 chr2L 56156 56261 + 15 NA intron (FBgn0051973, intron 3 of 14) protein_coding-intron (FBgn0051973, intron 2 of 12) 3060 FBgn0051973 FBgn0051973 FBtr0309229 Cda5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3554 chr2L 21980402 21980485 + 15 NA Intergenic Intergenic 12490 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8514 chr3L 18483383 18483437 + 15 NA intron (FBgn0036789, intron 1 of 3) protein_coding-intron (FBgn0036789, intron 1 of 3) 12247 FBgn0036789 FBgn0036789 FBtr0330088 AlCR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10999 chr3R 15745277 15745331 + 15 NA exon (FBgn0038751, exon 5 of 8) protein_coding-exon (FBgn0038751, exon 5 of 8) 1050 FBgn0038751 FBgn0038751 FBtr0083822 CG4770 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4337 chr2R 4751175 4751443 + 15 NA intron (FBgn0011286, intron 2 of 27) protein_coding-intron (FBgn0011286, intron 2 of 26) 3440 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_341 chr2L 1880993 1881107 + 15 NA promoter-TSS (FBgn0051663) protein_coding-promoter-TSS (FBgn0051663) -406 FBgn0051663 FBgn0051663 FBtr0304597 CG31663 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8215 chr3L 16090478 16090533 + 15 NA promoter-TSS (FBgn0036568) protein_coding-promoter-TSS (FBgn0036568) 88 FBgn0036567 FBgn0036567 FBtr0075496 CG13074 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9057 chr3R 1318818 1318926 + 15 NA exon (FBgn0051547, exon 3 of 10) protein_coding-exon (FBgn0051547, exon 3 of 10) 5864 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3282 chr2L 20713617 20713761 + 15 NA exon (FBgn0014859, exon 1 of 5) protein_coding-exon (FBgn0014859, exon 1 of 5) 727 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11471 chr3R 21574777 21574831 + 15 NA exon (FBgn0066101, exon 4 of 12) protein_coding-exon (FBgn0066101, exon 4 of 12) -8617 FBgn0051092 FBgn0051092 FBtr0113387 LpR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9119 chr3R 1880556 1880718 + 15 NA exon (FBgn0037398, exon 4 of 4) protein_coding-exon (FBgn0037398, exon 4 of 4) 2622 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6122 chr2R 19589915 19590011 + 15 NA promoter-TSS (FBgn0013548) protein_coding-promoter-TSS (FBgn0013548) -39 FBgn0013548 FBgn0013548 FBtr0072085 l(2)dtl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_93 chr2L 804693 804945 + 15 NA Intergenic Intergenic -5758 FBgn0051658 FBgn0051658 FBtr0078008 Nnf1b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11122 chr3R 16497518 16497738 + 15 NA exon (FBgn0038819, exon 2 of 2) protein_coding-exon (FBgn0038819, exon 2 of 2) 2335 FBgn0038819 FBgn0038819 FBtr0083919 Cpr92F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1881 chr2L 14064296 14064419 + 15 NA intron (FBgn0028875, intron 4 of 13) protein_coding-intron (FBgn0028875, intron 4 of 13) 16775 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9757 chr3R 6779803 6779929 + 15 NA Intergenic Intergenic 3860 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7243 chr3L 6906391 6906594 + 15 NA exon (FBgn0041194, exon 3 of 3) protein_coding-exon (FBgn0041194, exon 3 of 3) 572 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2787 chr2L 17928802 17929056 + 15 NA Intergenic Intergenic -9798 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11348 chr3R 18958812 18958921 + 15 NA exon (FBgn0004644, exon 2 of 3) protein_coding-exon (FBgn0004644, exon 2 of 3) -5160 FBgn0051457 FBgn0051457 FBtr0084405 CG31457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10487 chr3R 12372325 12372466 + 15 NA intron (FBgn0259244, intron 2 of 15) protein_coding-intron (FBgn0259244, intron 2 of 16) -24842 FBgn0038445 FBgn0038445 FBtr0083301 CG14891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2142 chr2L 14994966 14995038 + 15 NA intron (FBgn0086711, intron 1 of 5) protein_coding-intron (FBgn0086711, intron 1 of 7) 2557 FBgn0086711 FBgn0086711 FBtr0332521 mol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7180 chr3L 6310625 6310711 + 15 NA Intergenic Intergenic -3043 FBgn0041625 FBgn0041625 FBtr0077004 Or65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9637 chr3R 5807427 5807481 + 15 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 4328 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4155 chr2R 3313370 3313481 + 15 NA exon (FBgn0003460, exon 5 of 7) protein_coding-exon (FBgn0003460, exon 5 of 7) 2673 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6804 chr3L 1181027 1181081 + 15 NA Intergenic Intergenic -3778 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8859 chr3LHet 755386 755912 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10678 chr3R 13604591 13604664 + 15 NA exon (FBgn0262562, exon 4 of 17) protein_coding-exon (FBgn0262562, exon 4 of 17) 15669 FBgn0262562 FBgn0262562 FBtr0305013 CG43102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_156 chr2L 1038119 1038353 + 15 NA exon (FBgn0031296, exon 1 of 2) protein_coding-exon (FBgn0031296, exon 1 of 2) 990 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5996 chr2R 18616820 18616937 + 15 NA promoter-TSS (FBgn0028371) protein_coding-promoter-TSS (FBgn0028371) 11086 FBgn0028371 FBgn0028371 FBtr0302117 jbug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7545 chr3L 10190185 10190296 + 15 NA intron (FBgn0000451, intron 1 of 4) protein_coding-intron (FBgn0000451, intron 1 of 7) 4385 FBgn0000451 FBgn0000451 FBtr0301385 ect protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2636 chr2L 17215358 17215559 + 15 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -23901 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9738 chr3R 6594104 6594171 + 15 NA promoter-TSS (FBgn0010421) protein_coding-promoter-TSS (FBgn0010421) -469 FBgn0010421 FBgn0010421 FBtr0082310 TfIIFbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2164 chr2L 15097365 15097419 + 15 NA TTS (FBgn0028879) protein_coding-TTS (FBgn0028879) -12013 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3602 chr2L 22074009 22074094 + 15 NA Intergenic Intergenic 2898 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_888 chr2L 6480849 6480928 + 15 NA promoter-TSS (FBgn0031820) protein_coding-promoter-TSS (FBgn0031820) -68 FBgn0031820 FBgn0031820 FBtr0079260 DLP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5331 chr2R 12652525 12652579 + 15 NA TTS (FBgn0259738) protein_coding-TTS (FBgn0259738) 881 FBgn0259738 FBgn0259738 FBtr0300043 CG42392 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2714 chr2L 17620115 17620233 + 15 NA Intergenic Intergenic 6172 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5975 chr2R 18348425 18348508 + 15 NA Intergenic Intergenic -5528 FBgn0034731 FBgn0034731 FBtr0300683 CG10384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9580 chr3R 5143572 5143638 + 15 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -3887 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12998 chr4 998156 998210 + 15 NA TTS (FBgn0083990) ncRNA-TTS (FBgn0083990) 2389 FBgn0083990 FBgn0083990 FBtr0111046 sphinx ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7563 chr3L 10587475 10587547 + 15 NA TTS (FBgn0052062) protein_coding-TTS (FBgn0052062) 29165 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11573 chr3R 22031399 22031660 + 15 NA Intergenic Intergenic -14602 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2131 chr2L 14957819 14957988 + 15 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 14397 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7693 chr3L 11806436 11806690 + 15 NA intron (FBgn0259140, intron 2 of 16) protein_coding-intron (FBgn0259140, intron 2 of 16) 1292 FBgn0259140 FBgn0259140 FBtr0332131 CG42255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12975 chr4 881674 881797 + 15 NA exon (FBgn0039936, exon 6 of 9) protein_coding-exon (FBgn0039936, exon 6 of 9) 5917 FBgn0039936 FBgn0039936 FBtr0300886 CG11148 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5710 chr2R 16123067 16123181 + 15 NA promoter-TSS (FBgn0034485) protein_coding-promoter-TSS (FBgn0034485) -616 FBgn0034485 FBgn0034485 FBtr0086315 CG11099 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13172 chrU 1398509 1398668 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1326 chr2L 9297812 9297887 + 15 NA Intergenic Intergenic 7158 FBgn0262033 FBgn0262033 FBtr0303929 CG42844 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8104 chr3L 15010467 15010554 + 15 NA exon (FBgn0261090, exon 5 of 8) protein_coding-exon (FBgn0261090, exon 5 of 8) -3348 FBgn0036463 FBgn0036463 FBtr0333876 Reck protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6117 chr2R 19566749 19566837 + 15 NA TTS (FBgn0034886) protein_coding-TTS (FBgn0034886) -2354 FBgn0034887 FBgn0034887 FBtr0114541 St1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9521 chr3R 4727653 4727761 + 15 NA intron (FBgn0262614, intron 1 of 13) protein_coding-intron (FBgn0262614, intron 1 of 13) -33146 FBgn0003015 FBgn0003015 FBtr0081956 osk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1991 chr2L 14453294 14453348 + 15 NA Intergenic Intergenic -2399 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8031 chr3L 14247740 14247912 + 15 NA Intergenic Intergenic 18091 FBgn0036417 FBgn0036417 FBtr0075741 CG7906 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9678 chr3R 6257329 6257507 + 15 NA Intergenic Intergenic -3093 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1689 chr2L 12685439 12685785 + 15 NA exon (FBgn0004394, exon 5 of 5) protein_coding-exon (FBgn0004394, exon 5 of 5) 7006 FBgn0004394 FBgn0004394 FBtr0080393 pdm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2213 chr2L 15283713 15283851 + 15 NA Intergenic Intergenic -1230 FBgn0028853 FBgn0028853 FBtr0080729 CG15263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6084 chr2R 19311804 19311986 + 15 NA intron (FBgn0034861, intron 1 of 3) protein_coding-intron (FBgn0034861, intron 1 of 3) 1525 FBgn0034861 FBgn0034861 FBtr0072024 CG9815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10345 chr3R 11542392 11542476 + 15 NA promoter-TSS (FBgn0051294) protein_coding-promoter-TSS (FBgn0051294) -127 FBgn0051294 FBgn0051294 FBtr0083198 CG31294 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13820 chrX 18907266 18907358 + 15 NA exon (FBgn0264090, exon 6 of 7) protein_coding-exon (FBgn0264090, exon 6 of 7) -37194 FBgn0085358 FBgn0085358 FBtr0112531 Diedel3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11734 chr3R 22681909 22682043 + 15 NA exon (FBgn0051072, exon 10 of 18) protein_coding-exon (FBgn0051072, exon 10 of 18) 5117 FBgn0262379 FBgn0262379 FBtr0304222 mir-1012 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5549 chr2R 14833068 14833272 + 15 NA intron (FBgn0034408, intron 4 of 7) protein_coding-intron (FBgn0034408, intron 4 of 7) 25486 FBgn0014269 FBgn0014269 FBtr0086601 prod protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5915 chr2R 17856566 17856630 + 15 NA exon (FBgn0085398, exon 6 of 10) protein_coding-exon (FBgn0085398, exon 6 of 10) 2187 FBgn0054029 FBgn0054029 FBtr0100084 CG34029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3374 chr2L 21293100 21293389 + 15 NA intron (FBgn0264556, intron 1 of 3) protein_coding-intron (FBgn0264556, intron 1 of 3) -3070 FBgn0264556 FBgn0264556 FBtr0081511 Gr39a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3796 chr2L 22654266 22654368 + 15 NA Intergenic Intergenic -5236 FBgn0058006 FBgn0058006 FBtr0111230 CG40006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3164 chr2L 20171260 20171629 + 15 NA Intergenic Intergenic -36521 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4977 chr2R 9628451 9628601 + 15 NA intron (FBgn0000633, intron 11 of 12) protein_coding-intron (FBgn0000633, intron 11 of 12) -14323 FBgn0033866 FBgn0033866 FBtr0087628 CG6280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_317 chr2L 1618104 1618158 + 15 NA Intergenic Intergenic -3949 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11244 chr3R 17573521 17573667 + 15 NA exon (FBgn0051343, exon 4 of 5) protein_coding-exon (FBgn0051343, exon 4 of 5) -1981 FBgn0051233 FBgn0051233 FBtr0084127 CG31233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1673 chr2L 12630780 12630981 + 15 NA intron (FBgn0032439, intron 2 of 2) protein_coding-intron (FBgn0032439, intron 2 of 2) 12532 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8118 chr3L 15120231 15120290 + 15 NA TTS (FBgn0036482) protein_coding-TTS (FBgn0036482) -1839 FBgn0036481 FBgn0036481 FBtr0333935 CG16959 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1883 chr2L 14097336 14097399 + 15 NA Intergenic Intergenic -7116 FBgn0028904 FBgn0028904 FBtr0080596 CG16879 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_939 chr2L 6896687 6896751 + 15 NA promoter-TSS (FBgn0031866) protein_coding-promoter-TSS (FBgn0031866) -5358 FBgn0262205 FBgn0262205 FBtr0304244 mir-932 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2692 chr2L 17559393 17559765 + 15 NA Intergenic Intergenic -3814 FBgn0032650 FBgn0032650 FBtr0080990 CG7094 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_363 chr2L 2059499 2059611 + 15 NA exon (FBgn0053516, exon 8 of 8) protein_coding-exon (FBgn0053516, exon 8 of 8) 4966 FBgn0026396 FBgn0026396 FBtr0077826 Or22c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5183 chr2R 11376619 11376673 + 15 NA exon (FBgn0034022, exon 3 of 4) protein_coding-exon (FBgn0034022, exon 3 of 4) -6308 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7282 chr3L 7084201 7084287 + 15 NA Intergenic Intergenic -2060 FBgn0035737 FBgn0035737 FBtr0076909 Cpr65Ec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1666 chr2L 12608601 12608803 + 15 NA intron (FBgn0085424, intron 2 of 5) protein_coding-intron (FBgn0085424, intron 2 of 5) -9646 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5600 chr2R 15427840 15427979 + 15 NA intron (FBgn0003435, intron 5 of 9) protein_coding-intron (FBgn0003435, intron 5 of 9) -11667 FBgn0262571 FBgn0262571 FBtr0304898 CG43111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1436 chr2L 10548191 10548303 + 15 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) 3366 FBgn0051721 FBgn0051721 FBtr0304114 Trim9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8596 chr3L 20245663 20245717 + 15 NA intron (FBgn0036960, intron 1 of 2) protein_coding-intron (FBgn0036960, intron 1 of 2) 4508 FBgn0036960 FBgn0036960 FBtr0332772 CG13814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3919 chr2R 419721 419967 + 15 NA Intergenic Intergenic -14337 FBgn0046692 FBgn0046692 FBtr0308810 Stlk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1384 chr2L 9828329 9828393 + 15 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) -19928 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5184 chr2R 11379473 11379651 + 15 NA intron (FBgn0034022, intron 1 of 3) protein_coding-intron (FBgn0034022, intron 1 of 3) 5150 FBgn0034022 FBgn0034022 FBtr0273307 CG12964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3969 chr2R 857533 857712 + 15 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 20450 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10946 chr3R 15437704 15437829 + 15 NA exon (FBgn0038718, exon 5 of 6) protein_coding-exon (FBgn0038718, exon 5 of 6) -1337 FBgn0038719 FBgn0038719 FBtr0083780 CG16727 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1122 chr2L 8614001 8614159 + 15 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -5948 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8520 chr3L 18655738 18655821 + 15 NA exon (FBgn0036801, exon 4 of 9) protein_coding-exon (FBgn0036801, exon 4 of 9) -4682 FBgn0260027 FBgn0260027 FBtr0300582 CG42495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7634 chr3L 11005006 11005225 + 15 NA Intergenic Intergenic -3182 FBgn0013469 FBgn0013469 FBtr0330080 klu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8994 chr3R 760461 760650 + 15 NA exon (FBgn0085335, exon 2 of 2) protein_coding-exon (FBgn0085335, exon 2 of 2) 7912 FBgn0085335 FBgn0085335 FBtr0112502 CG34306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11263 chr3R 17658245 17658484 + 15 NA exon (FBgn0041229, exon 1 of 2) protein_coding-exon (FBgn0041229, exon 1 of 2) 139 FBgn0041229 FBgn0041229 FBtr0084133 Gr93a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4080 chr2R 2738256 2738468 + 15 NA Intergenic Intergenic -11930 FBgn0040674 FBgn0040674 FBtr0086210 CG9445 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7035 chr3L 4307599 4307730 + 15 NA promoter-TSS (FBgn0066365) protein_coding-promoter-TSS (FBgn0066365) -5819 FBgn0052251 FBgn0052251 FBtr0073286 CG32251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2255 chr2L 15442124 15442186 + 15 NA Intergenic Intergenic 8793 FBgn0028892 FBgn0028892 FBtr0080735 CG4161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10927 chr3R 15365759 15365813 + 15 NA intron (FBgn0260003, intron 2 of 14) protein_coding-intron (FBgn0260003, intron 22 of 34) -46132 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_11448 chr3R 20842565 20842619 + 15 NA exon (FBgn0039257, exon 6 of 7) protein_coding-exon (FBgn0039257, exon 6 of 7) -6403 FBgn0039258 FBgn0039258 FBtr0084755 beta4GalT7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1813 chr2L 13491124 13491332 + 15 NA intron (FBgn0263354, intron 2 of 6) protein_coding-intron (FBgn0263354, intron 4 of 8) 29454 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2493 chr2L 16578844 16579048 + 15 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -26999 FBgn0051815 FBgn0051815 FBtr0080870 CG31815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6086 chr2R 19314362 19314460 + 15 NA promoter-TSS (FBgn0034861) protein_coding-promoter-TSS (FBgn0034861) -991 FBgn0034861 FBgn0034861 FBtr0072024 CG9815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2867 chr2L 18269682 18269869 + 15 NA intron (FBgn0261804, intron 2 of 14) protein_coding-intron (FBgn0261804, intron 2 of 14) 5995 FBgn0261804 FBgn0261804 FBtr0303280 CG42750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8584 chr3L 20077968 20078195 + 15 NA intron (FBgn0036934, intron 1 of 2) protein_coding-intron (FBgn0036934, intron 1 of 2) 4026 FBgn0036934 FBgn0036934 FBtr0074871 sNPF-R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4635 chr2R 7152771 7152825 + 15 NA exon (FBgn0033602, exon 1 of 2) protein_coding-exon (FBgn0033602, exon 1 of 2) 167 FBgn0033602 FBgn0033602 FBtr0088114 Cpr47Ee protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7058 chr3L 4683121 4683199 + 15 NA intron (FBgn0262870, intron 1 of 20) protein_coding-intron (FBgn0262870, intron 1 of 20) 4157 FBgn0262870 FBgn0262870 FBtr0306207 axo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1249 chr2L 8871529 8871727 + 15 NA Intergenic Intergenic 4861 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9935 chr3R 8347757 8347929 + 15 NA exon (FBgn0250910, exon 3 of 10) protein_coding-exon (FBgn0250910, exon 3 of 10) -4067 FBgn0028374 FBgn0028374 FBtr0082639 hug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9399 chr3R 3758662 3758754 + 15 NA intron (FBgn0000504, intron 3 of 4) protein_coding-intron (FBgn0000504, intron 3 of 4) 11043 FBgn0261453 FBgn0261453 FBtr0309754 scaRNA:mgU2-41 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_10082 chr3R 9387796 9387940 + 15 NA Intergenic Intergenic -12679 FBgn0264430 FBgn0264430 FBtr0332550 CR43848 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6845 chr3L 1578839 1578935 + 15 NA intron (FBgn0035237, intron 1 of 4) protein_coding-intron (FBgn0035237, intron 1 of 4) 2188 FBgn0035237 FBgn0035237 FBtr0303993 CG13917 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8225 chr3L 16234287 16234363 + 15 NA Intergenic Intergenic 3502 FBgn0263608 FBgn0263608 FBtr0075460 l(3)72Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11479 chr3R 21668048 21668234 + 15 NA exon (FBgn0039378, exon 2 of 2) protein_coding-exon (FBgn0039378, exon 2 of 2) 8872 FBgn0040602 FBgn0040602 FBtr0084913 CG14545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8748 chr3L 23564063 23564335 + 15 NA intron (FBgn0250816, intron 3 of 6) protein_coding-intron (FBgn0250816, intron 3 of 7) 15174 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7532 chr3L 10094954 10095129 + 15 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -1060 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6715 chr3L 414415 414492 + 15 NA Intergenic Intergenic 19453 FBgn0035139 FBgn0035139 FBtr0072566 CG13891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11098 chr3R 16285357 16285488 + 15 NA intron (FBgn0262869, intron 3 of 20) protein_coding-intron (FBgn0262869, intron 3 of 17) 24851 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13809 chrX 18383104 18383158 + 15 NA exon (FBgn0030927, exon 2 of 4) protein_coding-exon (FBgn0030927, exon 2 of 4) 388 FBgn0030927 FBgn0030927 FBtr0074628 CG15046 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8922 chr3LHet 2213493 2213699 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3487 chr2L 21846132 21846459 + 15 NA Intergenic Intergenic 17702 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6504 chr2RHet 1746870 1746924 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7876 chr3L 13152643 13152790 + 15 NA Intergenic Intergenic -14862 FBgn0086916 FBgn0086916 FBtr0334063 snky protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5477 chr2R 14139479 14139606 + 15 NA Intergenic Intergenic 19274 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5862 chr2R 17454054 17454330 + 15 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 9348 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12991 chr4 963493 963821 + 15 NA intron (FBgn0019985, intron 4 of 5) protein_coding-intron (FBgn0019985, intron 4 of 8) 6212 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3991 chr2R 1341162 1341216 + 15 NA exon (FBgn0259247, exon 6 of 6) protein_coding-exon (FBgn0259247, exon 6 of 6) 37332 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7737 chr3L 12159114 12159247 + 15 NA exon (FBgn0036260, exon 4 of 4) protein_coding-exon (FBgn0036260, exon 4 of 4) -2345 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_80 chr2L 761731 761808 + 15 NA exon (FBgn0031275, exon 10 of 10) protein_coding-exon (FBgn0031275, exon 10 of 10) 11160 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10045 chr3R 9116137 9116203 + 15 NA promoter-TSS (FBgn0038133) protein_coding-promoter-TSS (FBgn0038133) -268 FBgn0038133 FBgn0038133 FBtr0082738 Osi22 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9671 chr3R 6147391 6147445 + 15 NA exon (FBgn0037808, exon 15 of 32) protein_coding-exon (FBgn0037808, exon 15 of 32) 9657 FBgn0037808 FBgn0037808 FBtr0331684 Bruce protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2430 chr2L 16168617 16168671 + 15 NA intron (FBgn0001991, intron 1 of 32) protein_coding-intron (FBgn0001991, intron 1 of 31) 2813 FBgn0001991 FBgn0001991 FBtr0332020 Ca-alpha1D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12329 chr3R 25256932 25257103 + 15 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -48403 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6179 chr2R 20214647 20214701 + 15 NA Intergenic Intergenic 7155 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10847 chr3R 14725400 14725596 + 15 NA TTS (FBgn0038655) protein_coding-TTS (FBgn0038655) 353 FBgn0003248 FBgn0003248 FBtr0083697 Rh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2896 chr2L 18474283 18474413 + 15 NA exon (FBgn0032681, exon 7 of 9) protein_coding-exon (FBgn0032681, exon 7 of 9) 2005 FBgn0262456 FBgn0262456 FBtr0304492 mir-125 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13744 chrX 14691435 14691489 + 15 NA exon (FBgn0003301, exon 8 of 18) protein_coding-exon (FBgn0003301, exon 8 of 18) -10878 FBgn0015010 FBgn0015010 FBtr0073937 Ag5r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2528 chr2L 16842933 16843085 + 15 NA TTS (FBgn0032614) protein_coding-TTS (FBgn0032614) 4188 FBgn0032614 FBgn0032614 FBtr0080927 CG13284 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12084 chr3R 24206104 24206220 + 15 NA Intergenic Intergenic 28198 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3433 chr2L 21712923 21712977 + 15 NA exon (FBgn0051619, exon 11 of 19) protein_coding-exon (FBgn0051619, exon 11 of 19) 28768 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9815 chr3R 7201101 7201194 + 15 NA exon (FBgn0004595, exon 4 of 8) protein_coding-exon (FBgn0004595, exon 4 of 8) -22294 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13456 chrX 1466097 1466163 + 15 NA intron (FBgn0025390, intron 3 of 7) protein_coding-intron (FBgn0025390, intron 3 of 7) -13697 FBgn0065095 FBgn0065095 FBtr0091687 snmRNA:400 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_39 chr2L 580440 580551 + 15 NA TTS (FBgn0023489) protein_coding-TTS (FBgn0023489) 3009 FBgn0023489 FBgn0023489 FBtr0078070 Pph13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4145 chr2R 3303250 3303364 + 15 NA Intergenic Intergenic -3230 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6252 chr2R 20743419 20743569 + 15 NA Intergenic Intergenic 6995 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10384 chr3R 11752105 11752164 + 15 NA exon (FBgn0085305, exon 2 of 2) protein_coding-exon (FBgn0085305, exon 2 of 2) 783 FBgn0085305 FBgn0085305 FBtr0112471 CG34276 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4975 chr2R 9609339 9609512 + 15 NA intron (FBgn0000633, intron 9 of 12) protein_coding-intron (FBgn0000633, intron 9 of 12) -28551 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12137 chr3R 24391558 24392065 + 15 NA Intergenic Intergenic 19023 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10375 chr3R 11714770 11715118 + 15 NA TTS (FBgn0038380) protein_coding-TTS (FBgn0038380) 893 FBgn0038380 FBgn0038380 FBtr0083249 CG14877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4534 chr2R 6221157 6221288 + 15 NA exon (FBgn0261698, exon 15 of 29) protein_coding-exon (FBgn0261698, exon 15 of 29) -13217 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2055 chr2L 14662927 14663220 + 15 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 26252 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12342 chr3R 25333668 25333834 + 15 NA Intergenic Intergenic -4232 FBgn0039668 FBgn0039668 FBtr0085431 Trc8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11582 chr3R 22109704 22109800 + 15 NA Intergenic Intergenic 21368 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2926 chr2L 18743209 18743351 + 15 NA Intergenic Intergenic 2922 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8108 chr3L 15033863 15034086 + 15 NA TTS (FBgn0036465) protein_coding-TTS (FBgn0036465) 1696 FBgn0036465 FBgn0036465 FBtr0075669 Rpn12R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5927 chr2R 17944285 17944344 + 15 NA exon (FBgn0034683, exon 1 of 1) protein_coding-exon (FBgn0034683, exon 1 of 1) 872 FBgn0034683 FBgn0034683 FBtr0071805 CG13500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7465 chr3L 9002601 9002774 + 15 NA exon (FBgn0035955, exon 1 of 3) protein_coding-exon (FBgn0035955, exon 1 of 3) 251 FBgn0035955 FBgn0035955 FBtr0333909 CG5194 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13406 chrUextra 26930162 26930216 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11872 chr3R 23336608 23336782 + 15 NA Intergenic Intergenic 6284 FBgn0039522 FBgn0039522 FBtr0085212 CG13972 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6191 chr2R 20252522 20252810 + 15 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) -8920 FBgn0053537 FBgn0053537 FBtr0100849 tRNA:N5:60C tRNA Nup98-S2-pascual-garcia2017_R1_peak_8338 chr3L 17141302 17141404 + 15 NA promoter-TSS (FBgn0260943) protein_coding-promoter-TSS (FBgn0260943) -18610 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10968 chr3R 15576816 15577030 + 15 NA intron (FBgn0024963, intron 1 of 12) protein_coding-intron (FBgn0024963, intron 1 of 11) -6724 FBgn0263499 FBgn0263499 FBtr0309521 CR43488 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8576 chr3L 19786668 19786771 + 15 NA promoter-TSS (FBgn0261283) protein_coding-promoter-TSS (FBgn0261283) -50 FBgn0261688 FBgn0261688 FBtr0302280 Gyc76C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8936 chr3R 1422 1751 + 15 NA exon (FBgn0037213, exon 2 of 4) protein_coding-exon (FBgn0037213, exon 2 of 4) 1232 FBgn0037213 FBgn0037213 FBtr0078962 CG12581 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6690 chr2RHet 3211239 3211346 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4343 chr2R 4773382 4773457 + 15 NA exon (FBgn0011286, exon 27 of 27) protein_coding-exon (FBgn0011286, exon 27 of 27) 5522 FBgn0033337 FBgn0033337 FBtr0330246 CG8272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10417 chr3R 11938311 11938578 + 15 NA Intergenic Intergenic 13506 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4852 chr2R 8689952 8690068 + 15 NA TTS (FBgn0003326) protein_coding-TTS (FBgn0003326) -4172 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10524 chr3R 12575411 12575664 + 15 NA TTS (FBgn0063261) protein_coding-TTS (FBgn0063261) 1519 FBgn0063261 FBgn0063261 FBtr0083345 CG31275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12212 chr3R 24612649 24612807 + 15 NA Intergenic Intergenic -2611 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12099 chr3R 24262620 24262777 + 15 NA intron (FBgn0039584, intron 1 of 6) protein_coding-intron (FBgn0039584, intron 1 of 6) 18768 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1027 chr2L 7917937 7918090 + 15 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -27419 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7915 chr3L 13434797 13434974 + 15 NA promoter-TSS (FBgn0036365) protein_coding-promoter-TSS (FBgn0036365) -809 FBgn0036365 FBgn0036365 FBtr0075852 CG10732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12030 chr3R 24008422 24008634 + 15 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 35926 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3781 chr2L 22617317 22617383 + 15 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 27177 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5429 chr2R 13792474 13792695 + 15 NA intron (FBgn0011589, intron 6 of 16) protein_coding-intron (FBgn0011589, intron 6 of 16) 10001 FBgn0034284 FBgn0034284 FBtr0086803 CG14491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2038 chr2L 14617474 14617616 + 15 NA TTS (FBgn0000055) protein_coding-TTS (FBgn0000055) 1276 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1596 chr2L 11944210 11944264 + 15 NA promoter-TSS (FBgn0005664) protein_coding-promoter-TSS (FBgn0005664) 96 FBgn0005664 FBgn0005664 FBtr0080281 Cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8443 chr3L 17829848 17829978 + 15 NA intron (FBgn0001134, intron 4 of 5) protein_coding-intron (FBgn0001134, intron 4 of 5) -1639 FBgn0052189 FBgn0052189 FBtr0075163 CG32189 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5908 chr2R 17773519 17773644 + 15 NA intron (FBgn0085397, intron 1 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 2764 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8818 chr3L 24116938 24117105 + 15 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 49692 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2105 chr2L 14878612 14878803 + 15 NA TTS (FBgn0013300) protein_coding-TTS (FBgn0013300) -2471 FBgn0032554 FBgn0032554 FBtr0305558 CG15278 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6759 chr3L 697037 697091 + 15 NA intron (FBgn0035157, intron 1 of 1) protein_coding-intron (FBgn0035157, intron 1 of 1) 2080 FBgn0035157 FBgn0035157 FBtr0072606 CG13894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2730 chr2L 17706466 17706520 + 15 NA TTS (FBgn0262876) protein_coding-TTS (FBgn0262876) 1812 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3510 chr2L 21879727 21880018 + 15 NA Intergenic Intergenic -14355 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7511 chr3L 9820549 9820603 + 15 NA exon (FBgn0264489, exon 4 of 8) protein_coding-exon (FBgn0264489, exon 4 of 8) -1946 FBgn0264489 FBgn0264489 FBtr0332835 CG43897 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9304 chr3R 3060583 3060758 + 15 NA intron (FBgn0037487, intron 2 of 5) protein_coding-intron (FBgn0037487, intron 2 of 5) -6812 FBgn0037488 FBgn0037488 FBtr0303218 CG14607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11880 chr3R 23360118 23360185 + 15 NA TTS (FBgn0039523) protein_coding-TTS (FBgn0039523) -8068 FBgn0046887 FBgn0046887 FBtr0085186 Gr98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9904 chr3R 8034161 8034445 + 15 NA exon (FBgn0037996, exon 5 of 5) protein_coding-exon (FBgn0037996, exon 5 of 5) 1776 FBgn0037996 FBgn0037996 FBtr0082625 CG4830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10559 chr3R 12754645 12754769 + 15 NA exon (FBgn0000015, exon 7 of 7) protein_coding-exon (FBgn0000015, exon 7 of 7) 2628 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4334 chr2R 4747094 4747181 + 15 NA promoter-TSS (FBgn0011286) protein_coding-promoter-TSS (FBgn0011286) -732 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3851 chr2L 22909673 22909974 + 15 NA intron (FBgn0250907, intron 2 of 8) protein_coding-intron (FBgn0250907, intron 2 of 8) 8737 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5137 chr2R 10982078 10982274 + 15 NA Intergenic Intergenic -20586 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7083 chr3L 5332680 5332894 + 15 NA Intergenic Intergenic -2397 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_7989 chr3L 13969914 13969968 + 15 NA exon (FBgn0001216, exon 3 of 3) protein_coding-exon (FBgn0001216, exon 3 of 3) 2780 FBgn0001216 FBgn0001216 FBtr0075762 Hsc70-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1058 chr2L 8247244 8247467 + 15 NA exon (FBgn0032010, exon 8 of 14) protein_coding-exon (FBgn0032010, exon 8 of 14) -3352 FBgn0262359 FBgn0262359 FBtr0304640 CG43057 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3423 chr2L 21649090 21649240 + 15 NA Intergenic Intergenic -8391 FBgn0262620 FBgn0262620 FBtr0305481 CG43144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11111 chr3R 16355910 16355964 + 15 NA Intergenic Intergenic 4489 FBgn0262146 FBgn0262146 FBtr0304129 MtnE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2768 chr2L 17838391 17838465 + 15 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 1 of 13) -25756 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10135 chr3R 9708364 9708451 + 15 NA Intergenic Intergenic -7769 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8434 chr3L 17707371 17707605 + 15 NA intron (FBgn0052183, intron 2 of 9) protein_coding-intron (FBgn0052183, intron 2 of 9) 5466 FBgn0261294 FBgn0261294 FBtr0091928 CheB74a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10998 chr3R 15722064 15722394 + 15 NA exon (FBgn0038744, exon 5 of 9) protein_coding-exon (FBgn0038744, exon 5 of 9) 5659 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_384 chr2L 2352831 2352934 + 15 NA exon (FBgn0031414, exon 9 of 14) protein_coding-exon (FBgn0031414, exon 9 of 14) 4474 FBgn0031413 FBgn0031413 FBtr0077799 CG9967 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11713 chr3R 22573232 22573310 + 15 NA Intergenic Intergenic 9923 FBgn0039454 FBgn0039454 FBtr0085043 CG14247 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9080 chr3R 1541601 1541927 + 15 NA exon (FBgn0004878, exon 1 of 4) protein_coding-exon (FBgn0004878, exon 1 of 4) 1258 FBgn0004878 FBgn0004878 FBtr0078725 cas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1320 chr2L 9103495 9103549 + 15 NA Intergenic Intergenic 5895 FBgn0051609 FBgn0051609 FBtr0299873 CG31609 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7642 chr3L 11152031 11152124 + 15 NA exon (FBgn0052082, exon 7 of 12) protein_coding-exon (FBgn0052082, exon 7 of 12) 5824 FBgn0264721 FBgn0264721 FBtr0334097 CR43989 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5444 chr2R 13898265 13898377 + 15 NA Intergenic Intergenic -2951 FBgn0034286 FBgn0034286 FBtr0300215 dpr13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10479 chr3R 12329989 12330052 + 15 NA intron (FBgn0259244, intron 1 of 15) protein_coding-intron (FBgn0259244, intron 1 of 16) 1497 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8446 chr3L 17883449 17883503 + 15 NA exon (FBgn0036768, exon 5 of 6) protein_coding-exon (FBgn0036768, exon 5 of 6) 2671 FBgn0036768 FBgn0036768 FBtr0075143 CG7402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6868 chr3L 1835172 1835263 + 15 NA promoter-TSS (FBgn0035280) protein_coding-promoter-TSS (FBgn0035280) -53 FBgn0035280 FBgn0035280 FBtr0332875 Cpr62Bb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11899 chr3R 23474052 23474363 + 15 NA exon (FBgn0051058, exon 3 of 3) protein_coding-exon (FBgn0051058, exon 3 of 3) 2227 FBgn0051058 FBgn0051058 FBtr0085198 CG31058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3934 chr2R 688030 688261 + 15 NA Intergenic Intergenic -11998 FBgn0250830 FBgn0250830 FBtr0111273 CG12547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5785 chr2R 16854005 16854066 + 15 NA Intergenic Intergenic -5621 FBgn0008636 FBgn0008636 FBtr0071556 hbn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3005 chr2L 19293535 19293714 + 15 NA Intergenic Intergenic 6227 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6449 chr2RHet 1294800 1294895 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7604 chr3L 10720519 10720657 + 15 NA Intergenic Intergenic -30611 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8752 chr3L 23585224 23585414 + 15 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 36294 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9954 chr3R 8464462 8464664 + 15 NA TTS (FBgn0038068) protein_coding-TTS (FBgn0038068) 360 FBgn0038069 FBgn0038069 FBtr0303841 CG11608 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13805 chrX 18248764 18248818 + 15 NA intron (FBgn0030913, intron 2 of 5) protein_coding-intron (FBgn0030913, intron 2 of 5) 1330 FBgn0030913 FBgn0030913 FBtr0074578 CG6123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3210 chr2L 20439272 20439489 + 15 NA promoter-TSS (FBgn0263582) ncRNA-promoter-TSS (FBgn0263582) -1619 FBgn0263582 FBgn0263582 FBtr0309808 CR43607 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13049 chrU 44382 44895 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7071 chr3L 4965769 4965823 + 15 NA intron (FBgn0005775, intron 4 of 7) protein_coding-intron (FBgn0005775, intron 1 of 4) 14973 FBgn0035584 FBgn0035584 FBtr0073374 CG17030 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12145 chr3R 24408907 24409123 + 15 NA exon (FBgn0000659, exon 1 of 1) protein_coding-exon (FBgn0000659, exon 1 of 1) 1819 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12612 chr3R 26848421 26848807 + 15 NA Intergenic Intergenic -6045 FBgn0004573 FBgn0004573 FBtr0085746 5-HT7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4436 chr2R 5420205 5420546 + 15 NA exon (FBgn0259246, exon 15 of 22) protein_coding-exon (FBgn0259246, exon 15 of 22) 15265 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9449 chr3R 4150897 4150955 + 15 NA TTS (FBgn0037577) protein_coding-TTS (FBgn0037577) 869 FBgn0037577 FBgn0037577 FBtr0081837 CG7443 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12463 chr3R 25675576 25675630 + 15 NA exon (FBgn0039709, exon 8 of 12) protein_coding-exon (FBgn0039709, exon 8 of 12) 7588 FBgn0039710 FBgn0039710 FBtr0085527 dgt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10245 chr3R 10792814 10792868 + 15 NA Intergenic Intergenic -47651 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3725 chr2L 22453839 22453940 + 15 NA Intergenic Intergenic 10917 FBgn0040010 FBgn0040010 FBtr0332631 CG17493 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12583 chr3R 26743953 26744127 + 15 NA intron (FBgn0020912, intron 2 of 4) protein_coding-intron (FBgn0020912, intron 2 of 4) 5430 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_392 chr2L 2451683 2451888 + 15 NA exon (FBgn0000490, exon 1 of 3) protein_coding-exon (FBgn0000490, exon 1 of 3) -3254 FBgn0000490 FBgn0000490 FBtr0310007 dpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8865 chr3LHet 875631 875700 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13449 chrX 1399357 1399608 + 15 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 1 of 10) 2360 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5081 chr2R 10566438 10566530 + 15 NA promoter-TSS (FBgn0050480) protein_coding-promoter-TSS (FBgn0050480) -843 FBgn0050480 FBgn0050480 FBtr0087478 CG30480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12087 chr3R 24213517 24213806 + 15 NA Intergenic Intergenic -30269 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5673 chr2R 15886084 15886138 + 15 NA Intergenic Intergenic 1762 FBgn0050212 FBgn0050212 FBtr0086326 tRNA:CR30212 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10957 chr3R 15519990 15520044 + 15 NA intron (FBgn0051216, intron 3 of 6) protein_coding-intron (FBgn0051216, intron 3 of 6) 21632 FBgn0085315 FBgn0085315 FBtr0112482 CG34286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6749 chr3L 626826 627108 + 15 NA Intergenic Intergenic -1503 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8892 chr3LHet 1268551 1268605 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8719 chr3L 23211177 23211264 + 15 NA intron (FBgn0037212, intron 3 of 10) protein_coding-intron (FBgn0037212, intron 3 of 11) 11451 FBgn0037212 FBgn0037212 FBtr0308331 nAcRalpha-80B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8997 chr3R 767284 767364 + 15 NA exon (FBgn0051536, exon 11 of 13) protein_coding-exon (FBgn0051536, exon 11 of 13) 6494 FBgn0004183 FBgn0004183 FBtr0078851 snRNA:U1:82Eb snRNA Nup98-S2-pascual-garcia2017_R1_peak_8423 chr3L 17676092 17676185 + 15 NA exon (FBgn0085280, exon 4 of 4) protein_coding-exon (FBgn0085280, exon 4 of 4) -6977 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7770 chr3L 12365526 12365580 + 15 NA exon (FBgn0036279, exon 13 of 17) protein_coding-exon (FBgn0036279, exon 13 of 17) 18991 FBgn0036279 FBgn0036279 FBtr0333841 Ncc69 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12633 chr3R 26949548 26949740 + 15 NA promoter-TSS (FBgn0261395) protein_coding-promoter-TSS (FBgn0261395) -405 FBgn0261395 FBgn0261395 FBtr0085738 Prosalpha3T protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9720 chr3R 6493154 6493208 + 15 NA Intergenic Intergenic 9711 FBgn0037818 FBgn0037818 FBtr0082323 CG6465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10748 chr3R 14061854 14061940 + 15 NA promoter-TSS (FBgn0011701) protein_coding-promoter-TSS (FBgn0011701) -19 FBgn0011701 FBgn0011701 FBtr0083564 repo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4432 chr2R 5403906 5403960 + 15 NA promoter-TSS (FBgn0259246) protein_coding-promoter-TSS (FBgn0259246) 12640 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13651 chrX 10787276 10787330 + 15 NA Intergenic Intergenic -2346 FBgn0017561 FBgn0017561 FBtr0073404 Ork1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1239 chr2L 8862835 8862921 + 15 NA promoter-TSS (FBgn0052987) protein_coding-promoter-TSS (FBgn0052987) 102 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3256 chr2L 20589895 20590031 + 15 NA Intergenic Intergenic 14233 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2988 chr2L 19240456 19240749 + 15 NA Intergenic Intergenic 22291 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11512 chr3R 21781833 21781895 + 15 NA exon (FBgn0039396, exon 1 of 7) protein_coding-exon (FBgn0039396, exon 1 of 7) 128 FBgn0039396 FBgn0039396 FBtr0304043 CcapR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3240 chr2L 20544573 20544747 + 15 NA Intergenic Intergenic -17764 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_141 chr2L 996225 996454 + 15 NA Intergenic Intergenic 30551 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7516 chr3L 9876092 9876369 + 15 NA exon (FBgn0085411, exon 4 of 4) protein_coding-exon (FBgn0085411, exon 4 of 4) 4145 FBgn0085411 FBgn0085411 FBtr0332687 CG34382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10961 chr3R 15551046 15551582 + 15 NA Intergenic Intergenic -5367 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11974 chr3R 23824071 23824340 + 15 NA Intergenic Intergenic -7732 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4022 chr2R 1830760 1830814 + 15 NA Intergenic Intergenic -14573 FBgn0033047 FBgn0033047 FBtr0085966 CG7882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3054 chr2L 19625568 19625851 + 15 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 39086 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_159 chr2L 1048073 1048199 + 15 NA promoter-TSS (FBgn0031294) protein_coding-promoter-TSS (FBgn0031294) 10890 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10948 chr3R 15443149 15443393 + 15 NA exon (FBgn0038720, exon 6 of 7) protein_coding-exon (FBgn0038720, exon 6 of 7) 3589 FBgn0038720 FBgn0038720 FBtr0083810 CG6231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7468 chr3L 9007671 9007924 + 15 NA intron (FBgn0035956, intron 3 of 4) protein_coding-intron (FBgn0035956, intron 3 of 4) 4549 FBgn0035956 FBgn0035956 FBtr0076547 Doc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1205 chr2L 8802965 8803163 + 15 NA Intergenic Intergenic -6336 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3225 chr2L 20504351 20504608 + 15 NA Intergenic Intergenic 9373 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_633 chr2L 4418008 4418258 + 15 NA TTS (FBgn0051963) tRNA-TTS (FBgn0051963) 915 FBgn0051963 FBgn0051963 FBtr0077458 tRNA:CR31963 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1499 chr2L 11151778 11151832 + 15 NA exon (FBgn0032350, exon 6 of 6) protein_coding-exon (FBgn0032350, exon 6 of 6) -2930 FBgn0010197 FBgn0010197 FBtr0301840 Gyc32E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6748 chr3L 626158 626284 + 15 NA Intergenic Intergenic -2249 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4099 chr2R 2867995 2868175 + 15 NA TTS (FBgn0050156) protein_coding-TTS (FBgn0050156) 2406 FBgn0050156 FBgn0050156 FBtr0086184 CG30156 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12969 chr4 822020 822171 + 15 NA exon (FBgn0039938, exon 3 of 3) protein_coding-exon (FBgn0039938, exon 3 of 3) 2036 FBgn0039939 FBgn0039939 FBtr0089242 CG11231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11693 chr3R 22515480 22515534 + 15 NA Intergenic Intergenic 3738 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7177 chr3L 6292144 6292333 + 15 NA Intergenic Intergenic -21473 FBgn0041625 FBgn0041625 FBtr0077004 Or65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4438 chr2R 5423797 5423851 + 15 NA exon (FBgn0259246, exon 19 of 22) protein_coding-exon (FBgn0259246, exon 19 of 22) 11816 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1857 chr2L 13955294 13955397 + 15 NA exon (FBgn0032536, exon 9 of 9) protein_coding-exon (FBgn0032536, exon 9 of 9) -2194 FBgn0261514 FBgn0261514 FBtr0304720 nimA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_244 chr2L 1405404 1405617 + 15 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 14939 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7274 chr3L 7040883 7040973 + 15 NA promoter-TSS (FBgn0260660) protein_coding-promoter-TSS (FBgn0260660) -18486 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3420 chr2L 21643865 21644125 + 15 NA exon (FBgn0023416, exon 18 of 19) protein_coding-exon (FBgn0023416, exon 18 of 19) 11408 FBgn0023416 FBgn0023416 FBtr0100324 Ac3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12861 chr3RHet 1204842 1204972 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7645 chr3L 11316819 11316962 + 15 NA Intergenic Intergenic -2071 FBgn0036154 FBgn0036154 FBtr0076182 CG6168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9071 chr3R 1364129 1364312 + 15 NA exon (FBgn0010051, exon 19 of 19) protein_coding-exon (FBgn0010051, exon 19 of 19) 9270 FBgn0037336 FBgn0037336 FBtr0078762 CG2519 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_844 chr2L 6019282 6019496 + 15 NA promoter-TSS (FBgn0001170) protein_coding-promoter-TSS (FBgn0001170) 9 FBgn0001170 FBgn0001170 FBtr0079227 H2.0 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9799 chr3R 7131761 7131937 + 15 NA promoter-TSS (FBgn0051386) ncRNA-promoter-TSS (FBgn0051386) -519 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10483 chr3R 12340268 12340466 + 15 NA intron (FBgn0259244, intron 2 of 15) protein_coding-intron (FBgn0259244, intron 2 of 16) 11844 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12044 chr3R 24046489 24046624 + 15 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 42788 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1706 chr2L 12764476 12764756 + 15 NA Intergenic Intergenic -2776 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13304 chrUextra 280277 280519 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9964 chr3R 8570895 8570949 + 15 NA TTS (FBgn0038084) protein_coding-TTS (FBgn0038084) -1520 FBgn0038083 FBgn0038083 FBtr0302379 CG5999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11898 chr3R 23473684 23473738 + 15 NA exon (FBgn0051058, exon 3 of 3) protein_coding-exon (FBgn0051058, exon 3 of 3) 2723 FBgn0051058 FBgn0051058 FBtr0085198 CG31058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8787 chr3L 23807434 23807699 + 15 NA Intergenic Intergenic 30235 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9774 chr3R 6884679 6884806 + 15 NA Intergenic Intergenic -29400 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10950 chr3R 15444229 15444621 + 15 NA exon (FBgn0038720, exon 4 of 7) protein_coding-exon (FBgn0038720, exon 4 of 7) 2435 FBgn0038720 FBgn0038720 FBtr0083810 CG6231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6207 chr2R 20339643 20339821 + 15 NA intron (FBgn0035006, intron 3 of 3) protein_coding-intron (FBgn0035006, intron 3 of 3) 828 FBgn0035006 FBgn0035006 FBtr0072355 CG4563 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12821 chr3RHet 23968 24160 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2243 chr2L 15417640 15417748 + 15 NA Intergenic Intergenic 7891 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3386 chr2L 21365303 21365615 + 15 NA exon (FBgn0023090, exon 5 of 5) protein_coding-exon (FBgn0023090, exon 5 of 5) 4243 FBgn0023090 FBgn0023090 FBtr0081516 dtr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4251 chr2R 4205392 4205460 + 15 NA Intergenic Intergenic -9579 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12229 chr3R 24759259 24759439 + 15 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 10583 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9900 chr3R 8014307 8014660 + 15 NA Intergenic Intergenic 6250 FBgn0037994 FBgn0037994 FBtr0082546 CG4810 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8294 chr3L 16745159 16745302 + 15 NA Intergenic Intergenic -3359 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5925 chr2R 17935508 17935625 + 15 NA Intergenic Intergenic -5179 FBgn0005778 FBgn0005778 FBtr0071806 PpD5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12675 chr3R 27102738 27102882 + 15 NA Intergenic Intergenic 11358 FBgn0039839 FBgn0039839 FBtr0085764 CG15555 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12222 chr3R 24686028 24686082 + 15 NA intron (FBgn0264324, intron 4 of 13) protein_coding-intron (FBgn0264324, intron 4 of 12) -1140 FBgn0028373 FBgn0028373 FBtr0085350 inx3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9991 chr3R 8702237 8702366 + 15 NA Intergenic Intergenic -15416 FBgn0038089 FBgn0038089 FBtr0082683 d-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5475 chr2R 14135897 14136080 + 15 NA Intergenic Intergenic 15720 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6988 chr3L 3275915 3276086 + 15 NA exon (FBgn0035428, exon 3 of 3) protein_coding-exon (FBgn0035428, exon 3 of 3) -4239 FBgn0035429 FBgn0035429 FBtr0308313 CG12017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8198 chr3L 16014127 16014508 + 15 NA exon (FBgn0264600, exon 1 of 1) protein_coding-exon (FBgn0264600, exon 1 of 1) 289 FBgn0264600 FBgn0264600 FBtr0333620 CG43949 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6286 chr2R 21102867 21102940 + 15 NA intron (FBgn0035094, intron 2 of 8) protein_coding-intron (FBgn0035094, intron 2 of 8) -11231 FBgn0001325 FBgn0001325 FBtr0072449 Kr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8930 chr3LHet 2450718 2450838 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2341 chr2L 15850626 15850853 + 15 NA Intergenic Intergenic -1853 FBgn0028903 FBgn0028903 FBtr0080787 CG13243 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5835 chr2R 17297430 17297487 + 15 NA intron (FBgn0010415, intron 2 of 4) protein_coding-intron (FBgn0010415, intron 3 of 5) 7111 FBgn0010415 FBgn0010415 FBtr0301557 Sdc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12352 chr3R 25369005 25369151 + 15 NA Intergenic Intergenic 8720 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8327 chr3L 17069940 17070440 + 15 NA exon (FBgn0260943, exon 10 of 10) protein_coding-exon (FBgn0260943, exon 10 of 10) 21477 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13077 chrU 137092 137462 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11096 chr3R 16269185 16269387 + 15 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 1 of 19) 35299 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3544 chr2L 21970548 21971228 + 15 NA Intergenic Intergenic 22045 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4976 chr2R 9625085 9625203 + 15 NA intron (FBgn0000633, intron 11 of 12) protein_coding-intron (FBgn0000633, intron 11 of 12) -17705 FBgn0033866 FBgn0033866 FBtr0087628 CG6280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6508 chr2RHet 1851221 1851973 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12773 chr3R 27638814 27638868 + 15 NA promoter-TSS (FBgn0024891) protein_coding-promoter-TSS (FBgn0024891) -1001 FBgn0024891 FBgn0024891 FBtr0085851 ferrochelatase protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11853 chr3R 23264662 23264839 + 15 NA Intergenic Intergenic -1284 FBgn0263401 FBgn0263401 FBtr0309178 CG43447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9259 chr3R 2753026 2753101 + 15 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) 5499 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_724 chr2L 5134488 5134574 + 15 NA exon (FBgn0261836, exon 7 of 18) protein_coding-exon (FBgn0261836, exon 7 of 18) -17218 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6439 chr2RHet 1090270 1090469 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2690 chr2L 17541016 17541181 + 15 NA promoter-TSS (FBgn0262996) ncRNA-promoter-TSS (FBgn0262996) -756 FBgn0262996 FBgn0262996 FBtr0306838 CR43304 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1814 chr2L 13492552 13492734 + 15 NA intron (FBgn0263354, intron 2 of 6) protein_coding-intron (FBgn0263354, intron 4 of 8) 30869 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11843 chr3R 23241610 23241781 + 15 NA intron (FBgn0016061, intron 2 of 16) protein_coding-intron (FBgn0016061, intron 2 of 16) 21509 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11514 chr3R 21787021 21787111 + 15 NA promoter-TSS (FBgn0000206) protein_coding-promoter-TSS (FBgn0000206) -650 FBgn0000206 FBgn0000206 FBtr0084949 boss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1795 chr2L 13360028 13360161 + 15 NA exon (FBgn0032507, exon 2 of 2) protein_coding-exon (FBgn0032507, exon 2 of 2) 1433 FBgn0032507 FBgn0032507 FBtr0080474 CG9377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12207 chr3R 24608479 24608730 + 15 NA Intergenic Intergenic -6735 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7866 chr3L 13080731 13080785 + 15 NA promoter-TSS (FBgn0036345) protein_coding-promoter-TSS (FBgn0036345) -369 FBgn0036345 FBgn0036345 FBtr0075892 CG17300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12625 chr3R 26918107 26918225 + 15 NA exon (FBgn0039816, exon 2 of 4) protein_coding-exon (FBgn0039816, exon 2 of 4) 4874 FBgn0039816 FBgn0039816 FBtr0085741 CG11317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4779 chr2R 7971030 7971090 + 15 NA Intergenic Intergenic 2279 FBgn0033680 FBgn0033680 FBtr0087981 CG13186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4286 chr2R 4430505 4430716 + 15 NA Intergenic Intergenic 9148 FBgn0033301 FBgn0033301 FBtr0088736 CG12780 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12454 chr3R 25649549 25649638 + 15 NA exon (FBgn0039704, exon 6 of 8) protein_coding-exon (FBgn0039704, exon 6 of 8) 4759 FBgn0039704 FBgn0039704 FBtr0085486 neo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7148 chr3L 6097833 6097937 + 15 NA intron (FBgn0005658, intron 4 of 9) protein_coding-intron (FBgn0005658, intron 4 of 9) -6682 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2238 chr2L 15403894 15404071 + 15 NA Intergenic Intergenic 21603 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11953 chr3R 23670165 23670349 + 15 NA promoter-TSS (FBgn0067407) pseudogene-promoter-TSS (FBgn0067407) -554 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4392 chr2R 5025412 5025521 + 15 NA promoter-TSS (FBgn0028955) protein_coding-promoter-TSS (FBgn0028955) -11 FBgn0260972 FBgn0260972 FBtr0088624 alc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8341 chr3L 17149354 17149423 + 15 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -10575 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_495 chr2L 3355864 3355995 + 15 NA promoter-TSS (FBgn0020445) protein_coding-promoter-TSS (FBgn0020445) -929 FBgn0020445 FBgn0020445 FBtr0089980 E23 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8648 chr3L 21585512 21585592 + 15 NA intron (FBgn0261953, intron 1 of 7) protein_coding-intron (FBgn0261953, intron 1 of 7) -2145 FBgn0264568 FBgn0264568 FBtr0333469 CR43940 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1337 chr2L 9371873 9372207 + 15 NA promoter-TSS (FBgn0264447) ncRNA-promoter-TSS (FBgn0264447) -62 FBgn0264447 FBgn0264447 FBtr0332596 CR43865 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1959 chr2L 14387867 14388314 + 15 NA Intergenic Intergenic -6920 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10239 chr3R 10735144 10735293 + 15 NA Intergenic Intergenic -5422 FBgn0028662 FBgn0028662 FBtr0308030 VhaPPA1-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3070 chr2L 19690082 19690262 + 15 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 10796 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4425 chr2R 5364376 5364455 + 15 NA exon (FBgn0259234, exon 16 of 19) protein_coding-exon (FBgn0259234, exon 16 of 19) -17259 FBgn0004360 FBgn0004360 FBtr0088512 Wnt2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9225 chr3R 2589653 2589711 + 15 NA exon (FBgn0000071, exon 2 of 2) protein_coding-exon (FBgn0000071, exon 2 of 2) 554 FBgn0000071 FBgn0000071 FBtr0081620 Ama protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7415 chr3L 8553202 8553338 + 15 NA promoter-TSS (FBgn0260442) protein_coding-promoter-TSS (FBgn0260442) -9165 FBgn0264511 FBgn0264511 FBtr0333110 CR43910 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1172 chr2L 8760631 8760758 + 15 NA Intergenic Intergenic 8014 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10878 chr3R 14997938 14998143 + 15 NA Intergenic Intergenic -4682 FBgn0038685 FBgn0038685 FBtr0083734 CG14282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11863 chr3R 23306487 23306858 + 15 NA TTS (FBgn0039519) protein_coding-TTS (FBgn0039519) 2273 FBgn0039519 FBgn0039519 FBtr0085183 Cyp6a18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9291 chr3R 2962834 2962891 + 15 NA exon (FBgn0037475, exon 2 of 5) protein_coding-exon (FBgn0037475, exon 2 of 5) 932 FBgn0037475 FBgn0037475 FBtr0081567 Fer1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3811 chr2L 22705513 22705951 + 15 NA Intergenic Intergenic -14724 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3511 chr2L 21880552 21880651 + 15 NA Intergenic Intergenic -13626 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11654 chr3R 22368336 22368390 + 15 NA intron (FBgn0263289, intron 2 of 24) protein_coding-intron (FBgn0263289, intron 2 of 22) 6291 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4606 chr2R 6801913 6802024 + 15 NA Intergenic Intergenic 4540 FBgn0033573 FBgn0033573 FBtr0088200 Obp47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11689 chr3R 22505158 22505212 + 15 NA intron (FBgn0250908, intron 1 of 8) protein_coding-intron (FBgn0250908, intron 1 of 8) 2503 FBgn0250908 FBgn0250908 FBtr0290328 beat-VII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2723 chr2L 17667987 17668041 + 15 NA exon (FBgn0015609, exon 12 of 22) protein_coding-exon (FBgn0015609, exon 12 of 22) -36667 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9740 chr3R 6660971 6661057 + 15 NA intron (FBgn0261053, intron 1 of 10) protein_coding-intron (FBgn0261053, intron 1 of 11) 8213 FBgn0261053 FBgn0261053 FBtr0304666 Cad86C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4084 chr2R 2781282 2781424 + 15 NA intron (FBgn0050158, intron 2 of 7) protein_coding-intron (FBgn0050158, intron 2 of 7) 2085 FBgn0050158 FBgn0050158 FBtr0086165 CG30158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13114 chrU 252672 252894 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12834 chr3RHet 430975 431168 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8703 chr3L 22485135 22485189 + 15 NA Intergenic Intergenic -9538 FBgn0263004 FBgn0263004 FBtr0306848 CG43312 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6126 chr2R 19611689 19611749 + 15 NA intron (FBgn0034897, intron 3 of 9) protein_coding-intron (FBgn0034897, intron 3 of 9) -4260 FBgn0034898 FBgn0034898 FBtr0072094 CG18128 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5391 chr2R 13390177 13390244 + 15 NA promoter-TSS (FBgn0262720) protein_coding-promoter-TSS (FBgn0262720) -1 FBgn0262720 FBgn0262720 FBtr0305704 CG43164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8918 chr3LHet 2134385 2134613 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2235 chr2L 15398100 15398285 + 15 NA Intergenic Intergenic 27393 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4832 chr2R 8521059 8521113 + 15 NA promoter-TSS (FBgn0028683) protein_coding-promoter-TSS (FBgn0028683) -8 FBgn0028683 FBgn0028683 FBtr0087840 spt4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13241 chrU 3341398 3341958 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11021 chr3R 15893576 15893813 + 15 NA Intergenic Intergenic 10222 FBgn0038772 FBgn0038772 FBtr0083835 CG4973 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10440 chr3R 12006692 12006791 + 15 NA promoter-TSS (FBgn0038405) protein_coding-promoter-TSS (FBgn0038405) -3 FBgn0038405 FBgn0038405 FBtr0100110 CG8927 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6595 chr2RHet 2074677 2074934 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2435 chr2L 16204208 16204328 + 15 NA Intergenic Intergenic -7191 FBgn0028893 FBgn0028893 FBtr0080821 CG31819 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10502 chr3R 12436559 12436635 + 15 NA TTS (FBgn0038448) protein_coding-TTS (FBgn0038448) 1117 FBgn0027109 FBgn0027109 FBtr0331686 npf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9044 chr3R 1235592 1235646 + 15 NA exon (FBgn0037324, exon 2 of 7) protein_coding-exon (FBgn0037324, exon 2 of 7) 2509 FBgn0037324 FBgn0037324 FBtr0078794 Orco protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13390 chrUextra 22954725 22954893 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2210 chr2L 15245971 15246203 + 15 NA promoter-TSS (FBgn0028516) protein_coding-promoter-TSS (FBgn0028516) -169 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13074 chrU 134102 134164 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_934 chr2L 6860092 6860308 + 15 NA TTS (FBgn0031865) protein_coding-TTS (FBgn0031865) 6030 FBgn0086451 FBgn0086451 FBtr0079343 l(2)k09022 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9285 chr3R 2872034 2872226 + 15 NA Intergenic Intergenic -5927 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1887 chr2L 14126757 14126811 + 15 NA Intergenic Intergenic -7707 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10700 chr3R 13731554 13731628 + 15 NA promoter-TSS (FBgn0038558) protein_coding-promoter-TSS (FBgn0038558) -595 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9364 chr3R 3485028 3485213 + 15 NA intron (FBgn0051146, intron 1 of 11) protein_coding-intron (FBgn0051146, intron 1 of 11) 1149 FBgn0051146 FBgn0051146 FBtr0305969 Nlg1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2969 chr2L 19107546 19107826 + 15 NA promoter-TSS (FBgn0002023) protein_coding-promoter-TSS (FBgn0002023) 99 FBgn0002023 FBgn0002023 FBtr0309834 Lim3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12183 chr3R 24570537 24570858 + 15 NA promoter-TSS (FBgn0039595) protein_coding-promoter-TSS (FBgn0039595) -212 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3430 chr2L 21702026 21702145 + 15 NA intron (FBgn0051619, intron 6 of 19) protein_coding-intron (FBgn0051619, intron 6 of 18) 17903 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12871 chr3RHet 1582915 1582974 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4070 chr2R 2668596 2668710 + 15 NA exon (FBgn0000473, exon 1 of 2) protein_coding-exon (FBgn0000473, exon 1 of 2) 343 FBgn0000473 FBgn0000473 FBtr0086133 Cyp6a2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6687 chr2RHet 3142490 3142678 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10372 chr3R 11698857 11698911 + 15 NA Intergenic Intergenic -3110 FBgn0051183 FBgn0051183 FBtr0083187 CG31183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9362 chr3R 3430899 3431146 + 15 NA exon (FBgn0083963, exon 2 of 13) protein_coding-exon (FBgn0083963, exon 2 of 13) 34134 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3113 chr2L 19875349 19875487 + 15 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 17132 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9326 chr3R 3138449 3138690 + 15 NA Intergenic Intergenic -3450 FBgn0259172 FBgn0259172 FBtr0299637 rn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10061 chr3R 9235868 9236053 + 15 NA exon (FBgn0041711, exon 3 of 3) protein_coding-exon (FBgn0041711, exon 3 of 3) -3271 FBgn0038151 FBgn0038151 FBtr0302576 yellow-e2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_58 chr2L 730050 730303 + 15 NA exon (FBgn0011244, exon 1 of 1) protein_coding-exon (FBgn0011244, exon 1 of 1) 1764 FBgn0011244 FBgn0011244 FBtr0078000 Hsp60B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6083 chr2R 19302111 19302283 + 15 NA exon (FBgn0034860, exon 4 of 6) protein_coding-exon (FBgn0034860, exon 4 of 6) -1271 FBgn0050411 FBgn0050411 FBtr0072016 CG30411 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11018 chr3R 15873751 15873946 + 15 NA exon (FBgn0260466, exon 23 of 25) protein_coding-exon (FBgn0260466, exon 23 of 25) 5340 FBgn0260466 FBgn0260466 FBtr0091938 Indy-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_191 chr2L 1246590 1246644 + 15 NA Intergenic Intergenic 6579 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11999 chr3R 23885573 23885740 + 15 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 33322 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11254 chr3R 17617564 17617675 + 15 NA intron (FBgn0013759, intron 9 of 17) protein_coding-intron (FBgn0013759, intron 9 of 17) 6373 FBgn0262331 FBgn0262331 FBtr0304511 mir-999 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10622 chr3R 13275269 13275328 + 15 NA promoter-TSS (FBgn0000564) protein_coding-promoter-TSS (FBgn0000564) -48 FBgn0000564 FBgn0000564 FBtr0083444 Eh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_971 chr2L 7166825 7166879 + 15 NA Intergenic Intergenic -15384 FBgn0031893 FBgn0031893 FBtr0113028 CG4495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5813 chr2R 17115599 17115816 + 15 NA intron (FBgn0034606, intron 2 of 7) protein_coding-intron (FBgn0034606, intron 2 of 7) -10423 FBgn0034605 FBgn0034605 FBtr0110814 CG15661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8071 chr3L 14605820 14605976 + 15 NA Intergenic Intergenic -1660 FBgn0003388 FBgn0003388 FBtr0304700 shd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5755 chr2R 16599619 16599704 + 15 NA intron (FBgn0040726, intron 1 of 7) protein_coding-intron (FBgn0040726, intron 1 of 7) 13306 FBgn0040726 FBgn0040726 FBtr0086238 dpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11951 chr3R 23665243 23665426 + 15 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) -5477 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_8758 chr3L 23626615 23626912 + 15 NA intron (FBgn0250816, intron 5 of 6) protein_coding-intron (FBgn0250816, intron 5 of 7) 77738 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_671 chr2L 4619727 4619840 + 15 NA Intergenic Intergenic -21513 FBgn0083938 FBgn0083938 FBtr0110769 BG642163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11641 chr3R 22310648 22310750 + 15 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 18904 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11403 chr3R 19804742 19805051 + 15 NA exon (FBgn0051140, exon 14 of 17) protein_coding-exon (FBgn0051140, exon 14 of 17) -4329 FBgn0051451 FBgn0051451 FBtr0308922 CR31451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10854 chr3R 14766899 14766990 + 15 NA intron (FBgn0261262, intron 3 of 17) protein_coding-intron (FBgn0261262, intron 3 of 18) -8974 FBgn0263983 FBgn0263983 FBtr0330024 CG43732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1533 chr2L 11378087 11378164 + 15 NA Intergenic Intergenic 14173 FBgn0263764 FBgn0263764 FBtr0333747 CG43681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1300 chr2L 9026277 9026478 + 15 NA promoter-TSS (FBgn0032090) protein_coding-promoter-TSS (FBgn0032090) -973 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1557 chr2L 11589495 11589569 + 15 NA Intergenic Intergenic 2146 FBgn0032367 FBgn0032367 FBtr0080270 CG6555 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11557 chr3R 21972861 21972928 + 15 NA Intergenic Intergenic 14018 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5569 chr2R 14963862 14963916 + 15 NA intron (FBgn0004168, intron 1 of 10) protein_coding-intron (FBgn0004168, intron 1 of 10) 9229 FBgn0004168 FBgn0004168 FBtr0086577 5-HT1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10800 chr3R 14357268 14357350 + 15 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 13999 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10400 chr3R 11898806 11898978 + 15 NA exon (FBgn0026059, exon 13 of 18) protein_coding-exon (FBgn0026059, exon 13 of 18) 2994 FBgn0026059 FBgn0026059 FBtr0303845 Mhcl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6638 chr2RHet 2265503 2265716 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3551 chr2L 21977398 21977653 + 15 NA Intergenic Intergenic 15408 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4540 chr2R 6230173 6230242 + 15 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 9459 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2805 chr2L 17974480 17974640 + 15 NA exon (FBgn0032656, exon 4 of 4) protein_coding-exon (FBgn0032656, exon 4 of 4) 7912 FBgn0023096 FBgn0023096 FBtr0273418 btv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5693 chr2R 16027135 16027379 + 15 NA Intergenic Intergenic -6381 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4446 chr2R 5508252 5508306 + 15 NA promoter-TSS (FBgn0262172) pre_miRNA-promoter-TSS (FBgn0262172) 509 FBgn0262385 FBgn0262385 FBtr0304246 mir-307a pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_9832 chr3R 7368039 7368387 + 15 NA exon (FBgn0053512, exon 1 of 6) protein_coding-exon (FBgn0053512, exon 1 of 6) -5596 FBgn0053512 FBgn0053512 FBtr0300492 dpr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_195 chr2L 1259104 1259192 + 15 NA intron (FBgn0041097, intron 1 of 11) protein_coding-intron (FBgn0041097, intron 1 of 11) 2722 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_443 chr2L 2822737 2822804 + 15 NA TTS (FBgn0031465) protein_coding-TTS (FBgn0031465) 2736 FBgn0031465 FBgn0031465 FBtr0077723 CG3123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2704 chr2L 17606074 17606128 + 15 NA Intergenic Intergenic 11436 FBgn0261089 FBgn0261089 FBtr0303255 Sytalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3004 chr2L 19291978 19292084 + 15 NA Intergenic Intergenic 7820 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10658 chr3R 13477947 13478196 + 15 NA intron (FBgn0038532, intron 2 of 7) protein_coding-intron (FBgn0038532, intron 1 of 6) 4670 FBgn0038532 FBgn0038532 FBtr0331346 CG14322 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3165 chr2L 20206927 20207003 + 15 NA Intergenic Intergenic -41258 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5960 chr2R 18228168 18228478 + 15 NA exon (FBgn0034720, exon 6 of 14) protein_coding-exon (FBgn0034720, exon 6 of 14) -7489 FBgn0034721 FBgn0034721 FBtr0071819 CG11298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8428 chr3L 17685448 17685610 + 15 NA intron (FBgn0052183, intron 1 of 9) protein_coding-intron (FBgn0052183, intron 1 of 9) 2414 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_796 chr2L 5652006 5652134 + 15 NA exon (FBgn0051646, exon 2 of 13) protein_coding-exon (FBgn0051646, exon 2 of 13) 6483 FBgn0051646 FBgn0051646 FBtr0079114 CG31646 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11338 chr3R 18849841 18849895 + 15 NA intron (FBgn0039039, intron 1 of 2) protein_coding-intron (FBgn0039039, intron 1 of 2) 2567 FBgn0039039 FBgn0039039 FBtr0084364 lmd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4018 chr2R 1765104 1765169 + 15 NA Intergenic Intergenic -16293 FBgn0263109 FBgn0263109 FBtr0307307 CG43366 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2754 chr2L 17797710 17797903 + 15 NA exon (FBgn0262018, exon 9 of 14) protein_coding-exon (FBgn0262018, exon 9 of 14) 5394 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3466 chr2L 21784511 21784707 + 15 NA promoter-TSS (FBgn0032964) protein_coding-promoter-TSS (FBgn0032964) -544 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7010 chr3L 3860316 3860370 + 15 NA exon (FBgn0013751, exon 4 of 6) protein_coding-exon (FBgn0013751, exon 4 of 6) 14137 FBgn0013751 FBgn0013751 FBtr0330071 Awh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11152 chr3R 16716409 16716469 + 15 NA promoter-TSS (FBgn0051480) tRNA-promoter-TSS (FBgn0051480) 19 FBgn0051480 FBgn0051480 FBtr0083975 tRNA:CR31480 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3264 chr2L 20625810 20626015 + 15 NA Intergenic Intergenic -7515 FBgn0262425 FBgn0262425 FBtr0304384 mir-288 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11010 chr3R 15792870 15792988 + 15 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) -6306 FBgn0051213 FBgn0051213 FBtr0083824 CG31213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1309 chr2L 9057003 9057081 + 15 NA intron (FBgn0051708, intron 6 of 9) protein_coding-intron (FBgn0051708, intron 6 of 9) 14120 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1929 chr2L 14316198 14316408 + 15 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -12126 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11572 chr3R 22029610 22029700 + 15 NA Intergenic Intergenic -12728 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6777 chr3L 964250 964347 + 15 NA intron (FBgn0264574, intron 1 of 15) protein_coding-intron (FBgn0264574, intron 1 of 10) 4638 FBgn0264574 FBgn0264574 FBtr0333507 Glut1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11196 chr3R 17213153 17213207 + 15 NA Intergenic Intergenic -1425 FBgn0004862 FBgn0004862 FBtr0084087 bap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4209 chr2R 3893163 3893310 + 15 NA exon (FBgn0013307, exon 3 of 6) protein_coding-exon (FBgn0013307, exon 3 of 6) 928 FBgn0013307 FBgn0013307 FBtr0088863 Odc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5268 chr2R 12248129 12248187 + 15 NA promoter-TSS (FBgn0034121) protein_coding-promoter-TSS (FBgn0034121) -973 FBgn0034121 FBgn0034121 FBtr0087153 CG6262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11466 chr3R 21439774 21439856 + 15 NA exon (FBgn0039346, exon 1 of 1) protein_coding-exon (FBgn0039346, exon 1 of 1) 288 FBgn0039346 FBgn0039346 FBtr0084883 CG5079 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9885 chr3R 7933548 7933624 + 15 NA exon (FBgn0051361, exon 3 of 7) protein_coding-exon (FBgn0051361, exon 3 of 7) 9778 FBgn0051361 FBgn0051361 FBtr0082543 dpr17 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8508 chr3L 18419707 18419761 + 15 NA Intergenic Intergenic 13308 FBgn0036786 FBgn0036786 FBtr0075119 skl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9150 chr3R 2104342 2104691 + 15 NA exon (FBgn0037419, exon 1 of 2) protein_coding-exon (FBgn0037419, exon 1 of 2) 263 FBgn0037419 FBgn0037419 FBtr0078602 Osi12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8690 chr3L 22310225 22310279 + 15 NA intron (FBgn0004449, intron 2 of 11) protein_coding-intron (FBgn0004449, intron 2 of 8) -12626 FBgn0052450 FBgn0052450 FBtr0078501 CG32450 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2793 chr2L 17944083 17944401 + 15 NA Intergenic Intergenic -19172 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7442 chr3L 8779143 8779291 + 15 NA exon (FBgn0261259, exon 8 of 17) protein_coding-exon (FBgn0261259, exon 8 of 17) 2428 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11249 chr3R 17585355 17585448 + 15 NA exon (FBgn0259237, exon 2 of 7) protein_coding-exon (FBgn0259237, exon 2 of 7) 905 FBgn0259237 FBgn0259237 FBtr0301691 CG42335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12777 chr3R 27648199 27648338 + 15 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -3298 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5113 chr2R 10828896 10829023 + 15 NA Intergenic Intergenic -1157 FBgn0033985 FBgn0033985 FBtr0087408 CG10257 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13724 chrX 13592539 13592595 + 15 NA intron (FBgn0052627, intron 1 of 8) protein_coding-intron (FBgn0052627, intron 1 of 9) 1872 FBgn0052627 FBgn0052627 FBtr0304972 NnaD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_480 chr2L 3236945 3236999 + 15 NA Intergenic Intergenic -32465 FBgn0031513 FBgn0031513 FBtr0301033 CG3347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_827 chr2L 5854876 5854983 + 15 NA intron (FBgn0085410, intron 8 of 9) protein_coding-intron (FBgn0085410, intron 8 of 9) 24552 FBgn0031745 FBgn0031745 FBtr0079158 CG8965 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6219 chr2R 20471165 20471231 + 15 NA intron (FBgn0020521, intron 1 of 7) protein_coding-intron (FBgn0020521, intron 2 of 8) 2412 FBgn0020521 FBgn0020521 FBtr0301502 pio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6085 chr2R 19313505 19313645 + 15 NA promoter-TSS (FBgn0034861) protein_coding-promoter-TSS (FBgn0034861) -155 FBgn0034861 FBgn0034861 FBtr0072024 CG9815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3298 chr2L 20779166 20779324 + 15 NA intron (FBgn0000251, intron 1 of 1) protein_coding-intron (FBgn0000251, intron 1 of 1) 8351 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_802 chr2L 5708400 5708454 + 15 NA promoter-TSS (FBgn0031730) protein_coding-promoter-TSS (FBgn0031730) -3532 FBgn0031730 FBgn0031730 FBtr0302950 CG7236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_394 chr2L 2462577 2462633 + 15 NA promoter-TSS (FBgn0012016) tRNA-promoter-TSS (FBgn0012016) 12 FBgn0012016 FBgn0012016 FBtr0089298 tRNA:Y1:22Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_8359 chr3L 17246292 17246789 + 15 NA exon (FBgn0036704, exon 1 of 1) protein_coding-exon (FBgn0036704, exon 1 of 1) 497 FBgn0036704 FBgn0036704 FBtr0075250 CG6497 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2429 chr2L 16166740 16166927 + 15 NA intron (FBgn0001991, intron 2 of 32) protein_coding-intron (FBgn0001991, intron 2 of 31) 1002 FBgn0001991 FBgn0001991 FBtr0332020 Ca-alpha1D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4583 chr2R 6573119 6573196 + 15 NA intron (FBgn0024836, intron 1 of 5) protein_coding-intron (FBgn0024836, intron 1 of 5) 12307 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7060 chr3L 4760711 4760771 + 15 NA intron (FBgn0035574, intron 5 of 10) protein_coding-intron (FBgn0035574, intron 5 of 10) 2858 FBgn0035572 FBgn0035572 FBtr0073347 CG13711 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6671 chr2RHet 2590076 2590203 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13300 chrUextra 226408 226627 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9848 chr3R 7553989 7554228 + 15 NA intron (FBgn0037941, intron 3 of 7) protein_coding-intron (FBgn0037941, intron 3 of 7) 6582 FBgn0037941 FBgn0037941 FBtr0082429 CG12594 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5466 chr2R 14097007 14097061 + 15 NA TTS (FBgn0050114) protein_coding-TTS (FBgn0050114) 1774 FBgn0050114 FBgn0050114 FBtr0086753 CG30114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11684 chr3R 22487934 22487988 + 15 NA exon (FBgn0250908, exon 6 of 9) protein_coding-exon (FBgn0250908, exon 6 of 9) 5793 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1115 chr2L 8602465 8602519 + 15 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -8003 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9651 chr3R 5942446 5942600 + 15 NA intron (FBgn0037788, intron 1 of 3) protein_coding-intron (FBgn0037788, intron 1 of 3) 4255 FBgn0037788 FBgn0037788 FBtr0082179 CG3940 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6131 chr2R 19650957 19651074 + 15 NA intron (FBgn0034903, intron 7 of 13) protein_coding-intron (FBgn0034903, intron 7 of 13) 10751 FBgn0034902 FBgn0034902 FBtr0072091 CG5532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7020 chr3L 3996043 3996109 + 15 NA Intergenic Intergenic -7404 FBgn0035482 FBgn0035482 FBtr0307170 CG14985 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1889 chr2L 14133900 14133954 + 15 NA promoter-TSS (FBgn0028906) protein_coding-promoter-TSS (FBgn0028906) -564 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11371 chr3R 19245187 19245309 + 15 NA intron (FBgn0039078, intron 2 of 3) protein_coding-intron (FBgn0039078, intron 2 of 3) 6503 FBgn0263777 FBgn0263777 FBtr0310577 CG43694 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1060 chr2L 8252236 8252464 + 15 NA exon (FBgn0032010, exon 3 of 5) protein_coding-exon (FBgn0032010, exon 3 of 5) 616 FBgn0032010 FBgn0032010 FBtr0079621 CG8086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11291 chr3R 18087755 18087916 + 15 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -30813 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_725 chr2L 5136365 5136763 + 15 NA exon (FBgn0261836, exon 7 of 18) protein_coding-exon (FBgn0261836, exon 7 of 18) -15185 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8542 chr3L 19048159 19048273 + 15 NA Intergenic Intergenic -1727 FBgn0263326 FBgn0263326 FBtr0308782 CG43407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7055 chr3L 4613830 4613952 + 15 NA promoter-TSS (FBgn0262733) protein_coding-promoter-TSS (FBgn0262733) -7374 FBgn0052246 FBgn0052246 FBtr0302941 CG32246 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6319 chr2RHet 142405 142465 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8815 chr3L 24112628 24112682 + 15 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 45326 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12866 chr3RHet 1449227 1449360 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1154 chr2L 8662921 8663421 + 15 NA intron (FBgn0011259, intron 19 of 20) protein_coding-intron (FBgn0011259, intron 19 of 21) -9981 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6260 chr2R 20810673 20810859 + 15 NA exon (FBgn0060296, exon 3 of 4) protein_coding-exon (FBgn0060296, exon 3 of 4) 353 FBgn0060296 FBgn0060296 FBtr0333814 pain protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6875 chr3L 1890682 1890736 + 15 NA exon (FBgn0262624, exon 5 of 6) protein_coding-exon (FBgn0262624, exon 5 of 6) 1219 FBgn0262624 FBgn0262624 FBtr0072837 Tmhs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12748 chr3R 27475938 27475992 + 15 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) -19222 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5929 chr2R 17977185 17977322 + 15 NA exon (FBgn0263250, exon 5 of 5) protein_coding-exon (FBgn0263250, exon 5 of 5) -1169 FBgn0034692 FBgn0034692 FBtr0113103 CG13502 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9852 chr3R 7594384 7594571 + 15 NA exon (FBgn0086910, exon 5 of 5) protein_coding-exon (FBgn0086910, exon 5 of 5) -8677 FBgn0017581 FBgn0017581 FBtr0082535 Lk6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12661 chr3R 27031135 27031217 + 15 NA exon (FBgn0000313, exon 12 of 15) protein_coding-exon (FBgn0000313, exon 12 of 15) 5276 FBgn0000313 FBgn0000313 FBtr0330101 chp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9817 chr3R 7216469 7216577 + 15 NA intron (FBgn0004595, intron 6 of 7) protein_coding-intron (FBgn0004595, intron 6 of 7) -17096 FBgn0037892 FBgn0037892 FBtr0082384 mRpL40 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3885 chr2LHet 257701 257833 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3174 chr2L 20246248 20246387 + 15 NA Intergenic Intergenic -1906 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_364 chr2L 2070435 2070601 + 15 NA intron (FBgn0053516, intron 2 of 7) protein_coding-intron (FBgn0053516, intron 2 of 7) -9459 FBgn0031388 FBgn0031388 FBtr0077827 CG12674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10863 chr3R 14814840 14814928 + 15 NA intron (FBgn0026239, intron 1 of 6) protein_coding-intron (FBgn0026239, intron 1 of 4) 5137 FBgn0026239 FBgn0026239 FBtr0112924 gukh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2197 chr2L 15211138 15211586 + 15 NA Intergenic Intergenic -3860 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2030 chr2L 14589994 14590221 + 15 NA Intergenic Intergenic -1873 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5520 chr2R 14568062 14568200 + 15 NA exon (FBgn0034374, exon 6 of 7) protein_coding-exon (FBgn0034374, exon 6 of 7) 6149 FBgn0034374 FBgn0034374 FBtr0299527 CG15086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_162 chr2L 1063898 1063975 + 15 NA intron (FBgn0003310, intron 1 of 4) protein_coding-intron (FBgn0003310, intron 1 of 4) 13875 FBgn0003310 FBgn0003310 FBtr0077994 S protein_coding Nup98-S2-pascual-garcia2017_R1_peak_379 chr2L 2267500 2267620 + 15 NA TTS (FBgn0250841) protein_coding-TTS (FBgn0250841) 1559 FBgn0250841 FBgn0250841 FBtr0077803 CG17242 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6783 chr3L 1082106 1082220 + 15 NA intron (FBgn0004870, intron 1 of 1) protein_coding-intron (FBgn0004870, intron 1 of 3) 18926 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1485 chr2L 10927555 10927609 + 15 NA intron (FBgn0261871, intron 2 of 8) protein_coding-intron (FBgn0261871, intron 2 of 7) -9080 FBgn0032318 FBgn0032318 FBtr0080145 CG14072 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8912 chr3LHet 1697496 1697550 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4185 chr2R 3655033 3655123 + 15 NA intron (FBgn0050497, intron 2 of 2) protein_coding-intron (FBgn0050497, intron 2 of 2) 17633 FBgn0000337 FBgn0000337 FBtr0088931 cn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10755 chr3R 14132519 14132691 + 15 NA exon (FBgn0038603, exon 4 of 8) protein_coding-exon (FBgn0038603, exon 4 of 8) 4023 FBgn0038603 FBgn0038603 FBtr0083592 PKD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4335 chr2R 4750028 4750194 + 15 NA intron (FBgn0011286, intron 1 of 26) protein_coding-intron (FBgn0011286, intron 1 of 26) 2242 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7196 chr3L 6449961 6450122 + 15 NA intron (FBgn0261801, intron 2 of 6) protein_coding-intron (FBgn0261801, intron 2 of 6) 31483 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13714 chrX 13321509 13321732 + 15 NA Intergenic Intergenic 14345 FBgn0030486 FBgn0030486 FBtr0301559 Set2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9018 chr3R 940070 940205 + 15 NA Intergenic Intergenic -5237 FBgn0262605 FBgn0262605 FBtr0305279 CG43131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12010 chr3R 23921874 23921996 + 15 NA Intergenic Intergenic -50667 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11475 chr3R 21652280 21652513 + 15 NA Intergenic Intergenic 3091 FBgn0011670 FBgn0011670 FBtr0084916 Mst57Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1619 chr2L 12184343 12184405 + 15 NA intron (FBgn0000114, intron 1 of 8) protein_coding-intron (FBgn0000114, intron 1 of 8) -6622 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12677 chr3R 27129015 27129219 + 15 NA exon (FBgn0039840, exon 2 of 2) protein_coding-exon (FBgn0039840, exon 2 of 2) 1845 FBgn0039840 FBgn0039840 FBtr0085766 CG11340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5250 chr2R 12058764 12059026 + 15 NA promoter-TSS (FBgn0034084) protein_coding-promoter-TSS (FBgn0034084) -529 FBgn0034084 FBgn0034084 FBtr0087249 CG8435 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12578 chr3R 26735964 26736368 + 15 NA Intergenic Intergenic -2444 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3663 chr2L 22224276 22224406 + 15 NA Intergenic Intergenic -1810 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11803 chr3R 23141834 23141888 + 15 NA exon (FBgn0039510, exon 10 of 32) protein_coding-exon (FBgn0039510, exon 10 of 32) 6186 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13298 chrUextra 204899 205156 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8110 chr3L 15036689 15036750 + 15 NA exon (FBgn0025776, exon 1 of 1) protein_coding-exon (FBgn0025776, exon 1 of 1) 305 FBgn0025776 FBgn0025776 FBtr0333875 ind protein_coding Nup98-S2-pascual-garcia2017_R1_peak_871 chr2L 6310560 6310614 + 15 NA intron (FBgn0053531, intron 15 of 17) protein_coding-intron (FBgn0053531, intron 15 of 17) 1768 FBgn0260452 FBgn0260452 FBtr0079247 CG13984 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4258 chr2R 4240583 4240717 + 15 NA intron (FBgn0261588, intron 2 of 10) protein_coding-intron (FBgn0261588, intron 2 of 10) -5393 FBgn0033283 FBgn0033283 FBtr0088739 CG11635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2091 chr2L 14800973 14801049 + 15 NA Intergenic Intergenic -1323 FBgn0250834 FBgn0250834 FBtr0080673 CG33308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12138 chr3R 24392455 24392578 + 15 NA Intergenic Intergenic 18318 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1639 chr2L 12364465 12364519 + 15 NA intron (FBgn0262475, intron 5 of 9) protein_coding-intron (FBgn0262475, intron 5 of 9) 8051 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_962 chr2L 7133092 7133146 + 15 NA exon (FBgn0085407, exon 1 of 6) protein_coding-exon (FBgn0085407, exon 1 of 6) 408 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3187 chr2L 20364289 20364570 + 15 NA exon (FBgn0015803, exon 8 of 8) protein_coding-exon (FBgn0015803, exon 8 of 8) 9538 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8386 chr3L 17377261 17377329 + 15 NA exon (FBgn0036717, exon 3 of 3) protein_coding-exon (FBgn0036717, exon 3 of 3) -1467 FBgn0036716 FBgn0036716 FBtr0075238 CG13728 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4781 chr2R 7982439 7982792 + 15 NA intron (FBgn0086677, intron 1 of 2) protein_coding-intron (FBgn0086677, intron 1 of 2) 13834 FBgn0033680 FBgn0033680 FBtr0087981 CG13186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3368 chr2L 21280243 21280356 + 15 NA exon (FBgn0032938, exon 9 of 11) protein_coding-exon (FBgn0032938, exon 9 of 11) 3974 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10485 chr3R 12351408 12351462 + 15 NA intron (FBgn0259244, intron 2 of 15) protein_coding-intron (FBgn0259244, intron 2 of 16) 22912 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_578 chr2L 4047907 4047986 + 15 NA intron (FBgn0000547, intron 2 of 8) protein_coding-intron (FBgn0000547, intron 2 of 8) 16567 FBgn0000547 FBgn0000547 FBtr0077465 ed protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7069 chr3L 4939328 4939406 + 15 NA exon (FBgn0005775, exon 5 of 5) protein_coding-exon (FBgn0005775, exon 5 of 5) -8229 FBgn0263618 FBgn0263618 FBtr0309984 CR43627 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2260 chr2L 15473671 15473839 + 15 NA Intergenic Intergenic 4514 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3771 chr2L 22599303 22599478 + 15 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 45137 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5863 chr2R 17454832 17455115 + 15 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 8567 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6152 chr2R 19967098 19967175 + 15 NA exon (FBgn0034972, exon 2 of 2) protein_coding-exon (FBgn0034972, exon 2 of 2) 863 FBgn0034972 FBgn0034972 FBtr0072288 CG10339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7176 chr3L 6291752 6291924 + 15 NA Intergenic Intergenic -21873 FBgn0041625 FBgn0041625 FBtr0077004 Or65a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_749 chr2L 5401105 5401163 + 15 NA Intergenic Intergenic -3208 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1603 chr2L 11968291 11968454 + 15 NA intron (FBgn0263019, intron 1 of 1) ncRNA-intron (FBgn0263019, intron 1 of 2) 2722 FBgn0263019 FBgn0263019 FBtr0306898 CR43314 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9754 chr3R 6760559 6760720 + 15 NA Intergenic Intergenic -15367 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4729 chr2R 7706964 7707154 + 15 NA Intergenic Intergenic -5811 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6092 chr2R 19357256 19357312 + 15 NA TTS (FBgn0034865) protein_coding-TTS (FBgn0034865) 2014 FBgn0034865 FBgn0034865 FBtr0072021 Or59b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11759 chr3R 22864016 22864158 + 15 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -10855 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3766 chr2L 22594373 22594430 + 15 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 50126 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3097 chr2L 19800518 19800716 + 15 NA intron (FBgn0263873, intron 1 of 15) protein_coding-intron (FBgn0263873, intron 1 of 15) -4766 FBgn0004811 FBgn0004811 FBtr0332246 fs(2)ltoPP43 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13029 chr4 1198361 1198495 + 15 NA intron (FBgn0002521, intron 2 of 6) protein_coding-intron (FBgn0002521, intron 2 of 6) 3814 FBgn0002521 FBgn0002521 FBtr0089205 pho protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1456 chr2L 10692366 10692475 + 15 NA TTS (FBgn0032285) protein_coding-TTS (FBgn0032285) 1683 FBgn0032285 FBgn0032285 FBtr0080127 CG17108 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1132 chr2L 8626996 8627342 + 15 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 7141 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5811 chr2R 17111817 17111973 + 15 NA promoter-TSS (FBgn0034606) protein_coding-promoter-TSS (FBgn0034606) -6611 FBgn0034605 FBgn0034605 FBtr0110814 CG15661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7019 chr3L 3987158 3987275 + 15 NA exon (FBgn0004880, exon 2 of 2) protein_coding-exon (FBgn0004880, exon 2 of 2) 3320 FBgn0004880 FBgn0004880 FBtr0073165 scrt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7068 chr3L 4935920 4935974 + 15 NA TTS (FBgn0005775) protein_coding-TTS (FBgn0005775) -4809 FBgn0263618 FBgn0263618 FBtr0309984 CR43627 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1732 chr2L 12884164 12884422 + 15 NA Intergenic Intergenic -28237 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3491 chr2L 21855309 21855422 + 15 NA Intergenic Intergenic 26772 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2598 chr2L 17090596 17090721 + 15 NA Intergenic Intergenic 3017 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2054 chr2L 14661366 14661901 + 15 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 27692 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_892 chr2L 6537891 6538023 + 15 NA intron (FBgn0000320, intron 1 of 4) protein_coding-intron (FBgn0000320, intron 1 of 4) -7448 FBgn0000320 FBgn0000320 FBtr0306113 eya protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10154 chr3R 9872372 9872463 + 15 NA Intergenic Intergenic -2089 FBgn0011971 FBgn0011971 FBtr0082919 tRNA:S2b:88A tRNA Nup98-S2-pascual-garcia2017_R1_peak_7957 chr3L 13733995 13734063 + 15 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 62471 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9327 chr3R 3138868 3138974 + 15 NA Intergenic Intergenic -3802 FBgn0259172 FBgn0259172 FBtr0299637 rn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12110 chr3R 24290381 24290612 + 15 NA intron (FBgn0039584, intron 5 of 6) protein_coding-intron (FBgn0039584, intron 5 of 6) -19783 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6489 chr2RHet 1678640 1678698 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12678 chr3R 27131055 27131385 + 15 NA promoter-TSS (FBgn0039840) protein_coding-promoter-TSS (FBgn0039840) -258 FBgn0039840 FBgn0039840 FBtr0085766 CG11340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12778 chr3R 27649215 27649424 + 15 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -2247 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3786 chr2L 22626760 22626953 + 15 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 17671 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9622 chr3R 5659291 5659419 + 15 NA intron (FBgn0037766, intron 2 of 2) protein_coding-intron (FBgn0037766, intron 2 of 2) -8769 FBgn0262105 FBgn0262105 FBtr0304027 CR42858 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6378 chr2RHet 586280 586435 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6014 chr2R 18764064 18764239 + 15 NA exon (FBgn0034789, exon 6 of 14) protein_coding-exon (FBgn0034789, exon 6 of 14) 1857 FBgn0034789 FBgn0034789 FBtr0304923 PIP5K59B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11470 chr3R 21544155 21544209 + 15 NA exon (FBgn0051092, exon 2 of 10) protein_coding-exon (FBgn0051092, exon 2 of 10) 22005 FBgn0051092 FBgn0051092 FBtr0113387 LpR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6249 chr2R 20739510 20739570 + 15 NA Intergenic Intergenic 3041 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6276 chr2R 20983614 20983674 + 15 NA exon (FBgn0003715, exon 2 of 4) protein_coding-exon (FBgn0003715, exon 2 of 4) 3067 FBgn0003715 FBgn0003715 FBtr0330231 CG16778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2267 chr2L 15486440 15486494 + 15 NA TTS (FBgn0020371) protein_coding-TTS (FBgn0020371) 1699 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_380 chr2L 2277770 2277824 + 15 NA TTS (FBgn0264084) ncRNA-TTS (FBgn0264084) 1917 FBgn0264084 FBgn0264084 FBtr0330688 CR43753 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6648 chr2RHet 2317524 2317794 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9281 chr3R 2852626 2852680 + 15 NA Intergenic Intergenic -25404 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5168 chr2R 11288816 11289012 + 15 NA exon (FBgn0263980, exon 1 of 15) protein_coding-exon (FBgn0263980, exon 1 of 15) -7437 FBgn0014865 FBgn0014865 FBtr0087386 Mtk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3437 chr2L 21720359 21720709 + 15 NA TTS (FBgn0051619) protein_coding-TTS (FBgn0051619) 36352 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5684 chr2R 15953890 15953974 + 15 NA Intergenic Intergenic -45084 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4644 chr2R 7200220 7200441 + 15 NA TTS (FBgn0016047) protein_coding-TTS (FBgn0016047) 1969 FBgn0262574 FBgn0262574 FBtr0304945 CG43114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11978 chr3R 23828195 23828335 + 15 NA Intergenic Intergenic -11792 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1769 chr2L 13109219 13109277 + 15 NA exon (FBgn0032470, exon 5 of 5) protein_coding-exon (FBgn0032470, exon 5 of 5) 2377 FBgn0032470 FBgn0032470 FBtr0301366 CG5142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3868 chr2LHet 166570 166690 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12000 chr3R 23887817 23887965 + 15 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 35557 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10306 chr3R 11319529 11319623 + 15 NA promoter-TSS (FBgn0038345) protein_coding-promoter-TSS (FBgn0038345) -748 FBgn0038345 FBgn0038345 FBtr0083148 CG5213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9623 chr3R 5661537 5661591 + 15 NA intron (FBgn0037766, intron 2 of 2) protein_coding-intron (FBgn0037766, intron 2 of 2) -10978 FBgn0262105 FBgn0262105 FBtr0304027 CR42858 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11115 chr3R 16439850 16440101 + 15 NA exon (FBgn0038814, exon 3 of 7) protein_coding-exon (FBgn0038814, exon 3 of 7) 2644 FBgn0038814 FBgn0038814 FBtr0330028 CG15923 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12567 chr3R 26697807 26697920 + 15 NA exon (FBgn0039806, exon 2 of 3) protein_coding-exon (FBgn0039806, exon 2 of 3) 139 FBgn0039806 FBgn0039806 FBtr0085719 CG15545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8207 chr3L 16028924 16029146 + 15 NA exon (FBgn0036560, exon 2 of 4) protein_coding-exon (FBgn0036560, exon 2 of 4) 257 FBgn0036560 FBgn0036560 FBtr0333614 CG5895 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11692 chr3R 22514384 22514518 + 15 NA Intergenic Intergenic 4794 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9563 chr3R 5117139 5117283 + 15 NA Intergenic Intergenic 24457 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3418 chr2L 21640712 21640876 + 15 NA exon (FBgn0023416, exon 13 of 19) protein_coding-exon (FBgn0023416, exon 13 of 19) 8207 FBgn0023416 FBgn0023416 FBtr0100324 Ac3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13440 chrX 1389537 1389706 + 15 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 2 of 10) 12221 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9034 chr3R 1140969 1141043 + 15 NA intron (FBgn0013576, intron 2 of 16) protein_coding-intron (FBgn0013576, intron 2 of 18) 15139 FBgn0037310 FBgn0037310 FBtr0078784 Tim17b1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1825 chr2L 13670286 13670502 + 15 NA TTS (FBgn0028527) protein_coding-TTS (FBgn0028527) 4869 FBgn0028527 FBgn0028527 FBtr0080527 CG18507 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6063 chr2R 19138242 19138356 + 15 NA Intergenic Intergenic -2889 FBgn0034837 FBgn0034837 FBtr0072049 RpL22-like protein_coding Nup98-S2-pascual-garcia2017_R1_peak_586 chr2L 4130581 4130707 + 15 NA Intergenic Intergenic 8923 FBgn0014033 FBgn0014033 FBtr0077467 Sr-CI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10610 chr3R 13162014 13162165 + 15 NA intron (FBgn0038498, intron 2 of 6) protein_coding-intron (FBgn0038498, intron 2 of 6) 29750 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_680 chr2L 4687677 4687823 + 15 NA TTS (FBgn0031620) protein_coding-TTS (FBgn0031620) 237 FBgn0031621 FBgn0031621 FBtr0077378 CG15634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_331 chr2L 1788202 1788274 + 15 NA TTS (FBgn0045498) protein_coding-TTS (FBgn0045498) 2123 FBgn0045498 FBgn0045498 FBtr0310114 Gr22d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3408 chr2L 21579833 21580055 + 15 NA intron (FBgn0016919, intron 5 of 6) protein_coding-intron (FBgn0016919, intron 5 of 7) -2268 FBgn0260718 FBgn0260718 FBtr0331679 CR42545 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1497 chr2L 11139070 11139141 + 15 NA TTS (FBgn0040211) protein_coding-TTS (FBgn0040211) 2710 FBgn0040211 FBgn0040211 FBtr0080201 hgo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13025 chr4 1126824 1126878 + 15 NA exon (FBgn0005561, exon 7 of 13) protein_coding-exon (FBgn0005561, exon 7 of 13) 7838 FBgn0005561 FBgn0005561 FBtr0301563 sv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7175 chr3L 6285757 6285868 + 15 NA Intergenic Intergenic 17012 FBgn0262787 FBgn0262787 FBtr0305900 CG43168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2898 chr2L 18483922 18484135 + 15 NA exon (FBgn0032681, exon 1 of 9) protein_coding-exon (FBgn0032681, exon 1 of 9) 485 FBgn0032681 FBgn0032681 FBtr0300676 CG10283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6942 chr3L 2688194 2688347 + 15 NA intron (FBgn0264606, intron 3 of 16) protein_coding-intron (FBgn0264606, intron 3 of 17) 23420 FBgn0264606 FBgn0264606 FBtr0333631 CG43955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3006 chr2L 19295517 19295844 + 15 NA Intergenic Intergenic 4171 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10899 chr3R 15119806 15119860 + 15 NA Intergenic Intergenic 5754 FBgn0263405 FBgn0263405 FBtr0309184 CR43451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8755 chr3L 23592415 23592585 + 15 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 43475 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11203 chr3R 17248349 17248479 + 15 NA intron (FBgn0008651, intron 1 of 3) protein_coding-intron (FBgn0008651, intron 1 of 2) 11441 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1709 chr2L 12789308 12789433 + 15 NA Intergenic Intergenic 18970 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1394 chr2L 9869548 9869764 + 15 NA exon (FBgn0032151, exon 2 of 14) protein_coding-exon (FBgn0032151, exon 2 of 14) 16594 FBgn0032151 FBgn0032151 FBtr0331284 nAcRalpha-30D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10603 chr3R 13116423 13116583 + 15 NA Intergenic Intergenic 2993 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4069 chr2R 2667878 2667932 + 15 NA exon (FBgn0000473, exon 1 of 2) protein_coding-exon (FBgn0000473, exon 1 of 2) 1091 FBgn0000473 FBgn0000473 FBtr0086133 Cyp6a2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8339 chr3L 17143184 17143388 + 15 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -16677 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11220 chr3R 17332291 17332355 + 15 NA intron (FBgn0004863, intron 2 of 3) protein_coding-intron (FBgn0004863, intron 2 of 3) 6346 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7235 chr3L 6868792 6868963 + 15 NA Intergenic Intergenic 38187 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12307 chr3R 25179688 25179765 + 15 NA Intergenic Intergenic -34390 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11139 chr3R 16579782 16579836 + 15 NA TTS (FBgn0259222) protein_coding-TTS (FBgn0259222) -2642 FBgn0038826 FBgn0038826 FBtr0113255 CG17838 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3534 chr2L 21957980 21958098 + 15 NA Intergenic Intergenic 34894 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12061 chr3R 24098621 24098830 + 15 NA Intergenic Intergenic -8230 FBgn0262587 FBgn0262587 FBtr0305116 CG43124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7508 chr3L 9632961 9633138 + 15 NA TTS (FBgn0036022) protein_coding-TTS (FBgn0036022) 678 FBgn0036023 FBgn0036023 FBtr0076388 CG18179 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3848 chr2L 22906560 22907479 + 15 NA exon (FBgn0250907, exon 4 of 9) protein_coding-exon (FBgn0250907, exon 4 of 9) 11541 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7988 chr3L 13952123 13952273 + 15 NA intron (FBgn0052137, intron 2 of 6) protein_coding-intron (FBgn0052137, intron 2 of 6) 5604 FBgn0025874 FBgn0025874 FBtr0333030 Meics protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4396 chr2R 5135605 5135729 + 15 NA promoter-TSS (FBgn0010114) protein_coding-promoter-TSS (FBgn0010114) -915 FBgn0010114 FBgn0010114 FBtr0088607 hig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7390 chr3L 8324513 8324608 + 15 NA Intergenic Intergenic 2877 FBgn0085491 FBgn0085491 FBtr0112768 CG34462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1332 chr2L 9340304 9340410 + 15 NA exon (FBgn0026439, exon 9 of 11) protein_coding-exon (FBgn0026439, exon 9 of 11) -2475 FBgn0032110 FBgn0032110 FBtr0079803 CG3748 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3050 chr2L 19606407 19606461 + 15 NA promoter-TSS (FBgn0000464) protein_coding-promoter-TSS (FBgn0000464) 19811 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1524 chr2L 11328090 11328239 + 15 NA Intergenic Intergenic 15099 FBgn0032360 FBgn0032360 FBtr0080251 CG14926 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11494 chr3R 21727341 21727423 + 15 NA promoter-TSS (FBgn0051089) protein_coding-promoter-TSS (FBgn0051089) -983 FBgn0051089 FBgn0051089 FBtr0084942 CG31089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7858 chr3L 13053733 13053907 + 15 NA intron (FBgn0036343, intron 3 of 3) protein_coding-intron (FBgn0036343, intron 3 of 3) 674 FBgn0036343 FBgn0036343 FBtr0075893 CG14115 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5732 chr2R 16359666 16359853 + 15 NA exon (FBgn0086604, exon 18 of 21) protein_coding-exon (FBgn0086604, exon 18 of 21) -31361 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9679 chr3R 6259773 6260023 + 15 NA promoter-TSS (FBgn0037817) protein_coding-promoter-TSS (FBgn0037817) -613 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_617 chr2L 4298658 4298989 + 15 NA intron (FBgn0010473, intron 3 of 12) protein_coding-intron (FBgn0010473, intron 3 of 6) 15675 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9865 chr3R 7702822 7702979 + 15 NA promoter-TSS (FBgn0003312) protein_coding-promoter-TSS (FBgn0003312) -57 FBgn0003312 FBgn0003312 FBtr0082475 sad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6919 chr3L 2298879 2299095 + 15 NA exon (FBgn0264002, exon 3 of 4) protein_coding-exon (FBgn0264002, exon 3 of 4) 16104 FBgn0264002 FBgn0264002 FBtr0330358 DmsR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2599 chr2L 17091577 17091644 + 15 NA Intergenic Intergenic 3969 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5859 chr2R 17451910 17452259 + 15 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 11456 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7932 chr3L 13591199 13591404 + 15 NA intron (FBgn0264001, intron 3 of 10) protein_coding-intron (FBgn0264001, intron 5 of 12) -22636 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5868 chr2R 17458981 17459136 + 15 NA promoter-TSS (FBgn0034636) protein_coding-promoter-TSS (FBgn0034636) 4482 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13480 chrX 1864828 1864882 + 15 NA intron (FBgn0264562, intron 4 of 11) protein_coding-intron (FBgn0264562, intron 4 of 11) 28882 FBgn0264562 FBgn0264562 FBtr0333339 Hr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4653 chr2R 7234288 7234416 + 15 NA promoter-TSS (FBgn0010425) protein_coding-promoter-TSS (FBgn0010425) 512 FBgn0010357 FBgn0010357 FBtr0088122 betaTry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9561 chr3R 5115868 5115993 + 15 NA Intergenic Intergenic 23176 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3633 chr2L 22160268 22160329 + 15 NA TTS (FBgn0261802) protein_coding-TTS (FBgn0261802) 8544 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_295 chr2L 1544497 1544584 + 15 NA Intergenic Intergenic -10590 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13818 chrX 18658973 18659136 + 15 NA exon (FBgn0030954, exon 5 of 5) protein_coding-exon (FBgn0030954, exon 5 of 5) 9210 FBgn0030954 FBgn0030954 FBtr0113003 CCKLR-17D3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1967 chr2L 14410408 14410518 + 15 NA promoter-TSS (FBgn0004858) protein_coding-promoter-TSS (FBgn0004858) -916 FBgn0004858 FBgn0004858 FBtr0080637 elB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2777 chr2L 17874137 17874505 + 15 NA intron (FBgn0262018, intron 1 of 14) protein_coding-intron (FBgn0262018, intron 1 of 14) 926 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1866 chr2L 14005001 14005239 + 15 NA Intergenic Intergenic -3007 FBgn0261582 FBgn0261582 FBtr0302893 CG42692 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10206 chr3R 10376498 10376633 + 15 NA intron (FBgn0038237, intron 2 of 13) protein_coding-intron (FBgn0038237, intron 2 of 13) 7129 FBgn0038237 FBgn0038237 FBtr0330048 Pde6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11054 chr3R 16025133 16025224 + 15 NA Intergenic Intergenic -5353 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8235 chr3L 16262728 16262853 + 15 NA TTS (FBgn0085277) protein_coding-TTS (FBgn0085277) 298 FBgn0036588 FBgn0036588 FBtr0075464 CG13068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7314 chr3L 7462881 7463034 + 15 NA exon (FBgn0035787, exon 1 of 1) protein_coding-exon (FBgn0035787, exon 1 of 1) 445 FBgn0035787 FBgn0035787 FBtr0076863 CG8543 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10405 chr3R 11905314 11905636 + 15 NA exon (FBgn0052855, exon 1 of 1) protein_coding-exon (FBgn0052855, exon 1 of 1) 1245 FBgn0052855 FBgn0052855 FBtr0083234 CG32855 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11379 chr3R 19408587 19408656 + 15 NA Intergenic Intergenic 6916 FBgn0039091 FBgn0039091 FBtr0084486 CG10182 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_467 chr2L 3092177 3092408 + 15 NA intron (FBgn0015600, intron 4 of 8) protein_coding-intron (FBgn0015600, intron 6 of 10) 15850 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6433 chr2RHet 983791 984061 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8238 chr3L 16270837 16270980 + 15 NA TTS (FBgn0036591) protein_coding-TTS (FBgn0036591) 373 FBgn0036590 FBgn0036590 FBtr0075468 CG13065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3052 chr2L 19621249 19621466 + 15 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 34734 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9575 chr3R 5139125 5139847 + 15 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -8006 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11225 chr3R 17387340 17387544 + 15 NA Intergenic Intergenic -4438 FBgn0002941 FBgn0002941 FBtr0330389 slou protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6380 chr2RHet 591057 591256 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1829 chr2L 13709033 13709192 + 15 NA exon (FBgn0028848, exon 2 of 2) protein_coding-exon (FBgn0028848, exon 2 of 2) 897 FBgn0028848 FBgn0028848 FBtr0310273 CG7311 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6968 chr3L 3007150 3007310 + 15 NA intron (FBgn0035385, intron 1 of 1) protein_coding-intron (FBgn0035385, intron 1 of 1) 3814 FBgn0035385 FBgn0035385 FBtr0332085 FR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_231 chr2L 1387180 1387305 + 15 NA exon (FBgn0002543, exon 11 of 14) protein_coding-exon (FBgn0002543, exon 11 of 14) 19153 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3296 chr2L 20776015 20776082 + 15 NA intron (FBgn0000251, intron 1 of 1) protein_coding-intron (FBgn0000251, intron 1 of 1) 5154 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10434 chr3R 11983774 11983925 + 15 NA promoter-TSS (FBgn0063649) protein_coding-promoter-TSS (FBgn0063649) -34 FBgn0063649 FBgn0063649 FBtr0309303 CG6006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9164 chr3R 2166596 2166791 + 15 NA promoter-TSS (FBgn0037431) protein_coding-promoter-TSS (FBgn0037431) 874 FBgn0037430 FBgn0037430 FBtr0081708 Osi20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11037 chr3R 15942965 15943019 + 15 NA TTS (FBgn0038773) protein_coding-TTS (FBgn0038773) 2331 FBgn0038773 FBgn0038773 FBtr0083864 CG10887 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1536 chr2L 11427980 11428062 + 15 NA Intergenic Intergenic 17582 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_615 chr2L 4295148 4295311 + 15 NA exon (FBgn0010473, exon 3 of 7) protein_coding-exon (FBgn0010473, exon 3 of 7) 12081 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13496 chrX 2847833 2847887 + 15 NA exon (FBgn0003285, exon 8 of 8) protein_coding-exon (FBgn0003285, exon 8 of 8) 5793 FBgn0029648 FBgn0029648 FBtr0070558 CG3603 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6658 chr2RHet 2375325 2375498 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12331 chr3R 25264105 25264320 + 15 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -41208 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3986 chr2R 1104218 1104340 + 15 NA intron (FBgn0053554, intron 5 of 20) protein_coding-intron (FBgn0053554, intron 6 of 20) 34274 FBgn0053554 FBgn0053554 FBtr0303293 Nipped-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7334 chr3L 7626657 7626711 + 15 NA exon (FBgn0035802, exon 1 of 9) protein_coding-exon (FBgn0035802, exon 1 of 9) -6133 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3832 chr2L 22867317 22867420 + 15 NA Intergenic Intergenic -7166 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10601 chr3R 13102390 13102444 + 15 NA Intergenic Intergenic -7100 FBgn0051418 FBgn0051418 FBtr0083432 CG31418 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10963 chr3R 15554426 15554516 + 15 NA Intergenic Intergenic -2210 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5780 chr2R 16811340 16811394 + 15 NA exon (FBgn0020617, exon 4 of 6) protein_coding-exon (FBgn0020617, exon 4 of 6) 7082 FBgn0020617 FBgn0020617 FBtr0071518 Rx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_919 chr2L 6774590 6774763 + 15 NA exon (FBgn0031858, exon 1 of 7) protein_coding-exon (FBgn0031858, exon 1 of 7) -1036 FBgn0031858 FBgn0031858 FBtr0332335 CG17378 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3882 chr2LHet 250380 250625 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12056 chr3R 24063592 24063791 + 15 NA exon (FBgn0085383, exon 9 of 9) protein_coding-exon (FBgn0085383, exon 9 of 9) 25653 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13090 chrU 190318 190372 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1523 chr2L 11324239 11324328 + 15 NA Intergenic Intergenic 16530 FBgn0263874 FBgn0263874 FBtr0329848 CR43721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1922 chr2L 14304039 14304151 + 15 NA intron (FBgn0261563, intron 1 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -8701 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9862 chr3R 7687637 7687758 + 15 NA intron (FBgn0037956, intron 1 of 3) protein_coding-intron (FBgn0037956, intron 1 of 2) 7486 FBgn0037956 FBgn0037956 FBtr0299594 CG6959 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10456 chr3R 12214708 12214868 + 15 NA intron (FBgn0003513, intron 3 of 8) protein_coding-intron (FBgn0003513, intron 3 of 7) 14624 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6281 chr2R 21012391 21012675 + 15 NA Intergenic Intergenic -4422 FBgn0050430 FBgn0050430 FBtr0072448 CG30430 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2654 chr2L 17284251 17284379 + 15 NA Intergenic Intergenic -1979 FBgn0032631 FBgn0032631 FBtr0302408 CG15140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3548 chr2L 21974510 21974587 + 15 NA Intergenic Intergenic 18385 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5583 chr2R 15142907 15143204 + 15 NA Intergenic Intergenic -2365 FBgn0053453 FBgn0053453 FBtr0086564 CG33453 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3976 chr2R 905604 905708 + 15 NA intron (FBgn0040849, intron 2 of 4) protein_coding-intron (FBgn0040849, intron 2 of 4) 52059 FBgn0013348 FBgn0013348 FBtr0086102 TpnC41C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4610 chr2R 6854413 6854498 + 15 NA Intergenic Intergenic -25249 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13741 chrX 14552839 14552988 + 15 NA Intergenic Intergenic -5049 FBgn0015773 FBgn0015773 FBtr0308337 NetA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_46 chr2L 616123 616177 + 15 NA Intergenic Intergenic 5108 FBgn0040106 FBgn0040106 FBtr0308305 lectin-21Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3141 chr2L 20027295 20027377 + 15 NA promoter-TSS (FBgn0032840) protein_coding-promoter-TSS (FBgn0032840) -579 FBgn0032840 FBgn0032840 FBtr0081327 sNPF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3170 chr2L 20231688 20231799 + 15 NA Intergenic Intergenic -16480 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9024 chr3R 971010 971091 + 15 NA Intergenic Intergenic -7755 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12351 chr3R 25368265 25368490 + 15 NA Intergenic Intergenic 8019 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_659 chr2L 4518739 4518958 + 15 NA exon (FBgn0053196, exon 37 of 47) protein_coding-exon (FBgn0053196, exon 37 of 47) -41824 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6051 chr2R 18990985 18991245 + 15 NA TTS (FBgn0041236) protein_coding-TTS (FBgn0041236) 141 FBgn0041235 FBgn0041235 FBtr0071977 Gr59c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2229 chr2L 15375443 15375536 + 15 NA Intergenic Intergenic -13862 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1575 chr2L 11788990 11789057 + 15 NA promoter-TSS (FBgn0032375) protein_coding-promoter-TSS (FBgn0032375) 562 FBgn0032374 FBgn0032374 FBtr0300370 CG14931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13240 chrU 3299458 3299702 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9658 chr3R 6010316 6010493 + 15 NA intron (FBgn0037796, intron 2 of 10) protein_coding-intron (FBgn0037796, intron 2 of 9) 4911 FBgn0037796 FBgn0037796 FBtr0306090 CG12814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5455 chr2R 13957351 13957434 + 15 NA intron (FBgn0085415, intron 1 of 4) protein_coding-intron (FBgn0085415, intron 1 of 4) 7183 FBgn0085415 FBgn0085415 FBtr0112627 CG34386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9631 chr3R 5784292 5784346 + 15 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 27463 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11282 chr3R 17956727 17956789 + 15 NA exon (FBgn0259736, exon 9 of 12) protein_coding-exon (FBgn0259736, exon 9 of 12) -2799 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6424 chr2RHet 919704 919789 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8466 chr3L 18029452 18029588 + 15 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -3897 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8774 chr3L 23758310 23758587 + 15 NA Intergenic Intergenic -18883 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_135 chr2L 986824 986966 + 15 NA Intergenic Intergenic 39995 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2029 chr2L 14586279 14586511 + 15 NA Intergenic Intergenic 1839 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2811 chr2L 17988968 17989453 + 15 NA TTS (FBgn0032658) protein_coding-TTS (FBgn0032658) -1208 FBgn0051742 FBgn0051742 FBtr0081025 CG31742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12155 chr3R 24478703 24478842 + 15 NA Intergenic Intergenic -2570 FBgn0051050 FBgn0051050 FBtr0085317 CG31050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7477 chr3L 9042071 9042244 + 15 NA TTS (FBgn0035957) protein_coding-TTS (FBgn0035957) 1618 FBgn0035957 FBgn0035957 FBtr0076523 CG5144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3540 chr2L 21963216 21963395 + 15 NA Intergenic Intergenic 29628 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3778 chr2L 22614795 22614872 + 15 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 29694 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9545 chr3R 5055188 5055421 + 15 NA intron (FBgn0003165, intron 3 of 12) protein_coding-intron (FBgn0003165, intron 3 of 12) 10685 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11955 chr3R 23677855 23677909 + 15 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) 6210 FBgn0039551 FBgn0039551 FBtr0085226 Or98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5602 chr2R 15434213 15434269 + 15 NA exon (FBgn0003435, exon 1 of 6) protein_coding-exon (FBgn0003435, exon 1 of 6) -5335 FBgn0262571 FBgn0262571 FBtr0304898 CG43111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2828 chr2L 18063258 18063459 + 15 NA intron (FBgn0243486, intron 5 of 14) protein_coding-intron (FBgn0243486, intron 5 of 14) -14911 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1084 chr2L 8499810 8499882 + 15 NA intron (FBgn0032048, intron 2 of 3) protein_coding-intron (FBgn0032048, intron 2 of 4) -3539 FBgn0032049 FBgn0032049 FBtr0079701 Bace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9279 chr3R 2843650 2843830 + 15 NA Intergenic Intergenic -34317 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13494 chrX 2650240 2650445 + 15 NA intron (FBgn0028369, intron 2 of 11) protein_coding-intron (FBgn0028369, intron 2 of 12) -4893 FBgn0263505 FBgn0263505 FBtr0309525 CR43494 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9644 chr3R 5888193 5888359 + 15 NA promoter-TSS (FBgn0053630) protein_coding-promoter-TSS (FBgn0053630) -70 FBgn0053630 FBgn0053630 FBtr0091607 CG33630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4132 chr2R 3219462 3219556 + 15 NA exon (FBgn0033159, exon 11 of 24) protein_coding-exon (FBgn0033159, exon 11 of 24) 20596 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12419 chr3R 25529085 25529407 + 15 NA Intergenic Intergenic 10933 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2603 chr2L 17094902 17094956 + 15 NA Intergenic Intergenic 7288 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5977 chr2R 18357407 18357633 + 15 NA exon (FBgn0034731, exon 3 of 6) protein_coding-exon (FBgn0034731, exon 3 of 6) 3526 FBgn0034731 FBgn0034731 FBtr0300683 CG10384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11110 chr3R 16353039 16353108 + 15 NA Intergenic Intergenic 7353 FBgn0262146 FBgn0262146 FBtr0304129 MtnE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6941 chr3L 2684613 2684704 + 15 NA exon (FBgn0264606, exon 4 of 18) protein_coding-exon (FBgn0264606, exon 4 of 18) 23036 FBgn0053234 FBgn0053234 FBtr0290142 CG33234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12007 chr3R 23918337 23918551 + 15 NA Intergenic Intergenic -54158 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9453 chr3R 4162611 4162665 + 15 NA Intergenic Intergenic -3124 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_801 chr2L 5691062 5691167 + 15 NA Intergenic Intergenic 12476 FBgn0031729 FBgn0031729 FBtr0305128 CG12511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_176 chr2L 1209183 1209299 + 15 NA Intergenic Intergenic 5000 FBgn0031324 FBgn0031324 FBtr0114498 CG14342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5138 chr2R 10990023 10990235 + 15 NA Intergenic Intergenic -12633 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_697 chr2L 4811461 4811570 + 15 NA Intergenic Intergenic -1494 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9000 chr3R 781736 781902 + 15 NA promoter-TSS (FBgn0037288) protein_coding-promoter-TSS (FBgn0037288) -845 FBgn0037288 FBgn0037288 FBtr0305965 CG14661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11930 chr3R 23599041 23599206 + 15 NA intron (FBgn0085382, intron 11 of 11) protein_coding-intron (FBgn0085382, intron 11 of 11) 36861 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3178 chr2L 20256218 20256362 + 15 NA exon (FBgn0259998, exon 1 of 1) protein_coding-exon (FBgn0259998, exon 1 of 1) 745 FBgn0259998 FBgn0259998 FBtr0081376 CG17571 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8020 chr3L 14165177 14165240 + 15 NA Intergenic Intergenic 6512 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1343 chr2L 9449341 9449421 + 15 NA promoter-TSS (FBgn0002973) protein_coding-promoter-TSS (FBgn0002973) -449 FBgn0002973 FBgn0002973 FBtr0079822 numb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_190 chr2L 1245471 1245529 + 15 NA Intergenic Intergenic 5462 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2708 chr2L 17610221 17610361 + 15 NA Intergenic Intergenic 15626 FBgn0261089 FBgn0261089 FBtr0303255 Sytalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2161 chr2L 15091698 15091855 + 15 NA exon (FBgn0028879, exon 9 of 17) protein_coding-exon (FBgn0028879, exon 9 of 17) 17000 FBgn0028879 FBgn0028879 FBtr0332180 CG15270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1984 chr2L 14440910 14440964 + 15 NA Intergenic Intergenic 9985 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8427 chr3L 17682774 17682858 + 15 NA promoter-TSS (FBgn0052183) protein_coding-promoter-TSS (FBgn0052183) -299 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7942 chr3L 13662002 13662092 + 15 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 48110 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1423 chr2L 10173671 10173772 + 15 NA exon (FBgn0032188, exon 1 of 1) protein_coding-exon (FBgn0032188, exon 1 of 1) 1019 FBgn0032188 FBgn0032188 FBtr0301684 CG13137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2958 chr2L 19081019 19081124 + 15 NA exon (FBgn0002023, exon 6 of 8) protein_coding-exon (FBgn0002023, exon 6 of 8) -2043 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5036 chr2R 10198210 10198411 + 15 NA intron (FBgn0085408, intron 1 of 9) protein_coding-intron (FBgn0085408, intron 1 of 9) -8452 FBgn0033921 FBgn0033921 FBtr0087562 tej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3094 chr2L 19766405 19766562 + 15 NA exon (FBgn0000529, exon 4 of 4) protein_coding-exon (FBgn0000529, exon 4 of 4) -2349 FBgn0032820 FBgn0032820 FBtr0081322 fbp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1310 chr2L 9057452 9057506 + 15 NA intron (FBgn0051708, intron 6 of 9) protein_coding-intron (FBgn0051708, intron 6 of 9) 13683 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9879 chr3R 7866771 7866945 + 15 NA exon (FBgn0037986, exon 3 of 10) protein_coding-exon (FBgn0037986, exon 3 of 10) 608 FBgn0037986 FBgn0037986 FBtr0301724 CG14736 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_568 chr2L 3931614 3931875 + 15 NA intron (FBgn0051774, intron 3 of 9) protein_coding-intron (FBgn0051774, intron 3 of 8) -17456 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2614 chr2L 17133611 17133709 + 15 NA promoter-TSS (FBgn0032627) protein_coding-promoter-TSS (FBgn0032627) 42 FBgn0032627 FBgn0032627 FBtr0303301 beat-IIIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1659 chr2L 12587388 12587738 + 15 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -30785 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2846 chr2L 18104589 18104774 + 15 NA Intergenic Intergenic 8113 FBgn0032664 FBgn0032664 FBtr0081033 CG5755 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10868 chr3R 14841122 14841176 + 15 NA intron (FBgn0026239, intron 4 of 4) protein_coding-intron (FBgn0026239, intron 4 of 4) 8595 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3886 chr2LHet 258298 258670 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9709 chr3R 6433303 6433393 + 15 NA intron (FBgn0001235, intron 1 of 5) protein_coding-intron (FBgn0001235, intron 1 of 12) -1956 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12161 chr3R 24502279 24502471 + 15 NA intron (FBgn0039594, intron 1 of 9) protein_coding-intron (FBgn0039594, intron 1 of 9) -5688 FBgn0039594 FBgn0039594 FBtr0305087 CG9990 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5107 chr2R 10724228 10724282 + 15 NA Intergenic Intergenic 3917 FBgn0033970 FBgn0033970 FBtr0087447 CG10205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7283 chr3L 7086605 7086751 + 15 NA exon (FBgn0035737, exon 2 of 2) protein_coding-exon (FBgn0035737, exon 2 of 2) 374 FBgn0035737 FBgn0035737 FBtr0076909 Cpr65Ec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11889 chr3R 23439050 23439198 + 15 NA intron (FBgn0039530, intron 1 of 10) protein_coding-intron (FBgn0039530, intron 1 of 10) 5138 FBgn0039530 FBgn0039530 FBtr0302589 Tusp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8844 chr3LHet 235168 235238 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12506 chr3R 26008075 26008129 + 15 NA Intergenic Intergenic 2098 FBgn0260860 FBgn0260860 FBtr0085570 Bet5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13593 chrX 7241103 7241157 + 15 NA exon (FBgn0029946, exon 1 of 1) protein_coding-exon (FBgn0029946, exon 1 of 1) 409 FBgn0029946 FBgn0029946 FBtr0071064 CG15034 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3411 chr2L 21585276 21585330 + 15 NA intron (FBgn0016919, intron 4 of 6) protein_coding-intron (FBgn0016919, intron 4 of 7) 4052 FBgn0016919 FBgn0016919 FBtr0301173 nompB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13754 chrX 15254367 15254471 + 15 NA exon (FBgn0003132, exon 2 of 2) protein_coding-exon (FBgn0003132, exon 2 of 2) 675 FBgn0003132 FBgn0003132 FBtr0074017 Pp1-13C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10361 chr3R 11599965 11600082 + 15 NA promoter-TSS (FBgn0038358) protein_coding-promoter-TSS (FBgn0038358) -74 FBgn0038358 FBgn0038358 FBtr0083170 CG4525 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11994 chr3R 23880049 23880103 + 15 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 27742 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9629 chr3R 5745685 5745739 + 15 NA intron (FBgn0263097, intron 1 of 6) protein_coding-intron (FBgn0263097, intron 1 of 6) 45309 FBgn0263097 FBgn0263097 FBtr0114583 Glut4EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13316 chrUextra 503398 503502 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1784 chr2L 13311378 13311626 + 15 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) -4747 FBgn0264301 FBgn0264301 FBtr0331506 CG43779 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12016 chr3R 23954002 23954143 + 15 NA Intergenic Intergenic -18530 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10931 chr3R 15410507 15410869 + 15 NA intron (FBgn0260003, intron 1 of 10) protein_coding-intron (FBgn0260003, intron 26 of 34) -1230 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6472 chr2RHet 1449681 1449828 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7361 chr3L 8028138 8028205 + 15 NA intron (FBgn0011817, intron 3 of 8) protein_coding-intron (FBgn0011817, intron 3 of 9) -6453 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11850 chr3R 23259992 23260236 + 15 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 3090 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10319 chr3R 11391735 11391918 + 15 NA Intergenic Intergenic -13332 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9340 chr3R 3213416 3213757 + 15 NA Intergenic Intergenic -3618 FBgn0261502 FBgn0261502 FBtr0302394 CG42650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3592 chr2L 22056227 22056281 + 15 NA Intergenic Intergenic -2009 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8169 chr3L 15746998 15747287 + 15 NA Intergenic Intergenic -25612 FBgn0010105 FBgn0010105 FBtr0075579 comm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10575 chr3R 12801020 12801099 + 15 NA TTS (FBgn0015008) protein_coding-TTS (FBgn0015008) 133 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13585 chrX 7165589 7165643 + 15 NA Intergenic Intergenic 4679 FBgn0029940 FBgn0029940 FBtr0071046 CG1958 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_839 chr2L 5941548 5941618 + 15 NA Intergenic Intergenic 1680 FBgn0261055 FBgn0261055 FBtr0301935 Sfp26Ad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5097 chr2R 10681613 10681774 + 15 NA intron (FBgn0001319, intron 1 of 10) protein_coding-intron (FBgn0001319, intron 1 of 10) 2839 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9882 chr3R 7887624 7887678 + 15 NA exon (FBgn0037988, exon 3 of 5) protein_coding-exon (FBgn0037988, exon 3 of 5) 1015 FBgn0037988 FBgn0037988 FBtr0082552 CG14740 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8768 chr3L 23704496 23704754 + 15 NA Intergenic Intergenic -3766 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13176 chrU 1589075 1589229 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10042 chr3R 9078419 9078732 + 15 NA intron (FBgn0000024, intron 2 of 10) protein_coding-intron (FBgn0000024, intron 1 of 9) 6665 FBgn0000024 FBgn0000024 FBtr0082780 Ace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10439 chr3R 12006322 12006416 + 15 NA promoter-TSS (FBgn0038405) protein_coding-promoter-TSS (FBgn0038405) -375 FBgn0038405 FBgn0038405 FBtr0100110 CG8927 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3216 chr2L 20480997 20481140 + 15 NA Intergenic Intergenic -3519 FBgn0262879 FBgn0262879 FBtr0306286 CG43234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_950 chr2L 6984359 6984789 + 15 NA exon (FBgn0031879, exon 5 of 12) protein_coding-exon (FBgn0031879, exon 5 of 12) 12331 FBgn0262616 FBgn0262616 FBtr0305347 CR43142 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_9989 chr3R 8689912 8690031 + 15 NA Intergenic Intergenic -5032 FBgn0038088 FBgn0038088 FBtr0082686 CG10126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4710 chr2R 7592347 7592401 + 15 NA Intergenic Intergenic -2420 FBgn0033648 FBgn0033648 FBtr0088080 Ir48b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7568 chr3L 10594324 10594451 + 15 NA Intergenic Intergenic 22289 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2281 chr2L 15527048 15527314 + 15 NA Intergenic Intergenic 4743 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1417 chr2L 10114475 10114549 + 15 NA intron (FBgn0083945, intron 8 of 12) protein_coding-intron (FBgn0083945, intron 8 of 12) 8259 FBgn0032184 FBgn0032184 FBtr0079966 CG13135 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9231 chr3R 2618249 2618442 + 15 NA exon (FBgn0000439, exon 1 of 5) protein_coding-exon (FBgn0000439, exon 1 of 5) 787 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13632 chrX 9586810 9586910 + 15 NA Intergenic Intergenic -1361 FBgn0000233 FBgn0000233 FBtr0071379 btd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9619 chr3R 5642532 5642663 + 15 NA TTS (FBgn0037764) protein_coding-TTS (FBgn0037764) 111 FBgn0037763 FBgn0037763 FBtr0082154 CG16904 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1204 chr2L 8800988 8801042 + 15 NA Intergenic Intergenic -8385 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_407 chr2L 2547423 2547477 + 15 NA Intergenic Intergenic 5394 FBgn0031431 FBgn0031431 FBtr0077750 CG3515 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12973 chr4 858820 858913 + 15 NA exon (FBgn0039937, exon 2 of 2) protein_coding-exon (FBgn0039937, exon 2 of 2) -4227 FBgn0039938 FBgn0039938 FBtr0089252 Sox102F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11927 chr3R 23590035 23590089 + 15 NA Intergenic Intergenic 27800 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13430 chrX 1302998 1303071 + 15 NA promoter-TSS (FBgn0259108) protein_coding-promoter-TSS (FBgn0259108) -68 FBgn0259108 FBgn0259108 FBtr0112628 futsch protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11148 chr3R 16690318 16690372 + 15 NA intron (FBgn0038837, intron 2 of 12) protein_coding-intron (FBgn0038837, intron 2 of 12) 1606 FBgn0038837 FBgn0038837 FBtr0083987 CG3822 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9381 chr3R 3647098 3647306 + 15 NA promoter-TSS (FBgn0085413) protein_coding-promoter-TSS (FBgn0085413) 7119 FBgn0085413 FBgn0085413 FBtr0302036 CG34384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12874 chr3RHet 1675321 1675375 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5199 chr2R 11540152 11540408 + 15 NA Intergenic Intergenic -4347 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8789 chr3L 23813575 23813671 + 15 NA Intergenic Intergenic 36292 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8384 chr3L 17371432 17371543 + 15 NA exon (FBgn0036715, exon 2 of 9) protein_coding-exon (FBgn0036715, exon 2 of 9) 1143 FBgn0036715 FBgn0036715 FBtr0309231 Cad74A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10259 chr3R 10893484 10893629 + 15 NA intron (FBgn0038282, intron 3 of 7) protein_coding-intron (FBgn0038282, intron 3 of 7) 9371 FBgn0038282 FBgn0038282 FBtr0089376 dpr9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11531 chr3R 21856437 21856491 + 15 NA Intergenic Intergenic -1007 FBgn0002631 FBgn0002631 FBtr0084979 HLHm5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6565 chr2RHet 1944315 1944785 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4387 chr2R 4970790 4971051 + 15 NA exon (FBgn0033371, exon 3 of 7) protein_coding-exon (FBgn0033371, exon 3 of 7) 978 FBgn0033371 FBgn0033371 FBtr0300173 CNT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8362 chr3L 17262828 17262882 + 15 NA Intergenic Intergenic 5339 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3126 chr2L 19929262 19929416 + 15 NA exon (FBgn0263873, exon 12 of 16) protein_coding-exon (FBgn0263873, exon 12 of 16) 6338 FBgn0264375 FBgn0264375 FBtr0332241 CR43827 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2710 chr2L 17612597 17612693 + 15 NA Intergenic Intergenic 13701 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4846 chr2R 8664341 8664586 + 15 NA Intergenic Intergenic -3586 FBgn0003326 FBgn0003326 FBtr0087855 sca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1233 chr2L 8852925 8853115 + 15 NA Intergenic Intergenic -9756 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9612 chr3R 5557166 5557494 + 15 NA exon (FBgn0003886, exon 3 of 3) protein_coding-exon (FBgn0003886, exon 3 of 3) 1657 FBgn0003886 FBgn0003886 FBtr0082087 alphaTub85E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2118 chr2L 14914554 14914654 + 15 NA intron (FBgn0259213, intron 15 of 19) protein_coding-intron (FBgn0259213, intron 15 of 19) -10131 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13135 chrU 955023 955092 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_527 chr2L 3599026 3599080 + 15 NA Intergenic Intergenic 7695 FBgn0002985 FBgn0002985 FBtr0077557 odd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_835 chr2L 5933645 5933857 + 15 NA intron (FBgn0015381, intron 3 of 4) protein_coding-intron (FBgn0015381, intron 3 of 4) -7790 FBgn0264547 FBgn0264547 FBtr0333246 CR43926 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11402 chr3R 19801938 19802049 + 15 NA exon (FBgn0051140, exon 9 of 17) protein_coding-exon (FBgn0051140, exon 9 of 17) -7232 FBgn0051451 FBgn0051451 FBtr0308922 CR31451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5077 chr2R 10552164 10552516 + 15 NA TTS (FBgn0033954) protein_coding-TTS (FBgn0033954) 516 FBgn0033953 FBgn0033953 FBtr0087481 CG12861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9305 chr3R 3061073 3061132 + 15 NA intron (FBgn0037487, intron 2 of 5) protein_coding-intron (FBgn0037487, intron 2 of 5) -6380 FBgn0037488 FBgn0037488 FBtr0303218 CG14607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8095 chr3L 14914426 14914573 + 15 NA promoter-TSS (FBgn0259099) protein_coding-promoter-TSS (FBgn0259099) 17594 FBgn0259099 FBgn0259099 FBtr0330139 DCX-EMAP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9692 chr3R 6337080 6337205 + 15 NA exon (FBgn0001235, exon 12 of 12) protein_coding-exon (FBgn0001235, exon 12 of 12) 1636 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_9567 chr3R 5123160 5123318 + 15 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -24253 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11072 chr3R 16168571 16168769 + 15 NA exon (FBgn0038789, exon 6 of 8) protein_coding-exon (FBgn0038789, exon 6 of 8) 3681 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12127 chr3R 24350384 24350542 + 15 NA exon (FBgn0003137, exon 9 of 18) protein_coding-exon (FBgn0003137, exon 9 of 18) -4226 FBgn0051051 FBgn0051051 FBtr0085296 CG31051 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_117 chr2L 931151 931484 + 15 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 8524 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11545 chr3R 21906208 21906273 + 15 NA intron (FBgn0039411, intron 6 of 10) protein_coding-intron (FBgn0039411, intron 6 of 10) -17507 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2023 chr2L 14571851 14572043 + 15 NA Intergenic Intergenic -8221 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13626 chrX 9394597 9394651 + 15 NA promoter-TSS (FBgn0261260) protein_coding-promoter-TSS (FBgn0261260) -4403 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_846 chr2L 6033871 6034040 + 15 NA TTS (FBgn0025742) protein_coding-TTS (FBgn0025742) 468 FBgn0031765 FBgn0031765 FBtr0100665 CG9109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5195 chr2R 11514815 11514966 + 15 NA intron (FBgn0260429, intron 1 of 4) protein_coding-intron (FBgn0260429, intron 1 of 3) 13283 FBgn0260429 FBgn0260429 FBtr0304712 CG42524 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2485 chr2L 16554743 16554997 + 15 NA intron (FBgn0259735, intron 1 of 4) protein_coding-intron (FBgn0259735, intron 1 of 2) -4911 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8848 chr3LHet 390937 391117 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4178 chr2R 3460521 3460693 + 15 NA exon (FBgn0033194, exon 12 of 30) protein_coding-exon (FBgn0033194, exon 12 of 30) 6271 FBgn0033194 FBgn0033194 FBtr0310024 Vps13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6201 chr2R 20305227 20305281 + 15 NA exon (FBgn0259210, exon 12 of 16) protein_coding-exon (FBgn0259210, exon 12 of 16) 5840 FBgn0035002 FBgn0035002 FBtr0072291 CG3419 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_600 chr2L 4178444 4178561 + 15 NA Intergenic Intergenic 9287 FBgn0051961 FBgn0051961 FBtr0077485 CG31961 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4829 chr2R 8430014 8430113 + 15 NA intron (FBgn0011592, intron 1 of 9) protein_coding-intron (FBgn0011592, intron 1 of 9) -3131 FBgn0053752 FBgn0053752 FBtr0091753 CG33752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_90 chr2L 797046 797100 + 15 NA Intergenic Intergenic -6275 FBgn0000442 FBgn0000442 FBtr0078042 Pkg21D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11404 chr3R 19809234 19809294 + 15 NA promoter-TSS (FBgn0051451) ncRNA-promoter-TSS (FBgn0051451) 39 FBgn0051451 FBgn0051451 FBtr0308922 CR31451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5898 chr2R 17685304 17685440 + 15 NA TTS (FBgn0042098) protein_coding-TTS (FBgn0042098) 1299 FBgn0042098 FBgn0042098 FBtr0071744 CG18735 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2147 chr2L 15016932 15016995 + 15 NA promoter-TSS (FBgn0260446) protein_coding-promoter-TSS (FBgn0260446) -191 FBgn0260446 FBgn0260446 FBtr0304731 GABA-B-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4671 chr2R 7364511 7364749 + 15 NA exon (FBgn0001269, exon 2 of 6) protein_coding-exon (FBgn0001269, exon 2 of 6) 1420 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8277 chr3L 16550204 16550369 + 15 NA exon (FBgn0036639, exon 2 of 2) protein_coding-exon (FBgn0036639, exon 2 of 2) 363 FBgn0036639 FBgn0036639 FBtr0075392 CG4229 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10691 chr3R 13695897 13696262 + 15 NA exon (FBgn0261649, exon 10 of 10) protein_coding-exon (FBgn0261649, exon 10 of 10) -36107 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1174 chr2L 8762730 8762878 + 15 NA Intergenic Intergenic 5904 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4317 chr2R 4677210 4677322 + 15 NA Intergenic Intergenic -2872 FBgn0033330 FBgn0033330 FBtr0088714 CG8746 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9733 chr3R 6541018 6541117 + 15 NA exon (FBgn0037827, exon 1 of 1) protein_coding-exon (FBgn0037827, exon 1 of 1) 547 FBgn0037827 FBgn0037827 FBtr0082269 CG4073 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10713 chr3R 13847264 13847340 + 15 NA promoter-TSS (FBgn0038564) protein_coding-promoter-TSS (FBgn0038564) -20 FBgn0038564 FBgn0038564 FBtr0083539 CG7785 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2332 chr2L 15805193 15805305 + 15 NA Intergenic Intergenic 6892 FBgn0262150 FBgn0262150 FBtr0304142 CG42876 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9973 chr3R 8605015 8605157 + 15 NA Intergenic Intergenic -1212 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3973 chr2R 867947 868001 + 15 NA intron (FBgn0040849, intron 2 of 4) protein_coding-intron (FBgn0040849, intron 2 of 4) 30802 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4709 chr2R 7571335 7571389 + 15 NA TTS (FBgn0033645) protein_coding-TTS (FBgn0033645) 2575 FBgn0033645 FBgn0033645 FBtr0088084 CG13196 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3967 chr2R 855517 855571 + 15 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 18372 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1359 chr2L 9582034 9582123 + 15 NA promoter-TSS (FBgn0014179) protein_coding-promoter-TSS (FBgn0014179) -336 FBgn0014179 FBgn0014179 FBtr0079855 gcm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_560 chr2L 3827493 3827547 + 15 NA TTS (FBgn0003430) protein_coding-TTS (FBgn0003430) 1840 FBgn0003430 FBgn0003430 FBtr0077499 slp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5650 chr2R 15757257 15757656 + 15 NA Intergenic Intergenic 5234 FBgn0043532 FBgn0043532 FBtr0086337 Obp56i protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7561 chr3L 10582535 10582589 + 15 NA exon (FBgn0052062, exon 13 of 15) protein_coding-exon (FBgn0052062, exon 13 of 15) -30380 FBgn0036085 FBgn0036085 FBtr0076291 CG6527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8636 chr3L 21290447 21290501 + 15 NA TTS (FBgn0037068) protein_coding-TTS (FBgn0037068) 429 FBgn0000551 FBgn0000551 FBtr0078408 Edg78E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7912 chr3L 13418369 13418423 + 15 NA TTS (FBgn0036359) protein_coding-TTS (FBgn0036359) 375 FBgn0260459 FBgn0260459 FBtr0075858 CG14106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9997 chr3R 8757339 8757518 + 15 NA exon (FBgn0038092, exon 4 of 7) protein_coding-exon (FBgn0038092, exon 4 of 7) 15584 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9496 chr3R 4470953 4471101 + 15 NA exon (FBgn0037601, exon 1 of 7) protein_coding-exon (FBgn0037601, exon 1 of 7) 152 FBgn0037601 FBgn0037601 FBtr0081893 Cyp313b1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2722 chr2L 17661210 17661465 + 15 NA exon (FBgn0015609, exon 16 of 22) protein_coding-exon (FBgn0015609, exon 16 of 22) 33478 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7789 chr3L 12489030 12489228 + 15 NA intron (FBgn0036289, intron 1 of 3) protein_coding-intron (FBgn0036289, intron 1 of 3) 1187 FBgn0036289 FBgn0036289 FBtr0075975 CG10657 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_995 chr2L 7388724 7388778 + 15 NA promoter-TSS (FBgn0031904) protein_coding-promoter-TSS (FBgn0031904) 214 FBgn0031905 FBgn0031905 FBtr0079438 CG5155 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8968 chr3R 552093 552362 + 15 NA intron (FBgn0027570, intron 1 of 8) protein_coding-intron (FBgn0027570, intron 1 of 8) 5373 FBgn0027570 FBgn0027570 FBtr0305133 Nep2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11740 chr3R 22735264 22735379 + 15 NA exon (FBgn0004359, exon 3 of 3) protein_coding-exon (FBgn0004359, exon 3 of 3) 3287 FBgn0004510 FBgn0004510 FBtr0330167 Ets97D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_300 chr2L 1566319 1566449 + 15 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 11254 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6602 chr2RHet 2139398 2139599 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7519 chr3L 9961496 9961564 + 15 NA promoter-TSS (FBgn0026404) protein_coding-promoter-TSS (FBgn0026404) -49 FBgn0026404 FBgn0026404 FBtr0076347 Nc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2182 chr2L 15172176 15172388 + 15 NA intron (FBgn0028888, intron 2 of 5) protein_coding-intron (FBgn0028888, intron 2 of 5) 28127 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9801 chr3R 7143580 7143653 + 15 NA Intergenic Intergenic -12286 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8882 chr3LHet 1077552 1077981 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7066 chr3L 4883487 4883541 + 15 NA exon (FBgn0035581, exon 31 of 52) protein_coding-exon (FBgn0035581, exon 31 of 52) -13350 FBgn0035582 FBgn0035582 FBtr0073352 CG13705 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5527 chr2R 14648142 14648338 + 15 NA promoter-TSS (FBgn0259682) protein_coding-promoter-TSS (FBgn0259682) 347 FBgn0259682 FBgn0259682 FBtr0299942 CG42351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_118 chr2L 932351 932514 + 15 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 9639 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2367 chr2L 15943545 15943919 + 15 NA TTS (FBgn0028857) protein_coding-TTS (FBgn0028857) 2291 FBgn0028857 FBgn0028857 FBtr0300613 CG12448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_254 chr2L 1419564 1419618 + 15 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 858 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3777 chr2L 22613590 22613768 + 15 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 30848 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5418 chr2R 13700847 13701069 + 15 NA promoter-TSS (FBgn0259211) protein_coding-promoter-TSS (FBgn0259211) -10112 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2256 chr2L 15460531 15460681 + 15 NA Intergenic Intergenic 17663 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7011 chr3L 3880557 3880722 + 15 NA Intergenic Intergenic 4162 FBgn0264518 FBgn0264518 FBtr0333143 CR43917 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1736 chr2L 12913203 12913271 + 15 NA exon (FBgn0040508, exon 4 of 12) protein_coding-exon (FBgn0040508, exon 4 of 12) 707 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1481 chr2L 10898361 10898480 + 15 NA Intergenic Intergenic 3345 FBgn0032313 FBgn0032313 FBtr0080177 CG14070 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6747 chr3L 624738 624988 + 15 NA Intergenic Intergenic -2547 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10173 chr3R 10088809 10088891 + 15 NA promoter-TSS (FBgn0038218) protein_coding-promoter-TSS (FBgn0038218) -710 FBgn0038218 FBgn0038218 FBtr0082951 CG14841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13667 chrX 12444984 12445078 + 15 NA intron (FBgn0264542, intron 4 of 10) protein_coding-intron (FBgn0264542, intron 4 of 10) -2126 FBgn0030398 FBgn0030398 FBtr0333157 Cpr11B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12459 chr3R 25666679 25666834 + 15 NA promoter-TSS (FBgn0039709) protein_coding-promoter-TSS (FBgn0039709) -623 FBgn0039709 FBgn0039709 FBtr0085488 Cad99C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4452 chr2R 5588034 5588088 + 15 NA Intergenic Intergenic -3828 FBgn0260474 FBgn0260474 FBtr0302050 CG30002 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7658 chr3L 11454668 11454749 + 15 NA Intergenic Intergenic 3118 FBgn0036161 FBgn0036161 FBtr0076176 CG7551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1975 chr2L 14425672 14425830 + 15 NA promoter-TSS (FBgn0028871) protein_coding-promoter-TSS (FBgn0028871) -620 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12126 chr3R 24348600 24348655 + 15 NA exon (FBgn0003137, exon 8 of 12) protein_coding-exon (FBgn0003137, exon 8 of 12) -2390 FBgn0051051 FBgn0051051 FBtr0085296 CG31051 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8081 chr3L 14699681 14699924 + 15 NA promoter-TSS (FBgn0259175) protein_coding-promoter-TSS (FBgn0259175) -49 FBgn0259175 FBgn0259175 FBtr0333043 ome protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11558 chr3R 21973932 21974160 + 15 NA Intergenic Intergenic 15170 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7609 chr3L 10746044 10746127 + 15 NA Intergenic Intergenic -19007 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11575 chr3R 22078327 22078404 + 15 NA exon (FBgn0261708, exon 3 of 3) ncRNA-exon (FBgn0261708, exon 3 of 3) 8948 FBgn0000064 FBgn0000064 FBtr0085000 Ald protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1901 chr2L 14257667 14258066 + 15 NA Intergenic Intergenic -5161 FBgn0261563 FBgn0261563 FBtr0302735 wb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1728 chr2L 12869264 12869419 + 15 NA Intergenic Intergenic -43189 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2205 chr2L 15238079 15238226 + 15 NA intron (FBgn0028516, intron 3 of 6) protein_coding-intron (FBgn0028516, intron 5 of 8) 7766 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4131 chr2R 3218623 3218754 + 15 NA exon (FBgn0033159, exon 11 of 24) protein_coding-exon (FBgn0033159, exon 11 of 24) 19775 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10165 chr3R 9957731 9957922 + 15 NA promoter-TSS (FBgn0038207) protein_coding-promoter-TSS (FBgn0038207) -35 FBgn0038207 FBgn0038207 FBtr0082908 CG14356 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6724 chr3L 496294 496435 + 15 NA intron (FBgn0001316, intron 4 of 18) protein_coding-intron (FBgn0001316, intron 5 of 18) 4087 FBgn0085296 FBgn0085296 FBtr0112462 CG34267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10161 chr3R 9926502 9926579 + 15 NA exon (FBgn0038201, exon 3 of 4) protein_coding-exon (FBgn0038201, exon 3 of 4) 2304 FBgn0038201 FBgn0038201 FBtr0100131 Pk1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7631 chr3L 10989014 10989116 + 15 NA intron (FBgn0013469, intron 2 of 2) protein_coding-intron (FBgn0013469, intron 2 of 2) 5524 FBgn0086077 FBgn0086077 FBtr0114353 snoRNA:Me18S-G962 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2355 chr2L 15890846 15890953 + 15 NA exon (FBgn0041183, exon 8 of 9) protein_coding-exon (FBgn0041183, exon 8 of 9) 2912 FBgn0041183 FBgn0041183 FBtr0080811 TepI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7078 chr3L 5240009 5240202 + 15 NA intron (FBgn0052423, intron 2 of 11) protein_coding-intron (FBgn0052423, intron 2 of 10) 12522 FBgn0035598 FBgn0035598 FBtr0077171 CG4669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3820 chr2L 22716635 22716786 + 15 NA Intergenic Intergenic 19587 FBgn0262947 FBgn0262947 FBtr0306552 CG43266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8291 chr3L 16740563 16740761 + 15 NA Intergenic Intergenic -7927 FBgn0262099 FBgn0262099 FBtr0304017 CG42852 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4968 chr2R 9572591 9572676 + 15 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 8241 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6469 chr2RHet 1443640 1443759 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12129 chr3R 24358065 24358461 + 15 NA intron (FBgn0003137, intron 1 of 16) protein_coding-intron (FBgn0003137, intron 1 of 11) 7790 FBgn0003137 FBgn0003137 FBtr0301839 Ppn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8920 chr3LHet 2199437 2199661 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11701 chr3R 22530222 22530370 + 15 NA intron (FBgn0023179, intron 1 of 11) protein_coding-intron (FBgn0023179, intron 1 of 11) 9585 FBgn0023179 FBgn0023179 FBtr0085048 amon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3503 chr2L 21873370 21873549 + 15 NA Intergenic Intergenic -20768 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11150 chr3R 16701772 16701983 + 15 NA Intergenic Intergenic -1581 FBgn0044809 FBgn0044809 FBtr0083974 TotZ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3345 chr2L 21093068 21093178 + 15 NA intron (FBgn0032914, intron 1 of 2) protein_coding-intron (FBgn0032914, intron 1 of 2) 1896 FBgn0032914 FBgn0032914 FBtr0300444 CG14397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2211 chr2L 15250453 15250507 + 15 NA intron (FBgn0028862, intron 1 of 5) protein_coding-intron (FBgn0028862, intron 1 of 5) 1595 FBgn0028862 FBgn0028862 FBtr0080707 dao protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5467 chr2R 14103186 14103593 + 15 NA Intergenic Intergenic 8129 FBgn0050114 FBgn0050114 FBtr0086753 CG30114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4450 chr2R 5545784 5545838 + 15 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) -2919 FBgn0011921 FBgn0011921 FBtr0088465 tRNA:M3:46A tRNA Nup98-S2-pascual-garcia2017_R1_peak_11257 chr3R 17629602 17629960 + 15 NA exon (FBgn0013759, exon 2 of 13) protein_coding-exon (FBgn0013759, exon 2 of 13) -5503 FBgn0263521 FBgn0263521 FBtr0309593 mir-4969 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11919 chr3R 23563676 23563764 + 15 NA intron (FBgn0005659, intron 1 of 4) protein_coding-intron (FBgn0005659, intron 1 of 4) 1458 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12032 chr3R 24010402 24010480 + 15 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 37839 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3196 chr2L 20381881 20382179 + 15 NA exon (FBgn0032856, exon 1 of 6) protein_coding-exon (FBgn0032856, exon 1 of 6) 325 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_246 chr2L 1408063 1408351 + 15 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 12242 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11631 chr3R 22257006 22257166 + 15 NA Intergenic Intergenic 2774 FBgn0263382 FBgn0263382 FBtr0309068 CR43434 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7913 chr3L 13424979 13425103 + 15 NA intron (FBgn0036360, intron 1 of 2) protein_coding-intron (FBgn0036360, intron 1 of 2) -1107 FBgn0012010 FBgn0012010 FBtr0075847 tRNA:V4:70BCb tRNA Nup98-S2-pascual-garcia2017_R1_peak_10709 chr3R 13835711 13835765 + 15 NA exon (FBgn0263995, exon 8 of 12) protein_coding-exon (FBgn0263995, exon 8 of 12) -9359 FBgn0000477 FBgn0000477 FBtr0083538 DNaseII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2040 chr2L 14622716 14622794 + 15 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 6486 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1766 chr2L 13097133 13097554 + 15 NA Intergenic Intergenic -9528 FBgn0032470 FBgn0032470 FBtr0301366 CG5142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7299 chr3L 7297060 7297240 + 15 NA intron (FBgn0035756, intron 2 of 12) protein_coding-intron (FBgn0035756, intron 2 of 12) 8846 FBgn0035756 FBgn0035756 FBtr0290001 unc-13-4A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7617 chr3L 10838008 10838076 + 15 NA Intergenic Intergenic -13462 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6672 chr2RHet 2590754 2590808 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9391 chr3R 3690995 3691157 + 15 NA exon (FBgn0037525, exon 8 of 15) protein_coding-exon (FBgn0037525, exon 8 of 15) 21379 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5882 chr2R 17480247 17480612 + 15 NA Intergenic Intergenic 2538 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8834 chr3L 24205780 24205964 + 15 NA intron (FBgn0011288, intron 5 of 6) protein_coding-intron (FBgn0011288, intron 5 of 7) -112095 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12063 chr3R 24115598 24115783 + 15 NA Intergenic Intergenic -1370 FBgn0002865 FBgn0002865 FBtr0085277 Mst98Ca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9776 chr3R 6907981 6908035 + 15 NA Intergenic Intergenic -6134 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12213 chr3R 24613572 24613626 + 15 NA Intergenic Intergenic -1740 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7862 chr3L 13073412 13073585 + 15 NA TTS (FBgn0263661) ncRNA-TTS (FBgn0263661) 2254 FBgn0263661 FBgn0263661 FBtr0310106 CR43652 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6774 chr3L 939596 939715 + 15 NA intron (FBgn0264574, intron 2 of 14) protein_coding-intron (FBgn0264574, intron 2 of 12) -20005 FBgn0264574 FBgn0264574 FBtr0333507 Glut1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11724 chr3R 22613254 22613337 + 15 NA Intergenic Intergenic 3235 FBgn0261861 FBgn0261861 FBtr0310470 CG42790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2187 chr2L 15189459 15189702 + 15 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 10829 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9807 chr3R 7168953 7169007 + 15 NA intron (FBgn0004595, intron 2 of 7) protein_coding-intron (FBgn0004595, intron 2 of 7) 9873 FBgn0026064 FBgn0026064 FBtr0301426 KP78a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4269 chr2R 4342561 4342749 + 15 NA TTS (FBgn0002571) protein_coding-TTS (FBgn0002571) 1518 FBgn0002569 FBgn0002569 FBtr0088747 Mal-A2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5760 chr2R 16688630 16688684 + 15 NA Intergenic Intergenic 8185 FBgn0034551 FBgn0034551 FBtr0071513 CG15225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11786 chr3R 23033585 23033748 + 15 NA Intergenic Intergenic 10030 FBgn0054006 FBgn0054006 FBtr0303711 CG34006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3217 chr2L 20481331 20481456 + 15 NA Intergenic Intergenic -3844 FBgn0262879 FBgn0262879 FBtr0306286 CG43234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10705 chr3R 13757395 13757454 + 15 NA promoter-TSS (FBgn0263995) protein_coding-promoter-TSS (FBgn0263995) -12404 FBgn0263995 FBgn0263995 FBtr0330280 cpo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9763 chr3R 6832272 6832509 + 15 NA intron (FBgn0083950, intron 1 of 13) protein_coding-intron (FBgn0083950, intron 1 of 15) 13185 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2400 chr2L 16048028 16048362 + 15 NA exon (FBgn0000182, exon 11 of 11) protein_coding-exon (FBgn0000182, exon 11 of 11) -1800 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3279 chr2L 20706000 20706338 + 15 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 8247 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5 chr2L 27145 27468 + 15 NA exon (FBgn0051973, exon 11 of 13) protein_coding-exon (FBgn0051973, exon 11 of 13) -2151 FBgn0031209 FBgn0031209 FBtr0113008 Ir21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3573 chr2L 22021294 22021545 + 15 NA exon (FBgn0028979, exon 2 of 3) protein_coding-exon (FBgn0028979, exon 2 of 3) 1384 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3069 chr2L 19685996 19686057 + 15 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 14942 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_901 chr2L 6593482 6593641 + 15 NA intron (FBgn0031835, intron 1 of 15) protein_coding-intron (FBgn0031835, intron 1 of 15) 7505 FBgn0031835 FBgn0031835 FBtr0089641 CG11319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2625 chr2L 17193338 17193411 + 15 NA intron (FBgn0032629, intron 4 of 6) protein_coding-intron (FBgn0032629, intron 4 of 5) 11436 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2943 chr2L 18913583 18913690 + 15 NA Intergenic Intergenic 30312 FBgn0032723 FBgn0032723 FBtr0081193 ssp3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10394 chr3R 11889668 11889962 + 15 NA exon (FBgn0038397, exon 7 of 12) protein_coding-exon (FBgn0038397, exon 7 of 12) 3419 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3299 chr2L 20782059 20782487 + 15 NA exon (FBgn0000251, exon 2 of 2) protein_coding-exon (FBgn0000251, exon 2 of 2) -5376 FBgn0032884 FBgn0032884 FBtr0081414 Pomp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8533 chr3L 18911968 18912022 + 15 NA TTS (FBgn0036832) protein_coding-TTS (FBgn0036832) 1314 FBgn0036831 FBgn0036831 FBtr0075069 CG6839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11502 chr3R 21753854 21754073 + 15 NA intron (FBgn0039396, intron 2 of 6) protein_coding-intron (FBgn0039396, intron 2 of 6) -3160 FBgn0054024 FBgn0054024 FBtr0308933 CR34024 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9189 chr3R 2398479 2398553 + 15 NA intron (FBgn0053202, intron 1 of 7) protein_coding-intron (FBgn0053202, intron 1 of 7) -7990 FBgn0037455 FBgn0037455 FBtr0089748 CG2336 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11585 chr3R 22115903 22116053 + 15 NA Intergenic Intergenic 27594 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3477 chr2L 21818539 21818812 + 15 NA Intergenic Intergenic -9918 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4136 chr2R 3228198 3228311 + 15 NA exon (FBgn0033159, exon 9 of 24) protein_coding-exon (FBgn0033159, exon 9 of 24) 29341 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6442 chr2RHet 1264635 1264897 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13042 chrU 37235 37289 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8148 chr3L 15450506 15450702 + 15 NA Intergenic Intergenic 16606 FBgn0036496 FBgn0036496 FBtr0332815 CG7804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6181 chr2R 20216754 20216871 + 15 NA Intergenic Intergenic 5017 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6526 chr2RHet 1890586 1890868 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9188 chr3R 2371566 2371721 + 15 NA exon (FBgn0053202, exon 3 of 8) protein_coding-exon (FBgn0053202, exon 3 of 8) -3115 FBgn0046873 FBgn0046873 FBtr0081676 Pif2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1366 chr2L 9635666 9635871 + 15 NA intron (FBgn0032136, intron 1 of 19) protein_coding-intron (FBgn0032136, intron 1 of 19) 1567 FBgn0032136 FBgn0032136 FBtr0303874 CG15828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13443 chrX 1393307 1393442 + 15 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 2 of 10) 8468 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12158 chr3R 24482465 24482519 + 15 NA Intergenic Intergenic -6290 FBgn0051050 FBgn0051050 FBtr0085317 CG31050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13191 chrU 1971604 1971793 + 15 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11456 chr3R 21020591 21020645 + 15 NA promoter-TSS (FBgn0039288) protein_coding-promoter-TSS (FBgn0039288) -631 FBgn0039288 FBgn0039288 FBtr0084804 CG13653 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11819 chr3R 23184907 23185096 + 15 NA promoter-TSS (FBgn0260487) protein_coding-promoter-TSS (FBgn0260487) -111 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1482 chr2L 10918137 10918356 + 15 NA intron (FBgn0261871, intron 7 of 8) protein_coding-intron (FBgn0261871, intron 6 of 7) -7711 FBgn0032315 FBgn0032315 FBtr0080175 CG14069 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2444 chr2L 16237196 16237255 + 15 NA exon (FBgn0261999, exon 3 of 11) protein_coding-exon (FBgn0261999, exon 3 of 11) -4714 FBgn0262000 FBgn0262000 FBtr0303798 CG42818 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9366 chr3R 3492575 3492687 + 15 NA exon (FBgn0051146, exon 3 of 12) protein_coding-exon (FBgn0051146, exon 3 of 12) 8660 FBgn0051146 FBgn0051146 FBtr0305969 Nlg1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8250 chr3L 16336405 16336567 + 15 NA exon (FBgn0036612, exon 3 of 5) protein_coding-exon (FBgn0036612, exon 3 of 5) -2937 FBgn0053257 FBgn0053257 FBtr0075378 CG33257 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1907 chr2L 14276849 14277135 + 15 NA promoter-TSS (FBgn0052971) protein_coding-promoter-TSS (FBgn0052971) 2197 FBgn0052971 FBgn0052971 FBtr0080621 CG32971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11650 chr3R 22334513 22334677 + 15 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 26344 FBgn0039431 FBgn0039431 FBtr0302210 CG6490 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4807 chr2R 8188220 8188376 + 14 NA exon (FBgn0033708, exon 2 of 6) protein_coding-exon (FBgn0033708, exon 2 of 6) 1443 FBgn0033708 FBgn0033708 FBtr0087972 CG8850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1989 chr2L 14447766 14447925 + 14 NA Intergenic Intergenic 3077 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13287 chrUextra 73595 73778 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8682 chr3L 22230015 22230141 + 14 NA intron (FBgn0037153, intron 9 of 10) protein_coding-intron (FBgn0037153, intron 9 of 10) 25917 FBgn0028500 FBgn0028500 FBtr0078512 Rich protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10676 chr3R 13601853 13601907 + 14 NA exon (FBgn0262562, exon 1 of 13) protein_coding-exon (FBgn0262562, exon 1 of 13) -13677 FBgn0038542 FBgn0038542 FBtr0083532 TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3082 chr2L 19716253 19716307 + 14 NA intron (FBgn0000464, intron 12 of 18) protein_coding-intron (FBgn0000464, intron 9 of 16) -15312 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1657 chr2L 12570077 12570131 + 14 NA Intergenic Intergenic 26928 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3202 chr2L 20391224 20391389 + 14 NA intron (FBgn0032857, intron 1 of 1) protein_coding-intron (FBgn0032857, intron 1 of 1) 8088 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2833 chr2L 18074356 18074476 + 14 NA Intergenic Intergenic -3853 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10085 chr3R 9395515 9395701 + 14 NA Intergenic Intergenic -4939 FBgn0264430 FBgn0264430 FBtr0332550 CR43848 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9344 chr3R 3241799 3242032 + 14 NA Intergenic Intergenic -2805 FBgn0051544 FBgn0051544 FBtr0081532 CG31544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8931 chr3LHet 2469728 2469806 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5761 chr2R 16703187 16703282 + 14 NA Intergenic Intergenic 16685 FBgn0016984 FBgn0016984 FBtr0071563 sktl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8595 chr3L 20223566 20223695 + 14 NA TTS (FBgn0260397) protein_coding-TTS (FBgn0260397) -1139 FBgn0036956 FBgn0036956 FBtr0074827 CG13813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4785 chr2R 8017124 8017229 + 14 NA Intergenic Intergenic -9024 FBgn0033683 FBgn0033683 FBtr0087982 CG18343 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_799 chr2L 5675698 5675899 + 14 NA Intergenic Intergenic -2840 FBgn0031729 FBgn0031729 FBtr0305128 CG12511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12557 chr3R 26675348 26675402 + 14 NA Intergenic Intergenic -2662 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2879 chr2L 18302901 18303101 + 14 NA Intergenic Intergenic 5683 FBgn0263085 FBgn0263085 FBtr0307102 CG43353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2776 chr2L 17865856 17865972 + 14 NA intron (FBgn0262018, intron 1 of 14) protein_coding-intron (FBgn0262018, intron 1 of 14) 9333 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6094 chr2R 19368468 19368574 + 14 NA intron (FBgn0264339, intron 4 of 13) protein_coding-intron (FBgn0264339, intron 4 of 13) -3521 FBgn0264337 FBgn0264337 FBtr0331988 CR43793 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5912 chr2R 17817013 17817110 + 14 NA exon (FBgn0085397, exon 3 of 5) protein_coding-exon (FBgn0085397, exon 3 of 5) 7307 FBgn0263999 FBgn0263999 FBtr0334012 CG43742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11343 chr3R 18898884 18898938 + 14 NA intron (FBgn0039054, intron 10 of 10) protein_coding-intron (FBgn0039054, intron 10 of 10) -5930 FBgn0039048 FBgn0039048 FBtr0303508 CG17111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5297 chr2R 12424777 12424942 + 14 NA TTS (FBgn0259795) protein_coding-TTS (FBgn0259795) 2369 FBgn0259795 FBgn0259795 FBtr0113086 loopin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6539 chr2RHet 1908450 1908590 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9741 chr3R 6663670 6663896 + 14 NA exon (FBgn0261053, exon 2 of 12) protein_coding-exon (FBgn0261053, exon 2 of 12) 10982 FBgn0261053 FBgn0261053 FBtr0304666 Cad86C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9687 chr3R 6296308 6296508 + 14 NA Intergenic Intergenic 35897 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_782 chr2L 5583700 5583834 + 14 NA Intergenic Intergenic -2651 FBgn0031722 FBgn0031722 FBtr0079120 CG14011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3872 chr2LHet 192268 192322 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8088 chr3L 14851581 14851714 + 14 NA intron (FBgn0036454, intron 3 of 7) protein_coding-intron (FBgn0036454, intron 3 of 18) 35869 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7817 chr3L 12665409 12665868 + 14 NA Intergenic Intergenic -19448 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11787 chr3R 23038875 23038984 + 14 NA Intergenic Intergenic 4767 FBgn0054006 FBgn0054006 FBtr0303711 CG34006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7246 chr3L 6935783 6935935 + 14 NA promoter-TSS (FBgn0035719) protein_coding-promoter-TSS (FBgn0035719) -97 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13230 chrU 2649442 2649517 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_608 chr2L 4244427 4244661 + 14 NA Intergenic Intergenic -13028 FBgn0031591 FBgn0031591 FBtr0077471 CG15425 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8736 chr3L 23459696 23459785 + 14 NA Intergenic Intergenic -89285 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6899 chr3L 2179823 2179877 + 14 NA Intergenic Intergenic -5518 FBgn0035312 FBgn0035312 FBtr0072913 CG15820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4333 chr2R 4739678 4739924 + 14 NA exon (FBgn0024189, exon 21 of 21) protein_coding-exon (FBgn0024189, exon 21 of 21) -8068 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4736 chr2R 7717497 7717851 + 14 NA exon (FBgn0033654, exon 3 of 4) protein_coding-exon (FBgn0033654, exon 3 of 4) 4804 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7760 chr3L 12316825 12316897 + 14 NA Intergenic Intergenic -5471 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9127 chr3R 1916913 1916996 + 14 NA intron (FBgn0026077, intron 4 of 4) protein_coding-intron (FBgn0026077, intron 4 of 4) 9655 FBgn0026077 FBgn0026077 FBtr0078619 Gasp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4297 chr2R 4585430 4585800 + 14 NA exon (FBgn0033321, exon 2 of 2) protein_coding-exon (FBgn0033321, exon 2 of 2) 1684 FBgn0033321 FBgn0033321 FBtr0088705 CG8738 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2085 chr2L 14786473 14786664 + 14 NA Intergenic Intergenic -1982 FBgn0032551 FBgn0032551 FBtr0080688 CG18636 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4118 chr2R 3176082 3176198 + 14 NA intron (FBgn0003174, intron 3 of 10) protein_coding-intron (FBgn0003174, intron 2 of 8) 6063 FBgn0003174 FBgn0003174 FBtr0332462 pwn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13106 chrU 233359 233535 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2284 chr2L 15531795 15532107 + 14 NA Intergenic Intergenic 9513 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4626 chr2R 7043650 7043794 + 14 NA TTS (FBgn0040764) protein_coding-TTS (FBgn0040764) 1321 FBgn0040764 FBgn0040764 FBtr0088204 CG13230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10001 chr3R 8760736 8760902 + 14 NA TTS (FBgn0038092) protein_coding-TTS (FBgn0038092) 18975 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8575 chr3L 19698934 19699071 + 14 NA exon (FBgn0260653, exon 3 of 4) protein_coding-exon (FBgn0260653, exon 3 of 4) 1798 FBgn0260653 FBgn0260653 FBtr0333862 serp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_979 chr2L 7266784 7266935 + 14 NA intron (FBgn0010453, intron 1 of 3) protein_coding-intron (FBgn0010453, intron 1 of 3) 9347 FBgn0051909 FBgn0051909 FBtr0300459 CG31909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_569 chr2L 3932414 3932535 + 14 NA intron (FBgn0051774, intron 3 of 9) protein_coding-intron (FBgn0051774, intron 3 of 8) -18186 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9779 chr3R 6928223 6928297 + 14 NA Intergenic Intergenic 13168 FBgn0037860 FBgn0037860 FBtr0082380 CG6629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8177 chr3L 15837111 15837380 + 14 NA promoter-TSS (FBgn0052150) protein_coding-promoter-TSS (FBgn0052150) -398 FBgn0052150 FBgn0052150 FBtr0306853 CG32150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4631 chr2R 7121677 7121854 + 14 NA promoter-TSS (FBgn0033589) protein_coding-promoter-TSS (FBgn0033589) 257 FBgn0033588 FBgn0033588 FBtr0088106 CG13228 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11487 chr3R 21692412 21692466 + 14 NA promoter-TSS (FBgn0039380) protein_coding-promoter-TSS (FBgn0039380) -383 FBgn0039380 FBgn0039380 FBtr0301147 CG5890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5808 chr2R 17108897 17109043 + 14 NA exon (FBgn0034606, exon 5 of 8) protein_coding-exon (FBgn0034606, exon 5 of 8) -3686 FBgn0034605 FBgn0034605 FBtr0110814 CG15661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6991 chr3L 3298576 3298780 + 14 NA promoter-TSS (FBgn0262269) pre_miRNA-promoter-TSS (FBgn0262269) -394 FBgn0262269 FBgn0262269 FBtr0304379 mir-955 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1704 chr2L 12760845 12760949 + 14 NA exon (FBgn0032457, exon 2 of 2) protein_coding-exon (FBgn0032457, exon 2 of 2) 943 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_466 chr2L 3088658 3088753 + 14 NA intron (FBgn0015600, intron 4 of 8) protein_coding-intron (FBgn0015600, intron 6 of 10) 19437 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13292 chrUextra 187018 187294 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6350 chr2RHet 480613 480859 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2098 chr2L 14835763 14835858 + 14 NA Intergenic Intergenic 6284 FBgn0264349 FBgn0264349 FBtr0332019 CR43805 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2579 chr2L 17017477 17017628 + 14 NA Intergenic Intergenic -4498 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5405 chr2R 13543134 13543188 + 14 NA Intergenic Intergenic -1360 FBgn0050106 FBgn0050106 FBtr0086893 CCHa1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5196 chr2R 11523640 11523760 + 14 NA intron (FBgn0260429, intron 2 of 4) protein_coding-intron (FBgn0260429, intron 2 of 3) -20927 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5083 chr2R 10574531 10574706 + 14 NA intron (FBgn0020269, intron 1 of 5) protein_coding-intron (FBgn0020269, intron 1 of 5) -8977 FBgn0050480 FBgn0050480 FBtr0087478 CG30480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7483 chr3L 9085630 9085717 + 14 NA promoter-TSS (FBgn0043806) protein_coding-promoter-TSS (FBgn0043806) -480 FBgn0043806 FBgn0043806 FBtr0076529 CG32032 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4191 chr2R 3727714 3727905 + 14 NA intron (FBgn0085390, intron 16 of 19) protein_coding-intron (FBgn0085390, intron 6 of 9) 7938 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9180 chr3R 2317662 2317728 + 14 NA exon (FBgn0037448, exon 5 of 7) protein_coding-exon (FBgn0037448, exon 5 of 7) 4138 FBgn0011919 FBgn0011919 FBtr0081706 tRNA:M2:83F tRNA Nup98-S2-pascual-garcia2017_R1_peak_6521 chr2RHet 1881230 1881381 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9944 chr3R 8392919 8393054 + 14 NA intron (FBgn0038063, intron 1 of 6) protein_coding-intron (FBgn0038063, intron 1 of 6) -6098 FBgn0038063 FBgn0038063 FBtr0330120 Octbeta2R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_973 chr2L 7171002 7171065 + 14 NA Intergenic Intergenic -11203 FBgn0031893 FBgn0031893 FBtr0113028 CG4495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7548 chr3L 10282115 10282205 + 14 NA Intergenic Intergenic 15856 FBgn0036080 FBgn0036080 FBtr0076297 Or67d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5015 chr2R 9925021 9925075 + 14 NA intron (FBgn0002643, intron 1 of 3) protein_coding-intron (FBgn0002643, intron 3 of 6) 5864 FBgn0002643 FBgn0002643 FBtr0087598 mam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4013 chr2R 1683207 1683450 + 14 NA exon (FBgn0033042, exon 1 of 1) protein_coding-exon (FBgn0033042, exon 1 of 1) 410 FBgn0033042 FBgn0033042 FBtr0086045 Tsp42A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9190 chr3R 2399036 2399297 + 14 NA intron (FBgn0053202, intron 1 of 7) protein_coding-intron (FBgn0053202, intron 1 of 7) -7340 FBgn0037455 FBgn0037455 FBtr0089748 CG2336 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_483 chr2L 3261824 3261992 + 14 NA Intergenic Intergenic -7529 FBgn0031513 FBgn0031513 FBtr0301033 CG3347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10106 chr3R 9558656 9558746 + 14 NA intron (FBgn0085412, intron 2 of 12) protein_coding-intron (FBgn0085412, intron 2 of 12) -14803 FBgn0038175 FBgn0038175 FBtr0082838 CG9602 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3740 chr2L 22526395 22526454 + 14 NA intron (FBgn0058006, intron 9 of 9) protein_coding-intron (FBgn0058006, intron 9 of 9) 53942 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4322 chr2R 4688507 4688576 + 14 NA intron (FBgn0024189, intron 1 of 21) protein_coding-intron (FBgn0024189, intron 1 of 20) 2519 FBgn0024189 FBgn0024189 FBtr0111043 sns protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5824 chr2R 17229514 17229612 + 14 NA promoter-TSS (FBgn0034622) protein_coding-promoter-TSS (FBgn0034622) 73 FBgn0034622 FBgn0034622 FBtr0300455 CG15666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10663 chr3R 13550345 13550612 + 14 NA promoter-TSS (FBgn0016650) protein_coding-promoter-TSS (FBgn0016650) 288 FBgn0038539 FBgn0038539 FBtr0083533 Atg8b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7900 chr3L 13340683 13340737 + 14 NA Intergenic Intergenic -1555 FBgn0036348 FBgn0036348 FBtr0075838 CG17687 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12865 chr3RHet 1425387 1425441 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10101 chr3R 9460330 9460457 + 14 NA TTS (FBgn0263396) protein_coding-TTS (FBgn0263396) 2729 FBgn0038163 FBgn0038163 FBtr0309093 CG10841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4825 chr2R 8414659 8414713 + 14 NA Intergenic Intergenic -1875 FBgn0011592 FBgn0011592 FBtr0087822 fra protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11757 chr3R 22857740 22857953 + 14 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -6015 FBgn0039476 FBgn0039476 FBtr0085149 CG6271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1346 chr2L 9469592 9469747 + 14 NA promoter-TSS (FBgn0264269) ncRNA-promoter-TSS (FBgn0264269) -657 FBgn0264269 FBgn0264269 FBtr0331293 CR43769 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9341 chr3R 3223352 3223474 + 14 NA Intergenic Intergenic 6209 FBgn0261502 FBgn0261502 FBtr0302394 CG42650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8735 chr3L 23447762 23447965 + 14 NA Intergenic Intergenic -101162 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8971 chr3R 578182 578329 + 14 NA exon (FBgn0051530, exon 5 of 5) protein_coding-exon (FBgn0051530, exon 5 of 5) -3477 FBgn0026620 FBgn0026620 FBtr0089951 tacc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11874 chr3R 23340004 23340075 + 14 NA Intergenic Intergenic 2940 FBgn0039522 FBgn0039522 FBtr0085212 CG13972 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11237 chr3R 17524474 17524628 + 14 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) 20829 FBgn0051176 FBgn0051176 FBtr0084114 CG31176 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7865 chr3L 13079156 13079277 + 14 NA TTS (FBgn0036345) protein_coding-TTS (FBgn0036345) 1173 FBgn0036345 FBgn0036345 FBtr0075892 CG17300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6863 chr3L 1812010 1812140 + 14 NA intron (FBgn0027790, intron 1 of 3) protein_coding-intron (FBgn0027790, intron 1 of 4) 1487 FBgn0027790 FBgn0027790 FBtr0072785 GV1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11082 chr3R 16203192 16203246 + 14 NA Intergenic Intergenic 17189 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6372 chr2RHet 558178 558348 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7985 chr3L 13932370 13932487 + 14 NA promoter-TSS (FBgn0052137) protein_coding-promoter-TSS (FBgn0052137) 78 FBgn0052137 FBgn0052137 FBtr0075758 CG32137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4004 chr2R 1596664 1596794 + 14 NA promoter-TSS (FBgn0000099) protein_coding-promoter-TSS (FBgn0000099) 7124 FBgn0259978 FBgn0259978 FBtr0307530 vlc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10984 chr3R 15652388 15652577 + 14 NA intron (FBgn0014135, intron 2 of 4) protein_coding-intron (FBgn0014135, intron 2 of 4) 10057 FBgn0014135 FBgn0014135 FBtr0300123 bnl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_984 chr2L 7304802 7304991 + 14 NA Intergenic Intergenic -2265 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4403 chr2R 5207482 5207590 + 14 NA exon (FBgn0033403, exon 3 of 4) protein_coding-exon (FBgn0033403, exon 3 of 4) -6929 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2724 chr2L 17669339 17669433 + 14 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -35295 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12943 chr4 571694 571779 + 14 NA exon (FBgn0026869, exon 3 of 6) protein_coding-exon (FBgn0026869, exon 3 of 6) 6744 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11024 chr3R 15901214 15901302 + 14 NA Intergenic Intergenic 6914 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1993 chr2L 14455369 14455445 + 14 NA Intergenic Intergenic -4485 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7517 chr3L 9933310 9933516 + 14 NA intron (FBgn0085385, intron 2 of 19) protein_coding-intron (FBgn0085385, intron 2 of 19) 28004 FBgn0036062 FBgn0036062 FBtr0076355 CG6685 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1753 chr2L 12986939 12987048 + 14 NA Intergenic Intergenic 8207 FBgn0032464 FBgn0032464 FBtr0080421 Vha68-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1031 chr2L 7938784 7939045 + 14 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) 38151 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13438 chrX 1383406 1383793 + 14 NA intron (FBgn0053513, intron 9 of 9) protein_coding-intron (FBgn0053513, intron 9 of 10) -6546 FBgn0003517 FBgn0003517 FBtr0070291 sta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10970 chr3R 15585873 15585952 + 14 NA intron (FBgn0024963, intron 4 of 12) protein_coding-intron (FBgn0024963, intron 4 of 11) 13035 FBgn0038730 FBgn0038730 FBtr0083798 CG6300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10914 chr3R 15257057 15257111 + 14 NA intron (FBgn0051221, intron 2 of 4) protein_coding-intron (FBgn0051221, intron 2 of 4) -6163 FBgn0038706 FBgn0038706 FBtr0083770 CG3517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5981 chr2R 18453514 18453642 + 14 NA exon (FBgn0260866, exon 2 of 4) protein_coding-exon (FBgn0260866, exon 2 of 4) 3726 FBgn0034737 FBgn0034737 FBtr0071836 CG11362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12547 chr3R 26550434 26550844 + 14 NA Intergenic Intergenic -1170 FBgn0039797 FBgn0039797 FBtr0085699 CG1340 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5839 chr2R 17355662 17355914 + 14 NA intron (FBgn0010415, intron 2 of 6) protein_coding-intron (FBgn0010415, intron 2 of 5) -13646 FBgn0026369 FBgn0026369 FBtr0071642 Sara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5763 chr2R 16711617 16711742 + 14 NA exon (FBgn0011674, exon 3 of 4) protein_coding-exon (FBgn0011674, exon 3 of 4) 8240 FBgn0016984 FBgn0016984 FBtr0071563 sktl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4553 chr2R 6261361 6261448 + 14 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 6210 FBgn0033515 FBgn0033515 FBtr0088323 Ir47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4021 chr2R 1824999 1825088 + 14 NA Intergenic Intergenic -20317 FBgn0033047 FBgn0033047 FBtr0085966 CG7882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7902 chr3L 13368553 13368650 + 14 NA Intergenic Intergenic -2486 FBgn0036350 FBgn0036350 FBtr0331787 CG14111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10900 chr3R 15154829 15154883 + 14 NA promoter-TSS (FBgn0262903) ncRNA-promoter-TSS (FBgn0262903) -602 FBgn0262903 FBgn0262903 FBtr0306320 CR43258 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10199 chr3R 10323676 10323821 + 14 NA Intergenic Intergenic 13686 FBgn0038233 FBgn0038233 FBtr0082987 HtrA2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6473 chr2RHet 1450201 1450351 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4081 chr2R 2744488 2744556 + 14 NA Intergenic Intergenic 15752 FBgn0033109 FBgn0033109 FBtr0086208 coro protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6366 chr2RHet 545215 545375 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_279 chr2L 1482351 1482430 + 14 NA Intergenic Intergenic -9905 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9352 chr3R 3308419 3308538 + 14 NA Intergenic Intergenic 5995 FBgn0015569 FBgn0015569 FBtr0305911 alpha-Est10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12959 chr4 725164 725259 + 14 NA promoter-TSS (FBgn0005558) protein_coding-promoter-TSS (FBgn0005558) -492 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_509 chr2L 3489836 3489890 + 14 NA intron (FBgn0031542, intron 1 of 1) protein_coding-intron (FBgn0031542, intron 1 of 1) 1208 FBgn0031542 FBgn0031542 FBtr0077568 CG15414 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1491 chr2L 11087026 11087336 + 14 NA intron (FBgn0032338, intron 1 of 1) protein_coding-intron (FBgn0032338, intron 1 of 1) -1150 FBgn0032338 FBgn0032338 FBtr0307171 CG16854 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1826 chr2L 13674576 13674663 + 14 NA Intergenic Intergenic 9094 FBgn0028527 FBgn0028527 FBtr0080527 CG18507 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12452 chr3R 25647640 25647806 + 14 NA intron (FBgn0039704, intron 1 of 7) protein_coding-intron (FBgn0039704, intron 1 of 7) 2889 FBgn0039704 FBgn0039704 FBtr0085486 neo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2788 chr2L 17930549 17930692 + 14 NA Intergenic Intergenic -11489 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5381 chr2R 13273599 13273743 + 14 NA Intergenic Intergenic 5679 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4774 chr2R 7948928 7949100 + 14 NA exon (FBgn0028407, exon 3 of 4) protein_coding-exon (FBgn0028407, exon 3 of 4) 6421 FBgn0028407 FBgn0028407 FBtr0087980 Drep-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11025 chr3R 15902248 15902302 + 14 NA Intergenic Intergenic 5897 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3903 chr2R 182263 182453 + 14 NA Intergenic Intergenic -51914 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5768 chr2R 16741090 16741204 + 14 NA Intergenic Intergenic -1521 FBgn0034553 FBgn0034553 FBtr0071560 CG9993 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11739 chr3R 22732739 22732868 + 14 NA intron (FBgn0004359, intron 2 of 2) protein_coding-intron (FBgn0004359, intron 2 of 2) 5805 FBgn0004510 FBgn0004510 FBtr0330167 Ets97D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7114 chr3L 5837506 5837560 + 14 NA exon (FBgn0003984, exon 1 of 6) protein_coding-exon (FBgn0003984, exon 1 of 6) 1231 FBgn0003984 FBgn0003984 FBtr0077082 vn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10210 chr3R 10430500 10430853 + 14 NA exon (FBgn0020299, exon 5 of 5) protein_coding-exon (FBgn0020299, exon 5 of 5) -4688 FBgn0038246 FBgn0038246 FBtr0082961 CG14853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6416 chr2RHet 853376 853482 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3139 chr2L 20020178 20020627 + 14 NA Intergenic Intergenic -3120 FBgn0264443 FBgn0264443 FBtr0332566 CG43861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8911 chr3LHet 1692246 1692361 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5922 chr2R 17916247 17916365 + 14 NA intron (FBgn0085399, intron 2 of 8) protein_coding-intron (FBgn0085399, intron 2 of 8) -6043 FBgn0034681 FBgn0034681 FBtr0071749 CG9308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9158 chr3R 2128855 2128922 + 14 NA exon (FBgn0037424, exon 3 of 3) protein_coding-exon (FBgn0037424, exon 3 of 3) 1360 FBgn0037424 FBgn0037424 FBtr0078607 Osi15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9354 chr3R 3380784 3380838 + 14 NA Intergenic Intergenic -5967 FBgn0015568 FBgn0015568 FBtr0081544 alpha-Est1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7966 chr3L 13777110 13777342 + 14 NA intron (FBgn0264001, intron 2 of 13) protein_coding-intron (FBgn0264001, intron 2 of 13) 19274 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12928 chr4 538519 538648 + 14 NA intron (FBgn0004607, intron 3 of 12) protein_coding-intron (FBgn0004607, intron 3 of 13) 16147 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12723 chr3R 27327579 27327773 + 14 NA intron (FBgn0039851, intron 1 of 6) protein_coding-intron (FBgn0039851, intron 1 of 6) 2715 FBgn0039851 FBgn0039851 FBtr0085790 mey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9269 chr3R 2816860 2817010 + 14 NA intron (FBgn0260642, intron 1 of 6) protein_coding-intron (FBgn0260642, intron 1 of 6) -58373 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4677 chr2R 7409741 7409934 + 14 NA Intergenic Intergenic 5551 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11604 chr3R 22173559 22173723 + 14 NA intron (FBgn0053970, intron 2 of 8) protein_coding-intron (FBgn0053970, intron 2 of 8) -2446 FBgn0039421 FBgn0039421 FBtr0085027 CG6036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12771 chr3R 27591062 27591268 + 14 NA promoter-TSS (FBgn0003065) protein_coding-promoter-TSS (FBgn0003065) -677 FBgn0003065 FBgn0003065 FBtr0085859 CG2150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6564 chr2RHet 1943651 1943765 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8691 chr3L 22324786 22324932 + 14 NA intron (FBgn0004449, intron 2 of 11) protein_coding-intron (FBgn0004449, intron 2 of 8) 1981 FBgn0052450 FBgn0052450 FBtr0078501 CG32450 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3367 chr2L 21278394 21278626 + 14 NA intron (FBgn0032938, intron 8 of 9) protein_coding-intron (FBgn0032938, intron 8 of 9) 5763 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12589 chr3R 26754872 26755051 + 14 NA exon (FBgn0020912, exon 5 of 5) protein_coding-exon (FBgn0020912, exon 5 of 5) 7268 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_812 chr2L 5763947 5764041 + 14 NA exon (FBgn0031737, exon 2 of 2) protein_coding-exon (FBgn0031737, exon 2 of 2) 2148 FBgn0031737 FBgn0031737 FBtr0079163 obst-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10595 chr3R 13066684 13066825 + 14 NA intron (FBgn0038494, intron 1 of 4) protein_coding-intron (FBgn0038494, intron 1 of 5) 6844 FBgn0038494 FBgn0038494 FBtr0083411 beat-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9948 chr3R 8421129 8421282 + 14 NA exon (FBgn0038063, exon 1 of 7) protein_coding-exon (FBgn0038063, exon 1 of 7) 32231 FBgn0005671 FBgn0005671 FBtr0301661 Vha55 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10883 chr3R 15031478 15031666 + 14 NA Intergenic Intergenic -6343 FBgn0025680 FBgn0025680 FBtr0083736 cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2586 chr2L 17044649 17044874 + 14 NA Intergenic Intergenic -1596 FBgn0264346 FBgn0264346 FBtr0332013 CR43802 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11931 chr3R 23600806 23600863 + 14 NA intron (FBgn0085382, intron 11 of 11) protein_coding-intron (FBgn0085382, intron 11 of 11) 38572 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10902 chr3R 15186535 15186619 + 14 NA Intergenic Intergenic 6804 FBgn0262839 FBgn0262839 FBtr0306081 CG43203 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2259 chr2L 15468556 15468695 + 14 NA Intergenic Intergenic 9644 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2900 chr2L 18489976 18490128 + 14 NA exon (FBgn0032683, exon 11 of 12) protein_coding-exon (FBgn0032683, exon 11 of 12) 4635 FBgn0032682 FBgn0032682 FBtr0300674 CG10176 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13157 chrU 1255942 1256090 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4016 chr2R 1708980 1709152 + 14 NA intron (FBgn0085414, intron 1 of 9) protein_coding-intron (FBgn0085414, intron 1 of 9) 16847 FBgn0085414 FBgn0085414 FBtr0300553 dpr12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_662 chr2L 4524423 4524533 + 14 NA exon (FBgn0053196, exon 29 of 47) protein_coding-exon (FBgn0053196, exon 29 of 47) -47454 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1388 chr2L 9850354 9850490 + 14 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 2133 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2413 chr2L 16088690 16088744 + 14 NA Intergenic Intergenic -6292 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2202 chr2L 15231335 15231588 + 14 NA intron (FBgn0028516, intron 4 of 6) protein_coding-intron (FBgn0028516, intron 6 of 8) 14457 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3224 chr2L 20502944 20503140 + 14 NA Intergenic Intergenic 7936 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1966 chr2L 14408559 14408673 + 14 NA exon (FBgn0004858, exon 1 of 3) protein_coding-exon (FBgn0004858, exon 1 of 3) 931 FBgn0004858 FBgn0004858 FBtr0080637 elB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2841 chr2L 18091585 18091865 + 14 NA exon (FBgn0032663, exon 1 of 2) protein_coding-exon (FBgn0032663, exon 1 of 2) 513 FBgn0032663 FBgn0032663 FBtr0081045 CG15153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_774 chr2L 5512064 5512244 + 14 NA Intergenic Intergenic -5465 FBgn0031707 FBgn0031707 FBtr0329966 CG14020 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2766 chr2L 17826547 17826689 + 14 NA intron (FBgn0262018, intron 3 of 14) protein_coding-intron (FBgn0262018, intron 2 of 13) -13946 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11400 chr3R 19800453 19800542 + 14 NA TTS (FBgn0051140) protein_coding-TTS (FBgn0051140) -8728 FBgn0051451 FBgn0051451 FBtr0308922 CR31451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2301 chr2L 15584280 15584383 + 14 NA TTS (FBgn0028370) protein_coding-TTS (FBgn0028370) 27638 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2797 chr2L 17949551 17949657 + 14 NA Intergenic Intergenic -13810 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5757 chr2R 16633608 16633719 + 14 NA intron (FBgn0040726, intron 6 of 7) protein_coding-intron (FBgn0040726, intron 6 of 7) -4789 FBgn0085230 FBgn0085230 FBtr0112394 CG34201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9413 chr3R 3884848 3884980 + 14 NA promoter-TSS (FBgn0037546) protein_coding-promoter-TSS (FBgn0037546) -92 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8680 chr3L 22213053 22213247 + 14 NA intron (FBgn0037153, intron 3 of 10) protein_coding-intron (FBgn0037153, intron 3 of 10) 42845 FBgn0028500 FBgn0028500 FBtr0078512 Rich protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12461 chr3R 25669637 25669847 + 14 NA intron (FBgn0039709, intron 2 of 11) protein_coding-intron (FBgn0039709, intron 2 of 11) 2363 FBgn0039709 FBgn0039709 FBtr0085488 Cad99C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10459 chr3R 12227815 12227894 + 14 NA exon (FBgn0003513, exon 2 of 8) protein_coding-exon (FBgn0003513, exon 2 of 8) 1558 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6579 chr2RHet 1968302 1968672 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3569 chr2L 22015429 22016143 + 14 NA exon (FBgn0051693, exon 1 of 1) protein_coding-exon (FBgn0051693, exon 1 of 1) 555 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10389 chr3R 11780584 11780652 + 14 NA exon (FBgn0013334, exon 6 of 9) protein_coding-exon (FBgn0013334, exon 6 of 9) -3953 FBgn0051088 FBgn0051088 FBtr0083241 CG31088 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10332 chr3R 11424602 11424656 + 14 NA Intergenic Intergenic -36561 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11623 chr3R 22220642 22220950 + 14 NA Intergenic Intergenic 8582 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12596 chr3R 26781822 26781962 + 14 NA Intergenic Intergenic -3637 FBgn0039812 FBgn0039812 FBtr0085731 CG15548 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2744 chr2L 17782502 17782643 + 14 NA Intergenic Intergenic -9840 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12949 chr4 624458 624724 + 14 NA exon (FBgn0028996, exon 2 of 4) protein_coding-exon (FBgn0028996, exon 2 of 4) 3760 FBgn0028996 FBgn0028996 FBtr0089104 onecut protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8044 chr3L 14392523 14392611 + 14 NA Intergenic Intergenic 3258 FBgn0036422 FBgn0036422 FBtr0075729 CG3868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10458 chr3R 12227047 12227203 + 14 NA intron (FBgn0003513, intron 2 of 8) protein_coding-intron (FBgn0003513, intron 2 of 7) 2287 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7151 chr3L 6104858 6104912 + 14 NA exon (FBgn0005658, exon 1 of 7) protein_coding-exon (FBgn0005658, exon 1 of 7) 318 FBgn0005658 FBgn0005658 FBtr0077055 Ets65A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2201 chr2L 15227615 15227699 + 14 NA Intergenic Intergenic 12435 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3092 chr2L 19761778 19761871 + 14 NA TTS (FBgn0032819) protein_coding-TTS (FBgn0032819) 2310 FBgn0032820 FBgn0032820 FBtr0081322 fbp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_204 chr2L 1309677 1309797 + 14 NA Intergenic Intergenic -19424 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8781 chr3L 23782495 23782549 + 14 NA Intergenic Intergenic 5191 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_414 chr2L 2616436 2616553 + 14 NA Intergenic Intergenic -3693 FBgn0263322 FBgn0263322 FBtr0308746 CG43403 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12703 chr3R 27196688 27196776 + 14 NA TTS (FBgn0085376) protein_coding-TTS (FBgn0085376) -1417 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6510 chr2RHet 1855000 1855185 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13005 chr4 1014093 1014240 + 14 NA intron (FBgn0019650, intron 2 of 8) protein_coding-intron (FBgn0019650, intron 2 of 8) 3815 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10771 chr3R 14206919 14207089 + 14 NA promoter-TSS (FBgn0038610) protein_coding-promoter-TSS (FBgn0038610) -107 FBgn0038610 FBgn0038610 FBtr0083583 CG7675 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4689 chr2R 7440222 7440394 + 14 NA Intergenic Intergenic -24920 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6292 chr2RHet 8219 8379 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2178 chr2L 15156718 15156905 + 14 NA Intergenic Intergenic -24422 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_1283 chr2L 8930059 8930121 + 14 NA exon (FBgn0085427, exon 10 of 11) protein_coding-exon (FBgn0085427, exon 10 of 11) -3973 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5700 chr2R 16068481 16068631 + 14 NA Intergenic Intergenic 31568 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6907 chr3L 2229516 2229570 + 14 NA promoter-TSS (FBgn0035317) protein_coding-promoter-TSS (FBgn0035317) -103 FBgn0035317 FBgn0035317 FBtr0332661 osm-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7311 chr3L 7438605 7438876 + 14 NA intron (FBgn0259935, intron 2 of 7) protein_coding-intron (FBgn0259935, intron 2 of 7) -4907 FBgn0052382 FBgn0052382 FBtr0300362 sphinx2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12492 chr3R 25901800 25901883 + 14 NA intron (FBgn0015542, intron 6 of 7) protein_coding-intron (FBgn0015542, intron 6 of 11) 13433 FBgn0051031 FBgn0051031 FBtr0085566 CG31031 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5605 chr2R 15451069 15451123 + 14 NA intron (FBgn0003435, intron 5 of 10) protein_coding-intron (FBgn0003435, intron 5 of 9) 1353 FBgn0053535 FBgn0053535 FBtr0100843 tRNA:CR33535 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1415 chr2L 10074218 10074272 + 14 NA exon (FBgn0032180, exon 8 of 14) protein_coding-exon (FBgn0032180, exon 8 of 14) 13374 FBgn0032178 FBgn0032178 FBtr0079938 Spn31A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11544 chr3R 21905555 21905923 + 14 NA intron (FBgn0039411, intron 6 of 10) protein_coding-intron (FBgn0039411, intron 6 of 10) -17006 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5973 chr2R 18330698 18330840 + 14 NA Intergenic Intergenic 15785 FBgn0034730 FBgn0034730 FBtr0071830 ppk12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4651 chr2R 7224737 7224791 + 14 NA TTS (FBgn0003382) protein_coding-TTS (FBgn0003382) 419 FBgn0043470 FBgn0043470 FBtr0088121 lambdaTry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2234 chr2L 15391307 15391392 + 14 NA Intergenic Intergenic -29722 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1970 chr2L 14418742 14418796 + 14 NA Intergenic Intergenic -1451 FBgn0032546 FBgn0032546 FBtr0080634 pburs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11626 chr3R 22235433 22235593 + 14 NA Intergenic Intergenic -4297 FBgn0039425 FBgn0039425 FBtr0306708 CG5432 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8597 chr3L 20276062 20276274 + 14 NA intron (FBgn0052227, intron 1 of 9) protein_coding-intron (FBgn0052227, intron 1 of 9) -7733 FBgn0036962 FBgn0036962 FBtr0074849 CG17122 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11333 chr3R 18766221 18766391 + 14 NA intron (FBgn0017590, intron 2 of 10) protein_coding-intron (FBgn0017590, intron 2 of 10) 17232 FBgn0039030 FBgn0039030 FBtr0084338 CG6660 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6887 chr3L 2024011 2024291 + 14 NA promoter-TSS (FBgn0259702) protein_coding-promoter-TSS (FBgn0259702) -760 FBgn0259702 FBgn0259702 FBtr0299955 CG42356 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9214 chr3R 2549909 2550052 + 14 NA intron (FBgn0051481, intron 2 of 7) protein_coding-intron (FBgn0051481, intron 3 of 8) 17805 FBgn0051481 FBgn0051481 FBtr0089279 pb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1203 chr2L 8800182 8800361 + 14 NA Intergenic Intergenic -9129 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2545 chr2L 16928357 16928431 + 14 NA Intergenic Intergenic 16980 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1427 chr2L 10190443 10190624 + 14 NA exon (FBgn0051874, exon 2 of 2) protein_coding-exon (FBgn0051874, exon 2 of 2) 963 FBgn0051874 FBgn0051874 FBtr0079964 CG31874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3479 chr2L 21821970 21822077 + 14 NA Intergenic Intergenic -6570 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13746 chrX 14806132 14806222 + 14 NA exon (FBgn0030596, exon 2 of 2) protein_coding-exon (FBgn0030596, exon 2 of 2) -1299 FBgn0030595 FBgn0030595 FBtr0073977 CG14406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4298 chr2R 4595298 4595396 + 14 NA exon (FBgn0033324, exon 6 of 8) protein_coding-exon (FBgn0033324, exon 6 of 8) 1526 FBgn0033324 FBgn0033324 FBtr0307024 CG14744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4056 chr2R 2453914 2453968 + 14 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) -32841 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7238 chr3L 6880200 6880254 + 14 NA Intergenic Intergenic 26837 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_391 chr2L 2439115 2439269 + 14 NA intron (FBgn0000490, intron 1 of 2) protein_coding-intron (FBgn0000490, intron 1 of 2) -15847 FBgn0000490 FBgn0000490 FBtr0310007 dpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12292 chr3R 25134428 25134571 + 14 NA Intergenic Intergenic 10837 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6159 chr2R 20092315 20092408 + 14 NA exon (FBgn0034990, exon 2 of 3) protein_coding-exon (FBgn0034990, exon 2 of 3) 2085 FBgn0034990 FBgn0034990 FBtr0072276 CG11406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_951 chr2L 6986705 6986759 + 14 NA intron (FBgn0031879, intron 4 of 13) protein_coding-intron (FBgn0031879, intron 4 of 11) 14489 FBgn0262616 FBgn0262616 FBtr0305347 CR43142 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_9772 chr3R 6877227 6877507 + 14 NA Intergenic Intergenic -36775 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1297 chr2L 9021027 9021303 + 14 NA Intergenic Intergenic 4239 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_149 chr2L 1020743 1020891 + 14 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) 6073 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6766 chr3L 854912 855034 + 14 NA exon (FBgn0035170, exon 2 of 7) protein_coding-exon (FBgn0035170, exon 2 of 7) 2275 FBgn0035170 FBgn0035170 FBtr0072594 dpr20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11465 chr3R 21420835 21421046 + 14 NA exon (FBgn0011666, exon 5 of 7) protein_coding-exon (FBgn0011666, exon 5 of 7) -6274 FBgn0262319 FBgn0262319 FBtr0304486 mir-1000 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_497 chr2L 3373410 3373476 + 14 NA promoter-TSS (FBgn0085423) protein_coding-promoter-TSS (FBgn0085423) -71 FBgn0085423 FBgn0085423 FBtr0306335 CG34394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9482 chr3R 4379085 4379507 + 14 NA exon (FBgn0037594, exon 1 of 3) protein_coding-exon (FBgn0037594, exon 1 of 3) 966 FBgn0037594 FBgn0037594 FBtr0081872 Or85d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6688 chr2RHet 3151460 3151620 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_420 chr2L 2666577 2666792 + 14 NA TTS (FBgn0031444) protein_coding-TTS (FBgn0031444) 1622 FBgn0031444 FBgn0031444 FBtr0077700 CG9879 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7425 chr3L 8637489 8637581 + 14 NA TTS (FBgn0052029) protein_coding-TTS (FBgn0052029) 2387 FBgn0035921 FBgn0035921 FBtr0273349 CG13305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6198 chr2R 20296895 20297139 + 14 NA exon (FBgn0010414, exon 2 of 8) protein_coding-exon (FBgn0010414, exon 2 of 8) 1053 FBgn0010414 FBgn0010414 FBtr0072362 SerT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1259 chr2L 8882825 8883184 + 14 NA Intergenic Intergenic -8485 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11344 chr3R 18901009 18901078 + 14 NA exon (FBgn0039054, exon 9 of 11) protein_coding-exon (FBgn0039054, exon 9 of 11) -8062 FBgn0039048 FBgn0039048 FBtr0303508 CG17111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7931 chr3L 13588716 13589044 + 14 NA intron (FBgn0264001, intron 3 of 10) protein_coding-intron (FBgn0264001, intron 5 of 12) -25057 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4279 chr2R 4376379 4376492 + 14 NA intron (FBgn0050361, intron 4 of 18) protein_coding-intron (FBgn0050361, intron 4 of 18) 16947 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12308 chr3R 25180208 25180393 + 14 NA Intergenic Intergenic -34964 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4973 chr2R 9599039 9599337 + 14 NA intron (FBgn0000633, intron 4 of 12) protein_coding-intron (FBgn0000633, intron 4 of 12) -18314 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4798 chr2R 8125866 8126016 + 14 NA Intergenic Intergenic -1973 FBgn0033703 FBgn0033703 FBtr0087996 CG13170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11182 chr3R 17060764 17060886 + 14 NA intron (FBgn0000527, intron 1 of 6) protein_coding-intron (FBgn0000527, intron 1 of 6) 2075 FBgn0000527 FBgn0000527 FBtr0084106 e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5665 chr2R 15860226 15860377 + 14 NA Intergenic Intergenic -6448 FBgn0034479 FBgn0034479 FBtr0305676 CG8654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5343 chr2R 12877990 12878078 + 14 NA intron (FBgn0004580, intron 8 of 10) protein_coding-intron (FBgn0004580, intron 8 of 10) 8065 FBgn0050461 FBgn0050461 FBtr0100252 CG30461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_179 chr2L 1214422 1214517 + 14 NA Intergenic Intergenic 3316 FBgn0262944 FBgn0262944 FBtr0306546 CR43263 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13843 chrX 21205905 21206037 + 14 NA exon (FBgn0015558, exon 5 of 8) protein_coding-exon (FBgn0015558, exon 5 of 8) 4076 FBgn0015558 FBgn0015558 FBtr0329900 tty protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12058 chr3R 24082410 24082633 + 14 NA Intergenic Intergenic 6823 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10763 chr3R 14167778 14167926 + 14 NA intron (FBgn0038606, intron 3 of 3) protein_coding-intron (FBgn0038606, intron 3 of 3) -13191 FBgn0051235 FBgn0051235 FBtr0083588 CG31235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10964 chr3R 15555569 15555939 + 14 NA promoter-TSS (FBgn0024963) protein_coding-promoter-TSS (FBgn0024963) -927 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2242 chr2L 15410766 15410955 + 14 NA Intergenic Intergenic 14725 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_151 chr2L 1025009 1025194 + 14 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) 1789 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9196 chr3R 2463952 2464087 + 14 NA Intergenic Intergenic -2935 FBgn0051286 FBgn0051286 FBtr0081682 CG31286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7174 chr3L 6283846 6283929 + 14 NA Intergenic Intergenic 15087 FBgn0262787 FBgn0262787 FBtr0305900 CG43168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11011 chr3R 15796307 15796496 + 14 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) -2834 FBgn0051213 FBgn0051213 FBtr0083824 CG31213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11912 chr3R 23497331 23497782 + 14 NA intron (FBgn0039536, intron 22 of 28) protein_coding-intron (FBgn0039536, intron 22 of 28) -5741 FBgn0039537 FBgn0039537 FBtr0085215 CG5590 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9228 chr3R 2597375 2597508 + 14 NA intron (FBgn0261638, intron 1 of 2) ncRNA-intron (FBgn0261638, intron 1 of 2) 4669 FBgn0261638 FBgn0261638 FBtr0309069 CR42721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7745 chr3L 12215438 12215682 + 14 NA intron (FBgn0260941, intron 2 of 9) protein_coding-intron (FBgn0260941, intron 3 of 9) -8010 FBgn0260941 FBgn0260941 FBtr0301053 app protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5428 chr2R 13756889 13756952 + 14 NA intron (FBgn0034282, intron 2 of 6) protein_coding-intron (FBgn0034282, intron 3 of 6) 2595 FBgn0034282 FBgn0034282 FBtr0113091 Mapmodulin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1670 chr2L 12624410 12624638 + 14 NA intron (FBgn0085424, intron 2 of 3) protein_coding-intron (FBgn0085424, intron 4 of 5) 6176 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7281 chr3L 7082425 7082599 + 14 NA promoter-TSS (FBgn0035736) protein_coding-promoter-TSS (FBgn0035736) -625 FBgn0035736 FBgn0035736 FBtr0076928 Cpr65Eb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4581 chr2R 6569218 6569453 + 14 NA intron (FBgn0024836, intron 1 of 5) protein_coding-intron (FBgn0024836, intron 1 of 5) 8485 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4716 chr2R 7651090 7651236 + 14 NA Intergenic Intergenic -4795 FBgn0033650 FBgn0033650 FBtr0088029 CG13193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8661 chr3L 21769454 21769608 + 14 NA intron (FBgn0260754, intron 1 of 2) protein_coding-intron (FBgn0260754, intron 1 of 2) 1400 FBgn0260754 FBgn0260754 FBtr0301251 CG42552 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1094 chr2L 8561584 8561725 + 14 NA intron (FBgn0011259, intron 2 of 20) protein_coding-intron (FBgn0011259, intron 2 of 21) -9234 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8523 chr3L 18699601 18699738 + 14 NA Intergenic Intergenic -8157 FBgn0036808 FBgn0036808 FBtr0334056 Dic4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5707 chr2R 16110812 16110945 + 14 NA Intergenic Intergenic -6108 FBgn0011869 FBgn0011869 FBtr0086312 tRNA:G3:56EFa tRNA Nup98-S2-pascual-garcia2017_R1_peak_12368 chr3R 25407770 25407970 + 14 NA Intergenic Intergenic 5952 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11185 chr3R 17110903 17111091 + 14 NA intron (FBgn0038880, intron 3 of 5) protein_coding-intron (FBgn0038880, intron 3 of 5) 2078 FBgn0038879 FBgn0038879 FBtr0084056 CG17298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7555 chr3L 10440493 10440711 + 14 NA Intergenic Intergenic -13397 FBgn0052058 FBgn0052058 FBtr0076293 Ir67c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6606 chr2RHet 2142829 2143070 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10167 chr3R 9976324 9976426 + 14 NA exon (FBgn0038208, exon 3 of 3) protein_coding-exon (FBgn0038208, exon 3 of 3) 1346 FBgn0038208 FBgn0038208 FBtr0082907 CG14355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2902 chr2L 18495972 18496026 + 14 NA exon (FBgn0032683, exon 3 of 12) protein_coding-exon (FBgn0032683, exon 3 of 12) 4858 FBgn0032683 FBgn0032683 FBtr0332323 kon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4920 chr2R 9205813 9205933 + 14 NA Intergenic Intergenic 11073 FBgn0262391 FBgn0262391 FBtr0304273 mir-184 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7166 chr3L 6233080 6233134 + 14 NA promoter-TSS (FBgn0035695) protein_coding-promoter-TSS (FBgn0035695) -1016 FBgn0035695 FBgn0035695 FBtr0332068 CG10226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10349 chr3R 11560304 11560358 + 14 NA Intergenic Intergenic 2863 FBgn0085303 FBgn0085303 FBtr0112469 CG34274 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4662 chr2R 7299954 7300074 + 14 NA exon (FBgn0015872, exon 4 of 4) protein_coding-exon (FBgn0015872, exon 4 of 4) -2001 FBgn0040503 FBgn0040503 FBtr0088135 CG7763 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5210 chr2R 11664462 11664656 + 14 NA promoter-TSS (FBgn0083919) protein_coding-promoter-TSS (FBgn0083919) 37891 FBgn0083919 FBgn0083919 FBtr0329910 Zasp52 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7301 chr3L 7309563 7309662 + 14 NA Intergenic Intergenic -3556 FBgn0035760 FBgn0035760 FBtr0076837 CG8607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3197 chr2L 20384048 20384185 + 14 NA Intergenic Intergenic -1761 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7077 chr3L 5216527 5216650 + 14 NA intron (FBgn0052423, intron 2 of 11) protein_coding-intron (FBgn0052423, intron 2 of 10) -10995 FBgn0035598 FBgn0035598 FBtr0077171 CG4669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6755 chr3L 669903 670056 + 14 NA Intergenic Intergenic 10347 FBgn0035151 FBgn0035151 FBtr0072614 CG17129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8858 chr3LHet 718055 718388 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2123 chr2L 14924975 14925138 + 14 NA exon (FBgn0028887, exon 1 of 3) protein_coding-exon (FBgn0028887, exon 1 of 3) 321 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7825 chr3L 12689697 12690101 + 14 NA exon (FBgn0014343, exon 2 of 5) protein_coding-exon (FBgn0014343, exon 2 of 5) 3160 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4995 chr2R 9718150 9718473 + 14 NA exon (FBgn0033872, exon 4 of 4) protein_coding-exon (FBgn0033872, exon 4 of 4) 3845 FBgn0033872 FBgn0033872 FBtr0087635 CG6329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12647 chr3R 26987009 26987165 + 14 NA intron (FBgn0086704, intron 6 of 8) protein_coding-intron (FBgn0013973, intron 16 of 16) 7738 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3949 chr2R 832567 832749 + 14 NA Intergenic Intergenic -4514 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10988 chr3R 15675550 15675773 + 14 NA intron (FBgn0038735, intron 1 of 9) protein_coding-intron (FBgn0038735, intron 1 of 8) 2616 FBgn0038735 FBgn0038735 FBtr0083813 CG4662 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_741 chr2L 5359962 5360148 + 14 NA exon (FBgn0016920, exon 12 of 13) protein_coding-exon (FBgn0016920, exon 12 of 13) -17706 FBgn0031703 FBgn0031703 FBtr0079077 CG12512 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4752 chr2R 7812480 7812606 + 14 NA Intergenic Intergenic -12263 FBgn0033667 FBgn0033667 FBtr0088054 CG13183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12070 chr3R 24130984 24131078 + 14 NA promoter-TSS (FBgn0039577) protein_coding-promoter-TSS (FBgn0039577) -704 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1527 chr2L 11338622 11338748 + 14 NA Intergenic Intergenic 4578 FBgn0032360 FBgn0032360 FBtr0080251 CG14926 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8448 chr3L 17886967 17887085 + 14 NA intron (FBgn0036769, intron 2 of 7) protein_coding-intron (FBgn0036769, intron 2 of 6) 1936 FBgn0036769 FBgn0036769 FBtr0075155 Tsp74F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5829 chr2R 17249897 17249985 + 14 NA intron (FBgn0000395, intron 3 of 6) protein_coding-intron (FBgn0000395, intron 3 of 6) -11592 FBgn0034624 FBgn0034624 FBtr0071611 CG17974 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1292 chr2L 8980857 8981020 + 14 NA exon (FBgn0040963, exon 2 of 3) protein_coding-exon (FBgn0040963, exon 2 of 3) 279 FBgn0040963 FBgn0040963 FBtr0079760 CG18662 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3436 chr2L 21719515 21719605 + 14 NA exon (FBgn0051619, exon 15 of 19) protein_coding-exon (FBgn0051619, exon 15 of 19) 35378 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5930 chr2R 17981977 17982169 + 14 NA exon (FBgn0034693, exon 2 of 3) protein_coding-exon (FBgn0034693, exon 2 of 3) -3313 FBgn0263250 FBgn0263250 FBtr0308240 CG43393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8938 chr3R 6516 6604 + 14 NA intron (FBgn0037213, intron 1 of 2) protein_coding-intron (FBgn0037213, intron 2 of 3) -6125 FBgn0053294 FBgn0053294 FBtr0308945 CR33294 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_206 chr2L 1318375 1318543 + 14 NA Intergenic Intergenic -10702 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6297 chr2RHet 38810 38864 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8106 chr3L 15027155 15027323 + 14 NA promoter-TSS (FBgn0261090) protein_coding-promoter-TSS (FBgn0261090) 57 FBgn0261090 FBgn0261090 FBtr0299849 Sytbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6848 chr3L 1594452 1594598 + 14 NA exon (FBgn0035237, exon 2 of 5) protein_coding-exon (FBgn0035237, exon 2 of 5) 8149 FBgn0035238 FBgn0035238 FBtr0072825 CG12104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3492 chr2L 21858894 21859003 + 14 NA Intergenic Intergenic 30355 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7947 chr3L 13703236 13703465 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 89413 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13130 chrU 490816 490870 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4648 chr2R 7213856 7214130 + 14 NA intron (FBgn0003382, intron 1 of 8) protein_coding-intron (FBgn0003382, intron 1 of 8) 700 FBgn0003382 FBgn0003382 FBtr0332463 sha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9195 chr3R 2451440 2451686 + 14 NA Intergenic Intergenic 2059 FBgn0037460 FBgn0037460 FBtr0081701 sowi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_800 chr2L 5678845 5679066 + 14 NA exon (FBgn0031729, exon 2 of 2) protein_coding-exon (FBgn0031729, exon 2 of 2) 317 FBgn0031729 FBgn0031729 FBtr0305128 CG12511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7846 chr3L 12946553 12946637 + 14 NA exon (FBgn0036325, exon 2 of 2) protein_coding-exon (FBgn0036325, exon 2 of 2) 1152 FBgn0036325 FBgn0036325 FBtr0075903 CG10752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2691 chr2L 17547615 17547803 + 14 NA Intergenic Intergenic 5855 FBgn0262996 FBgn0262996 FBtr0306838 CR43304 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7967 chr3L 13780381 13780626 + 14 NA intron (FBgn0264001, intron 1 of 13) protein_coding-intron (FBgn0264001, intron 1 of 13) 15997 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_968 chr2L 7147764 7147922 + 14 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -14316 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5680 chr2R 15931840 15932042 + 14 NA Intergenic Intergenic -39449 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8694 chr3L 22346429 22346573 + 14 NA intron (FBgn0004449, intron 1 of 11) protein_coding-intron (FBgn0004449, intron 1 of 8) 23623 FBgn0052450 FBgn0052450 FBtr0078501 CG32450 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8857 chr3LHet 635008 635094 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12772 chr3R 27592542 27592613 + 14 NA TTS (FBgn0263384) ncRNA-TTS (FBgn0263384) 935 FBgn0263384 FBgn0263384 FBtr0309071 CR43436 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8955 chr3R 363879 363933 + 14 NA exon (FBgn0085386, exon 3 of 14) protein_coding-exon (FBgn0085386, exon 3 of 14) -3172 FBgn0037260 FBgn0037260 FBtr0303866 Mur82C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8239 chr3L 16271835 16272132 + 14 NA TTS (FBgn0036590) protein_coding-TTS (FBgn0036590) 388 FBgn0036591 FBgn0036591 FBtr0075478 CG13050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5030 chr2R 10137341 10137424 + 14 NA exon (FBgn0010241, exon 4 of 9) protein_coding-exon (FBgn0010241, exon 4 of 9) 2911 FBgn0010241 FBgn0010241 FBtr0087537 Mdr50 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9106 chr3R 1734825 1734879 + 14 NA intron (FBgn0083949, intron 1 of 16) protein_coding-intron (FBgn0083949, intron 1 of 16) 30393 FBgn0083949 FBgn0083949 FBtr0110807 CG34113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2798 chr2L 17950533 17950621 + 14 NA Intergenic Intergenic -12837 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9700 chr3R 6376881 6376935 + 14 NA intron (FBgn0001235, intron 6 of 12) protein_coding-intron (FBgn0001235, intron 6 of 11) -38130 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2631 chr2L 17205915 17205998 + 14 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 24018 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12992 chr4 964217 964294 + 14 NA exon (FBgn0019985, exon 6 of 9) protein_coding-exon (FBgn0019985, exon 6 of 9) 6810 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8278 chr3L 16554231 16554285 + 14 NA Intergenic Intergenic 4335 FBgn0036639 FBgn0036639 FBtr0075392 CG4229 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4206 chr2R 3886151 3886260 + 14 NA promoter-TSS (FBgn0027788) protein_coding-promoter-TSS (FBgn0027788) -127 FBgn0027788 FBgn0027788 FBtr0088869 Hey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3631 chr2L 22157234 22157388 + 14 NA intron (FBgn0261802, intron 8 of 8) protein_coding-intron (FBgn0261802, intron 7 of 7) 5557 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9093 chr3R 1656019 1656168 + 14 NA intron (FBgn0037385, intron 1 of 2) protein_coding-intron (FBgn0037385, intron 1 of 2) 309 FBgn0037385 FBgn0037385 FBtr0078640 glob3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3829 chr2L 22858057 22858283 + 14 NA Intergenic Intergenic -14962 FBgn0058005 FBgn0058005 FBtr0308291 CG40005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5968 chr2R 18266993 18267177 + 14 NA promoter-TSS (FBgn0025878) protein_coding-promoter-TSS (FBgn0025878) 68 FBgn0025878 FBgn0025878 FBtr0071821 wrapper protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11101 chr3R 16302422 16302611 + 14 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 2 of 17) 7757 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8634 chr3L 21230153 21230340 + 14 NA intron (FBgn0004865, intron 4 of 6) protein_coding-intron (FBgn0004865, intron 3 of 5) 10537 FBgn0004865 FBgn0004865 FBtr0078307 Eip78C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2703 chr2L 17601475 17601756 + 14 NA exon (FBgn0261089, exon 3 of 6) protein_coding-exon (FBgn0261089, exon 3 of 6) 6950 FBgn0261089 FBgn0261089 FBtr0303255 Sytalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5289 chr2R 12364142 12364196 + 14 NA Intergenic Intergenic 8455 FBgn0261293 FBgn0261293 FBtr0091479 CheB53b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8129 chr3L 15323164 15323282 + 14 NA Intergenic Intergenic -2123 FBgn0262892 FBgn0262892 FBtr0306306 CG43247 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_239 chr2L 1396731 1397046 + 14 NA intron (FBgn0002543, intron 2 of 13) protein_coding-intron (FBgn0002543, intron 2 of 13) 23561 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12370 chr3R 25425435 25425498 + 14 NA TTS (FBgn0086361) protein_coding-TTS (FBgn0086361) 1118 FBgn0039673 FBgn0039673 FBtr0330294 CG7568 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12597 chr3R 26786222 26786337 + 14 NA exon (FBgn0039812, exon 1 of 1) protein_coding-exon (FBgn0039812, exon 1 of 1) 750 FBgn0039812 FBgn0039812 FBtr0085731 CG15548 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1747 chr2L 12946031 12946396 + 14 NA Intergenic Intergenic -20536 FBgn0032462 FBgn0032462 FBtr0273445 CG16800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8022 chr3L 14170201 14170441 + 14 NA exon (FBgn0000411, exon 2 of 2) protein_coding-exon (FBgn0000411, exon 2 of 2) 1399 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1538 chr2L 11436514 11436568 + 14 NA exon (FBgn0261648, exon 2 of 4) protein_coding-exon (FBgn0261648, exon 2 of 4) 9062 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6290 chr2R 21140488 21140602 + 14 NA promoter-TSS (FBgn0050428) protein_coding-promoter-TSS (FBgn0050428) -292 FBgn0050428 FBgn0050428 FBtr0072451 CG30428 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7198 chr3L 6462271 6462375 + 14 NA intron (FBgn0261801, intron 3 of 6) protein_coding-intron (FBgn0261801, intron 3 of 6) 19201 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11954 chr3R 23676919 23677272 + 14 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) 5423 FBgn0039551 FBgn0039551 FBtr0085226 Or98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3205 chr2L 20397631 20397719 + 14 NA intron (FBgn0032857, intron 1 of 1) protein_coding-intron (FBgn0032857, intron 1 of 1) 1719 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11103 chr3R 16306478 16306662 + 14 NA exon (FBgn0262869, exon 2 of 18) protein_coding-exon (FBgn0262869, exon 2 of 18) 3703 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9153 chr3R 2117013 2117086 + 14 NA promoter-TSS (FBgn0037422) protein_coding-promoter-TSS (FBgn0037422) -575 FBgn0037422 FBgn0037422 FBtr0078605 Osi13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7571 chr3L 10596479 10596533 + 14 NA Intergenic Intergenic 20170 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5011 chr2R 9888206 9888469 + 14 NA intron (FBgn0002643, intron 2 of 6) protein_coding-intron (FBgn0002643, intron 2 of 6) 5149 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8372 chr3L 17309441 17309511 + 14 NA Intergenic Intergenic 1352 FBgn0262376 FBgn0262376 FBtr0304211 mir-219 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3923 chr2R 470468 470602 + 14 NA Intergenic Intergenic -12263 FBgn0260799 FBgn0260799 FBtr0111114 p120ctn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12202 chr3R 24605070 24605206 + 14 NA Intergenic Intergenic -10201 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7935 chr3L 13604251 13604367 + 14 NA intron (FBgn0264001, intron 3 of 10) protein_coding-intron (FBgn0264001, intron 4 of 12) -9628 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6668 chr2RHet 2574767 2575014 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7626 chr3L 10954996 10955148 + 14 NA Intergenic Intergenic -10676 FBgn0036112 FBgn0036112 FBtr0076194 CG14147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9504 chr3R 4518254 4518406 + 14 NA exon (FBgn0001180, exon 2 of 2) protein_coding-exon (FBgn0001180, exon 2 of 2) 1992 FBgn0001180 FBgn0001180 FBtr0081951 hb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2936 chr2L 18802523 18802611 + 14 NA Intergenic Intergenic 2780 FBgn0264362 FBgn0264362 FBtr0332209 CG43814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12382 chr3R 25467807 25467949 + 14 NA exon (FBgn0015129, exon 3 of 5) protein_coding-exon (FBgn0015129, exon 3 of 5) 17828 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5226 chr2R 11793777 11793831 + 14 NA intron (FBgn0264089, intron 1 of 20) protein_coding-intron (FBgn0264089, intron 1 of 19) -9872 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11315 chr3R 18298623 18299027 + 14 NA exon (FBgn0038975, exon 7 of 14) protein_coding-exon (FBgn0038975, exon 7 of 14) 4567 FBgn0038975 FBgn0038975 FBtr0301485 Nrx-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1214 chr2L 8818116 8818217 + 14 NA Intergenic Intergenic -7459 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3226 chr2L 20509259 20509354 + 14 NA Intergenic Intergenic 14200 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5099 chr2R 10686291 10686421 + 14 NA exon (FBgn0001319, exon 1 of 11) protein_coding-exon (FBgn0001319, exon 1 of 11) -1824 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11340 chr3R 18854197 18854286 + 14 NA Intergenic Intergenic -1806 FBgn0039039 FBgn0039039 FBtr0084364 lmd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4459 chr2R 5638928 5639082 + 14 NA Intergenic Intergenic -2197 FBgn0005614 FBgn0005614 FBtr0088473 trpl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3521 chr2L 21921854 21922016 + 14 NA Intergenic Intergenic 5574 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10596 chr3R 13070432 13070598 + 14 NA intron (FBgn0038494, intron 1 of 4) protein_coding-intron (FBgn0038494, intron 1 of 5) 3083 FBgn0038494 FBgn0038494 FBtr0083411 beat-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10680 chr3R 13606808 13606978 + 14 NA promoter-TSS (FBgn0262562) protein_coding-promoter-TSS (FBgn0262562) 13403 FBgn0262562 FBgn0262562 FBtr0305013 CG43102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2290 chr2L 15552436 15552839 + 14 NA promoter-TSS (FBgn0028370) protein_coding-promoter-TSS (FBgn0028370) -86 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1741 chr2L 12922448 12922502 + 14 NA exon (FBgn0040510, exon 4 of 12) protein_coding-exon (FBgn0040510, exon 4 of 12) 1384 FBgn0040510 FBgn0040510 FBtr0333225 ACXA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_978 chr2L 7263701 7263912 + 14 NA intron (FBgn0010453, intron 1 of 3) protein_coding-intron (FBgn0010453, intron 1 of 3) 6294 FBgn0051909 FBgn0051909 FBtr0300459 CG31909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8218 chr3L 16167697 16167813 + 14 NA Intergenic Intergenic -3275 FBgn0053795 FBgn0053795 FBtr0091799 CG33795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_589 chr2L 4138847 4139120 + 14 NA Intergenic Intergenic -10296 FBgn0031585 FBgn0031585 FBtr0077468 CG2955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12486 chr3R 25809064 25809177 + 14 NA promoter-TSS (FBgn0039728) protein_coding-promoter-TSS (FBgn0039728) -54 FBgn0039728 FBgn0039728 FBtr0085545 CG7896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6347 chr2RHet 456203 456356 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1448 chr2L 10623202 10623285 + 14 NA exon (FBgn0051721, exon 7 of 9) protein_coding-exon (FBgn0051721, exon 7 of 9) 16265 FBgn0032271 FBgn0032271 FBtr0080131 CG7329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2808 chr2L 17980568 17980806 + 14 NA exon (FBgn0023096, exon 6 of 25) protein_coding-exon (FBgn0023096, exon 6 of 25) 1785 FBgn0023096 FBgn0023096 FBtr0273418 btv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3734 chr2L 22492658 22492856 + 14 NA Intergenic Intergenic 20275 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3870 chr2LHet 190786 190885 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8603 chr3L 20414850 20415200 + 14 NA exon (FBgn0036985, exon 4 of 4) protein_coding-exon (FBgn0036985, exon 4 of 4) 4146 FBgn0036986 FBgn0036986 FBtr0078233 CG5282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3301 chr2L 20835032 20835196 + 14 NA exon (FBgn0032891, exon 2 of 6) protein_coding-exon (FBgn0032891, exon 2 of 6) 493 FBgn0032891 FBgn0032891 FBtr0290042 Oseg5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9592 chr3R 5155968 5156108 + 14 NA promoter-TSS (FBgn0037677) protein_coding-promoter-TSS (FBgn0037677) 9 FBgn0037677 FBgn0037677 FBtr0082058 CG12951 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_820 chr2L 5820047 5820245 + 14 NA Intergenic Intergenic -1753 FBgn0051644 FBgn0051644 FBtr0079159 CG31644 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11058 chr3R 16058652 16058772 + 14 NA intron (FBgn0083975, intron 12 of 13) protein_coding-intron (FBgn0083975, intron 12 of 13) -23199 FBgn0038775 FBgn0038775 FBtr0083874 CG17199 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2970 chr2L 19112279 19112344 + 14 NA exon (FBgn0000075, exon 1 of 2) protein_coding-exon (FBgn0000075, exon 1 of 2) 467 FBgn0000075 FBgn0000075 FBtr0081154 amd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12021 chr3R 23975541 23975606 + 14 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 2971 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12102 chr3R 24269324 24269616 + 14 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) 25540 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7755 chr3L 12295429 12295606 + 14 NA Intergenic Intergenic -6294 FBgn0036274 FBgn0036274 FBtr0301071 CG4328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4410 chr2R 5235322 5235428 + 14 NA exon (FBgn0033404, exon 2 of 2) protein_coding-exon (FBgn0033404, exon 2 of 2) 2521 FBgn0033404 FBgn0033404 FBtr0088503 Or45a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9511 chr3R 4595154 4595262 + 14 NA promoter-TSS (FBgn0037626) protein_coding-promoter-TSS (FBgn0037626) 92 FBgn0037626 FBgn0037626 FBtr0081916 CG8236 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8464 chr3L 18027090 18027195 + 14 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -6275 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11223 chr3R 17370464 17370670 + 14 NA Intergenic Intergenic -11859 FBgn0263130 FBgn0263130 FBtr0307362 CR43372 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2755 chr2L 17798248 17798333 + 14 NA exon (FBgn0262018, exon 9 of 14) protein_coding-exon (FBgn0262018, exon 9 of 14) 5878 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3230 chr2L 20518370 20518424 + 14 NA Intergenic Intergenic 23291 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13202 chrU 2084807 2084897 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8662 chr3L 21786959 21787046 + 14 NA Intergenic Intergenic 18871 FBgn0260754 FBgn0260754 FBtr0301251 CG42552 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2955 chr2L 19077593 19077687 + 14 NA exon (FBgn0032754, exon 1 of 1) protein_coding-exon (FBgn0032754, exon 1 of 1) 1388 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8972 chr3R 593797 593894 + 14 NA exon (FBgn0037273, exon 1 of 1) protein_coding-exon (FBgn0037273, exon 1 of 1) 122 FBgn0037273 FBgn0037273 FBtr0078883 CG14654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10360 chr3R 11597608 11597685 + 14 NA Intergenic Intergenic -2451 FBgn0038358 FBgn0038358 FBtr0083170 CG4525 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1573 chr2L 11773279 11773400 + 14 NA Intergenic Intergenic -15122 FBgn0032374 FBgn0032374 FBtr0300370 CG14931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_91 chr2L 797326 797424 + 14 NA Intergenic Intergenic -6577 FBgn0000442 FBgn0000442 FBtr0078042 Pkg21D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7394 chr3L 8358658 8358762 + 14 NA Intergenic Intergenic -6670 FBgn0001248 FBgn0001248 FBtr0076671 Idh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11259 chr3R 17641926 17642201 + 14 NA intron (FBgn0013759, intron 8 of 17) protein_coding-intron (FBgn0013759, intron 8 of 17) 6301 FBgn0013759 FBgn0013759 FBtr0084162 CASK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11008 chr3R 15782890 15783006 + 14 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) 8756 FBgn0038756 FBgn0038756 FBtr0083823 CG4783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1788 chr2L 13330617 13330671 + 14 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) 477 FBgn0264308 FBgn0264308 FBtr0331504 CG43778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_45 chr2L 612174 612508 + 14 NA Intergenic Intergenic -3207 FBgn0263658 FBgn0263658 FBtr0310101 CR43649 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11677 chr3R 22476413 22476553 + 14 NA intron (FBgn0250908, intron 8 of 8) protein_coding-intron (FBgn0250908, intron 8 of 8) -5685 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8593 chr3L 20212413 20212585 + 14 NA exon (FBgn0036952, exon 2 of 2) protein_coding-exon (FBgn0036952, exon 2 of 2) 1021 FBgn0036952 FBgn0036952 FBtr0074855 CG6933 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11645 chr3R 22323702 22323756 + 14 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 31934 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4083 chr2R 2777614 2777727 + 14 NA Intergenic Intergenic -1598 FBgn0050158 FBgn0050158 FBtr0086165 CG30158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12012 chr3R 23934168 23934316 + 14 NA Intergenic Intergenic -38360 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10626 chr3R 13296103 13296239 + 14 NA Intergenic Intergenic -13673 FBgn0038512 FBgn0038512 FBtr0083443 CG14330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9068 chr3R 1353733 1353787 + 14 NA exon (FBgn0010051, exon 3 of 19) protein_coding-exon (FBgn0010051, exon 3 of 19) 459 FBgn0010051 FBgn0010051 FBtr0078687 Itp-r83A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11053 chr3R 16022832 16022886 + 14 NA Intergenic Intergenic -7672 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3900 chr2R 140175 140243 + 14 NA Intergenic Intergenic -9765 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_455 chr2L 2963913 2964015 + 14 NA exon (FBgn0010263, exon 9 of 9) protein_coding-exon (FBgn0010263, exon 9 of 9) 5656 FBgn0024920 FBgn0024920 FBtr0077679 Ts protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6022 chr2R 18837292 18837380 + 14 NA Intergenic Intergenic 3987 FBgn0052835 FBgn0052835 FBtr0308941 CR32835 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3278 chr2L 20700936 20701062 + 14 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 13417 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_30 chr2L 367357 367468 + 14 NA Intergenic Intergenic -9538 FBgn0031250 FBgn0031250 FBtr0330651 Ent1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7707 chr3L 11907991 11908119 + 14 NA Intergenic Intergenic -6558 FBgn0036221 FBgn0036221 FBtr0076038 CG11588 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8926 chr3LHet 2268085 2268223 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6428 chr2RHet 935956 936215 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10376 chr3R 11715520 11715630 + 14 NA exon (FBgn0038380, exon 1 of 3) protein_coding-exon (FBgn0038380, exon 1 of 3) 262 FBgn0038380 FBgn0038380 FBtr0083249 CG14877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5536 chr2R 14760561 14760741 + 14 NA Intergenic Intergenic -4979 FBgn0262569 FBgn0262569 FBtr0304896 CG43109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8678 chr3L 22129755 22129898 + 14 NA exon (FBgn0037153, exon 1 of 11) protein_coding-exon (FBgn0037153, exon 1 of 11) 636 FBgn0037153 FBgn0037153 FBtr0301492 olf413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7691 chr3L 11804133 11804187 + 14 NA exon (FBgn0259140, exon 5 of 17) protein_coding-exon (FBgn0259140, exon 5 of 17) 3695 FBgn0259140 FBgn0259140 FBtr0332131 CG42255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10811 chr3R 14426587 14426836 + 14 NA TTS (FBgn0038630) protein_coding-TTS (FBgn0038630) 2233 FBgn0038630 FBgn0038630 FBtr0083636 CG14305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7769 chr3L 12349119 12349261 + 14 NA Intergenic Intergenic -4546 FBgn0036278 FBgn0036278 FBtr0330069 GRHRII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4837 chr2R 8583762 8583938 + 14 NA Intergenic Intergenic -3657 FBgn0033769 FBgn0033769 FBtr0087871 CG8768 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13650 chrX 10711194 10711343 + 14 NA intron (FBgn0262735, intron 1 of 5) protein_coding-intron (FBgn0262735, intron 1 of 5) -3142 FBgn0262735 FBgn0262735 FBtr0073419 Imp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3190 chr2L 20372627 20372739 + 14 NA exon (FBgn0026756, exon 2 of 2) protein_coding-exon (FBgn0026756, exon 2 of 2) 1284 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_33 chr2L 380779 380865 + 14 NA intron (FBgn0000061, intron 1 of 4) protein_coding-intron (FBgn0000061, intron 1 of 4) 2710 FBgn0000061 FBgn0000061 FBtr0078053 al protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6280 chr2R 21005669 21005817 + 14 NA Intergenic Intergenic -11212 FBgn0050430 FBgn0050430 FBtr0072448 CG30430 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9458 chr3R 4223011 4223070 + 14 NA intron (FBgn0263416, intron 9 of 15) protein_coding-intron (FBgn0263416, intron 9 of 15) -9116 FBgn0051462 FBgn0051462 FBtr0081851 CG31462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1468 chr2L 10795003 10795057 + 14 NA intron (FBgn0051869, intron 2 of 7) protein_coding-intron (FBgn0051869, intron 1 of 6) 4788 FBgn0051870 FBgn0051870 FBtr0080138 CG31870 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6813 chr3L 1239197 1239376 + 14 NA promoter-TSS (FBgn0035193) protein_coding-promoter-TSS (FBgn0035193) -967 FBgn0035193 FBgn0035193 FBtr0072734 CG9192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3378 chr2L 21323162 21323261 + 14 NA Intergenic Intergenic -3449 FBgn0261586 FBgn0261586 FBtr0302900 CG42696 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5563 chr2R 14941660 14941751 + 14 NA Intergenic Intergenic 1724 FBgn0034415 FBgn0034415 FBtr0086596 CG15116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4367 chr2R 4918558 4918808 + 14 NA promoter-TSS (FBgn0033365) protein_coding-promoter-TSS (FBgn0033365) -137 FBgn0033365 FBgn0033365 FBtr0110892 CG8170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_516 chr2L 3557117 3557171 + 14 NA Intergenic Intergenic 17409 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11835 chr3R 23216197 23216330 + 14 NA intron (FBgn0016061, intron 11 of 16) protein_coding-intron (FBgn0016061, intron 11 of 16) -20676 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7202 chr3L 6477397 6477487 + 14 NA exon (FBgn0261801, exon 6 of 7) protein_coding-exon (FBgn0261801, exon 6 of 7) 4082 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13518 chrX 3702260 3702392 + 14 NA intron (FBgn0061173, intron 1 of 3) protein_coding-intron (FBgn0061173, intron 1 of 3) 4108 FBgn0061173 FBgn0061173 FBtr0070602 fd3F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3136 chr2L 20002011 20002116 + 14 NA intron (FBgn0264443, intron 1 of 5) protein_coding-intron (FBgn0264443, intron 1 of 5) 15219 FBgn0264443 FBgn0264443 FBtr0332566 CG43861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12929 chr4 540100 540297 + 14 NA intron (FBgn0004607, intron 3 of 12) protein_coding-intron (FBgn0004607, intron 3 of 13) 17762 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_894 chr2L 6547823 6547965 + 14 NA promoter-TSS (FBgn0000320) protein_coding-promoter-TSS (FBgn0000320) 9465 FBgn0031829 FBgn0031829 FBtr0079333 osm-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1439 chr2L 10567539 10567609 + 14 NA exon (FBgn0032268, exon 1 of 1) protein_coding-exon (FBgn0032268, exon 1 of 1) 284 FBgn0032268 FBgn0032268 FBtr0080098 CG6138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_656 chr2L 4499274 4499369 + 14 NA exon (FBgn0053196, exon 66 of 82) protein_coding-exon (FBgn0053196, exon 66 of 82) -22297 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12078 chr3R 24172874 24173004 + 14 NA Intergenic Intergenic -5025 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3090 chr2L 19750368 19750468 + 14 NA exon (FBgn0032817, exon 6 of 8) protein_coding-exon (FBgn0032817, exon 6 of 8) 6449 FBgn0032817 FBgn0032817 FBtr0081324 CG10631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7826 chr3L 12712849 12712969 + 14 NA Intergenic Intergenic 14802 FBgn0261933 FBgn0261933 FBtr0075952 SmD1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3049 chr2L 19605024 19605120 + 14 NA intron (FBgn0000464, intron 2 of 18) protein_coding-intron (FBgn0000464, intron 2 of 17) 18449 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11875 chr3R 23341033 23341256 + 14 NA TTS (FBgn0039522) protein_coding-TTS (FBgn0039522) 1835 FBgn0039522 FBgn0039522 FBtr0085212 CG13972 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10685 chr3R 13669965 13670107 + 14 NA intron (FBgn0261649, intron 3 of 9) protein_coding-intron (FBgn0261649, intron 3 of 9) 32770 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5525 chr2R 14639576 14639657 + 14 NA exon (FBgn0053147, exon 9 of 9) protein_coding-exon (FBgn0053147, exon 9 of 9) -2884 FBgn0034387 FBgn0034387 FBtr0086609 Cyp12b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9369 chr3R 3519370 3519456 + 14 NA exon (FBgn0051146, exon 12 of 12) protein_coding-exon (FBgn0051146, exon 12 of 12) -28726 FBgn0037512 FBgn0037512 FBtr0081738 CG2616 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11705 chr3R 22538926 22539134 + 14 NA intron (FBgn0023179, intron 1 of 11) protein_coding-intron (FBgn0023179, intron 1 of 11) 851 FBgn0023179 FBgn0023179 FBtr0085048 amon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9170 chr3R 2250813 2251020 + 14 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 18337 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11821 chr3R 23186773 23186970 + 14 NA exon (FBgn0260487, exon 3 of 7) protein_coding-exon (FBgn0260487, exon 3 of 7) 1759 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6105 chr2R 19522399 19522528 + 14 NA intron (FBgn0004795, intron 1 of 11) protein_coding-intron (FBgn0004795, intron 1 of 11) 2328 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3763 chr2L 22591116 22591289 + 14 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 53325 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11305 chr3R 18151590 18151678 + 14 NA Intergenic Intergenic -1818 FBgn0263117 FBgn0263117 FBtr0330388 CG34377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11756 chr3R 22857247 22857409 + 14 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -5497 FBgn0039476 FBgn0039476 FBtr0085149 CG6271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4839 chr2R 8587532 8587764 + 14 NA promoter-TSS (FBgn0033770) protein_coding-promoter-TSS (FBgn0033770) 62 FBgn0033770 FBgn0033770 FBtr0113076 wuc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3630 chr2L 22156641 22156860 + 14 NA exon (FBgn0261802, exon 7 of 8) protein_coding-exon (FBgn0261802, exon 7 of 8) 4996 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_761 chr2L 5457644 5457698 + 14 NA Intergenic Intergenic -3970 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12242 chr3R 24798885 24799107 + 14 NA Intergenic Intergenic -2920 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5415 chr2R 13695711 13695847 + 14 NA exon (FBgn0259211, exon 2 of 13) protein_coding-exon (FBgn0259211, exon 2 of 13) -15291 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8316 chr3L 16926679 16926857 + 14 NA intron (FBgn0036678, intron 2 of 4) protein_coding-intron (FBgn0036678, intron 2 of 4) 1868 FBgn0036678 FBgn0036678 FBtr0305576 CG11905 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9691 chr3R 6328994 6329048 + 14 NA Intergenic Intergenic 9757 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5072 chr2R 10528691 10528756 + 14 NA promoter-TSS (FBgn0033950) protein_coding-promoter-TSS (FBgn0033950) -592 FBgn0033950 FBgn0033950 FBtr0087484 CG12862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8402 chr3L 17579600 17579786 + 14 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -20431 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1631 chr2L 12330715 12330977 + 14 NA Intergenic Intergenic -8002 FBgn0051862 FBgn0051862 FBtr0080350 CG31862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9501 chr3R 4513001 4513055 + 14 NA Intergenic Intergenic -7272 FBgn0053325 FBgn0053325 FBtr0307515 CG33325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7103 chr3L 5728400 5728466 + 14 NA intron (FBgn0085447, intron 13 of 21) protein_coding-intron (FBgn0085447, intron 25 of 34) 15043 FBgn0086073 FBgn0086073 FBtr0114349 snoRNA:Me18S-A1494 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7200 chr3L 6472911 6473230 + 14 NA intron (FBgn0261801, intron 4 of 6) protein_coding-intron (FBgn0261801, intron 4 of 6) 8454 FBgn0035702 FBgn0035702 FBtr0076987 CG10147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_689 chr2L 4738288 4738397 + 14 NA exon (FBgn0031627, exon 2 of 7) protein_coding-exon (FBgn0031627, exon 2 of 7) -3884 FBgn0031626 FBgn0031626 FBtr0077419 CG15631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3580 chr2L 22030537 22030628 + 14 NA Intergenic Intergenic -7278 FBgn0084001 FBgn0084001 FBtr0332199 CG41434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8470 chr3L 18060884 18061093 + 14 NA Intergenic Intergenic -3192 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9169 chr3R 2245628 2245702 + 14 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 13086 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_783 chr2L 5585642 5585809 + 14 NA Intergenic Intergenic 2689 FBgn0031723 FBgn0031723 FBtr0079117 CG7251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8349 chr3L 17187862 17187916 + 14 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 27926 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4227 chr2R 3935589 3935796 + 14 NA Intergenic Intergenic 10364 FBgn0033252 FBgn0033252 FBtr0088828 CG12769 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4676 chr2R 7409399 7409516 + 14 NA Intergenic Intergenic 5931 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4062 chr2R 2572468 2572560 + 14 NA TTS (FBgn0033090) protein_coding-TTS (FBgn0033090) 1817 FBgn0033090 FBgn0033090 FBtr0086122 CG15909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5043 chr2R 10232088 10232196 + 14 NA intron (FBgn0085408, intron 1 of 3) protein_coding-intron (FBgn0085408, intron 7 of 9) -7602 FBgn0033924 FBgn0033924 FBtr0087546 CG8613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1298 chr2L 9023719 9023862 + 14 NA TTS (FBgn0032090) protein_coding-TTS (FBgn0032090) 1614 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6803 chr3L 1178936 1179016 + 14 NA Intergenic Intergenic -1700 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5438 chr2R 13856412 13856539 + 14 NA Intergenic Intergenic -12400 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5606 chr2R 15452408 15452472 + 14 NA promoter-TSS (FBgn0053535) tRNA-promoter-TSS (FBgn0053535) 9 FBgn0053535 FBgn0053535 FBtr0100843 tRNA:CR33535 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10609 chr3R 13153000 13153054 + 14 NA exon (FBgn0038498, exon 5 of 7) protein_coding-exon (FBgn0038498, exon 5 of 7) 38812 FBgn0038498 FBgn0038498 FBtr0083453 beat-IIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12585 chr3R 26746437 26746553 + 14 NA intron (FBgn0020912, intron 2 of 4) protein_coding-intron (FBgn0020912, intron 2 of 4) 7885 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7711 chr3L 11918820 11919039 + 14 NA Intergenic Intergenic -1072 FBgn0036222 FBgn0036222 FBtr0076069 CG5718 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12814 chr3R 27834937 27835022 + 14 NA Intergenic Intergenic 22408 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_603 chr2L 4209573 4209640 + 14 NA exon (FBgn0001075, exon 3 of 9) protein_coding-exon (FBgn0001075, exon 3 of 9) 12190 FBgn0001075 FBgn0001075 FBtr0077478 ft protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12471 chr3R 25740924 25741028 + 14 NA promoter-TSS (FBgn0039722) protein_coding-promoter-TSS (FBgn0039722) -908 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2880 chr2L 18307181 18307375 + 14 NA TTS (FBgn0263085) protein_coding-TTS (FBgn0263085) 1406 FBgn0263085 FBgn0263085 FBtr0307102 CG43353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2519 chr2L 16763565 16763685 + 14 NA Intergenic Intergenic -3487 FBgn0032602 FBgn0032602 FBtr0080933 CG13278 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1543 chr2L 11469881 11469935 + 14 NA Intergenic Intergenic -14799 FBgn0003313 FBgn0003313 FBtr0080237 sala protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7661 chr3L 11468098 11468208 + 14 NA promoter-TSS (FBgn0028668) protein_coding-promoter-TSS (FBgn0028668) 95 FBgn0028668 FBgn0028668 FBtr0076091 Vha16-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7064 chr3L 4868911 4869041 + 14 NA exon (FBgn0035581, exon 15 of 52) protein_coding-exon (FBgn0035581, exon 15 of 52) 7672 FBgn0035581 FBgn0035581 FBtr0289983 CG17150 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7933 chr3L 13596990 13597090 + 14 NA intron (FBgn0264001, intron 5 of 13) protein_coding-intron (FBgn0264001, intron 4 of 12) -16897 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4944 chr2R 9370028 9370095 + 14 NA TTS (FBgn0033842) protein_coding-TTS (FBgn0033842) 662 FBgn0000119 FBgn0000119 FBtr0087702 arr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12124 chr3R 24340987 24341103 + 14 NA exon (FBgn0013813, exon 40 of 47) protein_coding-exon (FBgn0013813, exon 40 of 47) 5192 FBgn0051051 FBgn0051051 FBtr0085296 CG31051 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10098 chr3R 9455214 9455478 + 14 NA Intergenic Intergenic -2318 FBgn0038163 FBgn0038163 FBtr0309093 CG10841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8741 chr3L 23524916 23525054 + 14 NA Intergenic Intergenic -24040 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4538 chr2R 6226382 6226436 + 14 NA exon (FBgn0261698, exon 8 of 29) protein_coding-exon (FBgn0261698, exon 8 of 29) 13257 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8992 chr3R 729457 729587 + 14 NA Intergenic Intergenic -2826 FBgn0004913 FBgn0004913 FBtr0100159 Gnf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12922 chr4 397119 397173 + 14 NA exon (FBgn0262636, exon 10 of 10) protein_coding-exon (FBgn0262636, exon 10 of 10) 16543 FBgn0039904 FBgn0039904 FBtr0307379 Hcf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12951 chr4 626212 626288 + 14 NA exon (FBgn0028996, exon 1 of 4) protein_coding-exon (FBgn0028996, exon 1 of 4) 2101 FBgn0028996 FBgn0028996 FBtr0089104 onecut protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5287 chr2R 12354639 12354693 + 14 NA exon (FBgn0261292, exon 2 of 3) protein_coding-exon (FBgn0261292, exon 2 of 3) 452 FBgn0261292 FBgn0261292 FBtr0091520 CheB53a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1789 chr2L 13336729 13336862 + 14 NA Intergenic Intergenic -5674 FBgn0264308 FBgn0264308 FBtr0331504 CG43778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9333 chr3R 3172367 3172421 + 14 NA promoter-TSS (FBgn0051501) protein_coding-promoter-TSS (FBgn0051501) -161 FBgn0051501 FBgn0051501 FBtr0081583 nxf4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2524 chr2L 16808615 16809006 + 14 NA intron (FBgn0086673, intron 1 of 2) protein_coding-intron (FBgn0086673, intron 1 of 2) 3926 FBgn0086673 FBgn0086673 FBtr0080914 CG13272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7094 chr3L 5488983 5489160 + 14 NA Intergenic Intergenic 2987 FBgn0035608 FBgn0035608 FBtr0077152 blanks protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5263 chr2R 12138936 12138990 + 14 NA intron (FBgn0261612, intron 3 of 8) protein_coding-intron (FBgn0261612, intron 3 of 8) 8037 FBgn0261612 FBgn0261612 FBtr0302924 Cng protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5886 chr2R 17485475 17485636 + 14 NA Intergenic Intergenic 7664 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3336 chr2L 21067642 21067707 + 14 NA intron (FBgn0032910, intron 1 of 7) protein_coding-intron (FBgn0032910, intron 1 of 7) 2607 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9112 chr3R 1857372 1857547 + 14 NA Intergenic Intergenic 3970 FBgn0037397 FBgn0037397 FBtr0307114 CR1075 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_8771 chr3L 23742461 23742515 + 14 NA TTS (FBgn0040056) protein_coding-TTS (FBgn0040056) 11428 FBgn0040056 FBgn0040056 FBtr0333914 CG17698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10727 chr3R 13900834 13900989 + 14 NA Intergenic Intergenic -5932 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5529 chr2R 14654232 14654325 + 14 NA promoter-TSS (FBgn0034389) protein_coding-promoter-TSS (FBgn0034389) -303 FBgn0034389 FBgn0034389 FBtr0110971 Mctp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5672 chr2R 15885470 15885554 + 14 NA Intergenic Intergenic 2361 FBgn0050212 FBgn0050212 FBtr0086326 tRNA:CR30212 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13581 chrX 7040747 7040806 + 14 NA exon (FBgn0047092, exon 3 of 3) ncRNA-exon (FBgn0047092, exon 3 of 3) 3107 FBgn0047092 FBgn0047092 FBtr0071016 CR32730 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4106 chr2R 3048781 3048924 + 14 NA intron (FBgn0003090, intron 1 of 5) protein_coding-intron (FBgn0003090, intron 1 of 5) -3119 FBgn0002930 FBgn0002930 FBtr0089052 nec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8877 chr3LHet 1047619 1047743 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1123 chr2L 8614724 8614834 + 14 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -5249 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13373 chrUextra 16461038 16461132 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12180 chr3R 24561407 24561696 + 14 NA Intergenic Intergenic 8934 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9006 chr3R 812505 812590 + 14 NA promoter-TSS (FBgn0263343) ncRNA-promoter-TSS (FBgn0263343) -705 FBgn0263343 FBgn0263343 FBtr0308777 CR43424 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12788 chr3R 27685387 27685596 + 14 NA intron (FBgn0011224, intron 13 of 16) protein_coding-intron (FBgn0011224, intron 10 of 13) 33925 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3331 chr2L 21062492 21062569 + 14 NA exon (FBgn0032910, exon 2 of 8) protein_coding-exon (FBgn0032910, exon 2 of 8) 7751 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9676 chr3R 6246745 6246904 + 14 NA Intergenic Intergenic -5058 FBgn0037816 FBgn0037816 FBtr0082258 CG6345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11183 chr3R 17101469 17101767 + 14 NA TTS (FBgn0038880) protein_coding-TTS (FBgn0038880) 355 FBgn0038878 FBgn0038878 FBtr0084100 CG3301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8033 chr3L 14258042 14258192 + 14 NA Intergenic Intergenic -9326 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5833 chr2R 17283227 17283281 + 14 NA intron (FBgn0010415, intron 3 of 4) protein_coding-intron (FBgn0010415, intron 4 of 5) 6353 FBgn0034629 FBgn0034629 FBtr0071607 Acox57D-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5052 chr2R 10320683 10320811 + 14 NA promoter-TSS (FBgn0013725) protein_coding-promoter-TSS (FBgn0013725) -907 FBgn0013725 FBgn0013725 FBtr0087516 phyl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_92 chr2L 800058 800218 + 14 NA Intergenic Intergenic -9340 FBgn0000442 FBgn0000442 FBtr0078042 Pkg21D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5284 chr2R 12327582 12327636 + 14 NA Intergenic Intergenic -3132 FBgn0034128 FBgn0034128 FBtr0113085 CG4409 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6272 chr2R 20964594 20964656 + 14 NA promoter-TSS (FBgn0050200) tRNA-promoter-TSS (FBgn0050200) 54 FBgn0050200 FBgn0050200 FBtr0072447 tRNA:CR30200 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8757 chr3L 23606438 23606760 + 14 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 57574 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8187 chr3L 15938912 15939028 + 14 NA intron (FBgn0000489, intron 2 of 7) protein_coding-intron (FBgn0000489, intron 3 of 8) 7123 FBgn0000489 FBgn0000489 FBtr0075528 Pka-C3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12958 chr4 723617 723704 + 14 NA intron (FBgn0005558, intron 1 of 7) protein_coding-intron (FBgn0005558, intron 1 of 7) -2043 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8010 chr3L 14118582 14118675 + 14 NA exon (FBgn0042630, exon 2 of 7) protein_coding-exon (FBgn0042630, exon 2 of 7) 5769 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12939 chr4 554173 554357 + 14 NA exon (FBgn0004607, exon 11 of 14) protein_coding-exon (FBgn0004607, exon 11 of 14) 24215 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4369 chr2R 4924433 4924565 + 14 NA Intergenic Intergenic 5148 FBgn0033366 FBgn0033366 FBtr0088664 Ance-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12513 chr3R 26151596 26151890 + 14 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) -19384 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7679 chr3L 11708785 11708839 + 14 NA promoter-TSS (FBgn0040817) protein_coding-promoter-TSS (FBgn0040817) -427 FBgn0040817 FBgn0040817 FBtr0113334 CG14132 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5851 chr2R 17446589 17446674 + 14 NA exon (FBgn0003731, exon 5 of 5) protein_coding-exon (FBgn0003731, exon 5 of 5) 11557 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5278 chr2R 12290547 12290601 + 14 NA intron (FBgn0264273, intron 2 of 15) protein_coding-intron (FBgn0264273, intron 1 of 13) 16329 FBgn0029153 FBgn0029153 FBtr0100603 Menl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6056 chr2R 19035052 19035249 + 14 NA Intergenic Intergenic -5065 FBgn0262843 FBgn0262843 FBtr0306079 CG43207 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13344 chrUextra 5254701 5254997 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5490 chr2R 14347321 14347498 + 14 NA exon (FBgn0028496, exon 18 of 18) protein_coding-exon (FBgn0028496, exon 18 of 18) -5442 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13549 chrX 5611462 5611516 + 14 NA exon (FBgn0053080, exon 1 of 6) protein_coding-exon (FBgn0053080, exon 1 of 6) -3929 FBgn0053080 FBgn0053080 FBtr0070845 CG33080 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_70 chr2L 752354 752471 + 14 NA promoter-TSS (FBgn0031275) protein_coding-promoter-TSS (FBgn0031275) 1803 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7104 chr3L 5733496 5733591 + 14 NA exon (FBgn0085447, exon 33 of 33) protein_coding-exon (FBgn0085447, exon 33 of 33) 11746 FBgn0263106 FBgn0263106 FBtr0077124 DnaJ-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11030 chr3R 15907923 15908106 + 14 NA exon (FBgn0003249, exon 1 of 1) protein_coding-exon (FBgn0003249, exon 1 of 1) 158 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9350 chr3R 3297773 3297863 + 14 NA promoter-TSS (FBgn0012000) tRNA-promoter-TSS (FBgn0012000) 36 FBgn0012000 FBgn0012000 FBtr0081561 tRNA:V3b:84Dc tRNA Nup98-S2-pascual-garcia2017_R1_peak_7880 chr3L 13197803 13197961 + 14 NA Intergenic Intergenic -6432 FBgn0052129 FBgn0052129 FBtr0075828 tRNA:CR32129 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1900 chr2L 14250102 14250270 + 14 NA Intergenic Intergenic -12841 FBgn0261563 FBgn0261563 FBtr0302735 wb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11733 chr3R 22675843 22676054 + 14 NA intron (FBgn0051072, intron 11 of 17) protein_coding-intron (FBgn0051072, intron 11 of 17) 11145 FBgn0262379 FBgn0262379 FBtr0304222 mir-1012 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2985 chr2L 19225487 19225541 + 14 NA Intergenic Intergenic 35168 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3400 chr2L 21386227 21386442 + 14 NA intron (FBgn0032946, intron 4 of 7) protein_coding-intron (FBgn0032946, intron 4 of 7) 6334 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2093 chr2L 14809605 14809659 + 14 NA Intergenic Intergenic -1156 FBgn0053309 FBgn0053309 FBtr0080674 CG33309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13028 chr4 1187986 1188040 + 14 NA exon (FBgn0039925, exon 5 of 5) protein_coding-exon (FBgn0039925, exon 5 of 5) 14229 FBgn0002521 FBgn0002521 FBtr0089205 pho protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4687 chr2R 7432197 7432251 + 14 NA Intergenic Intergenic -16836 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5017 chr2R 9942766 9942961 + 14 NA intron (FBgn0002643, intron 3 of 5) protein_coding-intron (FBgn0002643, intron 4 of 6) 23679 FBgn0002643 FBgn0002643 FBtr0087598 mam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2448 chr2L 16290314 16290722 + 14 NA promoter-TSS (FBgn0028896) protein_coding-promoter-TSS (FBgn0028896) -766 FBgn0028896 FBgn0028896 FBtr0080827 CG17329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4464 chr2R 5657389 5657497 + 14 NA intron (FBgn0027589, intron 7 of 8) protein_coding-intron (FBgn0027589, intron 7 of 8) -11870 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1461 chr2L 10708316 10708408 + 14 NA Intergenic Intergenic -2172 FBgn0024740 FBgn0024740 FBtr0080123 Lip2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3160 chr2L 20141847 20141901 + 14 NA Intergenic Intergenic -6951 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3799 chr2L 22671542 22671677 + 14 NA Intergenic Intergenic 19399 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9474 chr3R 4336309 4336427 + 14 NA exon (FBgn0037590, exon 1 of 3) protein_coding-exon (FBgn0037590, exon 1 of 3) 712 FBgn0037590 FBgn0037590 FBtr0081900 Or85b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5754 chr2R 16587818 16587995 + 14 NA intron (FBgn0040726, intron 1 of 7) protein_coding-intron (FBgn0040726, intron 1 of 7) 1551 FBgn0040726 FBgn0040726 FBtr0086238 dpr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5282 chr2R 12313208 12313545 + 14 NA exon (FBgn0264273, exon 9 of 14) protein_coding-exon (FBgn0264273, exon 9 of 14) -6373 FBgn0034126 FBgn0034126 FBtr0087157 CG4398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8074 chr3L 14656308 14656362 + 14 NA intron (FBgn0041604, intron 1 of 7) protein_coding-intron (FBgn0041604, intron 1 of 7) 9202 FBgn0262581 FBgn0262581 FBtr0304960 CG43121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10711 chr3R 13837287 13837341 + 14 NA exon (FBgn0263995, exon 10 of 12) protein_coding-exon (FBgn0263995, exon 10 of 12) -7783 FBgn0000477 FBgn0000477 FBtr0083538 DNaseII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6456 chr2RHet 1304911 1305111 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5825 chr2R 17234922 17235098 + 14 NA TTS (FBgn0034624) protein_coding-TTS (FBgn0034624) 346 FBgn0034623 FBgn0034623 FBtr0071612 CG9822 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12853 chr3RHet 907619 907673 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_965 chr2L 7141608 7141717 + 14 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -8135 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2186 chr2L 15183485 15183626 + 14 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 16854 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1353 chr2L 9549419 9549477 + 14 NA exon (FBgn0032129, exon 9 of 9) protein_coding-exon (FBgn0032129, exon 9 of 9) 3637 FBgn0032127 FBgn0032127 FBtr0273329 CG13114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10270 chr3R 11001967 11002091 + 14 NA intron (FBgn0038294, intron 4 of 7) protein_coding-intron (FBgn0038294, intron 4 of 5) 3963 FBgn0038294 FBgn0038294 FBtr0306642 Mf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6039 chr2R 18931483 18931553 + 14 NA Intergenic Intergenic -1056 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_200 chr2L 1287539 1287624 + 14 NA exon (FBgn0041097, exon 9 of 12) protein_coding-exon (FBgn0041097, exon 9 of 12) 31155 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5776 chr2R 16793192 16793267 + 14 NA Intergenic Intergenic -2329 FBgn0015524 FBgn0015524 FBtr0110772 otp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10091 chr3R 9428136 9428274 + 14 NA Intergenic Intergenic 5338 FBgn0261818 FBgn0261818 FBtr0303306 CG42760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5505 chr2R 14406760 14406885 + 14 NA exon (FBgn0262476, exon 2 of 11) protein_coding-exon (FBgn0262476, exon 2 of 11) 4693 FBgn0262476 FBgn0262476 FBtr0304867 CG43066 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2910 chr2L 18593006 18593060 + 14 NA exon (FBgn0032688, exon 5 of 8) protein_coding-exon (FBgn0032688, exon 5 of 8) 2136 FBgn0032688 FBgn0032688 FBtr0081070 CG15160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6537 chr2RHet 1907032 1907127 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13830 chrX 19800895 19800976 + 14 NA TTS (FBgn0052529) protein_coding-TTS (FBgn0052529) 3619 FBgn0052821 FBgn0052821 FBtr0307588 CR32821 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7756 chr3L 12300507 12300652 + 14 NA Intergenic Intergenic -11356 FBgn0036274 FBgn0036274 FBtr0301071 CG4328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12738 chr3R 27387073 27387235 + 14 NA exon (FBgn0039852, exon 7 of 9) protein_coding-exon (FBgn0039852, exon 7 of 9) -10711 FBgn0028968 FBgn0028968 FBtr0330096 gammaCop protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6111 chr2R 19538485 19538617 + 14 NA exon (FBgn0004795, exon 7 of 12) protein_coding-exon (FBgn0004795, exon 7 of 12) -6543 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5388 chr2R 13379789 13379855 + 14 NA exon (FBgn0050104, exon 6 of 7) protein_coding-exon (FBgn0050104, exon 6 of 7) -1445 FBgn0050103 FBgn0050103 FBtr0086929 CG30103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7345 chr3L 7754963 7755091 + 14 NA exon (FBgn0001208, exon 2 of 5) protein_coding-exon (FBgn0001208, exon 2 of 5) 560 FBgn0001208 FBgn0001208 FBtr0100225 Hn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5465 chr2R 14092217 14092377 + 14 NA Intergenic Intergenic -2963 FBgn0050114 FBgn0050114 FBtr0086753 CG30114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6072 chr2R 19226763 19226921 + 14 NA Intergenic Intergenic -7316 FBgn0034846 FBgn0034846 FBtr0290285 CG9863 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9407 chr3R 3819375 3819482 + 14 NA intron (FBgn0037534, intron 1 of 5) protein_coding-intron (FBgn0037534, intron 1 of 5) 2140 FBgn0037534 FBgn0037534 FBtr0081823 CG2781 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2620 chr2L 17176994 17177148 + 14 NA exon (FBgn0045487, exon 2 of 3) protein_coding-exon (FBgn0045487, exon 2 of 3) 453 FBgn0045487 FBgn0045487 FBtr0080962 Gr36a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2348 chr2L 15864677 15864779 + 14 NA TTS (FBgn0261925) protein_coding-TTS (FBgn0261925) 701 FBgn0261925 FBgn0261925 FBtr0303589 CG42792 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10667 chr3R 13560955 13561009 + 14 NA TTS (FBgn0038540) protein_coding-TTS (FBgn0038540) -1351 FBgn0038541 FBgn0038541 FBtr0083512 TyrRII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6365 chr2RHet 538869 538974 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12635 chr3R 26959929 26960140 + 14 NA promoter-TSS (FBgn0013973) protein_coding-promoter-TSS (FBgn0013973) -80 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5026 chr2R 10088565 10088803 + 14 NA promoter-TSS (FBgn0033911) protein_coding-promoter-TSS (FBgn0033911) 15 FBgn0033911 FBgn0033911 FBtr0087577 VGAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10509 chr3R 12500100 12500276 + 14 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -18699 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5888 chr2R 17486522 17486654 + 14 NA Intergenic Intergenic 7870 FBgn0034638 FBgn0034638 FBtr0071691 CG10433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2405 chr2L 16068929 16069050 + 14 NA intron (FBgn0013433, intron 2 of 7) protein_coding-intron (FBgn0013433, intron 2 of 7) 18994 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1419 chr2L 10124342 10124428 + 14 NA intron (FBgn0083945, intron 12 of 12) protein_coding-intron (FBgn0083945, intron 12 of 12) -1614 FBgn0032184 FBgn0032184 FBtr0079966 CG13135 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_779 chr2L 5575972 5576204 + 14 NA Intergenic Intergenic 5028 FBgn0031722 FBgn0031722 FBtr0079120 CG14011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12026 chr3R 23984438 23984634 + 14 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 11934 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5380 chr2R 13271948 13272025 + 14 NA Intergenic Intergenic 7364 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2987 chr2L 19234173 19234227 + 14 NA Intergenic Intergenic 28693 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5637 chr2R 15654359 15654440 + 14 NA promoter-TSS (FBgn0053353) rRNA-promoter-TSS (FBgn0053353) -616 FBgn0053353 FBgn0053353 FBtr0086345 5SrRNA:CR33353 rRNA Nup98-S2-pascual-garcia2017_R1_peak_649 chr2L 4473716 4473866 + 14 NA promoter-TSS (FBgn0011603) protein_coding-promoter-TSS (FBgn0011603) 3233 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9721 chr3R 6496558 6496612 + 14 NA Intergenic Intergenic 6307 FBgn0037818 FBgn0037818 FBtr0082323 CG6465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2894 chr2L 18437200 18437308 + 14 NA Intergenic Intergenic 5974 FBgn0261597 FBgn0261597 FBtr0081090 RpS26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1114 chr2L 8593995 8594431 + 14 NA exon (FBgn0264437, exon 1 of 2) ncRNA-exon (FBgn0264437, exon 1 of 2) 276 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1750 chr2L 12977841 12978034 + 14 NA promoter-TSS (FBgn0032464) protein_coding-promoter-TSS (FBgn0032464) -849 FBgn0032464 FBgn0032464 FBtr0080421 Vha68-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9176 chr3R 2303929 2304029 + 14 NA promoter-TSS (FBgn0037448) protein_coding-promoter-TSS (FBgn0037448) -8732 FBgn0037448 FBgn0037448 FBtr0308036 CG15186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8828 chr3L 24157787 24157841 + 14 NA intron (FBgn0011288, intron 4 of 6) protein_coding-intron (FBgn0011288, intron 4 of 7) 90485 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11642 chr3R 22317253 22317307 + 14 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 25485 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_562 chr2L 3834110 3834255 + 14 NA Intergenic Intergenic -2660 FBgn0004567 FBgn0004567 FBtr0077500 slp2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11430 chr3R 20531767 20531997 + 14 NA exon (FBgn0003429, exon 21 of 25) protein_coding-exon (FBgn0003429, exon 21 of 25) -8624 FBgn0039217 FBgn0039217 FBtr0084687 CG13627 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4428 chr2R 5388977 5389119 + 14 NA exon (FBgn0004360, exon 2 of 5) protein_coding-exon (FBgn0004360, exon 2 of 5) -2245 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1247 chr2L 8870269 8870491 + 14 NA Intergenic Intergenic 3613 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7757 chr3L 12304158 12304285 + 14 NA Intergenic Intergenic -14998 FBgn0036274 FBgn0036274 FBtr0301071 CG4328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8716 chr3L 23047062 23047116 + 14 NA Intergenic Intergenic 41482 FBgn0024733 FBgn0024733 FBtr0299870 RpL10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1328 chr2L 9306973 9307048 + 14 NA Intergenic Intergenic -2003 FBgn0262033 FBgn0262033 FBtr0303929 CG42844 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5537 chr2R 14763666 14763796 + 14 NA Intergenic Intergenic -2168 FBgn0034408 FBgn0034408 FBtr0086569 sano protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7056 chr3L 4624618 4624712 + 14 NA intron (FBgn0262733, intron 2 of 7) protein_coding-intron (FBgn0262733, intron 2 of 7) 1467 FBgn0262733 FBgn0262733 FBtr0302594 Src64B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3854 chr2L 22924369 22924638 + 14 NA Intergenic Intergenic -5943 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13052 chrU 65414 65559 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5612 chr2R 15485556 15485638 + 14 NA intron (FBgn0003435, intron 2 of 8) protein_coding-intron (FBgn0003435, intron 3 of 9) 4302 FBgn0034459 FBgn0034459 FBtr0300829 CG16716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7993 chr3L 13979837 13980168 + 14 NA promoter-TSS (FBgn0036394) protein_coding-promoter-TSS (FBgn0036394) 282 FBgn0036393 FBgn0036393 FBtr0333024 CG17362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11669 chr3R 22452626 22452680 + 14 NA promoter-TSS (FBgn0039438) protein_coding-promoter-TSS (FBgn0039438) -234 FBgn0039438 FBgn0039438 FBtr0085054 TwdlO protein_coding Nup98-S2-pascual-garcia2017_R1_peak_81 chr2L 762055 762183 + 14 NA TTS (FBgn0031275) protein_coding-TTS (FBgn0031275) -11428 FBgn0031276 FBgn0031276 FBtr0078003 CG12506 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8982 chr3R 669497 669637 + 14 NA Intergenic Intergenic -8968 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7710 chr3L 11917259 11917375 + 14 NA exon (FBgn0036222, exon 1 of 1) protein_coding-exon (FBgn0036222, exon 1 of 1) 540 FBgn0036222 FBgn0036222 FBtr0076069 CG5718 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7493 chr3L 9303896 9304061 + 14 NA Intergenic Intergenic -24811 FBgn0035975 FBgn0035975 FBtr0076433 PGRP-LA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10072 chr3R 9301655 9301857 + 14 NA Intergenic Intergenic -9928 FBgn0040554 FBgn0040554 FBtr0309274 CR17025 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_95 chr2L 806454 806559 + 14 NA Intergenic Intergenic -4071 FBgn0051658 FBgn0051658 FBtr0078008 Nnf1b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2995 chr2L 19269101 19269307 + 14 NA Intergenic Intergenic -6311 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8318 chr3L 16934750 16934955 + 14 NA intron (FBgn0036680, intron 1 of 3) protein_coding-intron (FBgn0036680, intron 1 of 3) 1197 FBgn0036680 FBgn0036680 FBtr0113176 Cpr73D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2174 chr2L 15141107 15141254 + 14 NA Intergenic Intergenic -8791 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_6864 chr3L 1815831 1815921 + 14 NA intron (FBgn0027790, intron 2 of 3) protein_coding-intron (FBgn0027790, intron 2 of 4) 5288 FBgn0027790 FBgn0027790 FBtr0072785 GV1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_821 chr2L 5820981 5821190 + 14 NA Intergenic Intergenic -2692 FBgn0051644 FBgn0051644 FBtr0079159 CG31644 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5363 chr2R 13137489 13137679 + 14 NA intron (FBgn0261642, intron 2 of 9) protein_coding-intron (FBgn0261642, intron 2 of 9) -2696 FBgn0046294 FBgn0046294 FBtr0300762 CG12699 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13012 chr4 1024275 1024389 + 14 NA intron (FBgn0019650, intron 5 of 8) protein_coding-intron (FBgn0019650, intron 5 of 8) 13981 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4608 chr2R 6826750 6826874 + 14 NA TTS (FBgn0033574) protein_coding-TTS (FBgn0033574) 2394 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8212 chr3L 16069098 16069166 + 14 NA intron (FBgn0005536, intron 2 of 6) protein_coding-intron (FBgn0005536, intron 2 of 6) -6519 FBgn0053258 FBgn0053258 FBtr0301030 CG33258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4202 chr2R 3837605 3837761 + 14 NA promoter-TSS (FBgn0050378) protein_coding-promoter-TSS (FBgn0050378) -161 FBgn0050378 FBgn0050378 FBtr0088854 CG30378 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_588 chr2L 4136256 4136354 + 14 NA Intergenic Intergenic -12974 FBgn0031585 FBgn0031585 FBtr0077468 CG2955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10166 chr3R 9964957 9965011 + 14 NA Intergenic Intergenic -7193 FBgn0038207 FBgn0038207 FBtr0082908 CG14356 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9518 chr3R 4701109 4701318 + 14 NA intron (FBgn0262614, intron 2 of 13) protein_coding-intron (FBgn0262614, intron 2 of 13) 12558 FBgn0053551 FBgn0053551 FBtr0091521 tRNA:R:85Cb tRNA Nup98-S2-pascual-garcia2017_R1_peak_1528 chr2L 11338933 11339072 + 14 NA Intergenic Intergenic 4261 FBgn0032360 FBgn0032360 FBtr0080251 CG14926 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7217 chr3L 6692560 6692614 + 14 NA intron (FBgn0035710, intron 1 of 5) protein_coding-intron (FBgn0035710, intron 2 of 6) -6833 FBgn0035710 FBgn0035710 FBtr0076960 SP1173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13517 chrX 3699879 3700006 + 14 NA intron (FBgn0061173, intron 1 of 3) protein_coding-intron (FBgn0061173, intron 1 of 3) 1724 FBgn0061173 FBgn0061173 FBtr0070602 fd3F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11699 chr3R 22528383 22528445 + 14 NA exon (FBgn0023179, exon 3 of 12) protein_coding-exon (FBgn0023179, exon 3 of 12) -9169 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7747 chr3L 12225793 12225923 + 14 NA intron (FBgn0260941, intron 2 of 9) protein_coding-intron (FBgn0260941, intron 3 of 9) 13290 FBgn0264723 FBgn0264723 FBtr0334104 CG43991 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2353 chr2L 15882185 15882270 + 14 NA Intergenic Intergenic -2162 FBgn0028935 FBgn0028935 FBtr0306681 CG7653 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10215 chr3R 10460121 10460302 + 14 NA promoter-TSS (FBgn0038247) protein_coding-promoter-TSS (FBgn0038247) -264 FBgn0038247 FBgn0038247 FBtr0082965 Cad88C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11806 chr3R 23149923 23150038 + 14 NA Intergenic Intergenic -1933 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12250 chr3R 24832322 24832500 + 14 NA intron (FBgn0039620, intron 1 of 9) protein_coding-intron (FBgn0039620, intron 1 of 9) 2143 FBgn0263579 FBgn0263579 FBtr0309743 mir-4947 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2845 chr2L 18101716 18101937 + 14 NA Intergenic Intergenic 5258 FBgn0032664 FBgn0032664 FBtr0081033 CG5755 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5145 chr2R 11042823 11042928 + 14 NA promoter-TSS (FBgn0013467) protein_coding-promoter-TSS (FBgn0013467) -67 FBgn0013467 FBgn0013467 FBtr0087362 igl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10037 chr3R 9033029 9033184 + 14 NA Intergenic Intergenic 7081 FBgn0038126 FBgn0038126 FBtr0082782 CG8483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13163 chrU 1307812 1307866 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8168 chr3L 15745901 15745955 + 14 NA Intergenic Intergenic -24398 FBgn0010105 FBgn0010105 FBtr0075579 comm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5735 chr2R 16362850 16362994 + 14 NA intron (FBgn0086604, intron 18 of 19) protein_coding-intron (FBgn0086604, intron 19 of 20) -28198 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2837 chr2L 18079019 18079308 + 14 NA exon (FBgn0000120, exon 2 of 4) protein_coding-exon (FBgn0000120, exon 2 of 4) 894 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4885 chr2R 8904639 8904760 + 14 NA Intergenic Intergenic 20693 FBgn0008654 FBgn0008654 FBtr0087793 Su(z)2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_828 chr2L 5878759 5878901 + 14 NA intron (FBgn0031745, intron 1 of 3) protein_coding-intron (FBgn0031745, intron 1 of 3) 651 FBgn0031745 FBgn0031745 FBtr0079158 CG8965 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3221 chr2L 20498928 20499269 + 14 NA Intergenic Intergenic 3992 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2960 chr2L 19083279 19083701 + 14 NA promoter-TSS (FBgn0002023) protein_coding-promoter-TSS (FBgn0002023) -4462 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11703 chr3R 22533252 22533354 + 14 NA intron (FBgn0023179, intron 1 of 11) protein_coding-intron (FBgn0023179, intron 1 of 11) 6578 FBgn0023179 FBgn0023179 FBtr0085048 amon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4983 chr2R 9664336 9664570 + 14 NA intron (FBgn0033867, intron 4 of 4) protein_coding-intron (FBgn0033867, intron 4 of 4) 3297 FBgn0033868 FBgn0033868 FBtr0332255 S-Lap7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4156 chr2R 3315181 3315350 + 14 NA TTS (FBgn0033168) protein_coding-TTS (FBgn0033168) 833 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5035 chr2R 10195579 10195742 + 14 NA promoter-TSS (FBgn0085408) protein_coding-promoter-TSS (FBgn0085408) -5802 FBgn0033921 FBgn0033921 FBtr0087562 tej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2868 chr2L 18271169 18271262 + 14 NA exon (FBgn0261804, exon 2 of 15) protein_coding-exon (FBgn0261804, exon 2 of 15) 4555 FBgn0261804 FBgn0261804 FBtr0303280 CG42750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5416 chr2R 13697603 13697752 + 14 NA intron (FBgn0259211, intron 2 of 15) protein_coding-intron (FBgn0259211, intron 2 of 12) -13393 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8337 chr3L 17140307 17140537 + 14 NA exon (FBgn0260943, exon 1 of 11) protein_coding-exon (FBgn0260943, exon 1 of 11) -19541 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2082 chr2L 14775590 14775711 + 14 NA promoter-TSS (FBgn0032549) protein_coding-promoter-TSS (FBgn0032549) -669 FBgn0032549 FBgn0032549 FBtr0301695 CG4650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_664 chr2L 4548654 4548734 + 14 NA exon (FBgn0053196, exon 12 of 47) protein_coding-exon (FBgn0053196, exon 12 of 47) 29507 FBgn0031613 FBgn0031613 FBtr0077444 HP6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7070 chr3L 4940764 4940886 + 14 NA intron (FBgn0005775, intron 7 of 7) protein_coding-intron (FBgn0005775, intron 4 of 4) -9687 FBgn0263618 FBgn0263618 FBtr0309984 CR43627 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1510 chr2L 11206537 11206708 + 14 NA promoter-TSS (FBgn0264441) ncRNA-promoter-TSS (FBgn0264441) -530 FBgn0264441 FBgn0264441 FBtr0332563 CR43859 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1643 chr2L 12377203 12377341 + 14 NA intron (FBgn0262475, intron 2 of 6) protein_coding-intron (FBgn0262475, intron 5 of 9) 20831 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3598 chr2L 22065853 22065907 + 14 NA promoter-TSS (FBgn0260996) protein_coding-promoter-TSS (FBgn0260996) -600 FBgn0260996 FBgn0260996 FBtr0301799 CG42597 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8365 chr3L 17270702 17270773 + 14 NA Intergenic Intergenic 13221 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1762 chr2L 13042026 13042115 + 14 NA intron (FBgn0262160, intron 2 of 6) protein_coding-intron (FBgn0262160, intron 2 of 6) 18045 FBgn0262160 FBgn0262160 FBtr0089956 CG9932 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11160 chr3R 16756306 16756508 + 14 NA exon (FBgn0051191, exon 2 of 6) protein_coding-exon (FBgn0051191, exon 2 of 6) 668 FBgn0051191 FBgn0051191 FBtr0302412 CG31191 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2417 chr2L 16096549 16096692 + 14 NA TTS (FBgn0028520) protein_coding-TTS (FBgn0028520) 1611 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1978 chr2L 14427937 14428020 + 14 NA Intergenic Intergenic -2847 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2663 chr2L 17332659 17332756 + 14 NA Intergenic Intergenic -20887 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8649 chr3L 21591899 21592010 + 14 NA promoter-TSS (FBgn0261953) protein_coding-promoter-TSS (FBgn0261953) 4257 FBgn0264568 FBgn0264568 FBtr0333469 CR43940 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9795 chr3R 7105157 7105237 + 14 NA intron (FBgn0051386, intron 3 of 4) ncRNA-intron (FBgn0051386, intron 3 of 4) -23352 FBgn0262972 FBgn0262972 FBtr0306728 CR43283 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7434 chr3L 8733068 8733198 + 14 NA exon (FBgn0003149, exon 5 of 9) protein_coding-exon (FBgn0003149, exon 5 of 9) -1126 FBgn0003149 FBgn0003149 FBtr0306639 Prm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4142 chr2R 3291041 3291245 + 14 NA promoter-TSS (FBgn0262948) protein_coding-promoter-TSS (FBgn0262948) -397 FBgn0262948 FBgn0262948 FBtr0306554 CG43267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12757 chr3R 27513069 27513198 + 14 NA Intergenic Intergenic -7531 FBgn0039864 FBgn0039864 FBtr0085867 CG11550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1660 chr2L 12589567 12589715 + 14 NA intron (FBgn0085424, intron 1 of 5) protein_coding-intron (FBgn0085424, intron 1 of 5) -28707 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8332 chr3L 17090271 17090349 + 14 NA intron (FBgn0260943, intron 7 of 14) protein_coding-intron (FBgn0260943, intron 7 of 14) 41597 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9078 chr3R 1539375 1539523 + 14 NA TTS (FBgn0261261) protein_coding-TTS (FBgn0261261) 3573 FBgn0004878 FBgn0004878 FBtr0078725 cas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8217 chr3L 16165728 16165852 + 14 NA Intergenic Intergenic -1310 FBgn0053795 FBgn0053795 FBtr0091799 CG33795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6244 chr2R 20704370 20704488 + 14 NA intron (FBgn0000157, intron 1 of 4) protein_coding-intron (FBgn0000157, intron 1 of 5) 2076 FBgn0000157 FBgn0000157 FBtr0300076 Dll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12882 chr3RHet 1843315 1843369 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3610 chr2L 22079796 22079963 + 14 NA exon (FBgn0032971, exon 1 of 1) protein_coding-exon (FBgn0032971, exon 1 of 1) 207 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12304 chr3R 25172508 25172622 + 14 NA Intergenic Intergenic -27229 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1219 chr2L 8827160 8827701 + 14 NA exon (FBgn0029123, exon 1 of 1) protein_coding-exon (FBgn0029123, exon 1 of 1) 1805 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7748 chr3L 12234345 12234443 + 14 NA intron (FBgn0260941, intron 2 of 11) protein_coding-intron (FBgn0260941, intron 2 of 9) 4754 FBgn0264723 FBgn0264723 FBtr0334104 CG43991 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5836 chr2R 17307955 17308086 + 14 NA intron (FBgn0010415, intron 2 of 6) protein_coding-intron (FBgn0010415, intron 2 of 5) -3451 FBgn0010415 FBgn0010415 FBtr0301557 Sdc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10328 chr3R 11418192 11418391 + 14 NA Intergenic Intergenic -39797 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10213 chr3R 10440563 10440674 + 14 NA intron (FBgn0038246, intron 1 of 6) protein_coding-intron (FBgn0038246, intron 1 of 6) 5254 FBgn0038246 FBgn0038246 FBtr0082961 CG14853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10653 chr3R 13461167 13461371 + 14 NA Intergenic Intergenic 3868 FBgn0051573 FBgn0051573 FBtr0083472 tRNA:CR31573 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10929 chr3R 15386594 15386703 + 14 NA intron (FBgn0260003, intron 25 of 35) protein_coding-intron (FBgn0260003, intron 25 of 34) -25270 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2807 chr2L 17976604 17976727 + 14 NA exon (FBgn0023096, exon 11 of 25) protein_coding-exon (FBgn0023096, exon 11 of 25) 5807 FBgn0023096 FBgn0023096 FBtr0273418 btv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_860 chr2L 6195780 6195965 + 14 NA intron (FBgn0085409, intron 3 of 12) protein_coding-intron (FBgn0085409, intron 3 of 12) 16739 FBgn0085409 FBgn0085409 FBtr0112617 CG34380 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11565 chr3R 22007611 22007776 + 14 NA intron (FBgn0051323, intron 1 of 4) protein_coding-intron (FBgn0051323, intron 1 of 4) -3280 FBgn0051086 FBgn0051086 FBtr0084989 CG31086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3514 chr2L 21884707 21884853 + 14 NA Intergenic Intergenic -9447 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1722 chr2L 12844206 12844386 + 14 NA Intergenic Intergenic -21509 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7956 chr3L 13731749 13731945 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 64653 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8733 chr3L 23446336 23446432 + 14 NA Intergenic Intergenic -102641 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10728 chr3R 13906823 13906923 + 14 NA promoter-TSS (FBgn0038566) protein_coding-promoter-TSS (FBgn0038566) 30 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11029 chr3R 15907029 15907555 + 14 NA exon (FBgn0003249, exon 1 of 1) protein_coding-exon (FBgn0003249, exon 1 of 1) 880 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13833 chrX 20150295 20150358 + 14 NA Intergenic Intergenic -9800 FBgn0027107 FBgn0027107 FBtr0077339 inx6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4533 chr2R 6219600 6219794 + 14 NA exon (FBgn0261698, exon 16 of 29) protein_coding-exon (FBgn0261698, exon 16 of 29) -11692 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1381 chr2L 9809116 9809266 + 14 NA intron (FBgn0032151, intron 7 of 13) protein_coding-intron (FBgn0032151, intron 6 of 13) -16084 FBgn0032150 FBgn0032150 FBtr0331286 CG13123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2218 chr2L 15305413 15305597 + 14 NA Intergenic Intergenic 7697 FBgn0028852 FBgn0028852 FBtr0080733 CG15262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5354 chr2R 13080316 13080382 + 14 NA Intergenic Intergenic -2359 FBgn0034205 FBgn0034205 FBtr0086990 CG10950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5333 chr2R 12716355 12716484 + 14 NA promoter-TSS (FBgn0263659) ncRNA-promoter-TSS (FBgn0263659) -1776 FBgn0263659 FBgn0263659 FBtr0310103 CR43650 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4502 chr2R 5975539 5975685 + 14 NA intron (FBgn0033484, intron 1 of 6) protein_coding-intron (FBgn0033484, intron 1 of 5) -1044 FBgn0028560 FBgn0028560 FBtr0089674 sut4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_77 chr2L 758721 758965 + 14 NA intron (FBgn0031275, intron 8 of 10) protein_coding-intron (FBgn0031275, intron 7 of 9) 8234 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_499 chr2L 3392985 3393148 + 14 NA Intergenic Intergenic -4570 FBgn0259950 FBgn0259950 FBtr0300294 CG42460 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_298 chr2L 1559307 1559433 + 14 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 4240 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3634 chr2L 22161812 22162001 + 14 NA TTS (FBgn0261802) protein_coding-TTS (FBgn0261802) 7237 FBgn0032979 FBgn0032979 FBtr0085964 CG1832 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9241 chr3R 2660535 2660668 + 14 NA intron (FBgn0003339, intron 2 of 2) protein_coding-intron (FBgn0003339, intron 2 of 2) -11844 FBgn0011904 FBgn0011904 FBtr0081660 tRNA:K5:84ABa tRNA Nup98-S2-pascual-garcia2017_R1_peak_11452 chr3R 20982819 20982988 + 14 NA Intergenic Intergenic 19104 FBgn0039283 FBgn0039283 FBtr0084780 danr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7611 chr3L 10749505 10749610 + 14 NA Intergenic Intergenic -15535 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6345 chr2RHet 446570 446678 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8737 chr3L 23471277 23471524 + 14 NA Intergenic Intergenic -77625 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3937 chr2R 706127 706181 + 14 NA exon (FBgn0261387, exon 3 of 6) protein_coding-exon (FBgn0261387, exon 3 of 6) 5659 FBgn0261387 FBgn0261387 FBtr0111277 CG17528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8164 chr3L 15693201 15693270 + 14 NA promoter-TSS (FBgn0041160) protein_coding-promoter-TSS (FBgn0041160) -285 FBgn0041160 FBgn0041160 FBtr0075580 comm2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_790 chr2L 5621786 5621928 + 14 NA exon (FBgn0031726, exon 3 of 3) pseudogene-exon (FBgn0031726, exon 3 of 3) 1903 FBgn0031726 FBgn0031726 FBtr0100853 Cyp6a16Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10823 chr3R 14475215 14475342 + 14 NA TTS (FBgn0051224) protein_coding-TTS (FBgn0051224) -8099 FBgn0038632 FBgn0038632 FBtr0290199 CG14301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2866 chr2L 18261156 18261306 + 14 NA intron (FBgn0261804, intron 2 of 14) protein_coding-intron (FBgn0261804, intron 2 of 14) -3329 FBgn0051788 FBgn0051788 FBtr0081056 CG31788 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1781 chr2L 13281309 13281401 + 14 NA exon (FBgn0032498, exon 1 of 1) protein_coding-exon (FBgn0032498, exon 1 of 1) 3979 FBgn0032498 FBgn0032498 FBtr0080459 CG6108 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12609 chr3R 26840532 26840634 + 14 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) 1986 FBgn0004573 FBgn0004573 FBtr0085746 5-HT7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13604 chrX 8261944 8261998 + 14 NA Intergenic Intergenic -17843 FBgn0030033 FBgn0030033 FBtr0071173 CG1387 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1008 chr2L 7744249 7744539 + 14 NA exon (FBgn0031940, exon 2 of 2) protein_coding-exon (FBgn0031940, exon 2 of 2) 447 FBgn0031940 FBgn0031940 FBtr0079499 CG7214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11947 chr3R 23656135 23656227 + 14 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -14630 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2372 chr2L 15966373 15966498 + 14 NA Intergenic Intergenic -4003 FBgn0028645 FBgn0028645 FBtr0300615 beat-Ib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3474 chr2L 21813123 21813196 + 14 NA Intergenic Intergenic -15434 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13370 chrUextra 15355203 15355315 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1129 chr2L 8621367 8621688 + 14 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 1499 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5116 chr2R 10844888 10844948 + 14 NA intron (FBgn0261854, intron 1 of 9) protein_coding-intron (FBgn0261854, intron 3 of 9) -7666 FBgn0261854 FBgn0261854 FBtr0303437 aPKC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11273 chr3R 17721344 17721512 + 14 NA intron (FBgn0038917, intron 4 of 4) protein_coding-intron (FBgn0038917, intron 4 of 4) 6167 FBgn0264426 FBgn0264426 FBtr0332545 CR43844 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13148 chrU 1187773 1188081 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10891 chr3R 15090873 15090953 + 14 NA Intergenic Intergenic 7925 FBgn0038695 FBgn0038695 FBtr0083738 CG14280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7890 chr3L 13273016 13273291 + 14 NA TTS (FBgn0023095) protein_coding-TTS (FBgn0023095) 277 FBgn0052123 FBgn0052123 FBtr0075835 tRNA:CR32123:Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10315 chr3R 11352307 11352370 + 14 NA Intergenic Intergenic 4857 FBgn0051296 FBgn0051296 FBtr0083155 CG31296 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10807 chr3R 14422130 14422186 + 14 NA intron (FBgn0038629, intron 3 of 7) protein_coding-intron (FBgn0038629, intron 4 of 8) -2320 FBgn0038630 FBgn0038630 FBtr0083636 CG14305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9515 chr3R 4681345 4681399 + 14 NA intron (FBgn0262614, intron 2 of 5) protein_coding-intron (FBgn0262614, intron 1 of 11) -6230 FBgn0011966 FBgn0011966 FBtr0081923 tRNA:R:85Ca tRNA Nup98-S2-pascual-garcia2017_R1_peak_7964 chr3L 13769999 13770101 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 26450 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9461 chr3R 4270312 4270371 + 14 NA exon (FBgn0263416, exon 2 of 16) protein_coding-exon (FBgn0263416, exon 2 of 16) -24022 FBgn0037589 FBgn0037589 FBtr0081849 Obp85a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8336 chr3L 17134901 17135037 + 14 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -24994 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3489 chr2L 21849678 21849859 + 14 NA Intergenic Intergenic 21175 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6243 chr2R 20698748 20698944 + 14 NA Intergenic Intergenic 1975 FBgn0262098 FBgn0262098 FBtr0304016 CG42851 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8515 chr3L 18561456 18561607 + 14 NA intron (FBgn0036790, intron 1 of 3) protein_coding-intron (FBgn0036790, intron 1 of 3) 8173 FBgn0036790 FBgn0036790 FBtr0089578 star1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1156 chr2L 8666531 8666702 + 14 NA exon (FBgn0011259, exon 22 of 22) protein_coding-exon (FBgn0011259, exon 22 of 22) -6536 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2983 chr2L 19214320 19214485 + 14 NA Intergenic Intergenic 24056 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1656 chr2L 12568960 12569174 + 14 NA Intergenic Intergenic 25891 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10271 chr3R 11012188 11012295 + 14 NA exon (FBgn0038295, exon 2 of 11) protein_coding-exon (FBgn0038295, exon 2 of 11) 468 FBgn0038295 FBgn0038295 FBtr0083028 Gyc88E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9104 chr3R 1710502 1710751 + 14 NA exon (FBgn0083949, exon 9 of 17) protein_coding-exon (FBgn0083949, exon 9 of 17) -23607 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11569 chr3R 22016494 22016750 + 14 NA promoter-TSS (FBgn0083966) protein_coding-promoter-TSS (FBgn0083966) 305 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12347 chr3R 25355918 25356039 + 14 NA Intergenic Intergenic -4380 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_597 chr2L 4168287 4168391 + 14 NA Intergenic Intergenic -2205 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4955 chr2R 9488339 9488514 + 14 NA promoter-TSS (FBgn0262360) protein_coding-promoter-TSS (FBgn0262360) 91 FBgn0262360 FBgn0262360 FBtr0304641 CG43058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6568 chr2RHet 1947078 1947337 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6235 chr2R 20590809 20590964 + 14 NA intron (FBgn0053988, intron 3 of 5) protein_coding-intron (FBgn0053988, intron 3 of 5) -8977 FBgn0035050 FBgn0035050 FBtr0072442 ST6Gal protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12756 chr3R 27507494 27507765 + 14 NA Intergenic Intergenic -2027 FBgn0039864 FBgn0039864 FBtr0085867 CG11550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9603 chr3R 5364700 5364973 + 14 NA exon (FBgn0037705, exon 9 of 9) protein_coding-exon (FBgn0037705, exon 9 of 9) -6102 FBgn0000244 FBgn0000244 FBtr0301093 by protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13715 chrX 13327911 13328032 + 14 NA Intergenic Intergenic -11968 FBgn0052635 FBgn0052635 FBtr0073780 Neto protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10640 chr3R 13392894 13393072 + 14 NA exon (FBgn0264005, exon 3 of 3) protein_coding-exon (FBgn0264005, exon 3 of 3) 8331 FBgn0264005 FBgn0264005 FBtr0330386 Hmx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11772 chr3R 22914902 22915084 + 14 NA TTS (FBgn0039481) protein_coding-TTS (FBgn0039481) -1493 FBgn0039480 FBgn0039480 FBtr0085136 Cpr97Ea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10168 chr3R 9999407 9999703 + 14 NA exon (FBgn0011582, exon 6 of 6) protein_coding-exon (FBgn0011582, exon 6 of 6) 11124 FBgn0038210 FBgn0038210 FBtr0082894 CG3199 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_22 chr2L 315987 316189 + 14 NA intron (FBgn0004611, intron 1 of 16) protein_coding-intron (FBgn0004611, intron 1 of 16) 3171 FBgn0031248 FBgn0031248 FBtr0078099 CG11912 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13740 chrX 14260826 14260977 + 14 NA intron (FBgn0052600, intron 3 of 9) protein_coding-intron (FBgn0052600, intron 3 of 9) -11938 FBgn0052601 FBgn0052601 FBtr0073914 betaNACtes3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4657 chr2R 7268258 7268391 + 14 NA TTS (FBgn0033631) protein_coding-TTS (FBgn0033631) -1642 FBgn0033629 FBgn0033629 FBtr0088151 Tsp47F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_964 chr2L 7135416 7135621 + 14 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -1991 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6714 chr3L 396604 396692 + 14 NA Intergenic Intergenic 3054 FBgn0264700 FBgn0264700 FBtr0333900 CR43969 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12680 chr3R 27145434 27145608 + 14 NA intron (FBgn0085376, intron 1 of 7) protein_coding-intron (FBgn0085376, intron 1 of 16) 8625 FBgn0085376 FBgn0085376 FBtr0301051 CG34347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12146 chr3R 24410902 24411399 + 14 NA promoter-TSS (FBgn0000659) protein_coding-promoter-TSS (FBgn0000659) -316 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5414 chr2R 13689377 13689474 + 14 NA promoter-TSS (FBgn0259211) protein_coding-promoter-TSS (FBgn0259211) 9038 FBgn0028743 FBgn0028743 FBtr0301142 CG5036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8906 chr3LHet 1495818 1496034 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10590 chr3R 13022079 13022162 + 14 NA Intergenic Intergenic 23486 FBgn0051262 FBgn0051262 FBtr0302853 CG31262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11983 chr3R 23839819 23839873 + 14 NA Intergenic Intergenic -12488 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7501 chr3L 9560334 9560451 + 14 NA intron (FBgn0261555, intron 2 of 9) protein_coding-intron (FBgn0261555, intron 2 of 9) 20072 FBgn0261555 FBgn0261555 FBtr0302710 CG42673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7316 chr3L 7491074 7491268 + 14 NA exon (FBgn0035791, exon 1 of 2) protein_coding-exon (FBgn0035791, exon 1 of 2) 760 FBgn0035791 FBgn0035791 FBtr0076831 CG8539 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8803 chr3L 23949545 23949629 + 14 NA intron (FBgn0058470, intron 2 of 12) protein_coding-intron (FBgn0058470, intron 2 of 12) 29923 FBgn0058470 FBgn0058470 FBtr0111152 CG40470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9996 chr3R 8755071 8755361 + 14 NA intron (FBgn0038092, intron 3 of 6) protein_coding-intron (FBgn0038092, intron 3 of 6) 13372 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10117 chr3R 9627935 9628176 + 14 NA Intergenic Intergenic -4063 FBgn0051331 FBgn0051331 FBtr0082836 tRNA:CR31331 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2729 chr2L 17701803 17701879 + 14 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -2840 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4978 chr2R 9628919 9629062 + 14 NA intron (FBgn0000633, intron 11 of 12) protein_coding-intron (FBgn0000633, intron 11 of 12) -13859 FBgn0033866 FBgn0033866 FBtr0087628 CG6280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_68 chr2L 751233 751304 + 14 NA intron (FBgn0031275, intron 1 of 10) protein_coding-intron (FBgn0031275, intron 1 of 10) 659 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7527 chr3L 10069153 10069346 + 14 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 13251 FBgn0036066 FBgn0036066 FBtr0076316 CG14160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11105 chr3R 16321565 16321699 + 14 NA Intergenic Intergenic 6016 FBgn0038797 FBgn0038797 FBtr0083892 Dic2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10248 chr3R 10801343 10801520 + 14 NA Intergenic Intergenic -39061 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12629 chr3R 26937717 26937881 + 14 NA Intergenic Intergenic -2889 FBgn0039818 FBgn0039818 FBtr0085739 CG11318 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_131 chr2L 972534 972681 + 14 NA Intergenic Intergenic 49814 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_669 chr2L 4600246 4600348 + 14 NA Intergenic Intergenic -8334 FBgn0053196 FBgn0053196 FBtr0332355 dp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3998 chr2R 1375772 1375863 + 14 NA intron (FBgn0050440, intron 2 of 7) protein_coding-intron (FBgn0050440, intron 2 of 7) 7524 FBgn0050440 FBgn0050440 FBtr0086076 CG30440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7411 chr3L 8468886 8469288 + 14 NA exon (FBgn0262719, exon 5 of 7) protein_coding-exon (FBgn0262719, exon 5 of 7) 26065 FBgn0010825 FBgn0010825 FBtr0076618 Gug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5865 chr2R 17456319 17456508 + 14 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 7127 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10764 chr3R 14177092 14177219 + 14 NA intron (FBgn0038606, intron 3 of 3) protein_coding-intron (FBgn0038606, intron 3 of 3) 9544 FBgn0038606 FBgn0038606 FBtr0302308 CG15803 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1892 chr2L 14144063 14144383 + 14 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 9732 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4189 chr2R 3724145 3724250 + 14 NA TTS (FBgn0040780) protein_coding-TTS (FBgn0040780) 4326 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10990 chr3R 15696051 15696177 + 14 NA exon (FBgn0038740, exon 7 of 9) protein_coding-exon (FBgn0038740, exon 7 of 9) 4827 FBgn0038740 FBgn0038740 FBtr0113250 CG4562 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5499 chr2R 14368490 14368633 + 14 NA intron (FBgn0028496, intron 2 of 18) protein_coding-intron (FBgn0028496, intron 2 of 18) 16935 FBgn0028496 FBgn0028496 FBtr0086720 CG30116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_545 chr2L 3734207 3734341 + 14 NA intron (FBgn0031568, intron 1 of 12) protein_coding-intron (FBgn0031568, intron 1 of 12) 3808 FBgn0031568 FBgn0031568 FBtr0273188 CG10019 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8747 chr3L 23562036 23562186 + 14 NA exon (FBgn0250816, exon 3 of 8) protein_coding-exon (FBgn0250816, exon 3 of 8) 13086 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4812 chr2R 8267678 8267744 + 14 NA TTS (FBgn0050042) protein_coding-TTS (FBgn0050042) 220 FBgn0033723 FBgn0033723 FBtr0087956 CG13155 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8780 chr3L 23782086 23782222 + 14 NA Intergenic Intergenic 4823 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11027 chr3R 15905087 15905243 + 14 NA Intergenic Intergenic 3007 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1534 chr2L 11398125 11398374 + 14 NA Intergenic Intergenic -5951 FBgn0263764 FBgn0263764 FBtr0333747 CG43681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1002 chr2L 7523511 7523709 + 14 NA intron (FBgn0085403, intron 2 of 4) protein_coding-intron (FBgn0085403, intron 3 of 5) -8350 FBgn0085403 FBgn0085403 FBtr0112606 Rapgap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4998 chr2R 9732277 9732534 + 14 NA intron (FBgn0033876, intron 1 of 4) protein_coding-intron (FBgn0033876, intron 1 of 4) 1352 FBgn0033876 FBgn0033876 FBtr0087645 synaptogyrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_684 chr2L 4696188 4696242 + 14 NA intron (FBgn0085380, intron 1 of 5) protein_coding-intron (FBgn0085380, intron 1 of 5) 1494 FBgn0085380 FBgn0085380 FBtr0329978 CG34351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1823 chr2L 13669149 13669285 + 14 NA exon (FBgn0028527, exon 4 of 5) protein_coding-exon (FBgn0028527, exon 4 of 5) 3692 FBgn0028527 FBgn0028527 FBtr0080527 CG18507 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6924 chr3L 2352320 2352582 + 14 NA Intergenic Intergenic -8106 FBgn0035332 FBgn0035332 FBtr0072888 CG13801 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12869 chr3RHet 1564885 1565023 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10347 chr3R 11549083 11549372 + 14 NA Intergenic Intergenic -6920 FBgn0051294 FBgn0051294 FBtr0083198 CG31294 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5069 chr2R 10482194 10482248 + 14 NA TTS (FBgn0019938) protein_coding-TTS (FBgn0019938) 3513 FBgn0033943 FBgn0033943 FBtr0087496 CG12869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5909 chr2R 17793425 17793572 + 14 NA intron (FBgn0085397, intron 2 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 22681 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10569 chr3R 12787287 12787388 + 14 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -13589 FBgn0038458 FBgn0038458 FBtr0083366 VhaM9.7-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7396 chr3L 8362769 8362843 + 14 NA Intergenic Intergenic -2699 FBgn0001253 FBgn0001253 FBtr0076607 ImpE1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7211 chr3L 6647714 6647837 + 14 NA Intergenic Intergenic 10966 FBgn0035709 FBgn0035709 FBtr0076963 eIF4E-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9767 chr3R 6864698 6864894 + 14 NA intron (FBgn0083950, intron 11 of 13) protein_coding-intron (FBgn0083950, intron 11 of 15) 45591 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13621 chrX 8825373 8825467 + 14 NA intron (FBgn0261549, intron 1 of 15) protein_coding-intron (FBgn0261549, intron 1 of 15) 6203 FBgn0261549 FBgn0261549 FBtr0302662 rdgA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9240 chr3R 2658366 2658443 + 14 NA intron (FBgn0003339, intron 2 of 2) protein_coding-intron (FBgn0003339, intron 2 of 2) -9647 FBgn0011904 FBgn0011904 FBtr0081660 tRNA:K5:84ABa tRNA Nup98-S2-pascual-garcia2017_R1_peak_2003 chr2L 14499700 14499883 + 14 NA Intergenic Intergenic 3913 FBgn0028882 FBgn0028882 FBtr0080644 tRNA:P:35Bd tRNA Nup98-S2-pascual-garcia2017_R1_peak_13289 chrUextra 159693 159808 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6627 chr2RHet 2244913 2245202 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5676 chr2R 15909320 15909441 + 14 NA Intergenic Intergenic -16888 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11651 chr3R 22348732 22348896 + 14 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 12125 FBgn0039431 FBgn0039431 FBtr0302210 CG6490 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12801 chr3R 27758095 27758238 + 14 NA exon (FBgn0011224, exon 6 of 16) protein_coding-exon (FBgn0011224, exon 6 of 16) 48725 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11385 chr3R 19543191 19543370 + 14 NA exon (FBgn0002922, exon 1 of 5) protein_coding-exon (FBgn0002922, exon 1 of 5) 799 FBgn0002922 FBgn0002922 FBtr0301445 nau protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5128 chr2R 10923249 10923367 + 14 NA intron (FBgn0029082, intron 1 of 11) protein_coding-intron (FBgn0029082, intron 1 of 11) -10964 FBgn0043530 FBgn0043530 FBtr0087420 Obp51a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9846 chr3R 7546738 7546906 + 14 NA promoter-TSS (FBgn0037941) protein_coding-promoter-TSS (FBgn0037941) -704 FBgn0037941 FBgn0037941 FBtr0082429 CG12594 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3547 chr2L 21974183 21974338 + 14 NA Intergenic Intergenic 18673 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12192 chr3R 24580651 24580741 + 14 NA TTS (FBgn0039597) protein_coding-TTS (FBgn0039597) 2005 FBgn0039597 FBgn0039597 FBtr0085314 CG9997 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6543 chr2RHet 1912484 1912559 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13471 chrX 1698922 1698976 + 14 NA intron (FBgn0261548, intron 2 of 3) protein_coding-intron (FBgn0261548, intron 2 of 3) 15350 FBgn0052806 FBgn0052806 FBtr0070301 CG32806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1878 chr2L 14056711 14056861 + 14 NA intron (FBgn0028875, intron 2 of 13) protein_coding-intron (FBgn0028875, intron 2 of 13) 9204 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13842 chrX 21202945 21203090 + 14 NA TTS (FBgn0015558) protein_coding-TTS (FBgn0015558) 7030 FBgn0015558 FBgn0015558 FBtr0329900 tty protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7041 chr3L 4404878 4404948 + 14 NA TTS (FBgn0035541) protein_coding-TTS (FBgn0035541) 1146 FBgn0035541 FBgn0035541 FBtr0073335 CG15019 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4858 chr2R 8718306 8718422 + 14 NA Intergenic Intergenic 11699 FBgn0033775 FBgn0033775 FBtr0087820 Cyp9h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9265 chr3R 2790817 2790970 + 14 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 2 of 6) -32331 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8952 chr3R 320788 321146 + 14 NA exon (FBgn0085386, exon 12 of 14) protein_coding-exon (FBgn0085386, exon 12 of 14) 10204 FBgn0037255 FBgn0037255 FBtr0078928 Fip1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3980 chr2R 992130 992331 + 14 NA Intergenic Intergenic 12855 FBgn0033005 FBgn0033005 FBtr0111280 CG3107 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9472 chr3R 4325389 4325506 + 14 NA Intergenic Intergenic 11633 FBgn0037590 FBgn0037590 FBtr0081900 Or85b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12502 chr3R 25981708 25981850 + 14 NA exon (FBgn0039749, exon 2 of 6) protein_coding-exon (FBgn0039749, exon 2 of 6) 3998 FBgn0039748 FBgn0039748 FBtr0085567 CG15529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2607 chr2L 17104319 17104421 + 14 NA Intergenic Intergenic 16729 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_281 chr2L 1489509 1489646 + 14 NA Intergenic Intergenic -2718 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6245 chr2R 20723084 20723237 + 14 NA TTS (FBgn0000157) protein_coding-TTS (FBgn0000157) -13339 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11884 chr3R 23416640 23416714 + 14 NA exon (FBgn0039527, exon 2 of 5) protein_coding-exon (FBgn0039527, exon 2 of 5) 2583 FBgn0039527 FBgn0039527 FBtr0085202 CG5639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4373 chr2R 4943301 4943386 + 14 NA intron (FBgn0033368, intron 2 of 9) protein_coding-intron (FBgn0033368, intron 3 of 10) 4067 FBgn0033368 FBgn0033368 FBtr0308823 CG13743 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11378 chr3R 19379601 19379728 + 14 NA TTS (FBgn0039088) protein_coding-TTS (FBgn0039088) 2831 FBgn0039088 FBgn0039088 FBtr0084417 CG10164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10910 chr3R 15238110 15238282 + 14 NA promoter-TSS (FBgn0051221) protein_coding-promoter-TSS (FBgn0051221) -220 FBgn0051221 FBgn0051221 FBtr0330030 CG31221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12473 chr3R 25742759 25742965 + 14 NA exon (FBgn0003861, exon 9 of 14) protein_coding-exon (FBgn0003861, exon 9 of 14) -2794 FBgn0039722 FBgn0039722 FBtr0085514 capa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11228 chr3R 17470208 17470402 + 14 NA intron (FBgn0011766, intron 2 of 7) protein_coding-intron (FBgn0011766, intron 2 of 7) -11561 FBgn0011766 FBgn0011766 FBtr0084119 E2f protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5271 chr2R 12258361 12258415 + 14 NA Intergenic Intergenic -6576 FBgn0034122 FBgn0034122 FBtr0087167 CG15711 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1988 chr2L 14445861 14446381 + 14 NA Intergenic Intergenic 4801 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5845 chr2R 17433981 17434177 + 14 NA promoter-TSS (FBgn0003731) protein_coding-promoter-TSS (FBgn0003731) -995 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6775 chr3L 943009 943158 + 14 NA intron (FBgn0264574, intron 2 of 14) protein_coding-intron (FBgn0264574, intron 2 of 12) -16577 FBgn0264574 FBgn0264574 FBtr0333507 Glut1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3917 chr2R 388742 388918 + 14 NA Intergenic Intergenic -8673 FBgn0050260 FBgn0050260 FBtr0100840 tRNA:CR30260 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11001 chr3R 15753809 15753980 + 14 NA exon (FBgn0038753, exon 1 of 4) protein_coding-exon (FBgn0038753, exon 1 of 4) 472 FBgn0038753 FBgn0038753 FBtr0083849 CG4459 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10557 chr3R 12749604 12749727 + 14 NA promoter-TSS (FBgn0263610) ncRNA-promoter-TSS (FBgn0263610) -710 FBgn0263610 FBgn0263610 FBtr0306339 msa ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11957 chr3R 23681424 23681578 + 14 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) 9829 FBgn0039551 FBgn0039551 FBtr0085226 Or98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12252 chr3R 24840459 24840853 + 14 NA intron (FBgn0039620, intron 1 of 9) protein_coding-intron (FBgn0039620, intron 1 of 9) 5472 FBgn0039620 FBgn0039620 FBtr0085345 CG1443 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3302 chr2L 20840467 20840642 + 14 NA promoter-TSS (FBgn0051676) protein_coding-promoter-TSS (FBgn0051676) -246 FBgn0051676 FBgn0051676 FBtr0081424 CG31676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4881 chr2R 8886173 8886244 + 14 NA intron (FBgn0008654, intron 1 of 5) protein_coding-intron (FBgn0008654, intron 1 of 5) 2202 FBgn0008654 FBgn0008654 FBtr0087793 Su(z)2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6806 chr3L 1202198 1202277 + 14 NA exon (FBgn0063667, exon 2 of 2) protein_coding-exon (FBgn0063667, exon 2 of 2) 793 FBgn0063667 FBgn0063667 FBtr0273416 CG32335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7239 chr3L 6892055 6892136 + 14 NA Intergenic Intergenic 14969 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1835 chr2L 13744054 13744136 + 14 NA Intergenic Intergenic 3588 FBgn0262272 FBgn0262272 FBtr0304386 mir-1002 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1136 chr2L 8634712 8634834 + 14 NA intron (FBgn0011259, intron 4 of 20) protein_coding-intron (FBgn0011259, intron 4 of 21) 14745 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8993 chr3R 747538 747638 + 14 NA intron (FBgn0051536, intron 2 of 12) protein_coding-intron (FBgn0051536, intron 2 of 6) -5055 FBgn0085335 FBgn0085335 FBtr0112502 CG34306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12174 chr3R 24544535 24544712 + 14 NA exon (FBgn0027655, exon 16 of 29) protein_coding-exon (FBgn0027655, exon 16 of 29) 22659 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10229 chr3R 10652507 10652704 + 14 NA exon (FBgn0053555, exon 3 of 12) protein_coding-exon (FBgn0053555, exon 3 of 12) -18160 FBgn0038266 FBgn0038266 FBtr0082994 CG3610 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2427 chr2L 16150763 16150856 + 14 NA Intergenic Intergenic -15022 FBgn0001991 FBgn0001991 FBtr0332020 Ca-alpha1D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7193 chr3L 6429081 6429263 + 14 NA intron (FBgn0261801, intron 1 of 6) protein_coding-intron (FBgn0261801, intron 1 of 6) 35480 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9972 chr3R 8604479 8604601 + 14 NA promoter-TSS (FBgn0038084) protein_coding-promoter-TSS (FBgn0038084) -666 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10965 chr3R 15556781 15557096 + 14 NA exon (FBgn0024963, exon 1 of 12) protein_coding-exon (FBgn0024963, exon 1 of 12) 257 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2908 chr2L 18586891 18586945 + 14 NA Intergenic Intergenic -3979 FBgn0032688 FBgn0032688 FBtr0081070 CG15160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8705 chr3L 22599419 22599611 + 14 NA promoter-TSS (FBgn0037172) protein_coding-promoter-TSS (FBgn0037172) 46 FBgn0037172 FBgn0037172 FBtr0078515 CG6914 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2967 chr2L 19105887 19106043 + 14 NA exon (FBgn0002023, exon 2 of 8) protein_coding-exon (FBgn0002023, exon 2 of 8) 1820 FBgn0002023 FBgn0002023 FBtr0309834 Lim3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9348 chr3R 3287672 3287822 + 14 NA Intergenic Intergenic 9965 FBgn0011998 FBgn0011998 FBtr0081536 tRNA:V3b:84Da tRNA Nup98-S2-pascual-garcia2017_R1_peak_1086 chr2L 8502095 8502712 + 14 NA intron (FBgn0032048, intron 2 of 3) protein_coding-intron (FBgn0032048, intron 2 of 4) 4442 FBgn0032048 FBgn0032048 FBtr0300450 Dh31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3076 chr2L 19696771 19696841 + 14 NA intron (FBgn0000464, intron 7 of 18) protein_coding-intron (FBgn0000464, intron 4 of 16) 4162 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7076 chr3L 5016121 5016175 + 14 NA intron (FBgn0005775, intron 3 of 7) protein_coding-intron (FBgn0005775, intron 3 of 7) -4015 FBgn0035585 FBgn0035585 FBtr0073372 CG12027 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_584 chr2L 4105251 4105405 + 14 NA intron (FBgn0000547, intron 7 of 8) protein_coding-intron (FBgn0000547, intron 7 of 8) -15035 FBgn0020376 FBgn0020376 FBtr0077466 Sr-CIII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10240 chr3R 10744594 10744859 + 14 NA exon (FBgn0038279, exon 1 of 7) protein_coding-exon (FBgn0038279, exon 1 of 7) 324 FBgn0038279 FBgn0038279 FBtr0083004 CG3837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2588 chr2L 17047349 17047527 + 14 NA exon (FBgn0032625, exon 2 of 2) protein_coding-exon (FBgn0032625, exon 2 of 2) 843 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8899 chr3LHet 1349666 1349809 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3396 chr2L 21377005 21377059 + 14 NA exon (FBgn0032945, exon 3 of 3) protein_coding-exon (FBgn0032945, exon 3 of 3) -2968 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11813 chr3R 23157980 23158193 + 14 NA Intergenic Intergenic -1482 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_397 chr2L 2481954 2482070 + 14 NA Intergenic Intergenic 8107 FBgn0031429 FBgn0031429 FBtr0077784 CG15393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3168 chr2L 20226741 20226826 + 14 NA Intergenic Intergenic -21440 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8433 chr3L 17704223 17704394 + 14 NA intron (FBgn0052183, intron 2 of 9) protein_coding-intron (FBgn0052183, intron 2 of 9) 8646 FBgn0261294 FBgn0261294 FBtr0091928 CheB74a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_882 chr2L 6406577 6406750 + 14 NA intron (FBgn0259714, intron 2 of 9) protein_coding-intron (FBgn0259714, intron 2 of 9) 4643 FBgn0259714 FBgn0259714 FBtr0299967 CG42368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12214 chr3R 24614053 24614188 + 14 NA Intergenic Intergenic -1219 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8496 chr3L 18233600 18233871 + 14 NA Intergenic Intergenic -11453 FBgn0036783 FBgn0036783 FBtr0075129 CheA75a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1327 chr2L 9301752 9301893 + 14 NA Intergenic Intergenic 3185 FBgn0262033 FBgn0262033 FBtr0303929 CG42844 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7847 chr3L 12947193 12947405 + 14 NA exon (FBgn0036325, exon 1 of 2) protein_coding-exon (FBgn0036325, exon 1 of 2) 448 FBgn0036325 FBgn0036325 FBtr0075903 CG10752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11542 chr3R 21900779 21901035 + 14 NA Intergenic Intergenic -12174 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3232 chr2L 20523557 20523616 + 14 NA Intergenic Intergenic 28480 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4764 chr2R 7853002 7853107 + 14 NA exon (FBgn0033668, exon 9 of 9) protein_coding-exon (FBgn0033668, exon 9 of 9) 3299 FBgn0033669 FBgn0033669 FBtr0088053 PI31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8184 chr3L 15906441 15906666 + 14 NA intron (FBgn0036544, intron 1 of 15) protein_coding-intron (FBgn0036544, intron 1 of 15) 11408 FBgn0036544 FBgn0036544 FBtr0334071 sff protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12565 chr3R 26689347 26689401 + 14 NA Intergenic Intergenic -3871 FBgn0039805 FBgn0039805 FBtr0085710 Cpr100A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1785 chr2L 13317199 13317355 + 14 NA intron (FBgn0264308, intron 1 of 5) protein_coding-intron (FBgn0264308, intron 1 of 5) -10522 FBgn0264301 FBgn0264301 FBtr0331506 CG43779 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2653 chr2L 17281505 17281659 + 14 NA Intergenic Intergenic -4712 FBgn0032631 FBgn0032631 FBtr0302408 CG15140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9137 chr3R 2032777 2032880 + 14 NA exon (FBgn0037409, exon 6 of 6) protein_coding-exon (FBgn0037409, exon 6 of 6) -2267 FBgn0037410 FBgn0037410 FBtr0078593 Osi2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7982 chr3L 13897472 13897630 + 14 NA Intergenic Intergenic -1215 FBgn0264006 FBgn0264006 FBtr0330416 dysc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4055 chr2R 2440626 2440838 + 14 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) -19632 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4368 chr2R 4921006 4921080 + 14 NA Intergenic Intergenic -2497 FBgn0033365 FBgn0033365 FBtr0110892 CG8170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9828 chr3R 7330123 7330269 + 14 NA exon (FBgn0037908, exon 4 of 6) protein_coding-exon (FBgn0037908, exon 4 of 6) 3404 FBgn0037908 FBgn0037908 FBtr0082395 dpr5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13832 chrX 19986111 19986236 + 14 NA exon (FBgn0031086, exon 1 of 1) protein_coding-exon (FBgn0031086, exon 1 of 1) 245 FBgn0031086 FBgn0031086 FBtr0070032 fd19B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6460 chr2RHet 1308254 1308384 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4612 chr2R 6857791 6857943 + 14 NA Intergenic Intergenic -28661 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12239 chr3R 24784608 24784819 + 14 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 11363 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4675 chr2R 7393601 7393725 + 14 NA exon (FBgn0001269, exon 4 of 6) protein_coding-exon (FBgn0001269, exon 4 of 6) 21725 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1905 chr2L 14269670 14269844 + 14 NA intron (FBgn0261563, intron 1 of 12) protein_coding-intron (FBgn0261563, intron 1 of 15) -5038 FBgn0052971 FBgn0052971 FBtr0080621 CG32971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11075 chr3R 16173237 16173453 + 14 NA Intergenic Intergenic 8356 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_106 chr2L 907766 907954 + 14 NA Intergenic Intergenic -6206 FBgn0003916 FBgn0003916 FBtr0078028 snRNA:U1:21D snRNA Nup98-S2-pascual-garcia2017_R1_peak_5292 chr2R 12390417 12390504 + 14 NA intron (FBgn0011260, intron 1 of 14) protein_coding-intron (FBgn0011260, intron 1 of 14) -3526 FBgn0034133 FBgn0034133 FBtr0087126 CG7813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13046 chrU 41696 41830 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5531 chr2R 14671950 14672104 + 14 NA intron (FBgn0034391, intron 1 of 5) protein_coding-intron (FBgn0034391, intron 1 of 5) 1221 FBgn0034391 FBgn0034391 FBtr0086613 CG15080 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4285 chr2R 4426257 4426366 + 14 NA Intergenic Intergenic -6512 FBgn0050361 FBgn0050361 FBtr0088756 mtt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8451 chr3L 17934441 17934507 + 14 NA intron (FBgn0262793, intron 1 of 1) protein_coding-intron (FBgn0262793, intron 1 of 1) 7342 FBgn0262793 FBgn0262793 FBtr0305909 CG43174 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1108 chr2L 8584928 8585060 + 14 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 9495 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7761 chr3L 12320360 12320550 + 14 NA Intergenic Intergenic -1877 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1191 chr2L 8785235 8785422 + 14 NA Intergenic Intergenic -2834 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1955 chr2L 14383692 14383746 + 14 NA Intergenic Intergenic -2549 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_325 chr2L 1639004 1639102 + 14 NA Intergenic Intergenic -12205 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9294 chr3R 2990244 2990491 + 14 NA exon (FBgn0002306, exon 2 of 10) protein_coding-exon (FBgn0002306, exon 2 of 10) 1816 FBgn0002306 FBgn0002306 FBtr0081571 sas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3175 chr2L 20246648 20246760 + 14 NA Intergenic Intergenic -1519 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12854 chr3RHet 923977 924031 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4049 chr2R 2139082 2139143 + 14 NA exon (FBgn0033075, exon 4 of 9) protein_coding-exon (FBgn0033075, exon 4 of 9) 6071 FBgn0033075 FBgn0033075 FBtr0114492 Pld protein_coding Nup98-S2-pascual-garcia2017_R1_peak_929 chr2L 6834617 6834745 + 14 NA intron (FBgn0051632, intron 4 of 4) protein_coding-intron (FBgn0051632, intron 4 of 4) 12364 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12699 chr3R 27192759 27192915 + 14 NA exon (FBgn0085376, exon 16 of 17) protein_coding-exon (FBgn0085376, exon 16 of 17) -5312 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11191 chr3R 17167606 17167692 + 14 NA exon (FBgn0038881, exon 2 of 15) protein_coding-exon (FBgn0038881, exon 2 of 15) 7657 FBgn0038881 FBgn0038881 FBtr0084095 CG16791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5655 chr2R 15793025 15793126 + 14 NA Intergenic Intergenic -24650 FBgn0034477 FBgn0034477 FBtr0086341 CG13872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7356 chr3L 7949853 7949932 + 14 NA Intergenic Intergenic 8606 FBgn0041156 FBgn0041156 FBtr0076751 exex protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9123 chr3R 1892352 1892432 + 14 NA Intergenic Intergenic -9133 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10442 chr3R 12047488 12047552 + 14 NA Intergenic Intergenic -16547 FBgn0010438 FBgn0010438 FBtr0083277 mtSSB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7049 chr3L 4471949 4472008 + 14 NA TTS (FBgn0052249) protein_coding-TTS (FBgn0052249) 229 FBgn0052248 FBgn0052248 FBtr0303004 CG32248 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1348 chr2L 9526841 9527077 + 14 NA intron (FBgn0032123, intron 2 of 7) protein_coding-intron (FBgn0032123, intron 2 of 8) -1556 FBgn0032122 FBgn0032122 FBtr0079829 CG31883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3181 chr2L 20284981 20285065 + 14 NA Intergenic Intergenic -9684 FBgn0040996 FBgn0040996 FBtr0081351 CG12617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13729 chrX 13764593 13764779 + 14 NA exon (FBgn0263115, exon 6 of 8) protein_coding-exon (FBgn0263115, exon 6 of 8) -13529 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10686 chr3R 13679944 13679998 + 14 NA intron (FBgn0261649, intron 5 of 9) protein_coding-intron (FBgn0261649, intron 5 of 9) 42705 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6831 chr3L 1430040 1430094 + 14 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 3 of 7) -6596 FBgn0035218 FBgn0035218 FBtr0072720 CG9173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1646 chr2L 12388410 12388513 + 14 NA intron (FBgn0262475, intron 6 of 9) protein_coding-intron (FBgn0262475, intron 6 of 9) -9813 FBgn0041195 FBgn0041195 FBtr0080365 Pkd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6057 chr2R 19040570 19040737 + 14 NA promoter-TSS (FBgn0034829) protein_coding-promoter-TSS (FBgn0034829) 438 FBgn0262843 FBgn0262843 FBtr0306079 CG43207 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13689 chrX 12834232 12834325 + 14 NA intron (FBgn0086675, intron 1 of 5) protein_coding-intron (FBgn0086675, intron 1 of 5) 1728 FBgn0086675 FBgn0086675 FBtr0333319 fne protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1921 chr2L 14302177 14302441 + 14 NA intron (FBgn0261563, intron 1 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -6915 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7420 chr3L 8603317 8603380 + 14 NA exon (FBgn0035914, exon 2 of 6) protein_coding-exon (FBgn0035914, exon 2 of 6) 5591 FBgn0035914 FBgn0035914 FBtr0330165 CG6282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9933 chr3R 8340850 8340958 + 14 NA exon (FBgn0250910, exon 8 of 10) protein_coding-exon (FBgn0250910, exon 8 of 10) 6106 FBgn0013279 FBgn0013279 FBtr0082638 Hsp70Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6037 chr2R 18929804 18930025 + 14 NA exon (FBgn0261705, exon 1 of 5) protein_coding-exon (FBgn0261705, exon 1 of 5) 548 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3702 chr2L 22350412 22350688 + 14 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) -3805 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1206 chr2L 8804154 8804473 + 14 NA Intergenic Intergenic -5087 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12533 chr3R 26372331 26372554 + 14 NA promoter-TSS (FBgn0082582) protein_coding-promoter-TSS (FBgn0082582) 314 FBgn0082582 FBgn0082582 FBtr0085663 tmod protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8608 chr3L 20588749 20588839 + 14 NA Intergenic Intergenic 24965 FBgn0001323 FBgn0001323 FBtr0078212 knrl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11107 chr3R 16325166 16325263 + 14 NA TTS (FBgn0038797) protein_coding-TTS (FBgn0038797) 2434 FBgn0038797 FBgn0038797 FBtr0083892 Dic2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_675 chr2L 4651648 4651802 + 14 NA intron (FBgn0031619, intron 1 of 1) protein_coding-intron (FBgn0031619, intron 1 of 2) 322 FBgn0031619 FBgn0031619 FBtr0077376 CG3355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5103 chr2R 10698223 10698380 + 14 NA TTS (FBgn0033968) protein_coding-TTS (FBgn0033968) 2376 FBgn0033968 FBgn0033968 FBtr0087445 CG10200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13197 chrU 1978245 1978299 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10252 chr3R 10827291 10827391 + 14 NA Intergenic Intergenic -13151 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_218 chr2L 1355004 1355259 + 14 NA promoter-TSS (FBgn0051924) protein_coding-promoter-TSS (FBgn0051924) -212 FBgn0051924 FBgn0051924 FBtr0077946 CG31924 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9335 chr3R 3183744 3183856 + 14 NA Intergenic Intergenic 4045 FBgn0037500 FBgn0037500 FBtr0081590 CG17944 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5978 chr2R 18404016 18404185 + 14 NA intron (FBgn0003175, intron 12 of 14) protein_coding-intron (FBgn0003175, intron 12 of 13) 24398 FBgn0034735 FBgn0034735 FBtr0071834 CG4610 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7963 chr3L 13765185 13765239 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 31288 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2616 chr2L 17138213 17138365 + 14 NA intron (FBgn0032627, intron 1 of 5) protein_coding-intron (FBgn0032627, intron 1 of 5) 4671 FBgn0032627 FBgn0032627 FBtr0303301 beat-IIIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13291 chrUextra 172644 172914 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9249 chr3R 2691635 2691777 + 14 NA exon (FBgn0001077, exon 2 of 2) protein_coding-exon (FBgn0001077, exon 2 of 2) 1660 FBgn0001077 FBgn0001077 FBtr0081625 ftz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8430 chr3L 17689517 17689679 + 14 NA intron (FBgn0052183, intron 1 of 9) protein_coding-intron (FBgn0052183, intron 1 of 9) 6483 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3984 chr2R 1063336 1063471 + 14 NA Intergenic Intergenic 31165 FBgn0033010 FBgn0033010 FBtr0086080 Atf6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7204 chr3L 6529509 6529797 + 14 NA intron (FBgn0020251, intron 3 of 5) protein_coding-intron (FBgn0020251, intron 4 of 6) 5824 FBgn0052396 FBgn0052396 FBtr0076969 CG32396 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12441 chr3R 25583187 25583270 + 14 NA Intergenic Intergenic 8287 FBgn0260990 FBgn0260990 FBtr0085477 yata protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1433 chr2L 10543286 10543412 + 14 NA Intergenic Intergenic -1532 FBgn0051721 FBgn0051721 FBtr0304114 Trim9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5237 chr2R 11923615 11923738 + 14 NA intron (FBgn0034070, intron 1 of 14) protein_coding-intron (FBgn0034070, intron 1 of 14) 4211 FBgn0034070 FBgn0034070 FBtr0087209 SP2353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8611 chr3L 20633176 20633230 + 14 NA exon (FBgn0037014, exon 3 of 3) protein_coding-exon (FBgn0037014, exon 3 of 3) 2904 FBgn0037014 FBgn0037014 FBtr0078243 CG13251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2622 chr2L 17189919 17190360 + 14 NA exon (FBgn0032629, exon 6 of 6) protein_coding-exon (FBgn0032629, exon 6 of 6) 8201 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1720 chr2L 12816037 12816234 + 14 NA TTS (FBgn0015399) protein_coding-TTS (FBgn0015399) 6652 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8677 chr3L 22125760 22125912 + 14 NA Intergenic Intergenic -3354 FBgn0037153 FBgn0037153 FBtr0301492 olf413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8263 chr3L 16464471 16464557 + 14 NA exon (FBgn0004569, exon 4 of 4) protein_coding-exon (FBgn0004569, exon 4 of 4) 12236 FBgn0004569 FBgn0004569 FBtr0075408 aos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7712 chr3L 11926732 11926878 + 14 NA intron (FBgn0011723, intron 4 of 6) protein_coding-intron (FBgn0011723, intron 4 of 6) 5167 FBgn0036223 FBgn0036223 FBtr0332072 CG14126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3018 chr2L 19325697 19325838 + 14 NA Intergenic Intergenic 25461 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9688 chr3R 6304745 6304863 + 14 NA Intergenic Intergenic 33974 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6387 chr2RHet 615242 615389 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12747 chr3R 27474370 27474545 + 14 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) -20730 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12104 chr3R 24271538 24271713 + 14 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) 27695 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5643 chr2R 15680134 15680305 + 14 NA Intergenic Intergenic -8694 FBgn0034474 FBgn0034474 FBtr0086343 Obp56g protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10587 chr3R 13013477 13013607 + 14 NA Intergenic Intergenic -27872 FBgn0038492 FBgn0038492 FBtr0083413 Mur89F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2606 chr2L 17103403 17103561 + 14 NA Intergenic Intergenic 15841 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2551 chr2L 16944362 16944525 + 14 NA TTS (FBgn0262355) protein_coding-TTS (FBgn0262355) 931 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1832 chr2L 13737381 13737580 + 14 NA TTS (FBgn0051813) protein_coding-TTS (FBgn0051813) 1340 FBgn0051813 FBgn0051813 FBtr0080531 CG31813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13469 chrX 1662231 1662289 + 14 NA Intergenic Intergenic -5492 FBgn0026086 FBgn0026086 FBtr0309961 Adar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7530 chr3L 10083746 10083909 + 14 NA exon (FBgn0052053, exon 3 of 3) protein_coding-exon (FBgn0052053, exon 3 of 3) -1327 FBgn0036066 FBgn0036066 FBtr0076316 CG14160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9317 chr3R 3117451 3117737 + 14 NA exon (FBgn0259172, exon 6 of 8) protein_coding-exon (FBgn0259172, exon 6 of 8) 5910 FBgn0045843 FBgn0045843 FBtr0081581 RacGAP84C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1948 chr2L 14369009 14369102 + 14 NA Intergenic Intergenic 6986 FBgn0015546 FBgn0015546 FBtr0080630 spel1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12040 chr3R 24038424 24038610 + 14 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 50827 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2785 chr2L 17926102 17926269 + 14 NA Intergenic Intergenic -7054 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_594 chr2L 4159761 4159823 + 14 NA Intergenic Intergenic 6342 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1378 chr2L 9769818 9770178 + 14 NA TTS (FBgn0032145) protein_coding-TTS (FBgn0032145) 931 FBgn0032144 FBgn0032144 FBtr0079868 CG17633 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3809 chr2L 22703485 22703597 + 14 NA Intergenic Intergenic -12533 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10076 chr3R 9323504 9323558 + 14 NA Intergenic Intergenic 25726 FBgn0038157 FBgn0038157 FBtr0082791 CG12538 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5193 chr2R 11491046 11491329 + 14 NA Intergenic Intergenic -10420 FBgn0260429 FBgn0260429 FBtr0304712 CG42524 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9587 chr3R 5151139 5151227 + 14 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) 3044 FBgn0037676 FBgn0037676 FBtr0301210 CG8861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2331 chr2L 15786124 15786285 + 14 NA exon (FBgn0028901, exon 2 of 2) protein_coding-exon (FBgn0028901, exon 2 of 2) 2096 FBgn0028901 FBgn0028901 FBtr0080786 CG18109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10741 chr3R 13985475 13985546 + 14 NA TTS (FBgn0038568) protein_coding-TTS (FBgn0038568) 1087 FBgn0038568 FBgn0038568 FBtr0083547 CG14315 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12223 chr3R 24695011 24695125 + 14 NA exon (FBgn0264324, exon 13 of 13) protein_coding-exon (FBgn0264324, exon 13 of 13) -3559 FBgn0039609 FBgn0039609 FBtr0085328 CG14529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6717 chr3L 431647 431711 + 14 NA Intergenic Intergenic 2227 FBgn0035139 FBgn0035139 FBtr0072566 CG13891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5448 chr2R 13918993 13919118 + 14 NA Intergenic Intergenic 11301 FBgn0034289 FBgn0034289 FBtr0089630 CG10910 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3932 chr2R 640010 640064 + 14 NA intron (FBgn0039994, intron 3 of 8) protein_coding-intron (FBgn0039994, intron 3 of 8) 8132 FBgn0039994 FBgn0039994 FBtr0111290 CG17082 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9881 chr3R 7887228 7887301 + 14 NA exon (FBgn0037988, exon 4 of 5) protein_coding-exon (FBgn0037988, exon 4 of 5) 1402 FBgn0037988 FBgn0037988 FBtr0082552 CG14740 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10704 chr3R 13756592 13756646 + 14 NA promoter-TSS (FBgn0263995) protein_coding-promoter-TSS (FBgn0263995) -13209 FBgn0263995 FBgn0263995 FBtr0330280 cpo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4872 chr2R 8798595 8798715 + 14 NA Intergenic Intergenic -4847 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2753 chr2L 17797342 17797456 + 14 NA exon (FBgn0262018, exon 9 of 14) protein_coding-exon (FBgn0262018, exon 9 of 14) 4987 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5425 chr2R 13714898 13714976 + 14 NA exon (FBgn0259211, exon 5 of 15) protein_coding-exon (FBgn0259211, exon 5 of 15) 3867 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12999 chr4 1000649 1000724 + 14 NA Intergenic Intergenic 4892 FBgn0083990 FBgn0083990 FBtr0111046 sphinx ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1969 chr2L 14413286 14413418 + 14 NA Intergenic Intergenic -3805 FBgn0004858 FBgn0004858 FBtr0080637 elB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6794 chr3L 1122483 1122605 + 14 NA Intergenic Intergenic -21455 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4919 chr2R 9197832 9197996 + 14 NA Intergenic Intergenic 10807 FBgn0033827 FBgn0033827 FBtr0087753 CG17047 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13735 chrX 13830641 13830806 + 14 NA intron (FBgn0263115, intron 1 of 7) protein_coding-intron (FBgn0263115, intron 1 of 4) -18561 FBgn0030536 FBgn0030536 FBtr0073854 CG11068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1418 chr2L 10118491 10118609 + 14 NA intron (FBgn0083945, intron 10 of 12) protein_coding-intron (FBgn0083945, intron 10 of 12) 4221 FBgn0032184 FBgn0032184 FBtr0079966 CG13135 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5140 chr2R 11003346 11003503 + 14 NA intron (FBgn0015371, intron 1 of 6) protein_coding-intron (FBgn0015371, intron 1 of 4) 662 FBgn0015371 FBgn0015371 FBtr0305216 chn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7095 chr3L 5494818 5494931 + 14 NA Intergenic Intergenic -2816 FBgn0035608 FBgn0035608 FBtr0077152 blanks protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10536 chr3R 12635342 12635519 + 14 NA exon (FBgn0000014, exon 7 of 7) protein_coding-exon (FBgn0000014, exon 7 of 7) 20337 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11126 chr3R 16508656 16508763 + 14 NA Intergenic Intergenic 4804 FBgn0263406 FBgn0263406 FBtr0309185 CR43452 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1644 chr2L 12383782 12383927 + 14 NA intron (FBgn0262475, intron 2 of 6) protein_coding-intron (FBgn0262475, intron 5 of 9) -14420 FBgn0041195 FBgn0041195 FBtr0080365 Pkd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_399 chr2L 2488522 2488642 + 14 NA Intergenic Intergenic 1537 FBgn0031429 FBgn0031429 FBtr0077784 CG15393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4794 chr2R 8100865 8101182 + 14 NA promoter-TSS (FBgn0033701) protein_coding-promoter-TSS (FBgn0033701) -486 FBgn0033701 FBgn0033701 FBtr0087995 CG13171 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2733 chr2L 17720739 17720945 + 14 NA exon (FBgn0015609, exon 3 of 22) protein_coding-exon (FBgn0015609, exon 3 of 22) 16161 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2693 chr2L 17560806 17560975 + 14 NA Intergenic Intergenic -5125 FBgn0032650 FBgn0032650 FBtr0080990 CG7094 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5046 chr2R 10287486 10287603 + 14 NA Intergenic Intergenic 9253 FBgn0033933 FBgn0033933 FBtr0087486 CG10104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13447 chrX 1397022 1397217 + 14 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 1 of 10) 4723 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9133 chr3R 1974372 1974503 + 14 NA Intergenic Intergenic 8512 FBgn0051559 FBgn0051559 FBtr0078616 CG31559 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12427 chr3R 25535281 25535344 + 14 NA Intergenic Intergenic -4949 FBgn0039684 FBgn0039684 FBtr0085455 Obp99d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1898 chr2L 14247732 14247844 + 14 NA Intergenic Intergenic -13666 FBgn0016930 FBgn0016930 FBtr0329933 smi35A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8060 chr3L 14514243 14514397 + 14 NA intron (FBgn0036427, intron 1 of 2) protein_coding-intron (FBgn0087007, intron 2 of 8) 470 FBgn0036427 FBgn0036427 FBtr0333038 CG4613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10053 chr3R 9155342 9155642 + 14 NA exon (FBgn0038139, exon 8 of 8) protein_coding-exon (FBgn0038139, exon 8 of 8) 4393 FBgn0038139 FBgn0038139 FBtr0100149 CG8795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12804 chr3R 27762800 27763074 + 14 NA exon (FBgn0011224, exon 1 of 12) protein_coding-exon (FBgn0011224, exon 1 of 12) 43954 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9903 chr3R 8030777 8030910 + 14 NA Intergenic Intergenic -1454 FBgn0051356 FBgn0051356 FBtr0082558 tRNA:CR31356 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4588 chr2R 6595106 6595160 + 14 NA exon (FBgn0024836, exon 1 of 4) protein_coding-exon (FBgn0024836, exon 1 of 4) -17642 FBgn0033542 FBgn0033542 FBtr0088215 CG12309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4701 chr2R 7512370 7512480 + 14 NA exon (FBgn0033638, exon 3 of 8) protein_coding-exon (FBgn0033638, exon 3 of 8) -5897 FBgn0086712 FBgn0086712 FBtr0088090 Egm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8037 chr3L 14316973 14317059 + 14 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) -5430 FBgn0036419 FBgn0036419 FBtr0075744 CG13482 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12538 chr3R 26486260 26486377 + 14 NA Intergenic Intergenic 10635 FBgn0085462 FBgn0085462 FBtr0304711 CG34433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12890 chr3RHet 2084865 2085026 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5621 chr2R 15529607 15529881 + 14 NA promoter-TSS (FBgn0034461) protein_coding-promoter-TSS (FBgn0034461) -708 FBgn0034461 FBgn0034461 FBtr0086470 CG15124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6964 chr3L 2951070 2951169 + 14 NA exon (FBgn0052846, exon 2 of 2) protein_coding-exon (FBgn0052846, exon 2 of 2) 499 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6440 chr2RHet 1091665 1091775 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2977 chr2L 19191911 19192183 + 14 NA intron (FBgn0015380, intron 1 of 3) protein_coding-intron (FBgn0015380, intron 1 of 3) 1701 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1492 chr2L 11087704 11087824 + 14 NA promoter-TSS (FBgn0032338) protein_coding-promoter-TSS (FBgn0032338) -567 FBgn0032338 FBgn0032338 FBtr0307171 CG16854 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8718 chr3L 23054502 23054595 + 14 NA Intergenic Intergenic 34023 FBgn0024733 FBgn0024733 FBtr0299870 RpL10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8631 chr3L 21223804 21223932 + 14 NA intron (FBgn0004865, intron 2 of 6) protein_coding-intron (FBgn0004865, intron 1 of 5) 4159 FBgn0004865 FBgn0004865 FBtr0078307 Eip78C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8157 chr3L 15618478 15618538 + 14 NA intron (FBgn0259236, intron 1 of 1) protein_coding-intron (FBgn0259236, intron 1 of 1) 5507 FBgn0036522 FBgn0036522 FBtr0075570 CG7372 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12900 chr3RHet 2290790 2290870 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8247 chr3L 16322969 16323076 + 14 NA TTS (FBgn0036610) protein_coding-TTS (FBgn0036610) 127 FBgn0053061 FBgn0053061 FBtr0310460 CG33061 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7112 chr3L 5826916 5827137 + 14 NA intron (FBgn0003984, intron 1 of 5) protein_coding-intron (FBgn0003984, intron 1 of 5) 11738 FBgn0003984 FBgn0003984 FBtr0077082 vn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7182 chr3L 6355916 6356012 + 14 NA Intergenic Intergenic -10474 FBgn0035699 FBgn0035699 FBtr0077007 CG13300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11758 chr3R 22863106 22863201 + 14 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -11322 FBgn0039476 FBgn0039476 FBtr0085149 CG6271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5369 chr2R 13185497 13185551 + 14 NA exon (FBgn0261642, exon 3 of 3) protein_coding-exon (FBgn0261642, exon 3 of 3) 9283 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3664 chr2L 22225606 22225906 + 14 NA promoter-TSS (FBgn0042701) pseudogene-promoter-TSS (FBgn0042701) -395 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10477 chr3R 12319456 12319510 + 14 NA intron (FBgn0038439, intron 1 of 11) protein_coding-intron (FBgn0038439, intron 1 of 11) 1658 FBgn0038439 FBgn0038439 FBtr0301702 Cad89D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7191 chr3L 6389947 6390148 + 14 NA Intergenic Intergenic -3645 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9607 chr3R 5491872 5492211 + 14 NA exon (FBgn0037726, exon 14 of 35) protein_coding-exon (FBgn0037726, exon 14 of 35) 8324 FBgn0037726 FBgn0037726 FBtr0309028 CG9492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6160 chr2R 20093812 20094154 + 14 NA exon (FBgn0034990, exon 1 of 4) protein_coding-exon (FBgn0034990, exon 1 of 4) 463 FBgn0034990 FBgn0034990 FBtr0072276 CG11406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3260 chr2L 20607348 20607402 + 14 NA exon (FBgn0263583, exon 1 of 1) ncRNA-exon (FBgn0263583, exon 1 of 1) 472 FBgn0263583 FBgn0263583 FBtr0309809 CR43608 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8867 chr3LHet 877349 877403 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10881 chr3R 15025767 15025864 + 14 NA exon (FBgn0051475, exon 3 of 4) protein_coding-exon (FBgn0051475, exon 3 of 4) -12100 FBgn0025680 FBgn0025680 FBtr0083736 cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11936 chr3R 23623640 23623715 + 14 NA intron (FBgn0085382, intron 4 of 11) protein_coding-intron (FBgn0085382, intron 4 of 11) -47134 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11895 chr3R 23452965 23453130 + 14 NA intron (FBgn0039530, intron 2 of 10) protein_coding-intron (FBgn0039530, intron 2 of 10) -1316 FBgn0039529 FBgn0039529 FBtr0085200 CG5612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6655 chr2RHet 2362456 2362531 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11074 chr3R 16170443 16170528 + 14 NA TTS (FBgn0038789) protein_coding-TTS (FBgn0038789) 5496 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7213 chr3L 6657621 6657698 + 14 NA exon (FBgn0035709, exon 4 of 4) protein_coding-exon (FBgn0035709, exon 4 of 4) 1082 FBgn0035709 FBgn0035709 FBtr0076963 eIF4E-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11962 chr3R 23722365 23722616 + 14 NA intron (FBgn0085382, intron 1 of 11) protein_coding-intron (FBgn0085382, intron 1 of 11) 9075 FBgn0085382 FBgn0085382 FBtr0112563 CG34353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6295 chr2RHet 28572 28626 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2525 chr2L 16809255 16809427 + 14 NA intron (FBgn0086673, intron 1 of 2) protein_coding-intron (FBgn0086673, intron 1 of 2) 4457 FBgn0086673 FBgn0086673 FBtr0080914 CG13272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9367 chr3R 3499874 3499928 + 14 NA intron (FBgn0051146, intron 7 of 11) protein_coding-intron (FBgn0051146, intron 7 of 11) 15930 FBgn0051146 FBgn0051146 FBtr0305969 Nlg1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_891 chr2L 6529432 6529615 + 14 NA exon (FBgn0000320, exon 3 of 5) protein_coding-exon (FBgn0000320, exon 3 of 5) 986 FBgn0000320 FBgn0000320 FBtr0306113 eya protein_coding Nup98-S2-pascual-garcia2017_R1_peak_720 chr2L 5125284 5125338 + 14 NA exon (FBgn0261836, exon 6 of 18) protein_coding-exon (FBgn0261836, exon 6 of 18) -25109 FBgn0031684 FBgn0031684 FBtr0079025 CG8680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11204 chr3R 17249802 17250023 + 14 NA intron (FBgn0008651, intron 1 of 3) protein_coding-intron (FBgn0008651, intron 1 of 2) 9943 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2527 chr2L 16812118 16812200 + 14 NA intron (FBgn0086673, intron 2 of 2) protein_coding-intron (FBgn0086673, intron 2 of 2) -4949 FBgn0004797 FBgn0004797 FBtr0080918 mdy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10377 chr3R 11720385 11720583 + 14 NA Intergenic Intergenic -4647 FBgn0038380 FBgn0038380 FBtr0083249 CG14877 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1634 chr2L 12345848 12345953 + 14 NA intron (FBgn0262475, intron 1 of 9) protein_coding-intron (FBgn0262475, intron 1 of 9) -1634 FBgn0264361 FBgn0264361 FBtr0332235 CG43813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2315 chr2L 15624626 15624908 + 14 NA Intergenic Intergenic -1209 FBgn0028946 FBgn0028946 FBtr0080781 Or35a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10510 chr3R 12502848 12502963 + 14 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -21416 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9596 chr3R 5212517 5212707 + 14 NA intron (FBgn0000723, intron 3 of 13) protein_coding-intron (FBgn0000723, intron 3 of 12) 7656 FBgn0000723 FBgn0000723 FBtr0082054 Fps85D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2415 chr2L 16090698 16091051 + 14 NA Intergenic Intergenic -4135 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2718 chr2L 17652687 17652852 + 14 NA exon (FBgn0015609, exon 19 of 22) protein_coding-exon (FBgn0015609, exon 19 of 22) 24910 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4589 chr2R 6603289 6603553 + 14 NA exon (FBgn0024836, exon 3 of 4) protein_coding-exon (FBgn0024836, exon 3 of 4) -9354 FBgn0033542 FBgn0033542 FBtr0088215 CG12309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8134 chr3L 15354912 15354981 + 14 NA Intergenic Intergenic 25154 FBgn0036494 FBgn0036494 FBtr0075614 Toll-6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9178 chr3R 2307559 2307649 + 14 NA promoter-TSS (FBgn0037448) protein_coding-promoter-TSS (FBgn0037448) -5107 FBgn0037448 FBgn0037448 FBtr0308036 CG15186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1726 chr2L 12856715 12856818 + 14 NA Intergenic Intergenic -33979 FBgn0015399 FBgn0015399 FBtr0332210 kek1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7878 chr3L 13189649 13189765 + 14 NA Intergenic Intergenic -14607 FBgn0052129 FBgn0052129 FBtr0075828 tRNA:CR32129 tRNA Nup98-S2-pascual-garcia2017_R1_peak_2381 chr2L 16003165 16003393 + 14 NA TTS (FBgn0264373) ncRNA-TTS (FBgn0264373) 362 FBgn0085196 FBgn0085196 FBtr0112358 CG34167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5132 chr2R 10953247 10953412 + 14 NA Intergenic Intergenic -9583 FBgn0053467 FBgn0053467 FBtr0089861 CG33467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_678 chr2L 4683914 4683973 + 14 NA exon (FBgn0000227, exon 2 of 2) protein_coding-exon (FBgn0000227, exon 2 of 2) 516 FBgn0000227 FBgn0000227 FBtr0077423 Bsg25A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_673 chr2L 4639035 4639224 + 14 NA Intergenic Intergenic -2167 FBgn0083938 FBgn0083938 FBtr0110769 BG642163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3060 chr2L 19650183 19650288 + 14 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 50733 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9358 chr3R 3413973 3414088 + 14 NA intron (FBgn0083963, intron 4 of 12) protein_coding-intron (FBgn0083963, intron 4 of 12) -39186 FBgn0015568 FBgn0015568 FBtr0081544 alpha-Est1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8376 chr3L 17325898 17325983 + 14 NA Intergenic Intergenic -3671 FBgn0036709 FBgn0036709 FBtr0075247 Or74a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5337 chr2R 12791093 12791158 + 14 NA Intergenic Intergenic 5037 FBgn0004784 FBgn0004784 FBtr0087047 inaC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1290 chr2L 8979005 8979089 + 14 NA exon (FBgn0032084, exon 4 of 7) protein_coding-exon (FBgn0032084, exon 4 of 7) -1612 FBgn0040963 FBgn0040963 FBtr0079760 CG18662 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9019 chr3R 946118 946296 + 14 NA Intergenic Intergenic -7603 FBgn0037293 FBgn0037293 FBtr0078842 CG12007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8580 chr3L 20047910 20048112 + 14 NA Intergenic Intergenic -25891 FBgn0036932 FBgn0036932 FBtr0302366 CG14184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4101 chr2R 2925812 2925943 + 14 NA promoter-TSS (FBgn0033131) pseudogene-promoter-TSS (FBgn0033131) 678 FBgn0053914 FBgn0053914 FBtr0307215 CG33914 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9849 chr3R 7555039 7555481 + 14 NA exon (FBgn0037941, exon 4 of 8) protein_coding-exon (FBgn0037941, exon 4 of 8) -5909 FBgn0037942 FBgn0037942 FBtr0082430 CG14721 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8642 chr3L 21436782 21436992 + 14 NA intron (FBgn0037083, intron 2 of 3) protein_coding-intron (FBgn0037083, intron 2 of 3) 1032 FBgn0037083 FBgn0037083 FBtr0331821 CG5656 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_547 chr2L 3743809 3743962 + 14 NA intron (FBgn0031568, intron 1 of 12) protein_coding-intron (FBgn0031568, intron 1 of 12) -13371 FBgn0263846 FBgn0263846 FBtr0321309 CG43707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1363 chr2L 9602253 9602356 + 14 NA Intergenic Intergenic -1451 FBgn0032132 FBgn0032132 FBtr0114535 CG4382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8204 chr3L 16022539 16022688 + 14 NA exon (FBgn0044028, exon 2 of 4) protein_coding-exon (FBgn0044028, exon 2 of 4) -1735 FBgn0263570 FBgn0263570 FBtr0309724 mir-4941 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11856 chr3R 23270568 23270831 + 14 NA Intergenic Intergenic 4665 FBgn0263401 FBgn0263401 FBtr0309178 CG43447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_792 chr2L 5632102 5632202 + 14 NA exon (FBgn0051646, exon 12 of 13) protein_coding-exon (FBgn0051646, exon 12 of 13) -8392 FBgn0031726 FBgn0031726 FBtr0100853 Cyp6a16Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5089 chr2R 10615472 10615573 + 14 NA Intergenic Intergenic 11225 FBgn0263376 FBgn0263376 FBtr0309057 CR43428 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1467 chr2L 10775401 10775650 + 14 NA intron (FBgn0051869, intron 4 of 7) protein_coding-intron (FBgn0051869, intron 3 of 6) 4657 FBgn0032299 FBgn0032299 FBtr0080136 CG17127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12263 chr3R 24929569 24929686 + 14 NA exon (FBgn0039633, exon 6 of 9) protein_coding-exon (FBgn0039633, exon 6 of 9) 8915 FBgn0039634 FBgn0039634 FBtr0085416 CG11874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11334 chr3R 18788072 18788231 + 14 NA TTS (FBgn0017590) protein_coding-TTS (FBgn0017590) 2201 FBgn0263664 FBgn0263664 FBtr0310111 CR43655 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5850 chr2R 17445271 17445421 + 14 NA exon (FBgn0003731, exon 5 of 5) protein_coding-exon (FBgn0003731, exon 5 of 5) 10272 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_798 chr2L 5664172 5664355 + 14 NA intron (FBgn0031728, intron 1 of 1) protein_coding-intron (FBgn0031728, intron 1 of 2) 1414 FBgn0031728 FBgn0031728 FBtr0079112 Hsp60C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10121 chr3R 9669150 9669356 + 14 NA Intergenic Intergenic -3601 FBgn0051495 FBgn0051495 FBtr0082882 CG31495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3290 chr2L 20725949 20726241 + 14 NA exon (FBgn0032878, exon 1 of 4) protein_coding-exon (FBgn0032878, exon 1 of 4) 456 FBgn0032878 FBgn0032878 FBtr0081396 CG9316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_535 chr2L 3665865 3666028 + 14 NA intron (FBgn0085369, intron 1 of 7) protein_coding-intron (FBgn0085369, intron 1 of 7) 2605 FBgn0259951 FBgn0259951 FBtr0300296 Sfp24Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9947 chr3R 8416154 8416305 + 14 NA intron (FBgn0038063, intron 1 of 6) protein_coding-intron (FBgn0038063, intron 1 of 6) -29341 FBgn0038063 FBgn0038063 FBtr0330120 Octbeta2R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8476 chr3L 18075371 18075536 + 14 NA intron (FBgn0262898, intron 2 of 2) protein_coding-intron (FBgn0262898, intron 2 of 2) 2957 FBgn0262898 FBgn0262898 FBtr0306318 CG43253 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5725 chr2R 16273427 16273588 + 14 NA Intergenic Intergenic -30949 FBgn0034507 FBgn0034507 FBtr0290122 CG11192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1267 chr2L 8897441 8897771 + 14 NA Intergenic Intergenic -1198 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1963 chr2L 14391301 14391603 + 14 NA exon (FBgn0004858, exon 3 of 3) protein_coding-exon (FBgn0004858, exon 3 of 3) -10282 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13071 chrU 129765 129889 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9868 chr3R 7728618 7728696 + 14 NA intron (FBgn0037963, intron 3 of 15) protein_coding-intron (FBgn0037963, intron 3 of 15) 5353 FBgn0085336 FBgn0085336 FBtr0301079 CG34307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11751 chr3R 22832535 22832598 + 14 NA exon (FBgn0039471, exon 2 of 2) protein_coding-exon (FBgn0039471, exon 2 of 2) 211 FBgn0039471 FBgn0039471 FBtr0085077 CG6295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11496 chr3R 21728700 21728905 + 14 NA TTS (FBgn0051091) protein_coding-TTS (FBgn0051091) 437 FBgn0051089 FBgn0051089 FBtr0084942 CG31089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9680 chr3R 6261970 6262136 + 14 NA exon (FBgn0037817, exon 6 of 6) protein_coding-exon (FBgn0037817, exon 6 of 6) 1542 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4843 chr2R 8653589 8653643 + 14 NA Intergenic Intergenic 3999 FBgn0033774 FBgn0033774 FBtr0087854 CG12374 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1498 chr2L 11144987 11145088 + 14 NA exon (FBgn0051867, exon 1 of 1) protein_coding-exon (FBgn0051867, exon 1 of 1) 380 FBgn0051867 FBgn0051867 FBtr0080224 CG31867 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5262 chr2R 12137218 12137384 + 14 NA promoter-TSS (FBgn0261612) protein_coding-promoter-TSS (FBgn0261612) -7862 FBgn0034099 FBgn0034099 FBtr0087188 CG15708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_721 chr2L 5125916 5126061 + 14 NA exon (FBgn0261836, exon 7 of 18) protein_coding-exon (FBgn0261836, exon 7 of 18) -25761 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9867 chr3R 7725750 7725966 + 14 NA exon (FBgn0037963, exon 8 of 16) protein_coding-exon (FBgn0037963, exon 8 of 16) 2554 FBgn0085336 FBgn0085336 FBtr0301079 CG34307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6886 chr3L 2018468 2018527 + 14 NA Intergenic Intergenic 3461 FBgn0259703 FBgn0259703 FBtr0299956 CG42357 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4532 chr2R 6219088 6219186 + 14 NA intron (FBgn0261698, intron 16 of 27) protein_coding-intron (FBgn0261698, intron 17 of 28) -11132 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4987 chr2R 9679674 9679902 + 14 NA exon (FBgn0264359, exon 2 of 2) ncRNA-exon (FBgn0264359, exon 2 of 2) 337 FBgn0264359 FBgn0264359 FBtr0332254 CR43811 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13325 chrUextra 604535 604688 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5351 chr2R 13060358 13060501 + 14 NA Intergenic Intergenic -6281 FBgn0034204 FBgn0034204 FBtr0086997 CG10953 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2547 chr2L 16939143 16939220 + 14 NA Intergenic Intergenic 6193 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12119 chr3R 24324288 24324402 + 14 NA intron (FBgn0013813, intron 18 of 45) protein_coding-intron (FBgn0013813, intron 19 of 46) 11670 FBgn0013813 FBgn0013813 FBtr0301303 Dhc98D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11047 chr3R 16002959 16003083 + 14 NA Intergenic Intergenic 7863 FBgn0038774 FBgn0038774 FBtr0083866 CG5023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10599 chr3R 13080043 13080233 + 14 NA Intergenic Intergenic -6540 FBgn0038494 FBgn0038494 FBtr0083411 beat-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6533 chr2RHet 1901674 1901956 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7766 chr3L 12327844 12328303 + 14 NA exon (FBgn0052105, exon 2 of 3) protein_coding-exon (FBgn0052105, exon 2 of 3) -1703 FBgn0036277 FBgn0036277 FBtr0075954 CG10418 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_161 chr2L 1055096 1055219 + 14 NA intron (FBgn0003310, intron 2 of 4) protein_coding-intron (FBgn0003310, intron 2 of 4) 17911 FBgn0031296 FBgn0031296 FBtr0301087 CG4415 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5078 chr2R 10553739 10553892 + 14 NA promoter-TSS (FBgn0033953) protein_coding-promoter-TSS (FBgn0033953) 507 FBgn0033954 FBgn0033954 FBtr0087480 CG12860 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6016 chr2R 18788461 18788651 + 14 NA intron (FBgn0034797, intron 1 of 11) protein_coding-intron (FBgn0034797, intron 1 of 10) 4860 FBgn0034797 FBgn0034797 FBtr0304795 nahoda protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7518 chr3L 9938079 9938224 + 14 NA exon (FBgn0085385, exon 3 of 20) protein_coding-exon (FBgn0085385, exon 3 of 20) 23266 FBgn0036062 FBgn0036062 FBtr0076355 CG6685 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5812 chr2R 17113667 17113824 + 14 NA intron (FBgn0034606, intron 2 of 7) protein_coding-intron (FBgn0034606, intron 2 of 7) -8461 FBgn0034605 FBgn0034605 FBtr0110814 CG15661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12379 chr3R 25465355 25465473 + 14 NA intron (FBgn0015129, intron 4 of 5) protein_coding-intron (FBgn0015129, intron 4 of 4) 20292 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2375 chr2L 15976827 15976916 + 14 NA Intergenic Intergenic -2664 FBgn0028858 FBgn0028858 FBtr0080800 CG10839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11129 chr3R 16522245 16522299 + 14 NA intron (FBgn0024944, intron 6 of 6) protein_coding-intron (FBgn0024944, intron 6 of 6) 17991 FBgn0024944 FBgn0024944 FBtr0330712 Oamb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7857 chr3L 13046874 13047057 + 14 NA Intergenic Intergenic 6888 FBgn0036342 FBgn0036342 FBtr0075887 CG11279 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9632 chr3R 5785208 5785366 + 14 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 26495 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6320 chr2RHet 144666 144886 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7335 chr3L 7630944 7631108 + 14 NA intron (FBgn0035802, intron 14 of 16) protein_coding-intron (FBgn0035802, intron 12 of 14) -1791 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8210 chr3L 16064652 16064831 + 14 NA intron (FBgn0005536, intron 14 of 17) protein_coding-intron (FBgn0005536, intron 13 of 15) -10910 FBgn0053258 FBgn0053258 FBtr0301030 CG33258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_666 chr2L 4567728 4567782 + 14 NA intron (FBgn0053196, intron 5 of 66) protein_coding-intron (FBgn0053196, intron 5 of 46) 10446 FBgn0031613 FBgn0031613 FBtr0077444 HP6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2323 chr2L 15651611 15651665 + 14 NA exon (FBgn0028863, exon 4 of 13) protein_coding-exon (FBgn0028863, exon 4 of 13) -9403 FBgn0028864 FBgn0028864 FBtr0080756 CG18477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5615 chr2R 15514000 15514078 + 14 NA intron (FBgn0003435, intron 2 of 10) protein_coding-intron (FBgn0003435, intron 2 of 9) -8745 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10409 chr3R 11919712 11919861 + 14 NA promoter-TSS (FBgn0026059) protein_coding-promoter-TSS (FBgn0026059) -5152 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11770 chr3R 22909021 22909188 + 14 NA TTS (FBgn0039479) protein_coding-TTS (FBgn0039479) 4396 FBgn0039480 FBgn0039480 FBtr0085136 Cpr97Ea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12873 chr3RHet 1668530 1668691 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_712 chr2L 4926510 4926607 + 14 NA intron (FBgn0041150, intron 1 of 10) protein_coding-intron (FBgn0041150, intron 1 of 10) 10024 FBgn0031649 FBgn0031649 FBtr0077394 hoe2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9505 chr3R 4518867 4519034 + 14 NA exon (FBgn0001180, exon 2 of 2) protein_coding-exon (FBgn0001180, exon 2 of 2) 1372 FBgn0001180 FBgn0001180 FBtr0081951 hb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5330 chr2R 12650677 12650731 + 14 NA exon (FBgn0034155, exon 3 of 27) protein_coding-exon (FBgn0034155, exon 3 of 27) 2729 FBgn0259738 FBgn0259738 FBtr0300043 CG42392 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3782 chr2L 22619413 22619575 + 14 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 25033 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12143 chr3R 24408039 24408136 + 14 NA exon (FBgn0000659, exon 1 of 1) protein_coding-exon (FBgn0000659, exon 1 of 1) 2747 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10513 chr3R 12513858 12513983 + 14 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -32431 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10506 chr3R 12482971 12483152 + 14 NA TTS (FBgn0003944) protein_coding-TTS (FBgn0003944) -1572 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5037 chr2R 10199369 10199514 + 14 NA intron (FBgn0085408, intron 1 of 9) protein_coding-intron (FBgn0085408, intron 1 of 9) -9583 FBgn0033921 FBgn0033921 FBtr0087562 tej protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4111 chr2R 3082642 3082932 + 14 NA intron (FBgn0003090, intron 2 of 6) protein_coding-intron (FBgn0003090, intron 1 of 5) 8020 FBgn0003090 FBgn0003090 FBtr0089044 pk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10895 chr3R 15110352 15110522 + 14 NA Intergenic Intergenic -3642 FBgn0263405 FBgn0263405 FBtr0309184 CR43451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10624 chr3R 13291659 13291818 + 14 NA Intergenic Intergenic -9240 FBgn0038512 FBgn0038512 FBtr0083443 CG14330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11006 chr3R 15775506 15775599 + 14 NA TTS (FBgn0038756) protein_coding-TTS (FBgn0038756) 1360 FBgn0038756 FBgn0038756 FBtr0083823 CG4783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5678 chr2R 15913026 15913161 + 14 NA Intergenic Intergenic -20601 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8350 chr3L 17190922 17191019 + 14 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 31007 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3940 chr2R 817692 817786 + 14 NA Intergenic Intergenic -19433 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4419 chr2R 5344110 5344331 + 14 NA promoter-TSS (FBgn0259234) protein_coding-promoter-TSS (FBgn0259234) -1767 FBgn0053757 FBgn0053757 FBtr0091758 CG33757 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9287 chr3R 2880525 2880616 + 14 NA TTS (FBgn0024289) protein_coding-TTS (FBgn0024289) 262 FBgn0026563 FBgn0026563 FBtr0081628 CG1979 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7342 chr3L 7744334 7744468 + 14 NA intron (FBgn0052373, intron 2 of 8) protein_coding-intron (FBgn0052373, intron 1 of 7) -3108 FBgn0035817 FBgn0035817 FBtr0076810 CG7409 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2533 chr2L 16863643 16863697 + 14 NA Intergenic Intergenic 2173 FBgn0264440 FBgn0264440 FBtr0332532 CR43858 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10886 chr3R 15059917 15060020 + 14 NA exon (FBgn0038693, exon 22 of 27) protein_coding-exon (FBgn0038693, exon 22 of 27) 4753 FBgn0038692 FBgn0038692 FBtr0083737 CG3773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7863 chr3L 13074790 13074950 + 14 NA exon (FBgn0263661, exon 1 of 1) ncRNA-exon (FBgn0263661, exon 1 of 1) 882 FBgn0263661 FBgn0263661 FBtr0310106 CR43652 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13201 chrU 2074403 2074569 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_685 chr2L 4698883 4699065 + 14 NA intron (FBgn0085380, intron 1 of 5) protein_coding-intron (FBgn0085380, intron 1 of 5) 2614 FBgn0031623 FBgn0031623 FBtr0077420 Taf12L protein_coding Nup98-S2-pascual-garcia2017_R1_peak_60 chr2L 736313 736384 + 14 NA TTS (FBgn0026438) protein_coding-TTS (FBgn0026438) 7936 FBgn0011244 FBgn0011244 FBtr0078000 Hsp60B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_240 chr2L 1398033 1398202 + 14 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 22332 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3348 chr2L 21189531 21189682 + 14 NA intron (FBgn0011829, intron 1 of 5) protein_coding-intron (FBgn0011829, intron 3 of 7) 5896 FBgn0011829 FBgn0011829 FBtr0081496 Ret protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8720 chr3L 23228354 23228438 + 14 NA intron (FBgn0037212, intron 4 of 10) protein_coding-intron (FBgn0037212, intron 4 of 11) 28627 FBgn0037212 FBgn0037212 FBtr0308331 nAcRalpha-80B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13543 chrX 5362879 5363014 + 14 NA intron (FBgn0029768, intron 2 of 5) protein_coding-intron (FBgn0029768, intron 2 of 5) 22252 FBgn0029768 FBgn0029768 FBtr0070778 SPR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1019 chr2L 7878890 7878999 + 14 NA exon (FBgn0031959, exon 1 of 5) protein_coding-exon (FBgn0031959, exon 1 of 5) 606 FBgn0031959 FBgn0031959 FBtr0079561 spz3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9483 chr3R 4411612 4411739 + 14 NA intron (FBgn0261929, intron 1 of 6) protein_coding-intron (FBgn0261929, intron 1 of 6) 7748 FBgn0261929 FBgn0261929 FBtr0330144 CG42796 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2707 chr2L 17609679 17609843 + 14 NA Intergenic Intergenic 15096 FBgn0261089 FBgn0261089 FBtr0303255 Sytalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_127 chr2L 955132 955198 + 14 NA intron (FBgn0028481, intron 5 of 9) protein_coding-intron (FBgn0028481, intron 6 of 10) 32372 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2374 chr2L 15972311 15972650 + 14 NA Intergenic Intergenic -7055 FBgn0028858 FBgn0028858 FBtr0080800 CG10839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8084 chr3L 14809480 14809534 + 14 NA intron (FBgn0036454, intron 2 of 7) protein_coding-intron (FBgn0036454, intron 2 of 18) 11155 FBgn0036454 FBgn0036454 FBtr0110825 CG17839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10481 chr3R 12333663 12333730 + 14 NA intron (FBgn0259244, intron 1 of 15) protein_coding-intron (FBgn0259244, intron 1 of 16) 5173 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11944 chr3R 23639423 23639722 + 14 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -31239 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6310 chr2RHet 106264 106431 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13140 chrU 1047050 1047261 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9641 chr3R 5885520 5885698 + 14 NA promoter-TSS (FBgn0037783) protein_coding-promoter-TSS (FBgn0037783) -410 FBgn0037783 FBgn0037783 FBtr0082176 Npc2c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2893 chr2L 18420114 18420308 + 14 NA Intergenic Intergenic 23017 FBgn0261597 FBgn0261597 FBtr0081090 RpS26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2419 chr2L 16100431 16100541 + 14 NA Intergenic Intergenic 5477 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12234 chr3R 24776291 24776391 + 14 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 19735 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9330 chr3R 3158343 3158397 + 14 NA Intergenic Intergenic -12421 FBgn0051496 FBgn0051496 FBtr0081582 CG31496 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5718 chr2R 16225851 16225932 + 14 NA Intergenic Intergenic -3642 FBgn0034505 FBgn0034505 FBtr0086286 CG16739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_585 chr2L 4107539 4107673 + 14 NA exon (FBgn0000547, exon 8 of 9) protein_coding-exon (FBgn0000547, exon 8 of 9) -12757 FBgn0020376 FBgn0020376 FBtr0077466 Sr-CIII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6023 chr2R 18837673 18837912 + 14 NA TTS (FBgn0052835) ncRNA-TTS (FBgn0052835) 3531 FBgn0052835 FBgn0052835 FBtr0308941 CR32835 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2190 chr2L 15198921 15199033 + 14 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 1432 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12945 chr4 599427 599496 + 14 NA TTS (FBgn0040324) protein_coding-TTS (FBgn0040324) -4310 FBgn0039911 FBgn0039911 FBtr0089080 CG1909 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9918 chr3R 8107337 8107482 + 14 NA exon (FBgn0003651, exon 1 of 3) protein_coding-exon (FBgn0003651, exon 1 of 3) 535 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6032 chr2R 18907645 18907707 + 14 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) -21270 FBgn0034808 FBgn0034808 FBtr0071988 CG9896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_789 chr2L 5610629 5610754 + 14 NA intron (FBgn0031725, intron 3 of 9) protein_coding-intron (FBgn0031725, intron 5 of 11) 7056 FBgn0031725 FBgn0031725 FBtr0302934 CG14010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5279 chr2R 12298491 12298545 + 14 NA intron (FBgn0264273, intron 2 of 15) protein_coding-intron (FBgn0264273, intron 1 of 13) 8385 FBgn0029153 FBgn0029153 FBtr0100603 Menl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7779 chr3L 12429944 12430037 + 14 NA Intergenic Intergenic -4222 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3822 chr2L 22745193 22745292 + 14 NA exon (FBgn0041004, exon 6 of 6) protein_coding-exon (FBgn0041004, exon 6 of 6) 8290 FBgn0041004 FBgn0041004 FBtr0306550 CG17715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6392 chr2RHet 669066 669454 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5197 chr2R 11528432 11528536 + 14 NA intron (FBgn0260429, intron 3 of 4) protein_coding-intron (FBgn0260429, intron 3 of 3) -16143 FBgn0262403 FBgn0262403 FBtr0304316 mir-278 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_612 chr2L 4281827 4282160 + 14 NA Intergenic Intergenic -1155 FBgn0010473 FBgn0010473 FBtr0301864 tutl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9940 chr3R 8361689 8361882 + 14 NA intron (FBgn0250910, intron 2 of 7) protein_coding-intron (FBgn0250910, intron 2 of 9) 9875 FBgn0028374 FBgn0028374 FBtr0082639 hug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10181 chr3R 10165915 10166084 + 14 NA intron (FBgn0024321, intron 5 of 5) protein_coding-intron (FBgn0024321, intron 3 of 3) 12213 FBgn0003480 FBgn0003480 FBtr0082933 spn-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8663 chr3L 21790973 21791124 + 14 NA Intergenic Intergenic 15750 FBgn0264487 FBgn0264487 FBtr0332814 CG43895 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1024 chr2L 7909239 7909378 + 14 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -18714 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6076 chr2R 19262087 19262252 + 14 NA exon (FBgn0034854, exon 5 of 8) protein_coding-exon (FBgn0034854, exon 5 of 8) 2366 FBgn0034854 FBgn0034854 FBtr0072036 CG3493 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_863 chr2L 6252373 6252448 + 14 NA promoter-TSS (FBgn0053531) protein_coding-promoter-TSS (FBgn0053531) -713 FBgn0053531 FBgn0053531 FBtr0301305 Ddr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9299 chr3R 3034519 3034624 + 14 NA promoter-TSS (FBgn0250845) protein_coding-promoter-TSS (FBgn0250845) -434 FBgn0250845 FBgn0250845 FBtr0081604 CG1288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12829 chr3RHet 273017 273183 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7979 chr3L 13882639 13882693 + 14 NA exon (FBgn0264006, exon 4 of 17) protein_coding-exon (FBgn0264006, exon 4 of 17) 7795 FBgn0036382 FBgn0036382 FBtr0075755 CG13737 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11905 chr3R 23481467 23481586 + 14 NA intron (FBgn0051057, intron 1 of 1) protein_coding-intron (FBgn0051057, intron 1 of 6) 991 FBgn0051057 FBgn0051057 FBtr0331369 tau protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9394 chr3R 3702019 3702134 + 14 NA intron (FBgn0037525, intron 2 of 14) protein_coding-intron (FBgn0037525, intron 2 of 14) 10379 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_334 chr2L 1825649 1825884 + 14 NA exon (FBgn0051664, exon 3 of 5) protein_coding-exon (FBgn0051664, exon 3 of 5) 612 FBgn0051664 FBgn0051664 FBtr0303377 CG31664 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1345 chr2L 9466641 9467021 + 14 NA Intergenic Intergenic -3495 FBgn0264269 FBgn0264269 FBtr0331293 CR43769 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2379 chr2L 15990615 15990763 + 14 NA TTS (FBgn0263331) ncRNA-TTS (FBgn0263331) 933 FBgn0263331 FBgn0263331 FBtr0308754 CR43412 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12790 chr3R 27692510 27692675 + 14 NA intron (FBgn0011224, intron 9 of 16) protein_coding-intron (FBgn0011224, intron 6 of 13) 41026 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8179 chr3L 15846763 15846825 + 14 NA intron (FBgn0036542, intron 13 of 15) protein_coding-intron (FBgn0036542, intron 12 of 14) 2683 FBgn0036541 FBgn0036541 FBtr0075533 CG12486 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6352 chr2RHet 493074 493185 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11042 chr3R 15963593 15963721 + 14 NA Intergenic Intergenic 1986 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1478 chr2L 10872661 10872843 + 14 NA Intergenic Intergenic 2585 FBgn0032311 FBgn0032311 FBtr0080144 CG12517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6589 chr2RHet 2066462 2066639 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12528 chr3R 26336115 26336169 + 14 NA TTS (FBgn0054041) protein_coding-TTS (FBgn0054041) 1794 FBgn0039783 FBgn0039783 FBtr0085685 PH4alphaNE2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4420 chr2R 5345802 5345973 + 14 NA exon (FBgn0259234, exon 1 of 18) protein_coding-exon (FBgn0259234, exon 1 of 18) -3434 FBgn0053757 FBgn0053757 FBtr0091758 CG33757 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9653 chr3R 5950640 5950787 + 14 NA intron (FBgn0001321, intron 1 of 5) protein_coding-intron (FBgn0001321, intron 1 of 5) 673 FBgn0001321 FBgn0001321 FBtr0082194 knk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13712 chrX 13298599 13298724 + 14 NA promoter-TSS (FBgn0030484) protein_coding-promoter-TSS (FBgn0030484) -128 FBgn0030484 FBgn0030484 FBtr0073778 CG1681 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10783 chr3R 14314226 14314331 + 14 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 57030 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11519 chr3R 21795609 21795824 + 14 NA Intergenic Intergenic -2578 FBgn0259146 FBgn0259146 FBtr0299575 CG42261 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7776 chr3L 12425179 12425740 + 14 NA exon (FBgn0036285, exon 1 of 6) protein_coding-exon (FBgn0036285, exon 1 of 6) 309 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6698 chr3L 73526 73580 + 14 NA promoter-TSS (FBgn0264720) ncRNA-promoter-TSS (FBgn0264720) -452 FBgn0264720 FBgn0264720 FBtr0334095 CR43988 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9831 chr3R 7361621 7361845 + 14 NA exon (FBgn0053512, exon 4 of 6) protein_coding-exon (FBgn0053512, exon 4 of 6) 884 FBgn0053512 FBgn0053512 FBtr0300492 dpr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11118 chr3R 16472847 16473046 + 14 NA exon (FBgn0051201, exon 4 of 13) protein_coding-exon (FBgn0051201, exon 4 of 13) 1490 FBgn0051201 FBgn0051201 FBtr0110837 GluRIIE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12797 chr3R 27746819 27747032 + 14 NA intron (FBgn0011224, intron 5 of 14) protein_coding-intron (FBgn0011224, intron 4 of 13) 59966 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12074 chr3R 24139349 24139517 + 14 NA Intergenic Intergenic -9106 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7337 chr3L 7638384 7638558 + 14 NA Intergenic Intergenic -3723 FBgn0035805 FBgn0035805 FBtr0076822 CG7506 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7455 chr3L 8906378 8906453 + 14 NA promoter-TSS (FBgn0035935) protein_coding-promoter-TSS (FBgn0035935) 773 FBgn0035936 FBgn0035936 FBtr0076508 Tsp66E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9020 chr3R 947157 947226 + 14 NA Intergenic Intergenic -6619 FBgn0037293 FBgn0037293 FBtr0078842 CG12007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2998 chr2L 19276065 19276170 + 14 NA Intergenic Intergenic -13224 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9788 chr3R 7018112 7018494 + 14 NA Intergenic Intergenic -3523 FBgn0037870 FBgn0037870 FBtr0082341 CG18577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_728 chr2L 5163933 5163987 + 14 NA exon (FBgn0261836, exon 6 of 6) protein_coding-exon (FBgn0261836, exon 6 of 6) 12211 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6484 chr2RHet 1554744 1554893 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11135 chr3R 16556152 16556206 + 14 NA Intergenic Intergenic -1174 FBgn0051205 FBgn0051205 FBtr0300451 CG31205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6182 chr2R 20220483 20220774 + 14 NA exon (FBgn0005638, exon 1 of 1) protein_coding-exon (FBgn0005638, exon 1 of 1) 1201 FBgn0005638 FBgn0005638 FBtr0072272 slbo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7848 chr3L 12955627 12955800 + 14 NA Intergenic Intergenic 3126 FBgn0041622 FBgn0041622 FBtr0075902 Or69a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_864 chr2L 6252889 6253222 + 14 NA promoter-TSS (FBgn0053531) protein_coding-promoter-TSS (FBgn0053531) -68 FBgn0053531 FBgn0053531 FBtr0301305 Ddr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5321 chr2R 12590119 12590173 + 14 NA intron (FBgn0050463, intron 2 of 10) protein_coding-intron (FBgn0050463, intron 3 of 11) 10943 FBgn0013763 FBgn0013763 FBtr0087111 CG5210 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8824 chr3L 24120904 24121093 + 14 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 53669 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5342 chr2R 12877372 12877563 + 14 NA intron (FBgn0004580, intron 8 of 10) protein_coding-intron (FBgn0004580, intron 8 of 10) 8632 FBgn0050461 FBgn0050461 FBtr0100252 CG30461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6651 chr2RHet 2352513 2352569 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7074 chr3L 4998317 4998441 + 14 NA intron (FBgn0005775, intron 3 of 7) protein_coding-intron (FBgn0005775, intron 3 of 7) -1502 FBgn0052232 FBgn0052232 FBtr0073373 CG32232 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13653 chrX 11073520 11073669 + 14 NA Intergenic Intergenic -3370 FBgn0030278 FBgn0030278 FBtr0073445 CG15200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9418 chr3R 3901780 3901870 + 14 NA TTS (FBgn0086052) snoRNA-TTS (FBgn0086052) 472 FBgn0086052 FBgn0086052 FBtr0114328 snoRNA:Me18S-G423 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2110 chr2L 14892604 14892732 + 14 NA Intergenic Intergenic -8953 FBgn0013301 FBgn0013301 FBtr0080681 Mst35Bb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_32 chr2L 373736 373882 + 14 NA Intergenic Intergenic -4303 FBgn0000061 FBgn0000061 FBtr0078053 al protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6835 chr3L 1456961 1457130 + 14 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 3 of 7) -6766 FBgn0004635 FBgn0004635 FBtr0072694 rho protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7251 chr3L 6939368 6939602 + 14 NA exon (FBgn0035719, exon 2 of 6) protein_coding-exon (FBgn0035719, exon 2 of 6) 3529 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9877 chr3R 7861592 7861649 + 14 NA TTS (FBgn0037985) protein_coding-TTS (FBgn0037985) 2756 FBgn0037985 FBgn0037985 FBtr0082538 ssp5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4086 chr2R 2785735 2785855 + 14 NA intron (FBgn0050158, intron 2 of 7) protein_coding-intron (FBgn0050158, intron 2 of 7) 6527 FBgn0050158 FBgn0050158 FBtr0086165 CG30158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8490 chr3L 18187351 18187540 + 14 NA Intergenic Intergenic -7149 FBgn0036782 FBgn0036782 FBtr0310156 CG7320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5847 chr2R 17438840 17438952 + 14 NA intron (FBgn0003731, intron 1 of 4) protein_coding-intron (FBgn0003731, intron 1 of 4) 3822 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9995 chr3R 8741737 8741791 + 14 NA promoter-TSS (FBgn0038092) protein_coding-promoter-TSS (FBgn0038092) -80 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3496 chr2L 21861702 21861819 + 14 NA Intergenic Intergenic -32467 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6860 chr3L 1710208 1710386 + 14 NA intron (FBgn0035260, intron 2 of 3) protein_coding-intron (FBgn0035260, intron 2 of 3) -7890 FBgn0035258 FBgn0035258 FBtr0072802 CG13931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2486 chr2L 16557035 16557209 + 14 NA intron (FBgn0259735, intron 1 of 4) protein_coding-intron (FBgn0259735, intron 1 of 2) -7163 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4113 chr2R 3106504 3106666 + 14 NA exon (FBgn0003090, exon 3 of 6) protein_coding-exon (FBgn0003090, exon 3 of 6) 15833 FBgn0026389 FBgn0026389 FBtr0089051 Or43a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10052 chr3R 9149059 9149113 + 14 NA Intergenic Intergenic 10799 FBgn0038139 FBgn0038139 FBtr0100149 CG8795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5950 chr2R 18168327 18168381 + 14 NA exon (FBgn0020307, exon 3 of 6) protein_coding-exon (FBgn0020307, exon 3 of 6) 9929 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9076 chr3R 1522969 1523074 + 14 NA exon (FBgn0261261, exon 3 of 10) protein_coding-exon (FBgn0261261, exon 3 of 10) -4013 FBgn0037365 FBgn0037365 FBtr0078726 CG2104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3007 chr2L 19298684 19298847 + 14 NA exon (FBgn0032768, exon 3 of 4) protein_coding-exon (FBgn0032768, exon 3 of 4) 1086 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5675 chr2R 15894699 15894859 + 14 NA Intergenic Intergenic -2287 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9491 chr3R 4466733 4466835 + 14 NA Intergenic Intergenic 1363 FBgn0012028 FBgn0012028 FBtr0081895 tRNA:Y1:85Ae tRNA Nup98-S2-pascual-garcia2017_R1_peak_13681 chrX 12695169 12695227 + 14 NA promoter-TSS (FBgn0030425) protein_coding-promoter-TSS (FBgn0030425) -496 FBgn0030425 FBgn0030425 FBtr0305591 CG3775 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12575 chr3R 26730192 26730371 + 14 NA Intergenic Intergenic -2398 FBgn0053483 FBgn0053483 FBtr0089295 CG33483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7016 chr3L 3959152 3959241 + 14 NA exon (FBgn0035481, exon 3 of 3) protein_coding-exon (FBgn0035481, exon 3 of 3) 4781 FBgn0035481 FBgn0035481 FBtr0333138 CG12605 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8370 chr3L 17289243 17289388 + 14 NA Intergenic Intergenic -18809 FBgn0262376 FBgn0262376 FBtr0304211 mir-219 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11177 chr3R 16964122 16964196 + 14 NA promoter-TSS (FBgn0250820) protein_coding-promoter-TSS (FBgn0250820) 167 FBgn0250820 FBgn0250820 FBtr0084017 CG5802 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7410 chr3L 8465170 8465224 + 14 NA TTS (FBgn0262719) protein_coding-TTS (FBgn0262719) 22175 FBgn0010825 FBgn0010825 FBtr0076618 Gug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8673 chr3L 22008547 22008730 + 14 NA Intergenic Intergenic 12787 FBgn0037147 FBgn0037147 FBtr0114546 CG7140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_806 chr2L 5729228 5729324 + 14 NA promoter-TSS (FBgn0031733) protein_coding-promoter-TSS (FBgn0031733) -465 FBgn0031733 FBgn0031733 FBtr0079167 CG14006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5086 chr2R 10593727 10593859 + 14 NA intron (FBgn0020269, intron 1 of 5) protein_coding-intron (FBgn0020269, intron 1 of 5) 7334 FBgn0020269 FBgn0020269 FBtr0087477 mspo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7072 chr3L 4967223 4967331 + 14 NA intron (FBgn0005775, intron 4 of 7) protein_coding-intron (FBgn0005775, intron 1 of 4) 13492 FBgn0035584 FBgn0035584 FBtr0073374 CG17030 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1208 chr2L 8806371 8806470 + 14 NA Intergenic Intergenic -2980 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12694 chr3R 27184846 27185025 + 14 NA exon (FBgn0085376, exon 10 of 17) protein_coding-exon (FBgn0085376, exon 10 of 17) -13214 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6790 chr3L 1105373 1105463 + 14 NA Intergenic Intergenic -4329 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_778 chr2L 5570052 5570176 + 14 NA Intergenic Intergenic 4495 FBgn0041719 FBgn0041719 FBtr0079108 snRNA:U4:25F snRNA Nup98-S2-pascual-garcia2017_R1_peak_3019 chr2L 19328922 19329108 + 14 NA Intergenic Intergenic 28709 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11553 chr3R 21921209 21921332 + 14 NA intron (FBgn0039411, intron 2 of 10) protein_coding-intron (FBgn0039411, intron 2 of 10) 3163 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8410 chr3L 17590091 17590246 + 14 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) 22257 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6132 chr2R 19652129 19652205 + 14 NA intron (FBgn0034903, intron 7 of 13) protein_coding-intron (FBgn0034903, intron 7 of 13) 11903 FBgn0034902 FBgn0034902 FBtr0072091 CG5532 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9274 chr3R 2829498 2829668 + 14 NA Intergenic Intergenic -48474 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13521 chrX 3906815 3906923 + 14 NA Intergenic Intergenic -11229 FBgn0262990 FBgn0262990 FBtr0306828 CR43298 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12956 chr4 704702 704836 + 14 NA intron (FBgn0039920, intron 2 of 2) protein_coding-intron (FBgn0039920, intron 1 of 1) 11906 FBgn0026199 FBgn0026199 FBtr0089092 myo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1749 chr2L 12962591 12962754 + 14 NA Intergenic Intergenic -4077 FBgn0032462 FBgn0032462 FBtr0273445 CG16800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12830 chr3RHet 302955 303125 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2285 chr2L 15534628 15534816 + 14 NA Intergenic Intergenic 12284 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2992 chr2L 19259673 19259898 + 14 NA exon (FBgn0051797, exon 2 of 2) protein_coding-exon (FBgn0051797, exon 2 of 2) 3108 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9793 chr3R 7090217 7090385 + 14 NA Intergenic Intergenic -8456 FBgn0262972 FBgn0262972 FBtr0306728 CR43283 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7636 chr3L 11063517 11063796 + 14 NA promoter-TSS (FBgn0263241) protein_coding-promoter-TSS (FBgn0263241) 30 FBgn0263241 FBgn0263241 FBtr0076204 Mocs1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13189 chrU 1966009 1966158 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3234 chr2L 20532064 20532212 + 14 NA Intergenic Intergenic -30286 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4406 chr2R 5223948 5224156 + 14 NA intron (FBgn0033403, intron 2 of 3) protein_coding-intron (FBgn0033403, intron 2 of 3) -8802 FBgn0033404 FBgn0033404 FBtr0088503 Or45a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7698 chr3L 11856515 11856641 + 14 NA promoter-TSS (FBgn0085449) protein_coding-promoter-TSS (FBgn0085449) -31 FBgn0085449 FBgn0085449 FBtr0330129 CG34420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2404 chr2L 16065509 16065623 + 14 NA intron (FBgn0013433, intron 2 of 7) protein_coding-intron (FBgn0013433, intron 2 of 7) 15571 FBgn0013433 FBgn0013433 FBtr0080806 beat-Ia protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12107 chr3R 24275689 24275778 + 14 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) 31803 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12232 chr3R 24762612 24762943 + 14 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 14011 FBgn0039616 FBgn0039616 FBtr0308601 CG11828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1424 chr2L 10183004 10183196 + 14 NA exon (FBgn0028675, exon 23 of 24) protein_coding-exon (FBgn0028675, exon 23 of 24) 8396 FBgn0051874 FBgn0051874 FBtr0079964 CG31874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13063 chrU 85286 85367 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9784 chr3R 6964911 6965075 + 14 NA exon (FBgn0037862, exon 1 of 1) protein_coding-exon (FBgn0037862, exon 1 of 1) 2094 FBgn0037862 FBgn0037862 FBtr0082336 CG4706 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10985 chr3R 15662551 15662709 + 14 NA promoter-TSS (FBgn0014135) protein_coding-promoter-TSS (FBgn0014135) -91 FBgn0014135 FBgn0014135 FBtr0300123 bnl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7893 chr3L 13284345 13284437 + 14 NA TTS (FBgn0264513) ncRNA-TTS (FBgn0264513) 479 FBgn0264513 FBgn0264513 FBtr0333130 CR43912 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8852 chr3LHet 538148 538355 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8358 chr3L 17242384 17242536 + 14 NA intron (FBgn0264462, intron 1 of 1) ncRNA-intron (FBgn0264462, intron 1 of 1) 3478 FBgn0264462 FBgn0264462 FBtr0332783 CR43870 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10549 chr3R 12711162 12711260 + 14 NA intron (FBgn0263610, intron 3 of 7) ncRNA-intron (FBgn0263610, intron 2 of 6) -6921 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_641 chr2L 4432268 4432484 + 14 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -1532 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5055 chr2R 10327520 10327679 + 14 NA intron (FBgn0261613, intron 1 of 5) protein_coding-intron (FBgn0261613, intron 1 of 5) 4195 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1798 chr2L 13414031 13414150 + 14 NA TTS (FBgn0032522) protein_coding-TTS (FBgn0032522) 485 FBgn0032523 FBgn0032523 FBtr0080520 CG16956 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7683 chr3L 11745696 11745750 + 14 NA TTS (FBgn0041231) protein_coding-TTS (FBgn0041231) 1318 FBgn0041231 FBgn0041231 FBtr0076118 Gr68a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12776 chr3R 27647626 27647785 + 14 NA intron (FBgn0039883, intron 2 of 10) protein_coding-intron (FBgn0039883, intron 2 of 7) -3861 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7885 chr3L 13240010 13240208 + 14 NA exon (FBgn0052119, exon 2 of 2) protein_coding-exon (FBgn0052119, exon 2 of 2) 1693 FBgn0052119 FBgn0052119 FBtr0075867 CG32119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5792 chr2R 16939153 16939249 + 14 NA exon (FBgn0003391, exon 2 of 2) protein_coding-exon (FBgn0003391, exon 2 of 2) 5463 FBgn0003391 FBgn0003391 FBtr0071546 shg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3638 chr2L 22189792 22189975 + 14 NA exon (FBgn0259683, exon 6 of 7) protein_coding-exon (FBgn0259683, exon 6 of 7) 14468 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5215 chr2R 11729242 11729419 + 14 NA TTS (FBgn0034045) protein_coding-TTS (FBgn0034045) 5535 FBgn0034045 FBgn0034045 FBtr0308817 CG8249 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11031 chr3R 15908884 15909025 + 14 NA promoter-TSS (FBgn0003249) protein_coding-promoter-TSS (FBgn0003249) -782 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6441 chr2RHet 1112779 1112833 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2854 chr2L 18164607 18164661 + 14 NA intron (FBgn0261804, intron 13 of 14) protein_coding-intron (FBgn0261804, intron 13 of 14) -5948 FBgn0032671 FBgn0032671 FBtr0081062 CG7200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12618 chr3R 26871852 26871906 + 14 NA exon (FBgn0010015, exon 13 of 13) protein_coding-exon (FBgn0010015, exon 13 of 13) -1052 FBgn0053920 FBgn0053920 FBtr0091924 CG33920 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5899 chr2R 17688774 17688864 + 14 NA promoter-TSS (FBgn0034661) protein_coding-promoter-TSS (FBgn0034661) -414 FBgn0034661 FBgn0034661 FBtr0071743 CG4386 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7245 chr3L 6933650 6933760 + 14 NA Intergenic Intergenic -2251 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9665 chr3R 6070754 6070808 + 14 NA exon (FBgn0261928, exon 8 of 10) protein_coding-exon (FBgn0261928, exon 8 of 10) -6460 FBgn0037801 FBgn0037801 FBtr0082225 CG3999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_937 chr2L 6888396 6888576 + 14 NA intron (FBgn0031866, intron 1 of 12) protein_coding-intron (FBgn0031866, intron 1 of 12) 13586 FBgn0031866 FBgn0031866 FBtr0079344 neuroligin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8347 chr3L 17175892 17176068 + 14 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 16017 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11281 chr3R 17951824 17951878 + 14 NA exon (FBgn0259736, exon 2 of 12) protein_coding-exon (FBgn0259736, exon 2 of 12) -5944 FBgn0051423 FBgn0051423 FBtr0084248 Ir94c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7538 chr3L 10115161 10115257 + 14 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -21228 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8683 chr3L 22245548 22245702 + 14 NA Intergenic Intergenic 10370 FBgn0028500 FBgn0028500 FBtr0078512 Rich protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7729 chr3L 12063240 12063526 + 14 NA exon (FBgn0250876, exon 8 of 12) protein_coding-exon (FBgn0250876, exon 8 of 12) -5424 FBgn0041096 FBgn0041096 FBtr0334109 rols protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2963 chr2L 19087422 19087560 + 14 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -8463 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12964 chr4 738398 738538 + 14 NA exon (FBgn0005558, exon 6 of 8) protein_coding-exon (FBgn0005558, exon 6 of 8) -6562 FBgn0005666 FBgn0005666 FBtr0301341 bt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4015 chr2R 1706048 1706277 + 14 NA intron (FBgn0085414, intron 1 of 9) protein_coding-intron (FBgn0085414, intron 1 of 9) 13943 FBgn0085414 FBgn0085414 FBtr0300553 dpr12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2172 chr2L 15137296 15137478 + 14 NA Intergenic Intergenic -4998 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_9987 chr3R 8680373 8680620 + 14 NA TTS (FBgn0038088) protein_coding-TTS (FBgn0038088) 4443 FBgn0038088 FBgn0038088 FBtr0082686 CG10126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_69 chr2L 751940 752091 + 14 NA promoter-TSS (FBgn0031275) protein_coding-promoter-TSS (FBgn0031275) 1406 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9633 chr3R 5792219 5792470 + 14 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 19438 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7241 chr3L 6898615 6898808 + 14 NA Intergenic Intergenic 8353 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6525 chr2RHet 1889220 1889475 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6920 chr3L 2300051 2300252 + 14 NA exon (FBgn0264002, exon 4 of 4) protein_coding-exon (FBgn0264002, exon 4 of 4) 17268 FBgn0264002 FBgn0264002 FBtr0330358 DmsR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3826 chr2L 22834715 22834794 + 14 NA exon (FBgn0002566, exon 12 of 12) protein_coding-exon (FBgn0002566, exon 12 of 12) 8454 FBgn0058005 FBgn0058005 FBtr0308291 CG40005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3710 chr2L 22365818 22365950 + 14 NA exon (FBgn0039972, exon 4 of 7) protein_coding-exon (FBgn0039972, exon 4 of 7) 11529 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8724 chr3L 23337933 23338061 + 14 NA intron (FBgn0052230, intron 3 of 3) protein_coding-intron (FBgn0052230, intron 3 of 3) 5571 FBgn0052230 FBgn0052230 FBtr0070041 CG32230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_817 chr2L 5809384 5809491 + 14 NA TTS (FBgn0031741) protein_coding-TTS (FBgn0031741) -2137 FBgn0262999 FBgn0262999 FBtr0306842 CG43307 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7665 chr3L 11505655 11505739 + 14 NA exon (FBgn0003373, exon 2 of 2) protein_coding-exon (FBgn0003373, exon 2 of 2) 376 FBgn0003373 FBgn0003373 FBtr0076096 Sgs3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13737 chrX 13909471 13909562 + 14 NA promoter-TSS (FBgn0011976) tRNA-promoter-TSS (FBgn0011976) 38 FBgn0011976 FBgn0011976 FBtr0073859 tRNA:S4:12Eb tRNA Nup98-S2-pascual-garcia2017_R1_peak_5170 chr2R 11296157 11296279 + 14 NA promoter-TSS (FBgn0014865) protein_coding-promoter-TSS (FBgn0014865) -133 FBgn0014865 FBgn0014865 FBtr0087386 Mtk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5436 chr2R 13847922 13848035 + 14 NA Intergenic Intergenic -3903 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5631 chr2R 15603059 15603273 + 14 NA promoter-TSS (FBgn0050215) tRNA-promoter-TSS (FBgn0050215) 96 FBgn0050215 FBgn0050215 FBtr0086330 tRNA:CR30215 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4397 chr2R 5162474 5162528 + 14 NA promoter-TSS (FBgn0020621) protein_coding-promoter-TSS (FBgn0020621) 10101 FBgn0020621 FBgn0020621 FBtr0302603 Pkn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8763 chr3L 23647935 23648136 + 14 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -60356 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4967 chr2R 9563942 9564131 + 14 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 8795 FBgn0033864 FBgn0033864 FBtr0087627 CG18368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4456 chr2R 5626574 5626628 + 14 NA intron (FBgn0259678, intron 1 of 8) protein_coding-intron (FBgn0259678, intron 1 of 7) 9022 FBgn0259678 FBgn0259678 FBtr0299929 sqa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10476 chr3R 12318971 12319154 + 14 NA intron (FBgn0038439, intron 1 of 11) protein_coding-intron (FBgn0038439, intron 1 of 11) 2079 FBgn0038439 FBgn0038439 FBtr0301702 Cad89D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3434 chr2L 21716431 21716883 + 14 NA exon (FBgn0051619, exon 13 of 19) protein_coding-exon (FBgn0051619, exon 13 of 19) 32475 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6246 chr2R 20723930 20724305 + 14 NA Intergenic Intergenic -12382 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2520 chr2L 16774490 16774650 + 14 NA exon (FBgn0264695, exon 8 of 18) protein_coding-exon (FBgn0264695, exon 8 of 18) 6793 FBgn0264695 FBgn0264695 FBtr0307495 Mhc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10673 chr3R 13595885 13596078 + 14 NA intron (FBgn0262562, intron 16 of 16) protein_coding-intron (FBgn0262562, intron 16 of 16) -7778 FBgn0038542 FBgn0038542 FBtr0083532 TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8142 chr3L 15411961 15412075 + 14 NA Intergenic Intergenic 11086 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_759 chr2L 5435090 5435179 + 14 NA promoter-TSS (FBgn0263868) ncRNA-promoter-TSS (FBgn0263868) -787 FBgn0263868 FBgn0263868 FBtr0329837 CR43715 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11704 chr3R 22538118 22538228 + 14 NA intron (FBgn0023179, intron 1 of 11) protein_coding-intron (FBgn0023179, intron 1 of 11) 1708 FBgn0023179 FBgn0023179 FBtr0085048 amon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3626 chr2L 22142888 22143045 + 14 NA exon (FBgn0261802, exon 4 of 8) protein_coding-exon (FBgn0261802, exon 4 of 8) 8633 FBgn0261802 FBgn0261802 FBtr0303274 CG42748 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3531 chr2L 21954388 21954749 + 14 NA Intergenic Intergenic 38207 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6855 chr3L 1686461 1686665 + 14 NA intron (FBgn0035260, intron 1 of 3) protein_coding-intron (FBgn0035260, intron 1 of 3) -2246 FBgn0035260 FBgn0035260 FBtr0303103 CG7991 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9159 chr3R 2136107 2136292 + 14 NA exon (FBgn0051560, exon 2 of 2) protein_coding-exon (FBgn0051560, exon 2 of 2) 481 FBgn0051560 FBgn0051560 FBtr0078609 CG31560 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3333 chr2L 21065956 21066133 + 14 NA intron (FBgn0032910, intron 1 of 7) protein_coding-intron (FBgn0032910, intron 1 of 7) 4237 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10520 chr3R 12553844 12553904 + 14 NA intron (FBgn0003944, intron 1 of 3) protein_coding-intron (FBgn0003944, intron 1 of 3) 6474 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3714 chr2L 22390954 22391102 + 14 NA Intergenic Intergenic 36673 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5589 chr2R 15228002 15228162 + 14 NA intron (FBgn0050127, intron 2 of 6) protein_coding-intron (FBgn0050127, intron 3 of 7) -1232 FBgn0034435 FBgn0034435 FBtr0304055 CG9975 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13104 chrU 228804 228874 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4127 chr2R 3210690 3210779 + 14 NA exon (FBgn0033159, exon 20 of 24) protein_coding-exon (FBgn0033159, exon 20 of 24) 11821 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7132 chr3L 5986800 5987042 + 14 NA Intergenic Intergenic -3387 FBgn0052406 FBgn0052406 FBtr0077037 CG32406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7820 chr3L 12680361 12680750 + 14 NA Intergenic Intergenic -6184 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11846 chr3R 23250682 23250873 + 14 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 12427 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4087 chr2R 2795479 2795654 + 14 NA intron (FBgn0050158, intron 3 of 7) protein_coding-intron (FBgn0050158, intron 3 of 7) -15385 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5798 chr2R 17001630 17001754 + 14 NA intron (FBgn0015721, intron 1 of 5) protein_coding-intron (FBgn0015721, intron 1 of 5) -4207 FBgn0034588 FBgn0034588 FBtr0071567 CG9394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12068 chr3R 24125628 24125788 + 14 NA Intergenic Intergenic 4619 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5110 chr2R 10820387 10820461 + 14 NA promoter-TSS (FBgn0040747) protein_coding-promoter-TSS (FBgn0040747) -596 FBgn0040747 FBgn0040747 FBtr0087406 CG12853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13200 chrU 2073722 2073841 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11198 chr3R 17217079 17217209 + 14 NA TTS (FBgn0004862) protein_coding-TTS (FBgn0004862) 2539 FBgn0004862 FBgn0004862 FBtr0084087 bap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_726 chr2L 5159033 5159328 + 14 NA TTS (FBgn0261836) protein_coding-TTS (FBgn0261836) 7431 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11857 chr3R 23274914 23275070 + 14 NA Intergenic Intergenic 8958 FBgn0263401 FBgn0263401 FBtr0309178 CG43447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11665 chr3R 22434727 22434839 + 14 NA Intergenic Intergenic -10062 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11381 chr3R 19460516 19460717 + 14 NA intron (FBgn0051145, intron 5 of 15) protein_coding-intron (FBgn0051145, intron 4 of 13) -29407 FBgn0039094 FBgn0039094 FBtr0084481 CG10184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7841 chr3L 12885083 12885192 + 14 NA promoter-TSS (FBgn0036323) protein_coding-promoter-TSS (FBgn0036323) -621 FBgn0036323 FBgn0036323 FBtr0075870 CG14118 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1442 chr2L 10586745 10586916 + 14 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -5168 FBgn0085190 FBgn0085190 FBtr0112352 CG34161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_478 chr2L 3220382 3220436 + 14 NA Intergenic Intergenic -20789 FBgn0085422 FBgn0085422 FBtr0112637 CG34393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12363 chr3R 25399773 25399874 + 14 NA Intergenic Intergenic 13999 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8227 chr3L 16244261 16244414 + 14 NA exon (FBgn0036583, exon 1 of 1) protein_coding-exon (FBgn0036583, exon 1 of 1) 1118 FBgn0036583 FBgn0036583 FBtr0075482 CG13055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9898 chr3R 8010243 8010512 + 14 NA Intergenic Intergenic 10356 FBgn0037994 FBgn0037994 FBtr0082546 CG4810 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9372 chr3R 3549573 3549770 + 14 NA exon (FBgn0037512, exon 2 of 2) protein_coding-exon (FBgn0037512, exon 2 of 2) 1532 FBgn0037512 FBgn0037512 FBtr0081738 CG2616 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10316 chr3R 11378191 11378268 + 14 NA exon (FBgn0038350, exon 2 of 7) protein_coding-exon (FBgn0038350, exon 2 of 7) 265 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11790 chr3R 23043674 23043831 + 14 NA promoter-TSS (FBgn0054006) protein_coding-promoter-TSS (FBgn0054006) -56 FBgn0054006 FBgn0054006 FBtr0303711 CG34006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5532 chr2R 14673925 14674115 + 14 NA intron (FBgn0034391, intron 1 of 5) protein_coding-intron (FBgn0034391, intron 1 of 5) 3214 FBgn0034391 FBgn0034391 FBtr0086613 CG15080 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2637 chr2L 17221124 17221276 + 14 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -18159 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5105 chr2R 10703791 10703845 + 14 NA Intergenic Intergenic 3674 FBgn0033969 FBgn0033969 FBtr0087464 CG10202 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11376 chr3R 19301783 19301837 + 14 NA Intergenic Intergenic -5777 FBgn0051225 FBgn0051225 FBtr0290293 Ir94f protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12540 chr3R 26491011 26491145 + 14 NA Intergenic Intergenic 15395 FBgn0085462 FBgn0085462 FBtr0304711 CG34433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4242 chr2R 4106484 4106543 + 14 NA exon (FBgn0053087, exon 16 of 23) protein_coding-exon (FBgn0053087, exon 16 of 23) 9719 FBgn0085246 FBgn0085246 FBtr0112410 CG34217 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12628 chr3R 26928120 26928290 + 14 NA Intergenic Intergenic -1314 FBgn0039817 FBgn0039817 FBtr0290201 CG15553 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8335 chr3L 17131266 17131465 + 14 NA intron (FBgn0260943, intron 6 of 14) protein_coding-intron (FBgn0260943, intron 6 of 14) -28598 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_410 chr2L 2606141 2606197 + 14 NA Intergenic Intergenic -3977 FBgn0031440 FBgn0031440 FBtr0114513 CG15395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6309 chr2RHet 101918 102199 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6027 chr2R 18875330 18875508 + 14 NA Intergenic Intergenic -1568 FBgn0034807 FBgn0034807 FBtr0071989 CG9897 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_148 chr2L 1018577 1018692 + 14 NA intron (FBgn0031294, intron 3 of 10) protein_coding-intron (FBgn0031294, intron 3 of 10) 8256 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11373 chr3R 19269152 19269340 + 14 NA intron (FBgn0039078, intron 2 of 3) protein_coding-intron (FBgn0039078, intron 2 of 3) -12050 FBgn0039078 FBgn0039078 FBtr0310575 CG4374 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5871 chr2R 17466567 17466809 + 14 NA Intergenic Intergenic -3148 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7955 chr3L 13730563 13730733 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 65852 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_626 chr2L 4349098 4349227 + 14 NA Intergenic Intergenic -3813 FBgn0031596 FBgn0031596 FBtr0077428 CG15429 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9856 chr3R 7626019 7626073 + 14 NA exon (FBgn0051116, exon 9 of 16) protein_coding-exon (FBgn0051116, exon 9 of 16) -3889 FBgn0025802 FBgn0025802 FBtr0082529 Sbf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10080 chr3R 9352771 9352975 + 14 NA Intergenic Intergenic 2205 FBgn0261846 FBgn0261846 FBtr0307889 CG42778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7680 chr3L 11713306 11713418 + 14 NA promoter-TSS (FBgn0036199) protein_coding-promoter-TSS (FBgn0036199) -672 FBgn0036199 FBgn0036199 FBtr0076114 Bmcp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5876 chr2R 17470645 17470722 + 14 NA promoter-TSS (FBgn0050222) protein_coding-promoter-TSS (FBgn0050222) -314 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2804 chr2L 17972527 17972663 + 14 NA exon (FBgn0032656, exon 4 of 4) protein_coding-exon (FBgn0032656, exon 4 of 4) 9181 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4173 chr2R 3432647 3432702 + 14 NA promoter-TSS (FBgn0033192) protein_coding-promoter-TSS (FBgn0033192) -493 FBgn0033192 FBgn0033192 FBtr0088909 Corin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13341 chrUextra 3933295 3933349 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12789 chr3R 27689826 27689974 + 14 NA intron (FBgn0011224, intron 13 of 16) protein_coding-intron (FBgn0011224, intron 10 of 13) 38334 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4508 chr2R 6056180 6056364 + 14 NA intron (FBgn0033494, intron 1 of 16) protein_coding-intron (FBgn0033494, intron 1 of 16) -10183 FBgn0033495 FBgn0033495 FBtr0088370 CG12214 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5730 chr2R 16351644 16351698 + 14 NA intron (FBgn0086604, intron 5 of 19) protein_coding-intron (FBgn0086604, intron 6 of 15) -39449 FBgn0034509 FBgn0034509 FBtr0113099 Obp57c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7388 chr3L 8319988 8320084 + 14 NA exon (FBgn0250833, exon 3 of 3) protein_coding-exon (FBgn0250833, exon 3 of 3) 1077 FBgn0250833 FBgn0250833 FBtr0112767 CG34461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8766 chr3L 23659619 23659708 + 14 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -48728 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1797 chr2L 13411389 13411449 + 14 NA TTS (FBgn0032521) protein_coding-TTS (FBgn0032521) 197 FBgn0003983 FBgn0003983 FBtr0080521 Vm34Ca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5188 chr2R 11446932 11447029 + 14 NA promoter-TSS (FBgn0034031) protein_coding-promoter-TSS (FBgn0034031) 2547 FBgn0034031 FBgn0034031 FBtr0306572 CG12963 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9863 chr3R 7692686 7692805 + 14 NA intron (FBgn0037956, intron 1 of 3) protein_coding-intron (FBgn0037956, intron 1 of 2) 2438 FBgn0037956 FBgn0037956 FBtr0299594 CG6959 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11210 chr3R 17273474 17273591 + 14 NA Intergenic Intergenic -1490 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9021 chr3R 959356 959449 + 14 NA Intergenic Intergenic 3893 FBgn0040684 FBgn0040684 FBtr0078843 CG12589 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1876 chr2L 14051771 14051825 + 14 NA intron (FBgn0028875, intron 2 of 13) protein_coding-intron (FBgn0028875, intron 2 of 13) 4216 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12835 chr3RHet 433336 433497 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11212 chr3R 17282775 17282829 + 14 NA Intergenic Intergenic -8621 FBgn0263407 FBgn0263407 FBtr0309186 CR43453 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10971 chr3R 15588224 15588380 + 14 NA intron (FBgn0024963, intron 7 of 11) protein_coding-intron (FBgn0024963, intron 7 of 11) 10645 FBgn0038730 FBgn0038730 FBtr0083798 CG6300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11873 chr3R 23339512 23339629 + 14 NA Intergenic Intergenic 3409 FBgn0039522 FBgn0039522 FBtr0085212 CG13972 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3603 chr2L 22074566 22074646 + 14 NA Intergenic Intergenic 3453 FBgn0051702 FBgn0051702 FBtr0085934 CG31702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8 chr2L 34745 34851 + 14 NA exon (FBgn0051973, exon 5 of 13) protein_coding-exon (FBgn0051973, exon 5 of 13) -9643 FBgn0031209 FBgn0031209 FBtr0113008 Ir21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4591 chr2R 6604526 6604871 + 14 NA exon (FBgn0024836, exon 3 of 4) protein_coding-exon (FBgn0024836, exon 3 of 4) -8077 FBgn0033542 FBgn0033542 FBtr0088215 CG12309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_559 chr2L 3826358 3826656 + 14 NA exon (FBgn0003430, exon 1 of 1) protein_coding-exon (FBgn0003430, exon 1 of 1) 827 FBgn0003430 FBgn0003430 FBtr0077499 slp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7898 chr3L 13328845 13329042 + 14 NA Intergenic Intergenic 6708 FBgn0040814 FBgn0040814 FBtr0075837 CG14113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11985 chr3R 23844939 23845202 + 14 NA Intergenic Intergenic -7264 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11393 chr3R 19650542 19650612 + 14 NA TTS (FBgn0262974) protein_coding-TTS (FBgn0262974) 1052 FBgn0262974 FBgn0262974 FBtr0306736 CG43285 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5481 chr2R 14151379 14151433 + 14 NA Intergenic Intergenic 13292 FBgn0003022 FBgn0003022 FBtr0086768 Ote protein_coding Nup98-S2-pascual-garcia2017_R1_peak_564 chr2L 3853402 3853546 + 14 NA Intergenic Intergenic -9207 FBgn0031574 FBgn0031574 FBtr0077502 CG3964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8839 chr3L 24367866 24367920 + 14 NA intron (FBgn0259697, intron 3 of 5) protein_coding-intron (FBgn0259697, intron 3 of 5) 49926 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5879 chr2R 17474430 17474654 + 14 NA Intergenic Intergenic -3349 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11012 chr3R 15797707 15797863 + 14 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) -1450 FBgn0051213 FBgn0051213 FBtr0083824 CG31213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8692 chr3L 22331187 22331355 + 14 NA intron (FBgn0004449, intron 2 of 11) protein_coding-intron (FBgn0004449, intron 2 of 8) 8393 FBgn0052450 FBgn0052450 FBtr0078501 CG32450 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_592 chr2L 4144622 4144696 + 14 NA Intergenic Intergenic -4620 FBgn0031585 FBgn0031585 FBtr0077468 CG2955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1771 chr2L 13154480 13154632 + 14 NA Intergenic Intergenic -4254 FBgn0028410 FBgn0028410 FBtr0080432 Pk34A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12237 chr3R 24782078 24782241 + 14 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 13917 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1464 chr2L 10761952 10762191 + 14 NA exon (FBgn0027550, exon 2 of 6) protein_coding-exon (FBgn0027550, exon 2 of 6) 955 FBgn0027550 FBgn0027550 FBtr0080114 CG6495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5303 chr2R 12450145 12450292 + 14 NA intron (FBgn0034136, intron 2 of 7) protein_coding-intron (FBgn0034136, intron 2 of 7) 2545 FBgn0034136 FBgn0034136 FBtr0330002 DAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7842 chr3L 12886486 12886735 + 14 NA exon (FBgn0036323, exon 2 of 2) protein_coding-exon (FBgn0036323, exon 2 of 2) 852 FBgn0036323 FBgn0036323 FBtr0075870 CG14118 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10641 chr3R 13411853 13412057 + 14 NA Intergenic Intergenic -8153 FBgn0038523 FBgn0038523 FBtr0083460 CG7587 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1408 chr2L 10034402 10034598 + 14 NA intron (FBgn0027600, intron 2 of 5) protein_coding-intron (FBgn0027600, intron 2 of 5) 1806 FBgn0027600 FBgn0027600 FBtr0079934 obst-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4607 chr2R 6815002 6815056 + 14 NA Intergenic Intergenic 14177 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7289 chr3L 7196596 7196762 + 14 NA Intergenic Intergenic -13662 FBgn0263218 FBgn0263218 FBtr0299546 Dscam2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8967 chr3R 546868 546931 + 14 NA exon (FBgn0027570, exon 6 of 9) protein_coding-exon (FBgn0027570, exon 6 of 9) -6981 FBgn0037270 FBgn0037270 FBtr0078892 CG9769 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11530 chr3R 21855498 21855552 + 14 NA promoter-TSS (FBgn0002631) protein_coding-promoter-TSS (FBgn0002631) -68 FBgn0002631 FBgn0002631 FBtr0084979 HLHm5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2153 chr2L 15048155 15048412 + 14 NA exon (FBgn0000317, exon 7 of 12) protein_coding-exon (FBgn0000317, exon 7 of 12) 8787 FBgn0004837 FBgn0004837 FBtr0080700 Su(H) protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10123 chr3R 9673721 9673881 + 14 NA Intergenic Intergenic 7375 FBgn0038186 FBgn0038186 FBtr0082881 CG14362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8884 chr3LHet 1134846 1135044 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2566 chr2L 16987870 16987960 + 14 NA intron (FBgn0053179, intron 4 of 6) protein_coding-intron (FBgn0053179, intron 4 of 6) 2937 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1953 chr2L 14379509 14379681 + 14 NA intron (FBgn0020258, intron 4 of 6) protein_coding-intron (FBgn0020258, intron 4 of 6) 1575 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2557 chr2L 16957618 16957719 + 14 NA Intergenic Intergenic -12294 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6876 chr3L 1900423 1900477 + 14 NA TTS (FBgn0035290) protein_coding-TTS (FBgn0035290) 9747 FBgn0035290 FBgn0035290 FBtr0310545 CG1887 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11896 chr3R 23454810 23455159 + 14 NA intron (FBgn0039530, intron 2 of 10) protein_coding-intron (FBgn0039530, intron 2 of 10) -3253 FBgn0039529 FBgn0039529 FBtr0085200 CG5612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2731 chr2L 17708068 17708246 + 14 NA exon (FBgn0015609, exon 11 of 22) protein_coding-exon (FBgn0015609, exon 11 of 22) 3476 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11511 chr3R 21781341 21781587 + 14 NA exon (FBgn0039396, exon 1 of 7) protein_coding-exon (FBgn0039396, exon 1 of 7) 528 FBgn0039396 FBgn0039396 FBtr0304043 CcapR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13798 chrX 18137414 18137625 + 14 NA promoter-TSS (FBgn0030904) protein_coding-promoter-TSS (FBgn0030904) -202 FBgn0030904 FBgn0030904 FBtr0300182 upd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6326 chr2RHet 163677 163780 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11879 chr3R 23358887 23359254 + 14 NA exon (FBgn0039523, exon 4 of 4) protein_coding-exon (FBgn0039523, exon 4 of 4) -9149 FBgn0046887 FBgn0046887 FBtr0085186 Gr98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1852 chr2L 13933154 13933317 + 14 NA exon (FBgn0032538, exon 2 of 2) protein_coding-exon (FBgn0032538, exon 2 of 2) 1455 FBgn0032538 FBgn0032538 FBtr0080558 CG16885 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3493 chr2L 21859488 21860042 + 14 NA Intergenic Intergenic 31172 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3855 chr2L 22924992 22925055 + 14 NA Intergenic Intergenic -6463 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3685 chr2L 22320276 22320421 + 14 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -20274 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10039 chr3R 9064057 9064165 + 14 NA intron (FBgn0000024, intron 6 of 10) protein_coding-intron (FBgn0000024, intron 5 of 9) -17811 FBgn0038127 FBgn0038127 FBtr0082781 CG8476 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_507 chr2L 3446377 3446507 + 14 NA exon (FBgn0031533, exon 2 of 3) protein_coding-exon (FBgn0031533, exon 2 of 3) 445 FBgn0031533 FBgn0031533 FBtr0077516 CG2772 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5259 chr2R 12129184 12129345 + 14 NA exon (FBgn0034099, exon 1 of 2) protein_coding-exon (FBgn0034099, exon 1 of 2) 175 FBgn0034099 FBgn0034099 FBtr0087188 CG15708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1896 chr2L 14166861 14167093 + 14 NA exon (FBgn0263038, exon 3 of 6) protein_coding-exon (FBgn0263038, exon 3 of 6) -3755 FBgn0263037 FBgn0263037 FBtr0306928 CG43332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4067 chr2R 2661738 2661949 + 14 NA intron (FBgn0085421, intron 4 of 19) protein_coding-intron (FBgn0085421, intron 1 of 16) -4580 FBgn0085421 FBgn0085421 FBtr0329851 Epac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2180 chr2L 15167909 15168014 + 14 NA intron (FBgn0028888, intron 3 of 5) protein_coding-intron (FBgn0028888, intron 3 of 5) 32448 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1754 chr2L 12992069 12992145 + 14 NA Intergenic Intergenic 8524 FBgn0032465 FBgn0032465 FBtr0080430 CG12404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8494 chr3L 18225101 18225309 + 14 NA Intergenic Intergenic -19983 FBgn0036783 FBgn0036783 FBtr0075129 CheA75a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7308 chr3L 7404691 7404775 + 14 NA Intergenic Intergenic 5310 FBgn0063083 FBgn0063083 FBtr0091959 pncr015:3L ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10777 chr3R 14282504 14282708 + 14 NA intron (FBgn0004652, intron 2 of 7) protein_coding-intron (FBgn0004652, intron 2 of 7) -45253 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2643 chr2L 17251917 17251985 + 14 NA intron (FBgn0032629, intron 1 of 6) protein_coding-intron (FBgn0032629, intron 1 of 5) 8781 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_427 chr2L 2703568 2703681 + 14 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) -7187 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2725 chr2L 17673880 17674061 + 14 NA intron (FBgn0015609, intron 12 of 22) protein_coding-intron (FBgn0015609, intron 11 of 21) -30711 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10723 chr3R 13889714 13889768 + 14 NA Intergenic Intergenic -14658 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5814 chr2R 17119106 17119222 + 14 NA intron (FBgn0034606, intron 2 of 7) protein_coding-intron (FBgn0034606, intron 2 of 7) -13880 FBgn0034605 FBgn0034605 FBtr0110814 CG15661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10141 chr3R 9768098 9768277 + 14 NA exon (FBgn0038188, exon 3 of 3) protein_coding-exon (FBgn0038188, exon 3 of 3) 937 FBgn0038188 FBgn0038188 FBtr0082879 Art9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2609 chr2L 17111202 17111314 + 14 NA Intergenic Intergenic 14703 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12389 chr3R 25487509 25487643 + 14 NA Intergenic Intergenic -1870 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13032 chrM 696 750 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10579 chr3R 12875088 12875248 + 14 NA Intergenic Intergenic -4561 FBgn0020493 FBgn0020493 FBtr0083394 Dad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5993 chr2R 18598785 18598839 + 14 NA exon (FBgn0050275, exon 10 of 14) protein_coding-exon (FBgn0050275, exon 10 of 14) -1394 FBgn0050268 FBgn0050268 FBtr0273311 CG30268 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7666 chr3L 11512857 11512958 + 14 NA TTS (FBgn0036168) protein_coding-TTS (FBgn0036168) 1017 FBgn0036169 FBgn0036169 FBtr0100588 Fuca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8331 chr3L 17087912 17088010 + 14 NA intron (FBgn0260943, intron 7 of 14) protein_coding-intron (FBgn0260943, intron 7 of 14) 39248 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6165 chr2R 20116747 20116885 + 14 NA exon (FBgn0050419, exon 1 of 2) protein_coding-exon (FBgn0050419, exon 1 of 2) 495 FBgn0050419 FBgn0050419 FBtr0072275 CG30419 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9337 chr3R 3189162 3189262 + 14 NA TTS (FBgn0004174) protein_coding-TTS (FBgn0004174) 283 FBgn0004175 FBgn0004175 FBtr0081588 Mst84Dd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7969 chr3L 13796326 13796491 + 14 NA promoter-TSS (FBgn0264001) protein_coding-promoter-TSS (FBgn0264001) 92 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5594 chr2R 15302335 15302444 + 14 NA promoter-TSS (FBgn0050225) tRNA-promoter-TSS (FBgn0050225) 39 FBgn0050225 FBgn0050225 FBtr0086527 tRNA:CR30225 tRNA Nup98-S2-pascual-garcia2017_R1_peak_8150 chr3L 15480969 15481036 + 14 NA Intergenic Intergenic -2500 FBgn0036497 FBgn0036497 FBtr0075616 ran-like protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2297 chr2L 15579142 15579261 + 14 NA exon (FBgn0028370, exon 3 of 4) protein_coding-exon (FBgn0028370, exon 3 of 4) 26478 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2660 chr2L 17321661 17321838 + 14 NA Intergenic Intergenic -9929 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9480 chr3R 4368720 4368954 + 14 NA Intergenic Intergenic -9493 FBgn0037594 FBgn0037594 FBtr0081872 Or85d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1000 chr2L 7468807 7468986 + 14 NA intron (FBgn0031918, intron 1 of 1) protein_coding-intron (FBgn0031918, intron 1 of 1) -2448 FBgn0031918 FBgn0031918 FBtr0330720 CG6055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6786 chr3L 1099524 1099578 + 14 NA exon (FBgn0004870, exon 1 of 4) protein_coding-exon (FBgn0004870, exon 1 of 4) 1538 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12062 chr3R 24100472 24100618 + 14 NA Intergenic Intergenic -7757 FBgn0085465 FBgn0085465 FBtr0112737 CG34436 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2847 chr2L 18116059 18116263 + 14 NA TTS (FBgn0032665) protein_coding-TTS (FBgn0032665) 1614 FBgn0032665 FBgn0032665 FBtr0081034 CG15152 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1357 chr2L 9561047 9561190 + 14 NA promoter-TSS (FBgn0032129) protein_coding-promoter-TSS (FBgn0032129) -692 FBgn0032129 FBgn0032129 FBtr0113030 jp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13238 chrU 3231468 3231654 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5129 chr2R 10927712 10927766 + 14 NA exon (FBgn0029082, exon 11 of 12) protein_coding-exon (FBgn0029082, exon 11 of 12) 10121 FBgn0263613 FBgn0263613 FBtr0309977 CR43622 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6829 chr3L 1423970 1424080 + 14 NA promoter-TSS (FBgn0035218) protein_coding-promoter-TSS (FBgn0035218) -554 FBgn0035218 FBgn0035218 FBtr0072720 CG9173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12700 chr3R 27193096 27193150 + 14 NA exon (FBgn0085376, exon 16 of 17) protein_coding-exon (FBgn0085376, exon 16 of 17) -5026 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10606 chr3R 13127863 13127934 + 14 NA Intergenic Intergenic 14388 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1861 chr2L 13989838 13989901 + 14 NA intron (FBgn0003255, intron 1 of 9) protein_coding-intron (FBgn0003255, intron 5 of 14) 850 FBgn0003255 FBgn0003255 FBtr0301918 rk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5085 chr2R 10591498 10591594 + 14 NA intron (FBgn0020269, intron 1 of 5) protein_coding-intron (FBgn0020269, intron 1 of 5) 9581 FBgn0020269 FBgn0020269 FBtr0087477 mspo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5409 chr2R 13606875 13607069 + 14 NA promoter-TSS (FBgn0028494) protein_coding-promoter-TSS (FBgn0028494) -2872 FBgn0034263 FBgn0034263 FBtr0086859 CG10934 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10795 chr3R 14347170 14347270 + 14 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 24088 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7476 chr3L 9036851 9037007 + 14 NA exon (FBgn0028789, exon 4 of 5) protein_coding-exon (FBgn0028789, exon 4 of 5) 2000 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5232 chr2R 11832604 11832908 + 14 NA promoter-TSS (FBgn0263576) pre_miRNA-promoter-TSS (FBgn0263576) -636 FBgn0263576 FBgn0263576 FBtr0309737 mir-4919 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8573 chr3L 19676223 19676344 + 14 NA TTS (FBgn0036900) protein_coding-TTS (FBgn0036900) 4170 FBgn0036900 FBgn0036900 FBtr0331859 CG8765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5149 chr2R 11074911 11074965 + 14 NA intron (FBgn0013467, intron 4 of 4) protein_coding-intron (FBgn0013467, intron 2 of 2) 2275 FBgn0262478 FBgn0262478 FBtr0304816 CG43068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12690 chr3R 27179153 27179231 + 14 NA exon (FBgn0085376, exon 6 of 17) protein_coding-exon (FBgn0085376, exon 6 of 17) -18957 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4025 chr2R 1888682 1888824 + 14 NA exon (FBgn0033049, exon 1 of 1) protein_coding-exon (FBgn0033049, exon 1 of 1) 3450 FBgn0033049 FBgn0033049 FBtr0085970 CG14471 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_857 chr2L 6167706 6167855 + 14 NA Intergenic Intergenic 7336 FBgn0031786 FBgn0031786 FBtr0079204 CG13989 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6729 chr3L 609615 609898 + 14 NA Intergenic Intergenic -3187 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1739 chr2L 12916252 12916375 + 14 NA promoter-TSS (FBgn0040509) protein_coding-promoter-TSS (FBgn0040509) -501 FBgn0040509 FBgn0040509 FBtr0080414 ACXB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3662 chr2L 22223796 22223972 + 14 NA Intergenic Intergenic -2267 FBgn0042701 FBgn0042701 FBtr0085952 CR12628 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7382 chr3L 8253799 8253941 + 14 NA exon (FBgn0263219, exon 7 of 32) protein_coding-exon (FBgn0263219, exon 7 of 32) 19639 FBgn0263219 FBgn0263219 FBtr0333590 Dscam4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9560 chr3R 5115224 5115471 + 14 NA Intergenic Intergenic 22593 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3105 chr2L 19832596 19832689 + 14 NA intron (FBgn0263873, intron 1 of 14) protein_coding-intron (FBgn0263873, intron 2 of 15) 16228 FBgn0043021 FBgn0043021 FBtr0081294 snRNA:U5:38ABb snRNA Nup98-S2-pascual-garcia2017_R1_peak_1420 chr2L 10133024 10133118 + 14 NA intron (FBgn0262032, intron 1 of 6) protein_coding-intron (FBgn0262032, intron 1 of 6) 4481 FBgn0262032 FBgn0262032 FBtr0303928 CG42843 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1151 chr2L 8658796 8659001 + 14 NA intron (FBgn0011259, intron 12 of 20) protein_coding-intron (FBgn0011259, intron 12 of 21) -14254 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8983 chr3R 671223 671392 + 14 NA Intergenic Intergenic -7228 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1447 chr2L 10612372 10612433 + 14 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) 27106 FBgn0032271 FBgn0032271 FBtr0080131 CG7329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10838 chr3R 14669273 14669363 + 14 NA intron (FBgn0038653, intron 1 of 3) protein_coding-intron (FBgn0038653, intron 1 of 2) 5628 FBgn0038653 FBgn0038653 FBtr0332809 CG18208 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5214 chr2R 11725947 11726042 + 14 NA Intergenic Intergenic -3434 FBgn0003130 FBgn0003130 FBtr0087311 Poxn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7709 chr3L 11913858 11913982 + 14 NA promoter-TSS (FBgn0036221) protein_coding-promoter-TSS (FBgn0036221) -693 FBgn0036221 FBgn0036221 FBtr0076038 CG11588 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5310 chr2R 12506904 12507005 + 14 NA exon (FBgn0034145, exon 2 of 11) protein_coding-exon (FBgn0034145, exon 2 of 11) 10321 FBgn0034145 FBgn0034145 FBtr0302205 CG5065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4215 chr2R 3909190 3909389 + 14 NA Intergenic Intergenic 6479 FBgn0263572 FBgn0263572 FBtr0309728 mir-4981 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12654 chr3R 27006365 27006531 + 14 NA exon (FBgn0051004, exon 14 of 16) protein_coding-exon (FBgn0051004, exon 14 of 16) -11623 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11013 chr3R 15799723 15799881 + 14 NA exon (FBgn0051213, exon 2 of 7) protein_coding-exon (FBgn0051213, exon 2 of 7) 567 FBgn0051213 FBgn0051213 FBtr0083824 CG31213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10267 chr3R 10986692 10986805 + 14 NA Intergenic Intergenic -13919 FBgn0038293 FBgn0038293 FBtr0083037 CG6904 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7171 chr3L 6267222 6267276 + 14 NA Intergenic Intergenic -1551 FBgn0262787 FBgn0262787 FBtr0305900 CG43168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8253 chr3L 16360101 16360211 + 14 NA exon (FBgn0036619, exon 1 of 1) protein_coding-exon (FBgn0036619, exon 1 of 1) 284 FBgn0036619 FBgn0036619 FBtr0075424 Cpr72Ec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8782 chr3L 23788382 23788437 + 14 NA Intergenic Intergenic 11078 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3504 chr2L 21873773 21873951 + 14 NA Intergenic Intergenic -20365 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_209 chr2L 1328398 1328562 + 14 NA promoter-TSS (FBgn0011294) protein_coding-promoter-TSS (FBgn0011294) -681 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10334 chr3R 11440465 11440655 + 14 NA Intergenic Intergenic -20630 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6098 chr2R 19425351 19425491 + 14 NA TTS (FBgn0050181) protein_coding-TTS (FBgn0050181) 595 FBgn0000241 FBgn0000241 FBtr0072117 bw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4431 chr2R 5402001 5402055 + 14 NA intron (FBgn0259246, intron 7 of 20) protein_coding-intron (FBgn0259246, intron 8 of 21) 10735 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4845 chr2R 8663434 8663732 + 14 NA Intergenic Intergenic -4466 FBgn0003326 FBgn0003326 FBtr0087855 sca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9323 chr3R 3132031 3132085 + 14 NA intron (FBgn0259172, intron 2 of 8) protein_coding-intron (FBgn0259172, intron 2 of 8) 1744 FBgn0260713 FBgn0260713 FBtr0301214 CG42544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9952 chr3R 8432070 8432124 + 14 NA Intergenic Intergenic 21339 FBgn0005671 FBgn0005671 FBtr0301661 Vha55 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6689 chr2RHet 3187682 3187835 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8699 chr3L 22436640 22436759 + 14 NA Intergenic Intergenic -10774 FBgn0037162 FBgn0037162 FBtr0078503 CG11449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_703 chr2L 4867755 4867880 + 14 NA intron (FBgn0051660, intron 3 of 12) protein_coding-intron (FBgn0051660, intron 3 of 13) 14952 FBgn0051660 FBgn0051660 FBtr0304910 pog protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5434 chr2R 13829828 13829996 + 14 NA Intergenic Intergenic 14163 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8798 chr3L 23887592 23887785 + 14 NA intron (FBgn0058470, intron 6 of 12) protein_coding-intron (FBgn0058470, intron 6 of 12) -11446 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10701 chr3R 13739740 13739822 + 14 NA intron (FBgn0053547, intron 2 of 24) protein_coding-intron (FBgn0053547, intron 2 of 26) 2519 FBgn0053547 FBgn0053547 FBtr0305019 Rim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3305 chr2L 20845893 20846158 + 14 NA intron (FBgn0051676, intron 2 of 2) protein_coding-intron (FBgn0051676, intron 2 of 2) -3332 FBgn0032894 FBgn0032894 FBtr0081425 CG14402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7383 chr3L 8266305 8266471 + 14 NA exon (FBgn0263219, exon 19 of 32) protein_coding-exon (FBgn0263219, exon 19 of 32) 13181 FBgn0027569 FBgn0027569 FBtr0332136 cert protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11922 chr3R 23575732 23575896 + 14 NA Intergenic Intergenic 13552 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_912 chr2L 6737620 6737727 + 14 NA exon (FBgn0031854, exon 3 of 4) protein_coding-exon (FBgn0031854, exon 3 of 4) 2503 FBgn0031854 FBgn0031854 FBtr0079305 TTLL3A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8094 chr3L 14906732 14906945 + 14 NA intron (FBgn0259099, intron 1 of 10) protein_coding-intron (FBgn0259099, intron 1 of 10) 9933 FBgn0259099 FBgn0259099 FBtr0330139 DCX-EMAP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12147 chr3R 24417572 24417669 + 14 NA Intergenic Intergenic -1590 FBgn0263388 FBgn0263388 FBtr0309076 CG43440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4769 chr2R 7930759 7930813 + 14 NA TTS (FBgn0004463) protein_coding-TTS (FBgn0004463) -1335 FBgn0024732 FBgn0024732 FBtr0330629 Drep-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3002 chr2L 19287503 19287685 + 14 NA Intergenic Intergenic 12257 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6108 chr2R 19526772 19526901 + 14 NA intron (FBgn0004795, intron 1 of 11) protein_coding-intron (FBgn0004795, intron 1 of 11) 6701 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8836 chr3L 24289593 24289761 + 14 NA intron (FBgn0011288, intron 7 of 7) protein_coding-intron (FBgn0011288, intron 7 of 7) -28290 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10890 chr3R 15080845 15080940 + 14 NA Intergenic Intergenic -2096 FBgn0038695 FBgn0038695 FBtr0083738 CG14280 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9347 chr3R 3284033 3284087 + 14 NA Intergenic Intergenic 6278 FBgn0011998 FBgn0011998 FBtr0081536 tRNA:V3b:84Da tRNA Nup98-S2-pascual-garcia2017_R1_peak_5683 chr2R 15949486 15949632 + 14 NA Intergenic Intergenic -49457 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2094 chr2L 14813519 14813698 + 14 NA Intergenic Intergenic 2820 FBgn0053309 FBgn0053309 FBtr0080674 CG33309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10804 chr3R 14374556 14374630 + 14 NA Intergenic Intergenic -3285 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9953 chr3R 8436350 8436484 + 14 NA Intergenic Intergenic 17019 FBgn0005671 FBgn0005671 FBtr0301661 Vha55 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6008 chr2R 18733957 18734011 + 14 NA exon (FBgn0034785, exon 2 of 4) protein_coding-exon (FBgn0034785, exon 2 of 4) 460 FBgn0034785 FBgn0034785 FBtr0303785 CG3649 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2032 chr2L 14596696 14596778 + 14 NA Intergenic Intergenic -2122 FBgn0028912 FBgn0028912 FBtr0080646 tRNA:P:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_8378 chr3L 17343527 17343588 + 14 NA promoter-TSS (FBgn0036713) protein_coding-promoter-TSS (FBgn0036713) -791 FBgn0036713 FBgn0036713 FBtr0075241 Mip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2522 chr2L 16807096 16807151 + 14 NA promoter-TSS (FBgn0086673) protein_coding-promoter-TSS (FBgn0086673) 2239 FBgn0086673 FBgn0086673 FBtr0080914 CG13272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8137 chr3L 15377093 15377193 + 14 NA Intergenic Intergenic -23789 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_349 chr2L 1958280 1958467 + 14 NA intron (FBgn0031375, intron 1 of 1) protein_coding-intron (FBgn0031375, intron 1 of 1) -3854 FBgn0031375 FBgn0031375 FBtr0330202 erm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2882 chr2L 18311030 18311175 + 14 NA Intergenic Intergenic -1695 FBgn0263086 FBgn0263086 FBtr0307101 CG43354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4934 chr2R 9286669 9286812 + 14 NA exon (FBgn0033834, exon 1 of 2) protein_coding-exon (FBgn0033834, exon 1 of 2) 133 FBgn0033834 FBgn0033834 FBtr0087717 CG4744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10779 chr3R 14284340 14284480 + 14 NA intron (FBgn0004652, intron 2 of 7) protein_coding-intron (FBgn0004652, intron 2 of 7) -47057 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12681 chr3R 27148850 27148904 + 14 NA intron (FBgn0085376, intron 1 of 7) protein_coding-intron (FBgn0085376, intron 1 of 16) 11981 FBgn0085376 FBgn0085376 FBtr0301051 CG34347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9373 chr3R 3565946 3566059 + 14 NA promoter-TSS (FBgn0262899) protein_coding-promoter-TSS (FBgn0262899) -717 FBgn0262899 FBgn0262899 FBtr0310579 CG43254 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3546 chr2L 21973431 21973626 + 14 NA Intergenic Intergenic 19405 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10225 chr3R 10602457 10602603 + 14 NA intron (FBgn0263929, intron 2 of 6) protein_coding-intron (FBgn0263929, intron 1 of 5) -19497 FBgn0038260 FBgn0038260 FBtr0082991 CG14855 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5239 chr2R 11926534 11926647 + 14 NA intron (FBgn0034070, intron 2 of 14) protein_coding-intron (FBgn0034070, intron 2 of 14) 7125 FBgn0034070 FBgn0034070 FBtr0087209 SP2353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12064 chr3R 24120598 24120705 + 14 NA TTS (FBgn0039576) protein_coding-TTS (FBgn0039576) 825 FBgn0039576 FBgn0039576 FBtr0085279 CG17856 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13112 chrU 251911 252005 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7432 chr3L 8727724 8727798 + 14 NA exon (FBgn0003149, exon 8 of 9) protein_coding-exon (FBgn0003149, exon 8 of 9) 2717 FBgn0000356 FBgn0000356 FBtr0076574 Cp16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1574 chr2L 11774899 11774953 + 14 NA Intergenic Intergenic -13535 FBgn0032374 FBgn0032374 FBtr0300370 CG14931 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4421 chr2R 5348291 5348522 + 14 NA intron (FBgn0259234, intron 1 of 16) protein_coding-intron (FBgn0259234, intron 3 of 18) -5953 FBgn0053757 FBgn0053757 FBtr0091758 CG33757 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6574 chr2RHet 1956812 1957125 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13022 chr4 1106263 1106456 + 14 NA promoter-TSS (FBgn0024913) protein_coding-promoter-TSS (FBgn0024913) -941 FBgn0024913 FBgn0024913 FBtr0089209 Actbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9131 chr3R 1965302 1965356 + 14 NA Intergenic Intergenic -11652 FBgn0263498 FBgn0263498 FBtr0309514 CR43487 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1457 chr2L 10693566 10693742 + 14 NA exon (FBgn0032285, exon 1 of 1) protein_coding-exon (FBgn0032285, exon 1 of 1) 449 FBgn0032285 FBgn0032285 FBtr0080127 CG17108 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4810 chr2R 8223896 8224020 + 14 NA promoter-TSS (FBgn0011878) tRNA-promoter-TSS (FBgn0011878) 35 FBgn0011878 FBgn0011878 FBtr0087900 tRNA:H:48F tRNA Nup98-S2-pascual-garcia2017_R1_peak_3726 chr2L 22477147 22477238 + 14 NA exon (FBgn0040011, exon 3 of 4) protein_coding-exon (FBgn0040011, exon 3 of 4) 4710 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10242 chr3R 10765535 10765678 + 14 NA Intergenic Intergenic 21204 FBgn0038279 FBgn0038279 FBtr0083004 CG3837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7992 chr3L 13978281 13978502 + 14 NA exon (FBgn0036391, exon 2 of 6) protein_coding-exon (FBgn0036391, exon 2 of 6) -1329 FBgn0036393 FBgn0036393 FBtr0333024 CG17362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6169 chr2R 20130547 20130677 + 14 NA promoter-TSS (FBgn0050418) protein_coding-promoter-TSS (FBgn0050418) -174 FBgn0050418 FBgn0050418 FBtr0072263 nord protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10465 chr3R 12236133 12236216 + 14 NA Intergenic Intergenic -6762 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8598 chr3L 20282578 20282682 + 14 NA intron (FBgn0052227, intron 1 of 9) protein_coding-intron (FBgn0052227, intron 1 of 9) 1622 FBgn0264482 FBgn0264482 FBtr0332777 CG43890 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10186 chr3R 10213442 10213615 + 14 NA Intergenic Intergenic -6107 FBgn0038225 FBgn0038225 FBtr0082940 soti protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3034 chr2L 19471135 19471209 + 14 NA exon (FBgn0264391, exon 1 of 1) ncRNA-exon (FBgn0264391, exon 1 of 1) 455 FBgn0264391 FBgn0264391 FBtr0332319 CR43839 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13363 chrUextra 12724826 12724880 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8221 chr3L 16204552 16204680 + 14 NA Intergenic Intergenic -2412 FBgn0264483 FBgn0264483 FBtr0332782 CR43891 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_264 chr2L 1457842 1457913 + 14 NA Intergenic Intergenic 15151 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_515 chr2L 3542565 3542752 + 14 NA intron (FBgn0024244, intron 1 of 2) protein_coding-intron (FBgn0024244, intron 1 of 2) 2923 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11304 chr3R 18144516 18144614 + 14 NA exon (FBgn0263117, exon 3 of 8) protein_coding-exon (FBgn0263117, exon 3 of 8) 5251 FBgn0263117 FBgn0263117 FBtr0330388 CG34377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11189 chr3R 17147604 17147680 + 14 NA exon (FBgn0038881, exon 13 of 15) protein_coding-exon (FBgn0038881, exon 13 of 15) 5101 FBgn0263537 FBgn0263537 FBtr0309636 mir-4951 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10924 chr3R 15350861 15351042 + 14 NA exon (FBgn0260003, exon 2 of 15) protein_coding-exon (FBgn0260003, exon 2 of 15) -34114 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10217 chr3R 10464697 10464751 + 14 NA exon (FBgn0038247, exon 5 of 10) protein_coding-exon (FBgn0038247, exon 5 of 10) 3561 FBgn0038248 FBgn0038248 FBtr0082976 CG7886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7 chr2L 34062 34213 + 14 NA exon (FBgn0051973, exon 7 of 13) protein_coding-exon (FBgn0051973, exon 7 of 13) -8982 FBgn0031209 FBgn0031209 FBtr0113008 Ir21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9430 chr3R 3992018 3992146 + 14 NA intron (FBgn0001138, intron 4 of 8) protein_coding-intron (FBgn0001138, intron 4 of 8) 15082 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4031 chr2R 1962865 1963061 + 14 NA exon (FBgn0033059, exon 2 of 3) protein_coding-exon (FBgn0033059, exon 2 of 3) 919 FBgn0033059 FBgn0033059 FBtr0086023 CG7845 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8945 chr3R 143812 143990 + 14 NA exon (FBgn0261086, exon 3 of 5) protein_coding-exon (FBgn0261086, exon 3 of 5) 890 FBgn0261086 FBgn0261086 FBtr0330038 Syt14 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1062 chr2L 8270797 8270865 + 14 NA intron (FBgn0003502, intron 4 of 11) protein_coding-intron (FBgn0003502, intron 2 of 9) -12186 FBgn0262374 FBgn0262374 FBtr0304202 mir-2b-1 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1232 chr2L 8852026 8852115 + 14 NA Intergenic Intergenic -10706 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12972 chr4 850492 850593 + 14 NA intron (FBgn0039938, intron 1 of 4) protein_coding-intron (FBgn0039938, intron 1 of 4) 4097 FBgn0039938 FBgn0039938 FBtr0089252 Sox102F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13716 chrX 13331542 13331661 + 14 NA Intergenic Intergenic -8338 FBgn0052635 FBgn0052635 FBtr0073780 Neto protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2696 chr2L 17576945 17577165 + 14 NA Intergenic Intergenic 2381 FBgn0262400 FBgn0262400 FBtr0304303 mir-287 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_13232 chrU 2657424 2657525 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_187 chr2L 1236891 1236977 + 14 NA Intergenic Intergenic -3104 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12131 chr3R 24373866 24373920 + 14 NA Intergenic Intergenic -3369 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4103 chr2R 2956753 2957003 + 14 NA TTS (FBgn0050298) tRNA-TTS (FBgn0050298) 670 FBgn0050298 FBgn0050298 FBtr0089059 tRNA:CR30298 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10623 chr3R 13275857 13275942 + 14 NA promoter-TSS (FBgn0000564) protein_coding-promoter-TSS (FBgn0000564) -649 FBgn0000564 FBgn0000564 FBtr0083444 Eh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7949 chr3L 13709737 13709829 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 86717 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10620 chr3R 13257139 13257319 + 14 NA intron (FBgn0038511, intron 1 of 9) protein_coding-intron (FBgn0038511, intron 1 of 9) 5735 FBgn0038511 FBgn0038511 FBtr0083442 CG5873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9531 chr3R 4793950 4794033 + 14 NA Intergenic Intergenic -5308 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10327 chr3R 11414197 11414310 + 14 NA Intergenic Intergenic -35759 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12381 chr3R 25467034 25467460 + 14 NA exon (FBgn0015129, exon 3 of 5) protein_coding-exon (FBgn0015129, exon 3 of 5) 18459 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2876 chr2L 18296821 18296898 + 14 NA exon (FBgn0032677, exon 1 of 1) protein_coding-exon (FBgn0032677, exon 1 of 1) 1955 FBgn0032677 FBgn0032677 FBtr0081050 CG5790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3846 chr2L 22903605 22903823 + 14 NA intron (FBgn0250907, intron 5 of 8) protein_coding-intron (FBgn0250907, intron 5 of 8) 14846 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11208 chr3R 17268363 17268417 + 14 NA intron (FBgn0011278, intron 1 of 1) protein_coding-intron (FBgn0011278, intron 1 of 1) 3652 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4524 chr2R 6190259 6190483 + 14 NA promoter-TSS (FBgn0033504) protein_coding-promoter-TSS (FBgn0033504) 6905 FBgn0028426 FBgn0028426 FBtr0088360 JhI-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11638 chr3R 22290305 22290417 + 14 NA promoter-TSS (FBgn0039430) protein_coding-promoter-TSS (FBgn0039430) -1434 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2869 chr2L 18275646 18276012 + 14 NA promoter-TSS (FBgn0261804) protein_coding-promoter-TSS (FBgn0261804) -59 FBgn0261804 FBgn0261804 FBtr0303280 CG42750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4327 chr2R 4718430 4718515 + 14 NA exon (FBgn0024189, exon 12 of 21) protein_coding-exon (FBgn0024189, exon 12 of 21) 4576 FBgn0050350 FBgn0050350 FBtr0088636 CG30350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12816 chr3R 27843476 27843548 + 14 NA Intergenic Intergenic -20583 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10254 chr3R 10860282 10860336 + 14 NA Intergenic Intergenic -2779 FBgn0038281 FBgn0038281 FBtr0083024 RpL10Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2463 chr2L 16410040 16410207 + 14 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) 7761 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8382 chr3L 17355116 17355271 + 14 NA TTS (FBgn0015550) protein_coding-TTS (FBgn0015550) 2411 FBgn0015550 FBgn0015550 FBtr0075216 tap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8606 chr3L 20541759 20541855 + 14 NA Intergenic Intergenic -8290 FBgn0037012 FBgn0037012 FBtr0078213 Rcd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10693 chr3R 13714921 13715018 + 14 NA intron (FBgn0053547, intron 8 of 19) protein_coding-intron (FBgn0053547, intron 8 of 19) -17217 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11141 chr3R 16634875 16634929 + 14 NA Intergenic Intergenic 7021 FBgn0038827 FBgn0038827 FBtr0083995 Fancd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7904 chr3L 13376235 13376344 + 14 NA exon (FBgn0001256, exon 2 of 2) protein_coding-exon (FBgn0001256, exon 2 of 2) 424 FBgn0001256 FBgn0001256 FBtr0075843 ImpL1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1192 chr2L 8786040 8786140 + 14 NA Intergenic Intergenic -3596 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7405 chr3L 8410778 8410832 + 14 NA exon (FBgn0052354, exon 2 of 4) protein_coding-exon (FBgn0052354, exon 2 of 4) 4500 FBgn0052354 FBgn0052354 FBtr0076662 CG32354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8078 chr3L 14669747 14669801 + 14 NA intron (FBgn0036436, intron 1 of 1) protein_coding-intron (FBgn0036436, intron 1 of 1) 1473 FBgn0036436 FBgn0036436 FBtr0075712 CG4914 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2501 chr2L 16665052 16665106 + 14 NA exon (FBgn0032593, exon 18 of 18) protein_coding-exon (FBgn0032593, exon 18 of 18) 7964 FBgn0259735 FBgn0259735 FBtr0300005 CG42389 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9382 chr3R 3652295 3652407 + 14 NA intron (FBgn0085413, intron 1 of 10) protein_coding-intron (FBgn0085413, intron 2 of 11) 12268 FBgn0085413 FBgn0085413 FBtr0302036 CG34384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2870 chr2L 18277843 18277950 + 14 NA Intergenic Intergenic -2126 FBgn0261804 FBgn0261804 FBtr0303280 CG42750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7951 chr3L 13717036 13717252 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 79356 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7871 chr3L 13108391 13108539 + 14 NA exon (FBgn0010452, exon 2 of 2) protein_coding-exon (FBgn0010452, exon 2 of 2) 1094 FBgn0010452 FBgn0010452 FBtr0330075 trn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5603 chr2R 15445548 15445686 + 14 NA intron (FBgn0003435, intron 5 of 10) protein_coding-intron (FBgn0003435, intron 5 of 9) 6041 FBgn0262571 FBgn0262571 FBtr0304898 CG43111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11267 chr3R 17669208 17669327 + 14 NA TTS (FBgn0045469) protein_coding-TTS (FBgn0045469) 220 FBgn0045470 FBgn0045470 FBtr0290236 Gr93b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13216 chrU 2419268 2419343 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11617 chr3R 22196983 22197065 + 14 NA Intergenic Intergenic 15814 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13089 chrU 189425 189612 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11596 chr3R 22144912 22144966 + 14 NA intron (FBgn0053970, intron 1 of 8) protein_coding-intron (FBgn0053970, intron 1 of 8) 6058 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10182 chr3R 10171656 10171885 + 14 NA intron (FBgn0024321, intron 1 of 3) protein_coding-intron (FBgn0024321, intron 1 of 3) 15691 FBgn0051320 FBgn0051320 FBtr0082943 CG31320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2742 chr2L 17779185 17779367 + 14 NA promoter-TSS (FBgn0015609) protein_coding-promoter-TSS (FBgn0015609) -13136 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8119 chr3L 15122428 15122517 + 14 NA exon (FBgn0036482, exon 2 of 3) protein_coding-exon (FBgn0036482, exon 2 of 3) 2006 FBgn0036482 FBgn0036482 FBtr0075654 CG13457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_652 chr2L 4482930 4482984 + 14 NA exon (FBgn0053196, exon 45 of 47) protein_coding-exon (FBgn0053196, exon 45 of 47) -5933 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3163 chr2L 20151250 20151346 + 14 NA Intergenic Intergenic -16375 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6678 chr2RHet 2847142 2847297 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11493 chr3R 21726752 21726947 + 14 NA exon (FBgn0051091, exon 2 of 3) protein_coding-exon (FBgn0051091, exon 2 of 3) 572 FBgn0051091 FBgn0051091 FBtr0309041 CG31091 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9388 chr3R 3684685 3684739 + 14 NA exon (FBgn0037525, exon 15 of 15) protein_coding-exon (FBgn0037525, exon 15 of 15) 27743 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13392 chrUextra 23136771 23136945 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5437 chr2R 13854179 13854277 + 14 NA Intergenic Intergenic -10153 FBgn0003140 FBgn0003140 FBtr0086817 PpY-55A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10028 chr3R 8956699 8956853 + 14 NA intron (FBgn0260793, intron 3 of 3) protein_coding-intron (FBgn0038118, intron 11 of 17) 24610 FBgn0260793 FBgn0260793 FBtr0330143 2mit protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6789 chr3L 1104523 1104702 + 14 NA Intergenic Intergenic -3523 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3079 chr2L 19713665 19713832 + 14 NA intron (FBgn0000464, intron 9 of 17) protein_coding-intron (FBgn0000464, intron 7 of 16) -12780 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6394 chr2RHet 699935 700241 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3350 chr2L 21194388 21194495 + 14 NA intron (FBgn0011829, intron 2 of 7) protein_coding-intron (FBgn0011829, intron 2 of 7) 1061 FBgn0011829 FBgn0011829 FBtr0081496 Ret protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5543 chr2R 14796722 14796940 + 14 NA exon (FBgn0028669, exon 1 of 1) protein_coding-exon (FBgn0028669, exon 1 of 1) 2388 FBgn0028669 FBgn0028669 FBtr0086602 Vha100-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8124 chr3L 15195311 15195390 + 14 NA Intergenic Intergenic -5594 FBgn0036490 FBgn0036490 FBtr0075644 CG6888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6822 chr3L 1361180 1361358 + 14 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -9359 FBgn0003295 FBgn0003295 FBtr0072681 ru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7944 chr3L 13667874 13667994 + 14 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 53997 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10304 chr3R 11282633 11282794 + 14 NA intron (FBgn0038341, intron 1 of 16) protein_coding-intron (FBgn0038341, intron 1 of 16) 17003 FBgn0000047 FBgn0000047 FBtr0083143 Act88F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4802 chr2R 8142636 8142690 + 14 NA exon (FBgn0033705, exon 3 of 4) protein_coding-exon (FBgn0033705, exon 3 of 4) 1166 FBgn0033705 FBgn0033705 FBtr0087999 CG13168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3933 chr2R 683841 683944 + 14 NA Intergenic Intergenic -7745 FBgn0250830 FBgn0250830 FBtr0111273 CG12547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11591 chr3R 22131800 22131880 + 14 NA Intergenic Intergenic 19157 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11937 chr3R 23628651 23628731 + 14 NA intron (FBgn0085382, intron 4 of 11) protein_coding-intron (FBgn0085382, intron 4 of 11) -42120 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12615 chr3R 26858462 26858516 + 14 NA Intergenic Intergenic -2579 FBgn0053773 FBgn0053773 FBtr0091774 CG33773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12165 chr3R 24520727 24520878 + 14 NA exon (FBgn0039594, exon 10 of 10) protein_coding-exon (FBgn0039594, exon 10 of 10) -1162 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4263 chr2R 4266340 4266515 + 14 NA intron (FBgn0261588, intron 2 of 10) protein_coding-intron (FBgn0261588, intron 2 of 10) 7849 FBgn0033287 FBgn0033287 FBtr0088740 CG8701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7253 chr3L 6941389 6941596 + 14 NA exon (FBgn0035719, exon 6 of 6) protein_coding-exon (FBgn0035719, exon 6 of 6) 5536 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2449 chr2L 16291357 16291796 + 14 NA TTS (FBgn0040079) protein_coding-TTS (FBgn0040079) 292 FBgn0028896 FBgn0028896 FBtr0080827 CG17329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_836 chr2L 5937736 5938048 + 14 NA exon (FBgn0015381, exon 5 of 5) protein_coding-exon (FBgn0015381, exon 5 of 5) 5371 FBgn0261055 FBgn0261055 FBtr0301935 Sfp26Ad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8138 chr3L 15385734 15385885 + 14 NA Intergenic Intergenic -15123 FBgn0036495 FBgn0036495 FBtr0075615 CG33259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5720 chr2R 16232192 16232369 + 14 NA exon (FBgn0034506, exon 4 of 4) protein_coding-exon (FBgn0034506, exon 4 of 4) 930 FBgn0034506 FBgn0034506 FBtr0086288 CG13870 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8568 chr3L 19650127 19650330 + 14 NA exon (FBgn0036899, exon 2 of 9) protein_coding-exon (FBgn0036899, exon 2 of 9) 6976 FBgn0036899 FBgn0036899 FBtr0331860 tey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3125 chr2L 19925847 19925901 + 14 NA exon (FBgn0263873, exon 8 of 16) protein_coding-exon (FBgn0263873, exon 8 of 16) 2873 FBgn0264375 FBgn0264375 FBtr0332241 CR43827 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12614 chr3R 26857310 26857459 + 14 NA Intergenic Intergenic -3684 FBgn0053773 FBgn0053773 FBtr0091774 CG33773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11205 chr3R 17259551 17259651 + 14 NA exon (FBgn0008651, exon 1 of 3) protein_coding-exon (FBgn0008651, exon 1 of 3) 254 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11672 chr3R 22460617 22460746 + 14 NA promoter-TSS (FBgn0051081) protein_coding-promoter-TSS (FBgn0051081) 85 FBgn0051081 FBgn0051081 FBtr0085033 TwdlR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11211 chr3R 17278575 17278713 + 14 NA Intergenic Intergenic -6602 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12736 chr3R 27384024 27384179 + 14 NA exon (FBgn0039852, exon 3 of 9) protein_coding-exon (FBgn0039852, exon 3 of 9) -13764 FBgn0028968 FBgn0028968 FBtr0330096 gammaCop protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9696 chr3R 6358244 6358517 + 14 NA intron (FBgn0001235, intron 8 of 12) protein_coding-intron (FBgn0001235, intron 7 of 11) -19602 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12345 chr3R 25353266 25353348 + 14 NA Intergenic Intergenic -7051 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6727 chr3L 608681 608974 + 14 NA Intergenic Intergenic -2258 FBgn0016715 FBgn0016715 FBtr0072561 Reg-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1099 chr2L 8572822 8572961 + 14 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 2003 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1480 chr2L 10897768 10897854 + 14 NA Intergenic Intergenic 3954 FBgn0032313 FBgn0032313 FBtr0080177 CG14070 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10356 chr3R 11587381 11587475 + 14 NA Intergenic Intergenic -1409 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11992 chr3R 23874040 23874158 + 14 NA intron (FBgn0085391, intron 1 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 21765 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5891 chr2R 17567818 17567930 + 14 NA exon (FBgn0050263, exon 4 of 10) protein_coding-exon (FBgn0050263, exon 4 of 10) -4914 FBgn0034654 FBgn0034654 FBtr0071670 CG10306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5194 chr2R 11492006 11492184 + 14 NA Intergenic Intergenic -9512 FBgn0260429 FBgn0260429 FBtr0304712 CG42524 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7859 chr3L 13061121 13061396 + 14 NA Intergenic Intergenic 5112 FBgn0085458 FBgn0085458 FBtr0112730 CG34429 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2927 chr2L 18744248 18744519 + 14 NA Intergenic Intergenic 4025 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_346 chr2L 1948087 1948290 + 14 NA Intergenic Intergenic -1460 FBgn0053673 FBgn0053673 FBtr0307516 CG33673 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11055 chr3R 16032789 16032993 + 14 NA intron (FBgn0083975, intron 2 of 13) protein_coding-intron (FBgn0083975, intron 2 of 13) 2360 FBgn0083975 FBgn0083975 FBtr0301075 CG34139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11123 chr3R 16503875 16503929 + 14 NA promoter-TSS (FBgn0038820) protein_coding-promoter-TSS (FBgn0038820) -3 FBgn0263406 FBgn0263406 FBtr0309185 CR43452 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_496 chr2L 3360721 3360775 + 14 NA exon (FBgn0085423, exon 10 of 10) protein_coding-exon (FBgn0085423, exon 10 of 10) 3102 FBgn0031526 FBgn0031526 FBtr0077588 CG8838 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13162 chrU 1307191 1307323 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1919 chr2L 14298931 14299032 + 14 NA intron (FBgn0261563, intron 4 of 12) protein_coding-intron (FBgn0261563, intron 4 of 15) -3587 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8279 chr3L 16557393 16557459 + 14 NA exon (FBgn0026061, exon 6 of 6) protein_coding-exon (FBgn0026061, exon 6 of 6) -2424 FBgn0262842 FBgn0262842 FBtr0306084 CG43206 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8516 chr3L 18579455 18579815 + 14 NA Intergenic Intergenic -2224 FBgn0036791 FBgn0036791 FBtr0075101 CG7271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5581 chr2R 15138068 15138281 + 14 NA TTS (FBgn0053454) protein_coding-TTS (FBgn0053454) 908 FBgn0004003 FBgn0004003 FBtr0086510 wbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12611 chr3R 26843029 26843123 + 14 NA promoter-TSS (FBgn0004573) protein_coding-promoter-TSS (FBgn0004573) -507 FBgn0004573 FBgn0004573 FBtr0085746 5-HT7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10428 chr3R 11957583 11957813 + 14 NA intron (FBgn0003319, intron 1 of 10) protein_coding-intron (FBgn0003319, intron 1 of 10) 3247 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5641 chr2R 15667832 15667931 + 14 NA Intergenic Intergenic 3644 FBgn0034474 FBgn0034474 FBtr0086343 Obp56g protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11492 chr3R 21721282 21721468 + 14 NA promoter-TSS (FBgn0039386) protein_coding-promoter-TSS (FBgn0039386) -169 FBgn0039386 FBgn0039386 FBtr0309040 CG5948 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12148 chr3R 24418413 24418510 + 14 NA promoter-TSS (FBgn0263388) protein_coding-promoter-TSS (FBgn0263388) -749 FBgn0263388 FBgn0263388 FBtr0309076 CG43440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11691 chr3R 22511406 22511533 + 14 NA Intergenic Intergenic -3781 FBgn0250908 FBgn0250908 FBtr0290328 beat-VII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9089 chr3R 1607749 1607803 + 14 NA promoter-TSS (FBgn0027608) protein_coding-promoter-TSS (FBgn0027608) 292 FBgn0037375 FBgn0037375 FBtr0300738 kat-60L1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7129 chr3L 5976051 5976166 + 14 NA Intergenic Intergenic -7001 FBgn0035656 FBgn0035656 FBtr0332041 CG10479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9438 chr3R 4032011 4032132 + 14 NA Intergenic Intergenic -1519 FBgn0261290 FBgn0261290 FBtr0091780 CheA84a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9316 chr3R 3114739 3114793 + 14 NA intron (FBgn0259172, intron 7 of 8) protein_coding-intron (FBgn0259172, intron 6 of 7) 3082 FBgn0045843 FBgn0045843 FBtr0081581 RacGAP84C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2775 chr2L 17859272 17859412 + 14 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 2 of 14) 15905 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7225 chr3L 6771881 6772017 + 14 NA Intergenic Intergenic -11309 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9699 chr3R 6376245 6376367 + 14 NA intron (FBgn0001235, intron 6 of 12) protein_coding-intron (FBgn0001235, intron 6 of 11) -37528 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11261 chr3R 17655246 17655300 + 14 NA Intergenic Intergenic -2952 FBgn0041229 FBgn0041229 FBtr0084133 Gr93a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1275 chr2L 8920620 8920799 + 14 NA intron (FBgn0085427, intron 2 of 10) protein_coding-intron (FBgn0085427, intron 2 of 10) -13354 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9704 chr3R 6405734 6405843 + 14 NA intron (FBgn0001235, intron 5 of 12) protein_coding-intron (FBgn0001235, intron 5 of 11) 25604 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1759 chr2L 13025297 13025392 + 14 NA exon (FBgn0262160, exon 7 of 7) protein_coding-exon (FBgn0262160, exon 7 of 7) -4037 FBgn0028965 FBgn0028965 FBtr0080427 A16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10402 chr3R 11901794 11901974 + 14 NA promoter-TSS (FBgn0026059) protein_coding-promoter-TSS (FBgn0026059) 2 FBgn0026059 FBgn0026059 FBtr0303845 Mhcl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11495 chr3R 21728466 21728534 + 14 NA TTS (FBgn0051091) protein_coding-TTS (FBgn0051091) 135 FBgn0051089 FBgn0051089 FBtr0084942 CG31089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8933 chr3LHet 2476082 2476241 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1435 chr2L 10545796 10546134 + 14 NA exon (FBgn0051721, exon 1 of 9) protein_coding-exon (FBgn0051721, exon 1 of 9) 1084 FBgn0051721 FBgn0051721 FBtr0304114 Trim9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11279 chr3R 17922007 17922173 + 14 NA intron (FBgn0038930, intron 1 of 2) protein_coding-intron (FBgn0038930, intron 1 of 2) -7046 FBgn0038931 FBgn0038931 FBtr0084181 CG13407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9135 chr3R 2018986 2019251 + 14 NA exon (FBgn0037408, exon 5 of 5) protein_coding-exon (FBgn0037408, exon 5 of 5) -5417 FBgn0037409 FBgn0037409 FBtr0078591 Osi24 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9268 chr3R 2813324 2813462 + 14 NA intron (FBgn0260642, intron 1 of 6) protein_coding-intron (FBgn0260642, intron 1 of 6) -54831 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6226 chr2R 20507005 20507059 + 14 NA intron (FBgn0035041, intron 7 of 7) protein_coding-intron (FBgn0035041, intron 7 of 7) -4369 FBgn0035040 FBgn0035040 FBtr0072337 CG4741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_785 chr2L 5591326 5591380 + 14 NA Intergenic Intergenic -2939 FBgn0031723 FBgn0031723 FBtr0079117 CG7251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_604 chr2L 4213246 4213300 + 14 NA exon (FBgn0001075, exon 2 of 9) protein_coding-exon (FBgn0001075, exon 2 of 9) 8523 FBgn0001075 FBgn0001075 FBtr0077478 ft protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4743 chr2R 7746804 7746990 + 14 NA exon (FBgn0013756, exon 2 of 5) protein_coding-exon (FBgn0013756, exon 2 of 5) -1918 FBgn0085259 FBgn0085259 FBtr0112423 CG34230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12152 chr3R 24468269 24468454 + 14 NA exon (FBgn0039592, exon 2 of 3) protein_coding-exon (FBgn0039592, exon 2 of 3) 252 FBgn0039592 FBgn0039592 FBtr0100373 CG14062 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8381 chr3L 17353739 17353870 + 14 NA exon (FBgn0015550, exon 1 of 1) protein_coding-exon (FBgn0015550, exon 1 of 1) 1022 FBgn0015550 FBgn0015550 FBtr0075216 tap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9070 chr3R 1360345 1360453 + 14 NA exon (FBgn0010051, exon 13 of 19) protein_coding-exon (FBgn0010051, exon 13 of 19) 7098 FBgn0010051 FBgn0010051 FBtr0078687 Itp-r83A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10687 chr3R 13681060 13681177 + 14 NA intron (FBgn0261649, intron 5 of 9) protein_coding-intron (FBgn0261649, intron 5 of 9) 43852 FBgn0261649 FBgn0261649 FBtr0304905 tinc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4782 chr2R 7993747 7993850 + 14 NA intron (FBgn0086677, intron 1 of 2) protein_coding-intron (FBgn0086677, intron 1 of 2) 13047 FBgn0086677 FBgn0086677 FBtr0088021 jeb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3784 chr2L 22621984 22622234 + 14 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 22418 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13156 chrU 1254465 1254764 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13024 chr4 1112959 1113060 + 14 NA exon (FBgn0005561, exon 2 of 13) protein_coding-exon (FBgn0005561, exon 2 of 13) -6004 FBgn0005561 FBgn0005561 FBtr0301563 sv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8772 chr3L 23743864 23743972 + 14 NA Intergenic Intergenic 12858 FBgn0040056 FBgn0040056 FBtr0333914 CG17698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8345 chr3L 17164093 17164147 + 14 NA intron (FBgn0260943, intron 4 of 14) protein_coding-intron (FBgn0260943, intron 4 of 14) 4157 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10580 chr3R 12876464 12876603 + 14 NA Intergenic Intergenic -3196 FBgn0020493 FBgn0020493 FBtr0083394 Dad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2857 chr2L 18186467 18186685 + 14 NA intron (FBgn0261804, intron 12 of 14) protein_coding-intron (FBgn0261804, intron 12 of 14) -1946 FBgn0032673 FBgn0032673 FBtr0081061 CG7180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1532 chr2L 11360687 11360917 + 14 NA intron (FBgn0000287, intron 1 of 6) protein_coding-intron (FBgn0000287, intron 1 of 6) 1929 FBgn0000287 FBgn0000287 FBtr0080236 salr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10630 chr3R 13317398 13317452 + 14 NA intron (FBgn0261046, intron 8 of 34) protein_coding-intron (FBgn0261046, intron 9 of 34) 13964 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10134 chr3R 9705372 9705505 + 14 NA Intergenic Intergenic -4800 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2981 chr2L 19210651 19210710 + 14 NA Intergenic Intergenic 20334 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13127 chrU 446049 446114 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5966 chr2R 18253194 18253360 + 14 NA intron (FBgn0034720, intron 1 of 10) protein_coding-intron (FBgn0034720, intron 1 of 13) 7333 FBgn0034720 FBgn0034720 FBtr0113107 Liprin-gamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2237 chr2L 15401549 15401664 + 14 NA Intergenic Intergenic 23979 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7004 chr3L 3647101 3647261 + 14 NA exon (FBgn0263239, exon 4 of 6) protein_coding-exon (FBgn0263239, exon 4 of 6) 7590 FBgn0035455 FBgn0035455 FBtr0073139 CG10862 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13166 chrU 1354301 1354616 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5471 chr2R 14122824 14123137 + 14 NA exon (FBgn0000658, exon 1 of 1) protein_coding-exon (FBgn0000658, exon 1 of 1) 2712 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_339 chr2L 1862285 1862375 + 14 NA intron (FBgn0051663, intron 10 of 10) protein_coding-intron (FBgn0051663, intron 11 of 11) -7537 FBgn0031372 FBgn0031372 FBtr0077891 CG7295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10410 chr3R 11924468 11924549 + 14 NA promoter-TSS (FBgn0010379) protein_coding-promoter-TSS (FBgn0010379) -430 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9146 chr3R 2086013 2086072 + 14 NA exon (FBgn0037416, exon 1 of 3) protein_coding-exon (FBgn0037416, exon 1 of 3) 107 FBgn0037416 FBgn0037416 FBtr0078599 Osi9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7287 chr3L 7190536 7190653 + 14 NA Intergenic Intergenic -7577 FBgn0263218 FBgn0263218 FBtr0299546 Dscam2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10912 chr3R 15244772 15244906 + 14 NA intron (FBgn0051221, intron 2 of 4) protein_coding-intron (FBgn0051221, intron 2 of 4) 6082 FBgn0038706 FBgn0038706 FBtr0083770 CG3517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2275 chr2L 15514317 15514485 + 14 NA Intergenic Intergenic -8037 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9359 chr3R 3421342 3421429 + 14 NA intron (FBgn0083963, intron 4 of 12) protein_coding-intron (FBgn0083963, intron 4 of 12) 43771 FBgn0083963 FBgn0083963 FBtr0301072 CG34127 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4625 chr2R 7024946 7025039 + 14 NA exon (FBgn0033578, exon 6 of 10) protein_coding-exon (FBgn0033578, exon 6 of 10) 1559 FBgn0033578 FBgn0033578 FBtr0088202 BBS4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7487 chr3L 9179333 9179481 + 14 NA Intergenic Intergenic -4158 FBgn0004244 FBgn0004244 FBtr0309054 Rdl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13222 chrU 2433136 2433190 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4751 chr2R 7812055 7812132 + 14 NA Intergenic Intergenic -11813 FBgn0033667 FBgn0033667 FBtr0088054 CG13183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10851 chr3R 14759734 14759815 + 14 NA intron (FBgn0261262, intron 2 of 17) protein_coding-intron (FBgn0261262, intron 2 of 18) 4856 FBgn0261262 FBgn0261262 FBtr0304686 CG42613 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11330 chr3R 18692666 18692799 + 14 NA Intergenic Intergenic -15206 FBgn0264428 FBgn0264428 FBtr0332548 CR43846 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10540 chr3R 12649892 12650034 + 14 NA intron (FBgn0000014, intron 3 of 5) protein_coding-intron (FBgn0000014, intron 4 of 6) 5804 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5377 chr2R 13241771 13241942 + 14 NA TTS (FBgn0261642) protein_coding-TTS (FBgn0261642) 37494 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1617 chr2L 12180161 12180296 + 14 NA intron (FBgn0000114, intron 1 of 8) protein_coding-intron (FBgn0000114, intron 1 of 8) -2476 FBgn0032422 FBgn0032422 FBtr0331999 atilla protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2759 chr2L 17803845 17804026 + 14 NA intron (FBgn0262018, intron 7 of 14) protein_coding-intron (FBgn0262018, intron 6 of 13) 8737 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_464 chr2L 3083023 3083104 + 14 NA intron (FBgn0015600, intron 4 of 8) protein_coding-intron (FBgn0015600, intron 6 of 10) 24601 FBgn0027571 FBgn0027571 FBtr0290093 CG3523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7043 chr3L 4425029 4425083 + 14 NA exon (FBgn0035543, exon 5 of 9) protein_coding-exon (FBgn0035543, exon 5 of 9) 3394 FBgn0035543 FBgn0035543 FBtr0073298 CG15020 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5568 chr2R 14957212 14957266 + 14 NA intron (FBgn0004168, intron 1 of 10) protein_coding-intron (FBgn0004168, intron 1 of 10) 2579 FBgn0004168 FBgn0004168 FBtr0086577 5-HT1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6315 chr2RHet 123304 123591 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5687 chr2R 15987289 15987457 + 14 NA Intergenic Intergenic -11643 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1544 chr2L 11472693 11472808 + 14 NA Intergenic Intergenic -11957 FBgn0003313 FBgn0003313 FBtr0080237 sala protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11170 chr3R 16870296 16870474 + 14 NA TTS (FBgn0051189) protein_coding-TTS (FBgn0051189) 570 FBgn0038847 FBgn0038847 FBtr0084003 CG12278 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2063 chr2L 14719400 14719588 + 14 NA Intergenic Intergenic 5717 FBgn0085194 FBgn0085194 FBtr0112356 CG34165 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8764 chr3L 23658723 23659073 + 14 NA intron (FBgn0250816, intron 7 of 7) protein_coding-intron (FBgn0250816, intron 7 of 7) -49493 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13247 chrU 3551300 3551419 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5674 chr2R 15890987 15891041 + 14 NA TTS (FBgn0034480) protein_coding-TTS (FBgn0034480) 1478 FBgn0034480 FBgn0034480 FBtr0086325 CG16898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8999 chr3R 768069 768251 + 14 NA exon (FBgn0051536, exon 12 of 13) protein_coding-exon (FBgn0051536, exon 12 of 13) 5658 FBgn0004183 FBgn0004183 FBtr0078851 snRNA:U1:82Eb snRNA Nup98-S2-pascual-garcia2017_R1_peak_2624 chr2L 17192590 17192709 + 14 NA intron (FBgn0032629, intron 4 of 6) protein_coding-intron (FBgn0032629, intron 4 of 5) 10711 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6667 chr2RHet 2447577 2447712 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7796 chr3L 12573669 12573751 + 14 NA promoter-TSS (FBgn0015904) protein_coding-promoter-TSS (FBgn0015904) -62 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10127 chr3R 9684796 9684993 + 14 NA Intergenic Intergenic -3718 FBgn0038186 FBgn0038186 FBtr0082881 CG14362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3963 chr2R 851818 852054 + 14 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 14764 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1949 chr2L 14369710 14369945 + 14 NA Intergenic Intergenic 7758 FBgn0015546 FBgn0015546 FBtr0080630 spel1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10493 chr3R 12401674 12401867 + 14 NA intron (FBgn0020907, intron 4 of 4) protein_coding-intron (FBgn0020907, intron 4 of 4) -2190 FBgn0038446 FBgn0038446 FBtr0083303 CG14903 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9945 chr3R 8404959 8405177 + 14 NA intron (FBgn0038063, intron 1 of 6) protein_coding-intron (FBgn0038063, intron 1 of 6) -18180 FBgn0038063 FBgn0038063 FBtr0330120 Octbeta2R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6363 chr2RHet 529461 529526 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6050 chr2R 18990438 18990564 + 14 NA TTS (FBgn0041236) protein_coding-TTS (FBgn0041236) 755 FBgn0041235 FBgn0041235 FBtr0071977 Gr59c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12167 chr3R 24530689 24530770 + 14 NA intron (FBgn0027655, intron 6 of 28) protein_coding-intron (FBgn0027655, intron 6 of 28) 8765 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7424 chr3L 8634672 8634726 + 14 NA intron (FBgn0052029, intron 2 of 2) protein_coding-intron (FBgn0052029, intron 2 of 2) 1160 FBgn0052029 FBgn0052029 FBtr0076567 Cpr66D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11831 chr3R 23208150 23208278 + 14 NA exon (FBgn0016061, exon 16 of 17) protein_coding-exon (FBgn0016061, exon 16 of 17) -12627 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7464 chr3L 8999493 8999547 + 14 NA exon (FBgn0035954, exon 5 of 5) protein_coding-exon (FBgn0035954, exon 5 of 5) 1224 FBgn0035954 FBgn0035954 FBtr0076521 Doc3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8333 chr3L 17102516 17102621 + 14 NA intron (FBgn0260943, intron 7 of 14) protein_coding-intron (FBgn0260943, intron 7 of 14) 53855 FBgn0036698 FBgn0036698 FBtr0075284 CG7724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7117 chr3L 5875048 5875167 + 14 NA promoter-TSS (FBgn0035643) protein_coding-promoter-TSS (FBgn0035643) -297 FBgn0035643 FBgn0035643 FBtr0330086 CG13287 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9263 chr3R 2773342 2773511 + 14 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 2 of 6) -14864 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2005 chr2L 14512019 14512165 + 14 NA Intergenic Intergenic -5999 FBgn0011862 FBgn0011862 FBtr0089613 tRNA:G3:35Ba tRNA Nup98-S2-pascual-garcia2017_R1_peak_6414 chr2RHet 838540 838718 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4925 chr2R 9253114 9253168 + 14 NA Intergenic Intergenic -11168 FBgn0033828 FBgn0033828 FBtr0087721 CG17048 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4088 chr2R 2796031 2796166 + 14 NA intron (FBgn0050158, intron 3 of 7) protein_coding-intron (FBgn0050158, intron 3 of 7) -14853 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9208 chr3R 2524270 2524459 + 14 NA TTS (FBgn0063127) ncRNA-TTS (FBgn0063127) 1522 FBgn0063127 FBgn0063127 FBtr0091948 pncr002:3R ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11352 chr3R 19072050 19072237 + 14 NA intron (FBgn0039064, intron 1 of 12) protein_coding-intron (FBgn0039064, intron 1 of 12) 2480 FBgn0039064 FBgn0039064 FBtr0084390 CG4467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12523 chr3R 26261923 26262074 + 14 NA exon (FBgn0039770, exon 3 of 7) protein_coding-exon (FBgn0039770, exon 3 of 7) 4212 FBgn0039769 FBgn0039769 FBtr0085644 CG15534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5159 chr2R 11164324 11164435 + 14 NA intron (FBgn0083959, intron 12 of 30) protein_coding-intron (FBgn0083959, intron 12 of 24) 16007 FBgn0083959 FBgn0083959 FBtr0110831 trpm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5135 chr2R 10972207 10972282 + 14 NA Intergenic Intergenic -28498 FBgn0053467 FBgn0053467 FBtr0089861 CG33467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_719 chr2L 5121768 5121849 + 14 NA exon (FBgn0261836, exon 3 of 18) protein_coding-exon (FBgn0261836, exon 3 of 18) -21606 FBgn0031684 FBgn0031684 FBtr0079025 CG8680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5649 chr2R 15733951 15734215 + 14 NA Intergenic Intergenic -18139 FBgn0043532 FBgn0043532 FBtr0086337 Obp56i protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6666 chr2RHet 2447253 2447322 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9037 chr3R 1163028 1163107 + 14 NA intron (FBgn0013576, intron 1 of 18) protein_coding-intron (FBgn0013576, intron 1 of 14) 17402 FBgn0037312 FBgn0037312 FBtr0078807 CG11999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11822 chr3R 23188232 23188375 + 14 NA exon (FBgn0260487, exon 4 of 7) protein_coding-exon (FBgn0260487, exon 4 of 7) 3191 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3384 chr2L 21359458 21359531 + 14 NA Intergenic Intergenic -1722 FBgn0023090 FBgn0023090 FBtr0081516 dtr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11285 chr3R 17976055 17976233 + 14 NA intron (FBgn0051163, intron 3 of 18) protein_coding-intron (FBgn0051163, intron 3 of 18) 16587 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12103 chr3R 24270402 24270513 + 14 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) 26527 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_629 chr2L 4362054 4362220 + 14 NA promoter-TSS (FBgn0026319) protein_coding-promoter-TSS (FBgn0026319) 9162 FBgn0031596 FBgn0031596 FBtr0077428 CG15429 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_108 chr2L 910956 911118 + 14 NA Intergenic Intergenic -3049 FBgn0046113 FBgn0046113 FBtr0273244 GluRIIC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11601 chr3R 22166819 22166901 + 14 NA intron (FBgn0053970, intron 2 of 8) protein_coding-intron (FBgn0053970, intron 2 of 8) 4335 FBgn0039421 FBgn0039421 FBtr0085027 CG6036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7232 chr3L 6825217 6825364 + 14 NA Intergenic Intergenic 42032 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6754 chr3L 660695 660766 + 14 NA Intergenic Intergenic 6367 FBgn0035150 FBgn0035150 FBtr0072557 Rev1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11941 chr3R 23633959 23634095 + 14 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -36784 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12311 chr3R 25193212 25193385 + 14 NA Intergenic Intergenic -47962 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2377 chr2L 15980023 15980190 + 14 NA TTS (FBgn0028858) protein_coding-TTS (FBgn0028858) 571 FBgn0028858 FBgn0028858 FBtr0080800 CG10839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11168 chr3R 16838239 16838364 + 14 NA exon (FBgn0013995, exon 8 of 9) protein_coding-exon (FBgn0013995, exon 8 of 9) -3370 FBgn0038846 FBgn0038846 FBtr0309208 CG5697 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5427 chr2R 13723863 13724002 + 14 NA intron (FBgn0259211, intron 9 of 13) protein_coding-intron (FBgn0259211, intron 9 of 12) -10274 FBgn0015522 FBgn0015522 FBtr0086799 olf186-M protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11791 chr3R 23045040 23045154 + 14 NA Intergenic Intergenic -1401 FBgn0054006 FBgn0054006 FBtr0303711 CG34006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3275 chr2L 20697885 20697980 + 14 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 15562 FBgn0032877 FBgn0032877 FBtr0081391 CG2617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5646 chr2R 15700697 15700826 + 14 NA Intergenic Intergenic -2298 FBgn0034475 FBgn0034475 FBtr0302932 Obp56h protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12353 chr3R 25377675 25377901 + 14 NA Intergenic Intergenic -4321 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12013 chr3R 23948614 23948731 + 14 NA Intergenic Intergenic -23930 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2127 chr2L 14936553 14936627 + 14 NA exon (FBgn0259213, exon 6 of 20) protein_coding-exon (FBgn0259213, exon 6 of 20) 11855 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5738 chr2R 16399474 16399696 + 14 NA TTS (FBgn0034510) protein_coding-TTS (FBgn0034510) 1089 FBgn0034510 FBgn0034510 FBtr0086295 CG13426 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11769 chr3R 22904525 22904645 + 14 NA exon (FBgn0039479, exon 2 of 5) protein_coding-exon (FBgn0039479, exon 2 of 5) 2993 FBgn0039479 FBgn0039479 FBtr0331702 CG14257 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12791 chr3R 27697933 27698137 + 14 NA intron (FBgn0011224, intron 9 of 16) protein_coding-intron (FBgn0011224, intron 6 of 13) 46469 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_841 chr2L 5942849 5943007 + 14 NA promoter-TSS (FBgn0001128) protein_coding-promoter-TSS (FBgn0001128) 335 FBgn0261055 FBgn0261055 FBtr0301935 Sfp26Ad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12960 chr4 731580 731641 + 14 NA exon (FBgn0005558, exon 2 of 8) protein_coding-exon (FBgn0005558, exon 2 of 8) 5907 FBgn0005558 FBgn0005558 FBtr0100395 ey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2559 chr2L 16966357 16966523 + 14 NA Intergenic Intergenic -6651 FBgn0053179 FBgn0053179 FBtr0329973 beat-IIIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10139 chr3R 9738082 9738154 + 14 NA Intergenic Intergenic 10537 FBgn0000576 FBgn0000576 FBtr0082863 ems protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2796 chr2L 17949096 17949183 + 14 NA Intergenic Intergenic -14275 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6476 chr2RHet 1452281 1452378 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1255 chr2L 8879242 8879325 + 14 NA Intergenic Intergenic -12206 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6224 chr2R 20504655 20504709 + 14 NA intron (FBgn0035041, intron 7 of 7) protein_coding-intron (FBgn0035041, intron 7 of 7) -2019 FBgn0035040 FBgn0035040 FBtr0072337 CG4741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2698 chr2L 17579626 17579813 + 14 NA Intergenic Intergenic 5045 FBgn0262400 FBgn0262400 FBtr0304303 mir-287 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5249 chr2R 12038008 12038106 + 14 NA promoter-TSS (FBgn0034081) protein_coding-promoter-TSS (FBgn0034081) 429 FBgn0034083 FBgn0034083 FBtr0302084 lbk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5817 chr2R 17149967 17150126 + 14 NA intron (FBgn0085426, intron 2 of 8) protein_coding-intron (FBgn0085426, intron 1 of 8) 3801 FBgn0050391 FBgn0050391 FBtr0071621 CG30391 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11979 chr3R 23829072 23829163 + 14 NA Intergenic Intergenic -12644 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_552 chr2L 3764594 3764748 + 14 NA promoter-TSS (FBgn0263842) protein_coding-promoter-TSS (FBgn0263842) -848 FBgn0263842 FBgn0263842 FBtr0321298 CG43703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10906 chr3R 15222629 15222683 + 14 NA TTS (FBgn0051244) protein_coding-TTS (FBgn0051244) 1633 FBgn0051244 FBgn0051244 FBtr0083772 CG31244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11603 chr3R 22170799 22170992 + 14 NA exon (FBgn0039421, exon 1 of 1) protein_coding-exon (FBgn0039421, exon 1 of 1) 300 FBgn0039421 FBgn0039421 FBtr0085027 CG6036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13220 chrU 2427419 2427536 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5965 chr2R 18251075 18251197 + 14 NA intron (FBgn0034720, intron 1 of 10) protein_coding-intron (FBgn0034720, intron 1 of 13) 9474 FBgn0034720 FBgn0034720 FBtr0113107 Liprin-gamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3397 chr2L 21377559 21377730 + 14 NA exon (FBgn0032945, exon 3 of 3) protein_coding-exon (FBgn0032945, exon 3 of 3) -2356 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1288 chr2L 8975671 8975757 + 14 NA promoter-TSS (FBgn0032083) protein_coding-promoter-TSS (FBgn0032083) -738 FBgn0032083 FBgn0032083 FBtr0332207 CG9541 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9047 chr3R 1239477 1239544 + 14 NA promoter-TSS (FBgn0037326) protein_coding-promoter-TSS (FBgn0037326) -765 FBgn0037326 FBgn0037326 FBtr0078679 CG14669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6278 chr2R 20997196 20997400 + 14 NA Intergenic Intergenic -10587 FBgn0003715 FBgn0003715 FBtr0330231 CG16778 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5938 chr2R 18093701 18093950 + 14 NA promoter-TSS (FBgn0034710) protein_coding-promoter-TSS (FBgn0034710) -744 FBgn0034710 FBgn0034710 FBtr0071783 CG3292 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3803 chr2L 22683785 22683895 + 14 NA Intergenic Intergenic 7168 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4622 chr2R 7006740 7006870 + 14 NA TTS (FBgn0050489) protein_coding-TTS (FBgn0050489) 2548 FBgn0050489 FBgn0050489 FBtr0089419 Cyp12d1-p protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6699 chr3L 80351 80405 + 14 NA Intergenic Intergenic -5046 FBgn0035097 FBgn0035097 FBtr0072541 CG13405 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7926 chr3L 13544144 13544279 + 14 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -31506 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2886 chr2L 18357696 18357769 + 14 NA exon (FBgn0011559, exon 2 of 2) protein_coding-exon (FBgn0011559, exon 2 of 2) 1294 FBgn0011559 FBgn0011559 FBtr0081054 Acp36DE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11217 chr3R 17319641 17319759 + 14 NA Intergenic Intergenic -6277 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6943 chr3L 2702623 2702704 + 14 NA intron (FBgn0264606, intron 1 of 16) protein_coding-intron (FBgn0264606, intron 1 of 17) 9027 FBgn0264606 FBgn0264606 FBtr0333631 CG43955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10746 chr3R 14057440 14057595 + 14 NA Intergenic Intergenic -4399 FBgn0011701 FBgn0011701 FBtr0083564 repo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13606 chrX 8434670 8434818 + 14 NA intron (FBgn0002968, intron 3 of 7) protein_coding-intron (FBgn0002968, intron 3 of 7) -11013 FBgn0024943 FBgn0024943 FBtr0071235 PIP82 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_805 chr2L 5724035 5724128 + 14 NA promoter-TSS (FBgn0031736) protein_coding-promoter-TSS (FBgn0031736) -575 FBgn0031736 FBgn0031736 FBtr0079135 CG11030 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12751 chr3R 27486946 27487139 + 14 NA exon (FBgn0039862, exon 4 of 4) protein_coding-exon (FBgn0039862, exon 4 of 4) -8145 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_337 chr2L 1855776 1855871 + 14 NA intron (FBgn0051665, intron 12 of 12) protein_coding-intron (FBgn0051665, intron 12 of 12) -14044 FBgn0031372 FBgn0031372 FBtr0077891 CG7295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10797 chr3R 14349713 14349888 + 14 NA intron (FBgn0004652, intron 1 of 7) protein_coding-intron (FBgn0004652, intron 1 of 7) 21508 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2398 chr2L 16045220 16045347 + 14 NA exon (FBgn0000182, exon 7 of 11) protein_coding-exon (FBgn0000182, exon 7 of 11) 731 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1367 chr2L 9636475 9636553 + 14 NA intron (FBgn0032136, intron 1 of 19) protein_coding-intron (FBgn0032136, intron 1 of 19) 2313 FBgn0032136 FBgn0032136 FBtr0303874 CG15828 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11877 chr3R 23342667 23343021 + 14 NA exon (FBgn0039522, exon 1 of 1) protein_coding-exon (FBgn0039522, exon 1 of 1) 135 FBgn0039522 FBgn0039522 FBtr0085212 CG13972 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2386 chr2L 16014526 16014683 + 14 NA intron (FBgn0028644, intron 2 of 7) protein_coding-intron (FBgn0028644, intron 2 of 7) -8325 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_228 chr2L 1382474 1382627 + 14 NA exon (FBgn0002543, exon 14 of 14) protein_coding-exon (FBgn0002543, exon 14 of 14) 14461 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11136 chr3R 16569072 16569175 + 14 NA TTS (FBgn0051200) protein_coding-TTS (FBgn0051200) 468 FBgn0051199 FBgn0051199 FBtr0083930 CG31199 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2656 chr2L 17302104 17302302 + 14 NA Intergenic Intergenic 9617 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_581 chr2L 4099733 4099938 + 14 NA exon (FBgn0000547, exon 6 of 9) protein_coding-exon (FBgn0000547, exon 6 of 9) 13945 FBgn0086032 FBgn0086032 FBtr0114308 snoRNA:Me28S-C437 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_1802 chr2L 13436980 13437049 + 14 NA intron (FBgn0026760, intron 1 of 1) protein_coding-intron (FBgn0026760, intron 1 of 1) 1392 FBgn0026760 FBgn0026760 FBtr0080502 Tehao protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12157 chr3R 24479796 24479978 + 14 NA Intergenic Intergenic -3685 FBgn0051050 FBgn0051050 FBtr0085317 CG31050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5887 chr2R 17486098 17486244 + 14 NA Intergenic Intergenic 8280 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13288 chrUextra 129084 129219 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_431 chr2L 2716062 2716392 + 14 NA intron (FBgn0051690, intron 5 of 7) protein_coding-intron (FBgn0051690, intron 6 of 8) -14611 FBgn0031449 FBgn0031449 FBtr0077708 CG31689 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5174 chr2R 11338136 11338408 + 14 NA intron (FBgn0263980, intron 1 of 4) protein_coding-intron (FBgn0263980, intron 11 of 14) -22744 FBgn0085217 FBgn0085217 FBtr0112381 CG34188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10370 chr3R 11690182 11690504 + 14 NA intron (FBgn0051183, intron 3 of 7) protein_coding-intron (FBgn0051183, intron 3 of 7) 4425 FBgn0038377 FBgn0038377 FBtr0083186 CG9632 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12314 chr3R 25207983 25208126 + 14 NA intron (FBgn0004369, intron 1 of 18) protein_coding-intron (FBgn0004369, intron 1 of 18) -62718 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7447 chr3L 8796950 8797015 + 14 NA promoter-TSS (FBgn0085456) protein_coding-promoter-TSS (FBgn0085456) 300 FBgn0052023 FBgn0052023 FBtr0076588 CG32023 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_957 chr2L 7100337 7100459 + 14 NA exon (FBgn0085407, exon 5 of 6) protein_coding-exon (FBgn0085407, exon 5 of 6) -15764 FBgn0031888 FBgn0031888 FBtr0079423 Pvf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9677 chr3R 6254897 6255086 + 14 NA Intergenic Intergenic -5520 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_252 chr2L 1415770 1415887 + 14 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 4621 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11920 chr3R 23569743 23569815 + 14 NA exon (FBgn0005659, exon 2 of 5) protein_coding-exon (FBgn0005659, exon 2 of 5) 7517 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5088 chr2R 10611546 10611669 + 14 NA Intergenic Intergenic -10480 FBgn0020269 FBgn0020269 FBtr0087477 mspo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10143 chr3R 9772354 9772494 + 14 NA promoter-TSS (FBgn0038189) protein_coding-promoter-TSS (FBgn0038189) -890 FBgn0038189 FBgn0038189 FBtr0082878 Art6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6329 chr2RHet 244573 244696 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1257 chr2L 8879802 8880017 + 14 NA Intergenic Intergenic -11580 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11903 chr3R 23478717 23478901 + 14 NA exon (FBgn0027494, exon 1 of 1) protein_coding-exon (FBgn0027494, exon 1 of 1) 327 FBgn0027494 FBgn0027494 FBtr0085194 RpS10a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13540 chrX 5235784 5235883 + 14 NA intron (FBgn0029761, intron 2 of 14) protein_coding-intron (FBgn0029761, intron 2 of 10) 1564 FBgn0029761 FBgn0029761 FBtr0301952 SK protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13643 chrX 10366799 10366941 + 14 NA intron (FBgn0261710, intron 1 of 5) protein_coding-intron (FBgn0261710, intron 1 of 5) 750 FBgn0261710 FBgn0261710 FBtr0307488 nocte protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5743 chr2R 16422224 16422307 + 14 NA TTS (FBgn0050154) protein_coding-TTS (FBgn0050154) 248 FBgn0034512 FBgn0034512 FBtr0086216 CG18067 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11426 chr3R 20475748 20475879 + 14 NA promoter-TSS (FBgn0000139) protein_coding-promoter-TSS (FBgn0000139) -48 FBgn0039214 FBgn0039214 FBtr0084667 CG5794 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6716 chr3L 428866 428955 + 14 NA Intergenic Intergenic 4996 FBgn0035139 FBgn0035139 FBtr0072566 CG13891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4332 chr2R 4734926 4735144 + 14 NA intron (FBgn0024189, intron 21 of 21) protein_coding-intron (FBgn0024189, intron 20 of 20) -12834 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12359 chr3R 25387712 25387842 + 14 NA intron (FBgn0000492, intron 1 of 1) protein_coding-intron (FBgn0000492, intron 1 of 1) 5668 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6296 chr2RHet 29365 29474 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8091 chr3L 14865187 14865416 + 14 NA intron (FBgn0036454, intron 11 of 18) protein_coding-intron (FBgn0036454, intron 11 of 18) 22215 FBgn0085274 FBgn0085274 FBtr0302580 CG34245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7540 chr3L 10116777 10116946 + 14 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -22880 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3627 chr2L 22153408 22153582 + 14 NA promoter-TSS (FBgn0261802) protein_coding-promoter-TSS (FBgn0261802) 1741 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11358 chr3R 19094780 19094951 + 14 NA exon (FBgn0004882, exon 4 of 10) protein_coding-exon (FBgn0004882, exon 4 of 10) 1167 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11184 chr3R 17106120 17106190 + 14 NA exon (FBgn0038880, exon 5 of 6) protein_coding-exon (FBgn0038880, exon 5 of 6) -2764 FBgn0038879 FBgn0038879 FBtr0084056 CG17298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4133 chr2R 3220540 3220709 + 14 NA intron (FBgn0033159, intron 9 of 23) protein_coding-intron (FBgn0033159, intron 9 of 23) 21711 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7163 chr3L 6227916 6228052 + 14 NA promoter-TSS (FBgn0261631) protein_coding-promoter-TSS (FBgn0261631) -828 FBgn0261631 FBgn0261631 FBtr0302996 CG42714 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12651 chr3R 26997955 26998172 + 14 NA TTS (FBgn0013973) protein_coding-TTS (FBgn0013973) -3238 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6150 chr2R 19893115 19893272 + 14 NA exon (FBgn0053519, exon 11 of 35) protein_coding-exon (FBgn0053519, exon 11 of 35) 8191 FBgn0053519 FBgn0053519 FBtr0091464 Unc-89 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9396 chr3R 3712754 3712838 + 14 NA promoter-TSS (FBgn0037526) protein_coding-promoter-TSS (FBgn0037526) 29 FBgn0037526 FBgn0037526 FBtr0081752 CG10092 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10544 chr3R 12681755 12681854 + 14 NA promoter-TSS (FBgn0262462) pre_miRNA-promoter-TSS (FBgn0262462) 217 FBgn0262290 FBgn0262290 FBtr0304423 mir-iab-8 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4299 chr2R 4597766 4597949 + 14 NA promoter-TSS (FBgn0033324) protein_coding-promoter-TSS (FBgn0033324) 589 FBgn0043576 FBgn0043576 FBtr0088707 PGRP-SC1a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_893 chr2L 6540700 6540789 + 14 NA intron (FBgn0000320, intron 1 of 4) protein_coding-intron (FBgn0000320, intron 1 of 4) -10235 FBgn0000320 FBgn0000320 FBtr0306113 eya protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12840 chr3RHet 629593 629704 + 14 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10204 chr3R 10353286 10353364 + 14 NA intron (FBgn0038237, intron 3 of 13) protein_coding-intron (FBgn0038237, intron 3 of 13) 6554 FBgn0038236 FBgn0038236 FBtr0082954 Cyp313a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9005 chr3R 808483 808601 + 14 NA exon (FBgn0037291, exon 1 of 2) protein_coding-exon (FBgn0037291, exon 1 of 2) 555 FBgn0263455 FBgn0263455 FBtr0309311 CR43478 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7570 chr3L 10595409 10595492 + 14 NA Intergenic Intergenic 21226 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2380 chr2L 15994894 15994984 + 14 NA Intergenic Intergenic 5183 FBgn0263331 FBgn0263331 FBtr0308754 CR43412 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9913 chr3R 8090043 8090239 + 14 NA intron (FBgn0003651, intron 1 of 4) protein_coding-intron (FBgn0003651, intron 1 of 4) -6471 FBgn0038009 FBgn0038009 FBtr0082565 CG17738 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6797 chr3L 1130008 1130175 + 14 NA Intergenic Intergenic -29002 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9235 chr3R 2624654 2624933 + 14 NA intron (FBgn0000439, intron 3 of 4) protein_coding-intron (FBgn0000439, intron 3 of 4) 7235 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10744 chr3R 14037674 14037782 + 14 NA intron (FBgn0028499, intron 1 of 3) protein_coding-intron (FBgn0028499, intron 1 of 3) -4128 FBgn0038581 FBgn0038581 FBtr0083560 CG14314 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2389 chr2L 16026926 16027066 + 14 NA intron (FBgn0028644, intron 2 of 7) protein_coding-intron (FBgn0028644, intron 2 of 7) -17556 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8607 chr3L 20569559 20569670 + 14 NA Intergenic Intergenic -36097 FBgn0037012 FBgn0037012 FBtr0078213 Rcd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12176 chr3R 24546682 24546947 + 14 NA exon (FBgn0027655, exon 20 of 29) protein_coding-exon (FBgn0027655, exon 20 of 29) 23671 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2077 chr2L 14766248 14766430 + 14 NA exon (FBgn0028868, exon 1 of 1) protein_coding-exon (FBgn0028868, exon 1 of 1) 431 FBgn0028868 FBgn0028868 FBtr0080672 CG4701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6880 chr3L 1934912 1935109 + 14 NA exon (FBgn0035293, exon 5 of 7) protein_coding-exon (FBgn0035293, exon 5 of 7) 3730 FBgn0035293 FBgn0035293 FBtr0072858 CG5687 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12662 chr3R 27033490 27033707 + 13 NA intron (FBgn0000313, intron 5 of 14) protein_coding-intron (FBgn0000313, intron 5 of 14) 2854 FBgn0000313 FBgn0000313 FBtr0330101 chp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11248 chr3R 17581400 17581515 + 13 NA exon (FBgn0051198, exon 3 of 5) protein_coding-exon (FBgn0051198, exon 3 of 5) 1411 FBgn0051198 FBgn0051198 FBtr0084128 CG31198 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8186 chr3L 15921081 15921252 + 13 NA exon (FBgn0000489, exon 6 of 9) protein_coding-exon (FBgn0000489, exon 6 of 9) -3205 FBgn0036544 FBgn0036544 FBtr0334071 sff protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12257 chr3R 24904663 24904785 + 13 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 15174 FBgn0039633 FBgn0039633 FBtr0330300 CG11873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3801 chr2L 22681640 22681737 + 13 NA Intergenic Intergenic 9320 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11360 chr3R 19100012 19100272 + 13 NA intron (FBgn0004882, intron 2 of 9) protein_coding-intron (FBgn0004882, intron 2 of 9) -4110 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6208 chr2R 20356788 20356969 + 13 NA intron (FBgn0035010, intron 1 of 8) protein_coding-intron (FBgn0035010, intron 1 of 8) -3357 FBgn0035007 FBgn0035007 FBtr0072294 CG3492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5513 chr2R 14475644 14475732 + 13 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 23572 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2544 chr2L 16927695 16927792 + 13 NA Intergenic Intergenic -17434 FBgn0026150 FBgn0026150 FBtr0304931 ApepP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5050 chr2R 10317589 10317709 + 13 NA intron (FBgn0013725, intron 1 of 1) protein_coding-intron (FBgn0013725, intron 1 of 1) 2191 FBgn0013725 FBgn0013725 FBtr0087516 phyl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1316 chr2L 9085299 9085490 + 13 NA intron (FBgn0032095, intron 1 of 3) protein_coding-intron (FBgn0032095, intron 1 of 3) 1287 FBgn0032095 FBgn0032095 FBtr0079768 Toll-4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4746 chr2R 7759027 7759209 + 13 NA exon (FBgn0033661, exon 8 of 13) protein_coding-exon (FBgn0033661, exon 8 of 13) 4670 FBgn0260437 FBgn0260437 FBtr0300860 CR42532 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11559 chr3R 21975509 21975673 + 13 NA Intergenic Intergenic 16715 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4877 chr2R 8857315 8857419 + 13 NA exon (FBgn0005624, exon 5 of 5) protein_coding-exon (FBgn0005624, exon 5 of 5) 11127 FBgn0005624 FBgn0005624 FBtr0087798 Psc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8015 chr3L 14130324 14130685 + 13 NA Intergenic Intergenic -6107 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10249 chr3R 10804914 10805067 + 13 NA Intergenic Intergenic -35502 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9537 chr3R 4900974 4901148 + 13 NA intron (FBgn0003165, intron 3 of 5) protein_coding-intron (FBgn0003165, intron 10 of 12) 10156 FBgn0037661 FBgn0037661 FBtr0081971 Ada protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10976 chr3R 15617106 15617262 + 13 NA TTS (FBgn0051215) tRNA-TTS (FBgn0051215) 490 FBgn0051215 FBgn0051215 FBtr0083793 tRNA:CR31215 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1702 chr2L 12757297 12757422 + 13 NA Intergenic Intergenic 4481 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7541 chr3L 10119569 10119657 + 13 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 25213 FBgn0086076 FBgn0086076 FBtr0114352 snoRNA:MeU2-A31 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_11765 chr3R 22875344 22875485 + 13 NA exon (FBgn0029170, exon 2 of 3) protein_coding-exon (FBgn0029170, exon 2 of 3) 472 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9636 chr3R 5800582 5800654 + 13 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 11164 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11940 chr3R 23633223 23633340 + 13 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -37530 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3145 chr2L 20043997 20044079 + 13 NA intron (FBgn0032840, intron 1 of 4) protein_coding-intron (FBgn0032840, intron 1 of 4) 16123 FBgn0032840 FBgn0032840 FBtr0081327 sNPF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6188 chr2R 20239357 20239411 + 13 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) 8995 FBgn0004101 FBgn0004101 FBtr0072271 bs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3570 chr2L 22016815 22016987 + 13 NA exon (FBgn0051693, exon 1 of 1) protein_coding-exon (FBgn0051693, exon 1 of 1) 1670 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7758 chr3L 12310609 12310775 + 13 NA Intergenic Intergenic -11640 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12049 chr3R 24055522 24055590 + 13 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 33788 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_878 chr2L 6358885 6359023 + 13 NA promoter-TSS (FBgn0031804) protein_coding-promoter-TSS (FBgn0031804) -719 FBgn0031804 FBgn0031804 FBtr0079280 CG9500 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3686 chr2L 22320898 22321017 + 13 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -19665 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_13434 chrX 1330125 1330192 + 13 NA exon (FBgn0259108, exon 6 of 8) protein_coding-exon (FBgn0259108, exon 6 of 8) -16578 FBgn0027796 FBgn0027796 FBtr0300224 Gr2a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8296 chr3L 16755764 16755825 + 13 NA Intergenic Intergenic -3378 FBgn0004108 FBgn0004108 FBtr0075323 Nrt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9722 chr3R 6498732 6498909 + 13 NA Intergenic Intergenic 4072 FBgn0037818 FBgn0037818 FBtr0082323 CG6465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11633 chr3R 22274558 22274612 + 13 NA promoter-TSS (FBgn0042711) protein_coding-promoter-TSS (FBgn0042711) -216 FBgn0042711 FBgn0042711 FBtr0085010 Hex-t1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9551 chr3R 5098840 5098961 + 13 NA Intergenic Intergenic 6146 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10511 chr3R 12503494 12503548 + 13 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -22032 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10064 chr3R 9252781 9252952 + 13 NA exon (FBgn0000046, exon 2 of 2) protein_coding-exon (FBgn0000046, exon 2 of 2) 697 FBgn0000046 FBgn0000046 FBtr0082786 Act87E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1106 chr2L 8581925 8582122 + 13 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 11135 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_517 chr2L 3562816 3562870 + 13 NA Intergenic Intergenic -12507 FBgn0264370 FBgn0264370 FBtr0332221 CR43822 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8032 chr3L 14256005 14256128 + 13 NA Intergenic Intergenic -11377 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1401 chr2L 9986803 9986946 + 13 NA exon (FBgn0000180, exon 2 of 5) protein_coding-exon (FBgn0000180, exon 2 of 5) -2131 FBgn0040965 FBgn0040965 FBtr0079974 CG13130 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10897 chr3R 15113431 15113667 + 13 NA promoter-TSS (FBgn0263405) ncRNA-promoter-TSS (FBgn0263405) -530 FBgn0263405 FBgn0263405 FBtr0309184 CR43451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4237 chr2R 4090898 4091230 + 13 NA intron (FBgn0053087, intron 2 of 22) protein_coding-intron (FBgn0053087, intron 2 of 22) 2147 FBgn0033275 FBgn0033275 FBtr0088804 CG14756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2036 chr2L 14603769 14604148 + 13 NA exon (FBgn0003016, exon 6 of 11) protein_coding-exon (FBgn0003016, exon 6 of 11) 4284 FBgn0028910 FBgn0028910 FBtr0080647 tRNA:P:35Bc tRNA Nup98-S2-pascual-garcia2017_R1_peak_4184 chr2R 3613989 3614072 + 13 NA promoter-TSS (FBgn0042135) protein_coding-promoter-TSS (FBgn0042135) 9094 FBgn0042135 FBgn0042135 FBtr0330328 CG18812 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12913 chr4 127776 127900 + 13 NA intron (FBgn0085432, intron 13 of 13) protein_coding-intron (FBgn0085432, intron 12 of 12) 22240 FBgn0011747 FBgn0011747 FBtr0089173 Ank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10919 chr3R 15291446 15291586 + 13 NA intron (FBgn0260003, intron 2 of 35) protein_coding-intron (FBgn0260003, intron 2 of 34) 2261 FBgn0260003 FBgn0260003 FBtr0110916 Dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_753 chr2L 5408286 5408463 + 13 NA intron (FBgn0016660, intron 3 of 5) protein_coding-intron (FBgn0016660, intron 3 of 5) 4032 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_273 chr2L 1472353 1472423 + 13 NA Intergenic Intergenic -19907 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3377 chr2L 21303848 21303951 + 13 NA exon (FBgn0032940, exon 1 of 10) protein_coding-exon (FBgn0032940, exon 1 of 10) 6133 FBgn0032940 FBgn0032940 FBtr0301457 Mio protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8959 chr3R 434589 434643 + 13 NA Intergenic Intergenic -13608 FBgn0087012 FBgn0087012 FBtr0301885 5-HT2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6640 chr2RHet 2274533 2274610 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4179 chr2R 3477649 3477711 + 13 NA promoter-TSS (FBgn0261385) protein_coding-promoter-TSS (FBgn0261385) 56 FBgn0261385 FBgn0261385 FBtr0100216 scra protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8602 chr3L 20410406 20410480 + 13 NA intron (FBgn0036985, intron 2 of 3) protein_coding-intron (FBgn0036985, intron 2 of 3) 3739 FBgn0036985 FBgn0036985 FBtr0078191 zye protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5047 chr2R 10288648 10288726 + 13 NA Intergenic Intergenic 10390 FBgn0033934 FBgn0033934 FBtr0087517 CG17385 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3020 chr2L 19334970 19335024 + 13 NA Intergenic Intergenic 28227 FBgn0024245 FBgn0024245 FBtr0081224 dnt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3745 chr2L 22538886 22539113 + 13 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 66517 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7897 chr3L 13327213 13327345 + 13 NA Intergenic Intergenic 5044 FBgn0040814 FBgn0040814 FBtr0075837 CG14113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6805 chr3L 1184587 1184641 + 13 NA Intergenic Intergenic -4976 FBgn0035186 FBgn0035186 FBtr0072625 CG13912 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4918 chr2R 9185391 9185580 + 13 NA exon (FBgn0033826, exon 1 of 3) protein_coding-exon (FBgn0033826, exon 1 of 3) 487 FBgn0033826 FBgn0033826 FBtr0087754 CG4734 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11761 chr3R 22867006 22867152 + 13 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -7863 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1196 chr2L 8790844 8791052 + 13 NA Intergenic Intergenic -8454 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11598 chr3R 22156467 22156638 + 13 NA intron (FBgn0053970, intron 1 of 8) protein_coding-intron (FBgn0053970, intron 1 of 8) -5555 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_655 chr2L 4498538 4498638 + 13 NA exon (FBgn0053196, exon 66 of 82) protein_coding-exon (FBgn0053196, exon 66 of 82) -21564 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_147 chr2L 1017499 1017575 + 13 NA exon (FBgn0031294, exon 5 of 11) protein_coding-exon (FBgn0031294, exon 5 of 11) 9353 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3189 chr2L 20371694 20371830 + 13 NA TTS (FBgn0026756) protein_coding-TTS (FBgn0026756) 2205 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6834 chr3L 1442355 1442409 + 13 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 3 of 7) -4510 FBgn0043865 FBgn0043865 FBtr0301788 SA-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9812 chr3R 7192283 7192504 + 13 NA intron (FBgn0004595, intron 2 of 7) protein_coding-intron (FBgn0004595, intron 2 of 7) -13540 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2169 chr2L 15127271 15127831 + 13 NA Intergenic Intergenic -2150 FBgn0264436 FBgn0264436 FBtr0332516 CR43854 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7002 chr3L 3530566 3530620 + 13 NA intron (FBgn0005640, intron 1 of 10) protein_coding-intron (FBgn0005640, intron 1 of 10) 14842 FBgn0005640 FBgn0005640 FBtr0110924 Eip63E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3656 chr2L 22213641 22213742 + 13 NA exon (FBgn0259683, exon 2 of 7) protein_coding-exon (FBgn0259683, exon 2 of 7) 574 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_378 chr2L 2267055 2267238 + 13 NA Intergenic Intergenic -1825 FBgn0054049 FBgn0054049 FBtr0302372 CG34049 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2700 chr2L 17583856 17584057 + 13 NA Intergenic Intergenic -6184 FBgn0032651 FBgn0032651 FBtr0303253 Oli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10278 chr3R 11203983 11204141 + 13 NA intron (FBgn0262483, intron 1 of 18) protein_coding-intron (FBgn0262483, intron 1 of 18) 3133 FBgn0262483 FBgn0262483 FBtr0304828 Rbp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8935 chr3LHet 2540156 2540405 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9032 chr3R 1033310 1033383 + 13 NA intron (FBgn0259212, intron 1 of 19) protein_coding-intron (FBgn0259212, intron 1 of 16) 9801 FBgn0259212 FBgn0259212 FBtr0299710 cno protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11820 chr3R 23185911 23186054 + 13 NA intron (FBgn0260487, intron 1 of 6) protein_coding-intron (FBgn0260487, intron 1 of 6) 870 FBgn0260487 FBgn0260487 FBtr0309307 CG42534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6163 chr2R 20106503 20106696 + 13 NA intron (FBgn0050419, intron 1 of 1) protein_coding-intron (FBgn0050419, intron 1 of 1) 10712 FBgn0050419 FBgn0050419 FBtr0072275 CG30419 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4515 chr2R 6101475 6101624 + 13 NA intron (FBgn0000448, intron 1 of 8) protein_coding-intron (FBgn0000448, intron 1 of 8) 13909 FBgn0000448 FBgn0000448 FBtr0306346 Hr46 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5457 chr2R 13992622 13992811 + 13 NA exon (FBgn0034301, exon 2 of 5) protein_coding-exon (FBgn0034301, exon 2 of 5) 3175 FBgn0034301 FBgn0034301 FBtr0330001 CG5756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10335 chr3R 11454436 11454548 + 13 NA Intergenic Intergenic -6698 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4310 chr2R 4642905 4642971 + 13 NA intron (FBgn0027585, intron 4 of 8) protein_coding-intron (FBgn0027585, intron 3 of 7) 18063 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12987 chr4 946720 947169 + 13 NA exon (FBgn0023213, exon 4 of 16) protein_coding-exon (FBgn0023213, exon 4 of 16) 4403 FBgn0023213 FBgn0023213 FBtr0289951 eIF4G protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7025 chr3L 4071661 4071844 + 13 NA promoter-TSS (FBgn0024179) protein_coding-promoter-TSS (FBgn0024179) -35 FBgn0024179 FBgn0024179 FBtr0330072 wit protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4437 chr2R 5421774 5421859 + 13 NA exon (FBgn0259246, exon 17 of 22) protein_coding-exon (FBgn0259246, exon 17 of 22) 13824 FBgn0033421 FBgn0033421 FBtr0088547 CG1888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6713 chr3L 393757 394134 + 13 NA exon (FBgn0264700, exon 1 of 1) ncRNA-exon (FBgn0264700, exon 1 of 1) 351 FBgn0264700 FBgn0264700 FBtr0333900 CR43969 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2299 chr2L 15581124 15581612 + 13 NA intron (FBgn0028370, intron 3 of 3) protein_coding-intron (FBgn0028370, intron 3 of 3) 28645 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2244 chr2L 15418306 15418402 + 13 NA Intergenic Intergenic 7231 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11848 chr3R 23253137 23253450 + 13 NA intron (FBgn0016061, intron 1 of 17) protein_coding-intron (FBgn0016061, intron 1 of 16) 9911 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3629 chr2L 22156325 22156446 + 13 NA intron (FBgn0261802, intron 6 of 8) protein_coding-intron (FBgn0261802, intron 6 of 7) 4631 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10302 chr3R 11275399 11275673 + 13 NA intron (FBgn0038341, intron 1 of 16) protein_coding-intron (FBgn0038341, intron 1 of 16) 9826 FBgn0000047 FBgn0000047 FBtr0083143 Act88F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6633 chr2RHet 2262160 2262292 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10393 chr3R 11886655 11886753 + 13 NA TTS (FBgn0027948) protein_coding-TTS (FBgn0027948) 6530 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12706 chr3R 27206411 27206593 + 13 NA Intergenic Intergenic -3620 FBgn0039844 FBgn0039844 FBtr0085786 CG1607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12003 chr3R 23907568 23907749 + 13 NA intron (FBgn0085391, intron 6 of 9) protein_coding-intron (FBgn0085391, intron 6 of 9) 55324 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6737 chr3L 617706 617875 + 13 NA Intergenic Intergenic -1144 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12712 chr3R 27274329 27274450 + 13 NA intron (FBgn0261988, intron 3 of 12) protein_coding-intron (FBgn0261988, intron 3 of 12) 11202 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1979 chr2L 14431753 14431901 + 13 NA Intergenic Intergenic -6696 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8312 chr3L 16895595 16895697 + 13 NA exon (FBgn0261565, exon 3 of 4) protein_coding-exon (FBgn0261565, exon 3 of 4) 15440 FBgn0261565 FBgn0261565 FBtr0302784 Lmpt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10305 chr3R 11292979 11293059 + 13 NA intron (FBgn0038341, intron 1 of 16) protein_coding-intron (FBgn0038341, intron 1 of 16) 8896 FBgn0038341 FBgn0038341 FBtr0083159 CG14869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9374 chr3R 3567829 3568082 + 13 NA Intergenic Intergenic -2670 FBgn0262899 FBgn0262899 FBtr0310579 CG43254 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12332 chr3R 25267041 25267174 + 13 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -38313 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2387 chr2L 16016590 16016691 + 13 NA intron (FBgn0028644, intron 2 of 7) protein_coding-intron (FBgn0028644, intron 2 of 7) -10361 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9578 chr3R 5142054 5142178 + 13 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -5376 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1839 chr2L 13765739 13765915 + 13 NA Intergenic Intergenic -5260 FBgn0028541 FBgn0028541 FBtr0080532 TM9SF4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4961 chr2R 9547554 9547882 + 13 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 3385 FBgn0033862 FBgn0033862 FBtr0087651 CG6209 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12746 chr3R 27471113 27471213 + 13 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) 23305 FBgn0039862 FBgn0039862 FBtr0330107 kek6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9342 chr3R 3231568 3231747 + 13 NA promoter-TSS (FBgn0037501) protein_coding-promoter-TSS (FBgn0037501) -847 FBgn0037501 FBgn0037501 FBtr0081531 Ir84a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11262 chr3R 17656505 17656600 + 13 NA Intergenic Intergenic -1673 FBgn0041229 FBgn0041229 FBtr0084133 Gr93a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1400 chr2L 9986455 9986509 + 13 NA intron (FBgn0000180, intron 1 of 4) protein_coding-intron (FBgn0000180, intron 1 of 4) -1739 FBgn0040965 FBgn0040965 FBtr0079974 CG13130 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7471 chr3L 9029043 9029161 + 13 NA Intergenic Intergenic -5827 FBgn0028789 FBgn0028789 FBtr0331548 Doc1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12722 chr3R 27326797 27326877 + 13 NA intron (FBgn0039851, intron 1 of 6) protein_coding-intron (FBgn0039851, intron 1 of 6) 1876 FBgn0039851 FBgn0039851 FBtr0085790 mey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1294 chr2L 9013716 9013923 + 13 NA TTS (FBgn0032088) protein_coding-TTS (FBgn0032088) 251 FBgn0032089 FBgn0032089 FBtr0079779 Rcd-1r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3039 chr2L 19503222 19503450 + 13 NA exon (FBgn0032796, exon 3 of 3) protein_coding-exon (FBgn0032796, exon 3 of 3) 5168 FBgn0040268 FBgn0040268 FBtr0081246 Top3alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_111 chr2L 917626 917680 + 13 NA exon (FBgn0046113, exon 11 of 11) protein_coding-exon (FBgn0046113, exon 11 of 11) 3567 FBgn0046113 FBgn0046113 FBtr0273244 GluRIIC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5666 chr2R 15867325 15867596 + 13 NA intron (FBgn0034479, intron 1 of 3) protein_coding-intron (FBgn0034479, intron 1 of 3) 711 FBgn0034479 FBgn0034479 FBtr0305676 CG8654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4578 chr2R 6556239 6556293 + 13 NA Intergenic Intergenic -4584 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_366 chr2L 2074329 2074446 + 13 NA intron (FBgn0053516, intron 2 of 7) protein_coding-intron (FBgn0053516, intron 2 of 7) -5590 FBgn0031388 FBgn0031388 FBtr0077827 CG12674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9902 chr3R 8024665 8024794 + 13 NA exon (FBgn0037995, exon 2 of 2) protein_coding-exon (FBgn0037995, exon 2 of 2) 1066 FBgn0037995 FBgn0037995 FBtr0082545 CG3809 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8939 chr3R 7903 7957 + 13 NA exon (FBgn0037213, exon 3 of 4) protein_coding-exon (FBgn0037213, exon 3 of 4) -4755 FBgn0053294 FBgn0053294 FBtr0308945 CR33294 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_9444 chr3R 4111774 4111911 + 13 NA Intergenic Intergenic -1819 FBgn0037562 FBgn0037562 FBtr0081829 CG11671 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2363 chr2L 15938456 15938608 + 13 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) -2909 FBgn0028857 FBgn0028857 FBtr0300613 CG12448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13588 chrX 7188004 7188183 + 13 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -2756 FBgn0025549 FBgn0025549 FBtr0071066 unc-119 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12144 chr3R 24408534 24408616 + 13 NA exon (FBgn0000659, exon 1 of 1) protein_coding-exon (FBgn0000659, exon 1 of 1) 2259 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10913 chr3R 15249946 15250059 + 13 NA exon (FBgn0038706, exon 1 of 1) protein_coding-exon (FBgn0038706, exon 1 of 1) 919 FBgn0038706 FBgn0038706 FBtr0083770 CG3517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10480 chr3R 12333408 12333462 + 13 NA intron (FBgn0259244, intron 1 of 15) protein_coding-intron (FBgn0259244, intron 1 of 16) 4912 FBgn0259244 FBgn0259244 FBtr0299896 CG42342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9003 chr3R 801189 801272 + 13 NA Intergenic Intergenic -6757 FBgn0263455 FBgn0263455 FBtr0309311 CR43478 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2263 chr2L 15482224 15482353 + 13 NA Intergenic Intergenic -2480 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4159 chr2R 3318116 3318454 + 13 NA intron (FBgn0003460, intron 6 of 6) protein_coding-intron (FBgn0003460, intron 6 of 6) -2187 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1066 chr2L 8332610 8332732 + 13 NA exon (FBgn0032022, exon 3 of 3) protein_coding-exon (FBgn0032022, exon 3 of 3) 3623 FBgn0032022 FBgn0032022 FBtr0079603 CG14275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1589 chr2L 11859001 11859259 + 13 NA exon (FBgn0259225, exon 2 of 9) protein_coding-exon (FBgn0259225, exon 2 of 9) 5700 FBgn0261805 FBgn0261805 FBtr0303281 CG42751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8113 chr3L 15048441 15048533 + 13 NA exon (FBgn0036470, exon 1 of 1) protein_coding-exon (FBgn0036470, exon 1 of 1) 610 FBgn0036470 FBgn0036470 FBtr0075631 CG13463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8344 chr3L 17160778 17160874 + 13 NA TTS (FBgn0263381) ncRNA-TTS (FBgn0263381) 863 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3091 chr2L 19750763 19750997 + 13 NA exon (FBgn0032817, exon 6 of 8) protein_coding-exon (FBgn0032817, exon 6 of 8) 5987 FBgn0032817 FBgn0032817 FBtr0081324 CG10631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10858 chr3R 14787623 14787773 + 13 NA intron (FBgn0263983, intron 2 of 14) protein_coding-intron (FBgn0261262, intron 5 of 18) 11780 FBgn0263983 FBgn0263983 FBtr0330024 CG43732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5317 chr2R 12568666 12568730 + 13 NA exon (FBgn0050463, exon 7 of 12) protein_coding-exon (FBgn0050463, exon 7 of 12) 2800 FBgn0050463 FBgn0050463 FBtr0113381 CG30463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_320 chr2L 1624004 1624117 + 13 NA Intergenic Intergenic -9878 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1856 chr2L 13954556 13954619 + 13 NA intron (FBgn0032536, intron 7 of 8) protein_coding-intron (FBgn0032536, intron 7 of 8) -2952 FBgn0261514 FBgn0261514 FBtr0304720 nimA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11083 chr3R 16207698 16207782 + 13 NA exon (FBgn0262869, exon 19 of 20) protein_coding-exon (FBgn0262869, exon 19 of 20) 21710 FBgn0038790 FBgn0038790 FBtr0083884 MtnC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5970 chr2R 18319062 18319226 + 13 NA Intergenic Intergenic 4160 FBgn0034730 FBgn0034730 FBtr0071830 ppk12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3552 chr2L 21979299 21979419 + 13 NA Intergenic Intergenic 13574 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7554 chr3L 10400682 10400784 + 13 NA Intergenic Intergenic 4744 FBgn0264722 FBgn0264722 FBtr0334101 CR43990 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4767 chr2R 7893156 7893210 + 13 NA exon (FBgn0004839, exon 4 of 7) protein_coding-exon (FBgn0004839, exon 4 of 7) 14146 FBgn0004839 FBgn0004839 FBtr0088028 otk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_658 chr2L 4515786 4516021 + 13 NA exon (FBgn0053196, exon 38 of 47) protein_coding-exon (FBgn0053196, exon 38 of 47) -38879 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6791 chr3L 1106963 1107037 + 13 NA Intergenic Intergenic -5911 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7401 chr3L 8382396 8382527 + 13 NA exon (FBgn0001253, exon 5 of 7) protein_coding-exon (FBgn0001253, exon 5 of 7) -2179 FBgn0035886 FBgn0035886 FBtr0076608 Jon66Ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9620 chr3R 5645427 5645499 + 13 NA TTS (FBgn0262104) protein_coding-TTS (FBgn0262104) 136 FBgn0037765 FBgn0037765 FBtr0082152 CG9458 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3335 chr2L 21067048 21067257 + 13 NA intron (FBgn0032910, intron 1 of 7) protein_coding-intron (FBgn0032910, intron 1 of 7) 3129 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4585 chr2R 6581640 6581723 + 13 NA intron (FBgn0024836, intron 2 of 5) protein_coding-intron (FBgn0024836, intron 2 of 5) 20831 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10501 chr3R 12428233 12428355 + 13 NA intron (FBgn0027562, intron 1 of 6) protein_coding-intron (FBgn0027562, intron 1 of 6) 2216 FBgn0027562 FBgn0027562 FBtr0083360 CG10345 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3836 chr2L 22893156 22893315 + 13 NA exon (FBgn0250907, exon 9 of 9) protein_coding-exon (FBgn0250907, exon 9 of 9) 18701 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11871 chr3R 23334155 23334303 + 13 NA Intergenic Intergenic -5551 FBgn0039521 FBgn0039521 FBtr0085213 CG5402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1119 chr2L 8609266 8609522 + 13 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -10634 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9897 chr3R 8002608 8002716 + 13 NA Intergenic Intergenic -10754 FBgn0261714 FBgn0261714 FBtr0082548 Cpn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11399 chr3R 19779723 19779777 + 13 NA exon (FBgn0005674, exon 5 of 6) protein_coding-exon (FBgn0005674, exon 5 of 6) 1471 FBgn0005674 FBgn0005674 FBtr0084512 Aats-glupro protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2881 chr2L 18308652 18308883 + 13 NA promoter-TSS (FBgn0263085) protein_coding-promoter-TSS (FBgn0263085) -83 FBgn0263085 FBgn0263085 FBtr0307102 CG43353 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1286 chr2L 8935199 8935388 + 13 NA exon (FBgn0032074, exon 3 of 4) protein_coding-exon (FBgn0032074, exon 3 of 4) 1230 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1906 chr2L 14270077 14270131 + 13 NA intron (FBgn0261563, intron 1 of 12) protein_coding-intron (FBgn0261563, intron 1 of 15) -4691 FBgn0052971 FBgn0052971 FBtr0080621 CG32971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_924 chr2L 6804735 6804930 + 13 NA TTS (FBgn0031860) protein_coding-TTS (FBgn0031860) 960 FBgn0031861 FBgn0031861 FBtr0309813 CG17375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1891 chr2L 14137797 14137881 + 13 NA intron (FBgn0028906, intron 1 of 4) protein_coding-intron (FBgn0028906, intron 1 of 4) 3348 FBgn0028906 FBgn0028906 FBtr0305557 CG17341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3615 chr2L 22086553 22086698 + 13 NA Intergenic Intergenic 6953 FBgn0032971 FBgn0032971 FBtr0085935 ttm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2813 chr2L 17992698 17992822 + 13 NA Intergenic Intergenic 2342 FBgn0051742 FBgn0051742 FBtr0081025 CG31742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7927 chr3L 13548040 13548136 + 13 NA intron (FBgn0264001, intron 7 of 13) protein_coding-intron (FBgn0264001, intron 6 of 12) -35383 FBgn0036377 FBgn0036377 FBtr0075817 CG10710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11610 chr3R 22182875 22183035 + 13 NA intron (FBgn0053970, intron 3 of 4) protein_coding-intron (FBgn0053970, intron 7 of 8) 1745 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12073 chr3R 24139020 24139171 + 13 NA Intergenic Intergenic -8768 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9408 chr3R 3821721 3821912 + 13 NA promoter-TSS (FBgn0037534) protein_coding-promoter-TSS (FBgn0037534) -248 FBgn0037534 FBgn0037534 FBtr0081823 CG2781 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1010 chr2L 7756360 7756651 + 13 NA exon (FBgn0031943, exon 1 of 1) protein_coding-exon (FBgn0031943, exon 1 of 1) 188 FBgn0031943 FBgn0031943 FBtr0079484 CG14538 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13437 chrX 1382643 1382837 + 13 NA exon (FBgn0053513, exon 10 of 10) protein_coding-exon (FBgn0053513, exon 10 of 10) -5687 FBgn0003517 FBgn0003517 FBtr0070291 sta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8051 chr3L 14445106 14445259 + 13 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) 41456 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3078 chr2L 19701785 19701904 + 13 NA promoter-TSS (FBgn0005590) protein_coding-promoter-TSS (FBgn0005590) -876 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7539 chr3L 10115811 10115936 + 13 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -21892 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12656 chr3R 27008488 27008580 + 13 NA intron (FBgn0051004, intron 9 of 14) protein_coding-intron (FBgn0051004, intron 9 of 15) -10412 FBgn0004389 FBgn0004389 FBtr0085754 bnk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_75 chr2L 757828 757931 + 13 NA TTS (FBgn0031275) protein_coding-TTS (FBgn0031275) 7270 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7413 chr3L 8490803 8490930 + 13 NA intron (FBgn0262719, intron 1 of 6) protein_coding-intron (FBgn0262719, intron 1 of 6) 9380 FBgn0262719 FBgn0262719 FBtr0308608 CG43163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8412 chr3L 17591360 17591517 + 13 NA exon (FBgn0000567, exon 4 of 8) protein_coding-exon (FBgn0000567, exon 4 of 8) 20987 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2223 chr2L 15334386 15334576 + 13 NA exon (FBgn0001981, exon 1 of 1) protein_coding-exon (FBgn0001981, exon 1 of 1) 617 FBgn0001981 FBgn0001981 FBtr0080734 esg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1284 chr2L 8931293 8931527 + 13 NA exon (FBgn0085427, exon 11 of 11) protein_coding-exon (FBgn0085427, exon 11 of 11) -2653 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4965 chr2R 9563155 9563225 + 13 NA intron (FBgn0000633, intron 3 of 12) protein_coding-intron (FBgn0000633, intron 3 of 12) 7949 FBgn0033864 FBgn0033864 FBtr0087627 CG18368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3774 chr2L 22611123 22611203 + 13 NA exon (FBgn0058006, exon 4 of 10) protein_coding-exon (FBgn0058006, exon 4 of 10) 33364 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13467 chrX 1615391 1615496 + 13 NA Intergenic Intergenic -11247 FBgn0025378 FBgn0025378 FBtr0070278 CG3795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6033 chr2R 18916216 18916402 + 13 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) 14153 FBgn0261705 FBgn0261705 FBtr0303203 CG42741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13701 chrX 13062985 13063089 + 13 NA intron (FBgn0085440, intron 6 of 17) protein_coding-intron (FBgn0085440, intron 6 of 17) -9000 FBgn0052640 FBgn0052640 FBtr0073728 CG32640 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11923 chr3R 23577471 23577525 + 13 NA Intergenic Intergenic 15236 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2490 chr2L 16567868 16568057 + 13 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -18003 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1836 chr2L 13749992 13750165 + 13 NA Intergenic Intergenic -2254 FBgn0262332 FBgn0262332 FBtr0304513 mir-968 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_47 chr2L 654484 654825 + 13 NA exon (FBgn0000497, exon 5 of 12) protein_coding-exon (FBgn0000497, exon 5 of 12) 28991 FBgn0031273 FBgn0031273 FBtr0077999 CG2839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7877 chr3L 13163483 13163646 + 13 NA Intergenic Intergenic -4014 FBgn0086916 FBgn0086916 FBtr0334063 snky protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12301 chr3R 25167148 25167347 + 13 NA Intergenic Intergenic -21911 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8111 chr3L 15046302 15046384 + 13 NA promoter-TSS (FBgn0036468) protein_coding-promoter-TSS (FBgn0036468) 108 FBgn0263763 FBgn0263763 FBtr0310455 CG43680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2997 chr2L 19273018 19273220 + 13 NA Intergenic Intergenic -10226 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6302 chr2RHet 52732 52880 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12691 chr3R 27179772 27179826 + 13 NA intron (FBgn0085376, intron 6 of 7) protein_coding-intron (FBgn0085376, intron 6 of 16) -18350 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12186 chr3R 24574244 24574783 + 13 NA exon (FBgn0039596, exon 7 of 7) protein_coding-exon (FBgn0039596, exon 7 of 7) 2800 FBgn0039596 FBgn0039596 FBtr0085315 CG10000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5002 chr2R 9757617 9757671 + 13 NA exon (FBgn0013733, exon 25 of 31) protein_coding-exon (FBgn0013733, exon 25 of 31) 8127 FBgn0033884 FBgn0033884 FBtr0087586 CG13344 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5749 chr2R 16500793 16500941 + 13 NA exon (FBgn0050147, exon 3 of 9) protein_coding-exon (FBgn0050147, exon 3 of 9) 4835 FBgn0050147 FBgn0050147 FBtr0086256 Hil protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10105 chr3R 9536558 9536650 + 13 NA promoter-TSS (FBgn0051469) protein_coding-promoter-TSS (FBgn0051469) 129 FBgn0040077 FBgn0040077 FBtr0091748 primo-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5066 chr2R 10478763 10479008 + 13 NA intron (FBgn0033943, intron 1 of 3) protein_coding-intron (FBgn0033943, intron 1 of 3) 177 FBgn0033943 FBgn0033943 FBtr0087496 CG12869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12178 chr3R 24549622 24549783 + 13 NA exon (FBgn0027655, exon 22 of 29) protein_coding-exon (FBgn0027655, exon 22 of 29) 20783 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11855 chr3R 23268272 23268440 + 13 NA Intergenic Intergenic 2322 FBgn0263401 FBgn0263401 FBtr0309178 CG43447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5667 chr2R 15869388 15869651 + 13 NA promoter-TSS (FBgn0034479) protein_coding-promoter-TSS (FBgn0034479) 2770 FBgn0034479 FBgn0034479 FBtr0305676 CG8654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8193 chr3L 16009795 16009895 + 13 NA TTS (FBgn0264601) protein_coding-TTS (FBgn0264601) 1572 FBgn0264601 FBgn0264601 FBtr0333621 CG43950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2492 chr2L 16571665 16571813 + 13 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -21780 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1844 chr2L 13869461 13869713 + 13 NA intron (FBgn0028509, intron 1 of 7) protein_coding-intron (FBgn0028509, intron 1 of 7) 20175 FBgn0028532 FBgn0028532 FBtr0080551 CG7968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4415 chr2R 5265970 5266101 + 13 NA intron (FBgn0033405, intron 1 of 7) protein_coding-intron (FBgn0033405, intron 1 of 7) 9724 FBgn0033405 FBgn0033405 FBtr0332997 CG13954 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13625 chrX 9208995 9209148 + 13 NA Intergenic Intergenic 4206 FBgn0040235 FBgn0040235 FBtr0071324 c12.1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3877 chr2LHet 207304 207461 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13734 chrX 13799722 13799776 + 13 NA intron (FBgn0263115, intron 2 of 7) protein_coding-intron (FBgn0263115, intron 1 of 4) -48592 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11521 chr3R 21799724 21799778 + 13 NA intron (FBgn0259146, intron 1 of 2) protein_coding-intron (FBgn0259146, intron 1 of 2) 1457 FBgn0259146 FBgn0259146 FBtr0299575 CG42261 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4917 chr2R 9183384 9183519 + 13 NA promoter-TSS (FBgn0052843) protein_coding-promoter-TSS (FBgn0052843) -22 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3314 chr2L 20932965 20933123 + 13 NA exon (FBgn0032908, exon 4 of 7) protein_coding-exon (FBgn0032908, exon 4 of 7) 1069 FBgn0032908 FBgn0032908 FBtr0306031 CG9270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8627 chr3L 21047978 21048171 + 13 NA intron (FBgn0026179, intron 1 of 5) protein_coding-intron (FBgn0026179, intron 1 of 5) 6748 FBgn0026179 FBgn0026179 FBtr0111038 siz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12785 chr3R 27664833 27664925 + 13 NA intron (FBgn0039883, intron 9 of 10) protein_coding-intron (FBgn0039883, intron 8 of 9) 13313 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12394 chr3R 25494147 25494285 + 13 NA promoter-TSS (FBgn0039677) protein_coding-promoter-TSS (FBgn0039677) 383 FBgn0039676 FBgn0039676 FBtr0332443 ppk20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12541 chr3R 26494340 26494404 + 13 NA Intergenic Intergenic 18689 FBgn0085462 FBgn0085462 FBtr0304711 CG34433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10010 chr3R 8775046 8775248 + 13 NA TTS (FBgn0040493) protein_coding-TTS (FBgn0040493) -12327 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11589 chr3R 22126588 22126730 + 13 NA Intergenic Intergenic 24338 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10864 chr3R 14816822 14816903 + 13 NA intron (FBgn0026239, intron 1 of 6) protein_coding-intron (FBgn0026239, intron 1 of 4) 7115 FBgn0026239 FBgn0026239 FBtr0112924 gukh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10408 chr3R 11915048 11915235 + 13 NA exon (FBgn0026059, exon 8 of 18) protein_coding-exon (FBgn0026059, exon 8 of 18) 3914 FBgn0038398 FBgn0038398 FBtr0083225 sxe2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7690 chr3L 11802947 11803050 + 13 NA exon (FBgn0259140, exon 8 of 17) protein_coding-exon (FBgn0259140, exon 8 of 17) 4857 FBgn0259140 FBgn0259140 FBtr0332131 CG42255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11099 chr3R 16286839 16286942 + 13 NA intron (FBgn0262869, intron 3 of 20) protein_coding-intron (FBgn0262869, intron 3 of 17) 23383 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9440 chr3R 4037092 4037306 + 13 NA Intergenic Intergenic -6501 FBgn0037552 FBgn0037552 FBtr0081795 CG7800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3280 chr2L 20708516 20708745 + 13 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 5786 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1923 chr2L 14304819 14304990 + 13 NA intron (FBgn0261563, intron 1 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -9510 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3654 chr2L 22209556 22209821 + 13 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 4577 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9992 chr3R 8705157 8705280 + 13 NA Intergenic Intergenic -12499 FBgn0038089 FBgn0038089 FBtr0082683 d-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4090 chr2R 2798299 2798447 + 13 NA intron (FBgn0050158, intron 5 of 7) protein_coding-intron (FBgn0050158, intron 5 of 7) -12578 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11624 chr3R 22222789 22222907 + 13 NA Intergenic Intergenic 6530 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12673 chr3R 27092221 27092448 + 13 NA exon (FBgn0039839, exon 3 of 9) protein_coding-exon (FBgn0039839, exon 3 of 9) 882 FBgn0039839 FBgn0039839 FBtr0085764 CG15555 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6341 chr2RHet 441228 441430 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1446 chr2L 10606470 10606607 + 13 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) -24876 FBgn0085190 FBgn0085190 FBtr0112352 CG34161 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5552 chr2R 14881448 14881623 + 13 NA promoter-TSS (FBgn0263473) snoRNA-promoter-TSS (FBgn0263473) -666 FBgn0263473 FBgn0263473 FBtr0309772 snoRNA:abba-a snoRNA Nup98-S2-pascual-garcia2017_R1_peak_2371 chr2L 15965798 15965986 + 13 NA Intergenic Intergenic -3460 FBgn0028645 FBgn0028645 FBtr0300615 beat-Ib protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3596 chr2L 22060619 22060882 + 13 NA Intergenic Intergenic 4530 FBgn0260996 FBgn0260996 FBtr0301799 CG42597 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10342 chr3R 11528258 11528324 + 13 NA Intergenic Intergenic -2126 FBgn0038354 FBgn0038354 FBtr0083165 CG5404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12 chr2L 91507 91561 + 13 NA Intergenic Intergenic -3205 FBgn0031216 FBgn0031216 FBtr0078103 CG11376 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13506 chrX 3232284 3232397 + 13 NA exon (FBgn0000479, exon 13 of 15) protein_coding-exon (FBgn0000479, exon 13 of 15) -21905 FBgn0029656 FBgn0029656 FBtr0070536 CG10793 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2848 chr2L 18123685 18123799 + 13 NA TTS (FBgn0051785) protein_coding-TTS (FBgn0051785) 1196 FBgn0032666 FBgn0032666 FBtr0081037 CG5758 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_640 chr2L 4432026 4432102 + 13 NA intron (FBgn0031602, intron 1 of 3) protein_coding-intron (FBgn0031602, intron 2 of 4) -1844 FBgn0085206 FBgn0085206 FBtr0112368 CG34177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2219 chr2L 15306057 15306244 + 13 NA Intergenic Intergenic 8342 FBgn0028852 FBgn0028852 FBtr0080733 CG15262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10231 chr3R 10672257 10672334 + 13 NA exon (FBgn0038266, exon 1 of 1) protein_coding-exon (FBgn0038266, exon 1 of 1) 1530 FBgn0038266 FBgn0038266 FBtr0082994 CG3610 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_747 chr2L 5398117 5398482 + 13 NA Intergenic Intergenic -6043 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9526 chr3R 4783491 4783584 + 13 NA intron (FBgn0037645, intron 1 of 1) protein_coding-intron (FBgn0037645, intron 1 of 1) 5146 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3768 chr2L 22595154 22595247 + 13 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 49327 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10600 chr3R 13098780 13098834 + 13 NA Intergenic Intergenic -10710 FBgn0051418 FBgn0051418 FBtr0083432 CG31418 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6402 chr2RHet 708834 708921 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10436 chr3R 11996061 11996229 + 13 NA exon (FBgn0063649, exon 8 of 8) protein_coding-exon (FBgn0063649, exon 8 of 8) -1269 FBgn0263449 FBgn0263449 FBtr0309304 CR43472 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4898 chr2R 9008901 9009058 + 13 NA intron (FBgn0033792, intron 1 of 10) protein_coding-intron (FBgn0033792, intron 1 of 10) 5169 FBgn0033792 FBgn0033792 FBtr0087722 CG13325 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1057 chr2L 8246622 8246745 + 13 NA exon (FBgn0032010, exon 10 of 14) protein_coding-exon (FBgn0032010, exon 10 of 14) -2680 FBgn0262359 FBgn0262359 FBtr0304640 CG43057 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12038 chr3R 24034114 24034266 + 13 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 55154 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12215 chr3R 24614604 24614686 + 13 NA promoter-TSS (FBgn0085324) protein_coding-promoter-TSS (FBgn0085324) -694 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5032 chr2R 10162948 10163006 + 13 NA promoter-TSS (FBgn0263397) protein_coding-promoter-TSS (FBgn0263397) 4671 FBgn0261269 FBgn0261269 FBtr0087540 conv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2061 chr2L 14717234 14717361 + 13 NA Intergenic Intergenic 3520 FBgn0085194 FBgn0085194 FBtr0112356 CG34165 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13167 chrU 1367153 1367343 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9036 chr3R 1156442 1156532 + 13 NA intron (FBgn0013576, intron 1 of 14) protein_coding-intron (FBgn0013576, intron 1 of 14) 23982 FBgn0037312 FBgn0037312 FBtr0078807 CG11999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12796 chr3R 27730326 27730516 + 13 NA intron (FBgn0011224, intron 5 of 14) protein_coding-intron (FBgn0011224, intron 4 of 13) 76470 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4831 chr2R 8434557 8434784 + 13 NA TTS (FBgn0053752) protein_coding-TTS (FBgn0053752) 1476 FBgn0053752 FBgn0053752 FBtr0091753 CG33752 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3064 chr2L 19680306 19680469 + 13 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 20581 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2601 chr2L 17093198 17093476 + 13 NA Intergenic Intergenic 5696 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1682 chr2L 12664263 12664366 + 13 NA intron (FBgn0004394, intron 2 of 4) protein_coding-intron (FBgn0004394, intron 2 of 4) 5400 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3201 chr2L 20389798 20390051 + 13 NA intron (FBgn0032857, intron 1 of 1) protein_coding-intron (FBgn0032857, intron 1 of 1) -7569 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6118 chr2R 19574504 19574645 + 13 NA exon (FBgn0034889, exon 2 of 4) protein_coding-exon (FBgn0034889, exon 2 of 4) -1110 FBgn0262728 FBgn0262728 FBtr0301509 Pal2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1245 chr2L 8869286 8869480 + 13 NA Intergenic Intergenic 2616 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2368 chr2L 15946071 15946191 + 13 NA intron (FBgn0028645, intron 1 of 6) protein_coding-intron (FBgn0028645, intron 1 of 6) 4690 FBgn0028857 FBgn0028857 FBtr0300613 CG12448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5896 chr2R 17678015 17678069 + 13 NA exon (FBgn0034660, exon 2 of 4) protein_coding-exon (FBgn0034660, exon 2 of 4) 1118 FBgn0034660 FBgn0034660 FBtr0071745 lox2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13113 chrU 252239 252466 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9088 chr3R 1607236 1607290 + 13 NA promoter-TSS (FBgn0037375) protein_coding-promoter-TSS (FBgn0037375) -221 FBgn0037375 FBgn0037375 FBtr0300738 kat-60L1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12317 chr3R 25219196 25219300 + 13 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -73912 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4997 chr2R 9725278 9725370 + 13 NA exon (FBgn0033874, exon 2 of 3) protein_coding-exon (FBgn0033874, exon 2 of 3) 1398 FBgn0033874 FBgn0033874 FBtr0087637 CG6347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12508 chr3R 26067259 26067420 + 13 NA exon (FBgn0039758, exon 4 of 4) protein_coding-exon (FBgn0039758, exon 4 of 4) 1693 FBgn0039758 FBgn0039758 FBtr0085639 CG9737 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6067 chr2R 19193356 19193561 + 13 NA Intergenic Intergenic 3881 FBgn0034842 FBgn0034842 FBtr0072045 Prosbeta5R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4876 chr2R 8855932 8856026 + 13 NA exon (FBgn0005624, exon 5 of 5) protein_coding-exon (FBgn0005624, exon 5 of 5) 12515 FBgn0005624 FBgn0005624 FBtr0087798 Psc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12079 chr3R 24173433 24173617 + 13 NA Intergenic Intergenic -4439 FBgn0039582 FBgn0039582 FBtr0085288 Or98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5156 chr2R 11123595 11123649 + 13 NA exon (FBgn0259878, exon 3 of 9) protein_coding-exon (FBgn0259878, exon 3 of 9) 5462 FBgn0259878 FBgn0259878 FBtr0087398 Fs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12163 chr3R 24517983 24518262 + 13 NA exon (FBgn0039594, exon 3 of 10) protein_coding-exon (FBgn0039594, exon 3 of 10) -3842 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11635 chr3R 22281721 22281991 + 13 NA promoter-TSS (FBgn0023178) protein_coding-promoter-TSS (FBgn0023178) 7 FBgn0023178 FBgn0023178 FBtr0085024 Pdf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12109 chr3R 24283894 24283976 + 13 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) -26344 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11369 chr3R 19198008 19198106 + 13 NA promoter-TSS (FBgn0262009) protein_coding-promoter-TSS (FBgn0262009) -775 FBgn0262009 FBgn0262009 FBtr0304566 CG42827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11446 chr3R 20825331 20825520 + 13 NA intron (FBgn0039257, intron 2 of 7) protein_coding-intron (FBgn0039257, intron 1 of 6) 15319 FBgn0039257 FBgn0039257 FBtr0305667 tnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12355 chr3R 25380093 25380194 + 13 NA Intergenic Intergenic -1966 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1755 chr2L 12997418 12997537 + 13 NA exon (FBgn0032465, exon 5 of 6) protein_coding-exon (FBgn0032465, exon 5 of 6) 3154 FBgn0032465 FBgn0032465 FBtr0080430 CG12404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9648 chr3R 5897883 5898068 + 13 NA exon (FBgn0041105, exon 1 of 3) protein_coding-exon (FBgn0041105, exon 1 of 3) 1136 FBgn0041105 FBgn0041105 FBtr0330083 nerfin-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10907 chr3R 15224036 15224146 + 13 NA exon (FBgn0051244, exon 1 of 1) protein_coding-exon (FBgn0051244, exon 1 of 1) 198 FBgn0051244 FBgn0051244 FBtr0083772 CG31244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8243 chr3L 16299884 16299938 + 13 NA promoter-TSS (FBgn0036600) protein_coding-promoter-TSS (FBgn0036600) 211 FBgn0036601 FBgn0036601 FBtr0075366 CG13063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12412 chr3R 25525333 25525444 + 13 NA Intergenic Intergenic 7075 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1282 chr2L 8929021 8929229 + 13 NA exon (FBgn0085427, exon 9 of 11) protein_coding-exon (FBgn0085427, exon 9 of 11) -4938 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5748 chr2R 16482479 16482612 + 13 NA intron (FBgn0015907, intron 2 of 9) protein_coding-intron (FBgn0015907, intron 2 of 8) 7535 FBgn0015907 FBgn0015907 FBtr0086222 bl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12371 chr3R 25428830 25428984 + 13 NA intron (FBgn0086361, intron 5 of 6) protein_coding-intron (FBgn0086361, intron 5 of 6) -2323 FBgn0039673 FBgn0039673 FBtr0330294 CG7568 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10030 chr3R 8958288 8958383 + 13 NA exon (FBgn0260793, exon 3 of 4) protein_coding-exon (FBgn0260793, exon 3 of 4) 23051 FBgn0260793 FBgn0260793 FBtr0330143 2mit protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1175 chr2L 8763242 8763296 + 13 NA Intergenic Intergenic 5439 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_42 chr2L 585391 585561 + 13 NA intron (FBgn0010323, intron 3 of 3) protein_coding-intron (FBgn0010323, intron 2 of 2) 7990 FBgn0023489 FBgn0023489 FBtr0078070 Pph13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9682 chr3R 6266754 6267084 + 13 NA Intergenic Intergenic 6408 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11515 chr3R 21789733 21789871 + 13 NA exon (FBgn0000206, exon 3 of 6) protein_coding-exon (FBgn0000206, exon 3 of 6) 2086 FBgn0000206 FBgn0000206 FBtr0084949 boss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10367 chr3R 11640953 11641024 + 13 NA intron (FBgn0026616, intron 1 of 4) protein_coding-intron (FBgn0026616, intron 1 of 4) -10481 FBgn0038366 FBgn0038366 FBtr0083180 CG4576 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4058 chr2R 2477328 2477409 + 13 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 6) 11115 FBgn0033076 FBgn0033076 FBtr0305958 CG15233 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5064 chr2R 10427549 10427852 + 13 NA intron (FBgn0020245, intron 1 of 9) protein_coding-intron (FBgn0020245, intron 1 of 9) 6177 FBgn0050076 FBgn0050076 FBtr0087513 CG30076 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9565 chr3R 5119194 5119269 + 13 NA Intergenic Intergenic 26477 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13213 chrU 2416171 2416319 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12055 chr3R 24061485 24061875 + 13 NA intron (FBgn0085383, intron 6 of 8) protein_coding-intron (FBgn0085383, intron 6 of 8) 27664 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11372 chr3R 19260575 19260685 + 13 NA intron (FBgn0039078, intron 2 of 3) protein_coding-intron (FBgn0039078, intron 2 of 3) -3434 FBgn0039078 FBgn0039078 FBtr0310575 CG4374 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8559 chr3L 19397799 19397904 + 13 NA promoter-TSS (FBgn0264697) ncRNA-promoter-TSS (FBgn0264697) -788 FBgn0264697 FBgn0264697 FBtr0333868 CR43966 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1170 chr2L 8759621 8759872 + 13 NA Intergenic Intergenic 7441 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4014 chr2R 1694010 1694108 + 13 NA intron (FBgn0085414, intron 1 of 9) protein_coding-intron (FBgn0085414, intron 1 of 9) 1840 FBgn0085414 FBgn0085414 FBtr0300553 dpr12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8919 chr3LHet 2155270 2155324 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6584 chr2RHet 1990464 1990636 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2711 chr2L 17613783 17613973 + 13 NA Intergenic Intergenic 12468 FBgn0032654 FBgn0032654 FBtr0080988 CG15147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8272 chr3L 16501068 16501122 + 13 NA exon (FBgn0263131, exon 23 of 31) protein_coding-exon (FBgn0263131, exon 23 of 31) 10344 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_189 chr2L 1239101 1239229 + 13 NA promoter-TSS (FBgn0031327) protein_coding-promoter-TSS (FBgn0031327) -873 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11785 chr3R 23030555 23030729 + 13 NA Intergenic Intergenic -10926 FBgn0004197 FBgn0004197 FBtr0085128 Ser protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10295 chr3R 11248333 11248462 + 13 NA exon (FBgn0038339, exon 5 of 5) protein_coding-exon (FBgn0038339, exon 5 of 5) -4892 FBgn0262397 FBgn0262397 FBtr0304297 mir-2c pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5359 chr2R 13111920 13111984 + 13 NA intron (FBgn0261642, intron 2 of 9) protein_coding-intron (FBgn0261642, intron 2 of 9) 19239 FBgn0262882 FBgn0262882 FBtr0306290 CG43237 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5881 chr2R 17476883 17477098 + 13 NA promoter-TSS (FBgn0053225) protein_coding-promoter-TSS (FBgn0053225) -901 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10553 chr3R 12725633 12725687 + 13 NA exon (FBgn0263610, exon 2 of 8) ncRNA-exon (FBgn0263610, exon 2 of 8) 7528 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9963 chr3R 8565658 8565879 + 13 NA exon (FBgn0038082, exon 1 of 2) protein_coding-exon (FBgn0038082, exon 1 of 2) 384 FBgn0038082 FBgn0038082 FBtr0082657 CG5724 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6604 chr2RHet 2141488 2141684 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8289 chr3L 16732086 16732272 + 13 NA exon (FBgn0036659, exon 4 of 4) protein_coding-exon (FBgn0036659, exon 4 of 4) 5533 FBgn0036659 FBgn0036659 FBtr0075321 CG9701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3979 chr2R 984569 984650 + 13 NA Intergenic Intergenic 5234 FBgn0033005 FBgn0033005 FBtr0111280 CG3107 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5834 chr2R 17291235 17291289 + 13 NA intron (FBgn0010415, intron 2 of 4) protein_coding-intron (FBgn0010415, intron 3 of 5) 13307 FBgn0010415 FBgn0010415 FBtr0301557 Sdc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9910 chr3R 8074170 8074235 + 13 NA Intergenic Intergenic -5707 FBgn0038008 FBgn0038008 FBtr0082561 CG3942 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_506 chr2L 3433084 3433248 + 13 NA Intergenic Intergenic -6524 FBgn0031530 FBgn0031530 FBtr0077592 pgant2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_241 chr2L 1402708 1402830 + 13 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 17680 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_35 chr2L 395364 395426 + 13 NA promoter-TSS (FBgn0263871) ncRNA-promoter-TSS (FBgn0263871) -725 FBgn0263871 FBgn0263871 FBtr0329831 CR43718 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1133 chr2L 8628203 8628276 + 13 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 8211 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1874 chr2L 14050177 14050323 + 13 NA intron (FBgn0028875, intron 2 of 13) protein_coding-intron (FBgn0028875, intron 2 of 13) 2668 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7047 chr3L 4463981 4464035 + 13 NA promoter-TSS (FBgn0040699) protein_coding-promoter-TSS (FBgn0040699) -185 FBgn0040699 FBgn0040699 FBtr0290214 CG15024 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5104 chr2R 10703397 10703529 + 13 NA Intergenic Intergenic 4029 FBgn0033969 FBgn0033969 FBtr0087464 CG10202 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4960 chr2R 9540434 9540868 + 13 NA intron (FBgn0000633, intron 2 of 12) protein_coding-intron (FBgn0000633, intron 2 of 12) 10452 FBgn0033862 FBgn0033862 FBtr0087651 CG6209 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7559 chr3L 10572047 10572184 + 13 NA intron (FBgn0052062, intron 7 of 13) protein_coding-intron (FBgn0052062, intron 7 of 14) -19933 FBgn0036085 FBgn0036085 FBtr0076291 CG6527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2526 chr2L 16810160 16810449 + 13 NA intron (FBgn0086673, intron 1 of 2) protein_coding-intron (FBgn0086673, intron 1 of 2) 5420 FBgn0086673 FBgn0086673 FBtr0080914 CG13272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12503 chr3R 25986609 25986718 + 13 NA promoter-TSS (FBgn0039749) protein_coding-promoter-TSS (FBgn0039749) -468 FBgn0039749 FBgn0039749 FBtr0332535 CG11498 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3129 chr2L 19964901 19965239 + 13 NA TTS (FBgn0042129) protein_coding-TTS (FBgn0042129) 945 FBgn0032836 FBgn0032836 FBtr0081303 CG10680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8304 chr3L 16828398 16828694 + 13 NA Intergenic Intergenic -6372 FBgn0036665 FBgn0036665 FBtr0273320 CG13024 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_198 chr2L 1285609 1285835 + 13 NA intron (FBgn0041097, intron 6 of 11) protein_coding-intron (FBgn0041097, intron 6 of 11) 29296 FBgn0041097 FBgn0041097 FBtr0077921 robo3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12327 chr3R 25250152 25250242 + 13 NA exon (FBgn0004369, exon 6 of 19) protein_coding-exon (FBgn0004369, exon 6 of 19) -55223 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11056 chr3R 16041461 16041611 + 13 NA intron (FBgn0083975, intron 7 of 13) protein_coding-intron (FBgn0083975, intron 7 of 13) -6023 FBgn0038775 FBgn0038775 FBtr0083874 CG17199 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7208 chr3L 6593284 6593553 + 13 NA exon (FBgn0002926, exon 4 of 15) protein_coding-exon (FBgn0002926, exon 4 of 15) 3048 FBgn0002926 FBgn0002926 FBtr0076984 ndl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6530 chr2RHet 1895683 1895805 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9588 chr3R 5152605 5152860 + 13 NA exon (FBgn0037676, exon 2 of 4) protein_coding-exon (FBgn0037676, exon 2 of 4) 1495 FBgn0037676 FBgn0037676 FBtr0301210 CG8861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5489 chr2R 14275361 14275514 + 13 NA promoter-TSS (FBgn0040736) protein_coding-promoter-TSS (FBgn0040736) -188 FBgn0040736 FBgn0040736 FBtr0086665 IM3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7839 chr3L 12878600 12878701 + 13 NA exon (FBgn0036321, exon 1 of 1) protein_coding-exon (FBgn0036321, exon 1 of 1) 498 FBgn0036321 FBgn0036321 FBtr0075868 CG14120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12558 chr3R 26677912 26677966 + 13 NA promoter-TSS (FBgn0003720) protein_coding-promoter-TSS (FBgn0003720) -98 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_126 chr2L 951978 952041 + 13 NA exon (FBgn0028481, exon 4 of 11) protein_coding-exon (FBgn0028481, exon 4 of 11) 29216 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2416 chr2L 16092402 16092558 + 13 NA Intergenic Intergenic -2529 FBgn0028520 FBgn0028520 FBtr0080815 CG4891 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5571 chr2R 14978306 14978553 + 13 NA exon (FBgn0004168, exon 3 of 11) protein_coding-exon (FBgn0004168, exon 3 of 11) 5250 FBgn0050125 FBgn0050125 FBtr0086595 Ir56a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10821 chr3R 14471417 14471541 + 13 NA exon (FBgn0263974, exon 7 of 10) protein_coding-exon (FBgn0263974, exon 7 of 10) -4300 FBgn0038632 FBgn0038632 FBtr0290199 CG14301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11663 chr3R 22433113 22433237 + 13 NA Intergenic Intergenic -11670 FBgn0039434 FBgn0039434 FBtr0085029 TwdlM protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12798 chr3R 27750813 27750919 + 13 NA intron (FBgn0011224, intron 3 of 13) protein_coding-intron (FBgn0011224, intron 4 of 13) 56025 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6228 chr2R 20511560 20511738 + 13 NA exon (FBgn0035041, exon 5 of 8) protein_coding-exon (FBgn0035041, exon 5 of 8) 4618 FBgn0086030 FBgn0086030 FBtr0114306 snoRNA:Me18S-G393 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_12451 chr3R 25643174 25643239 + 13 NA exon (FBgn0039703, exon 1 of 2) protein_coding-exon (FBgn0039703, exon 1 of 2) 280 FBgn0039703 FBgn0039703 FBtr0085532 CG7829 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10212 chr3R 10435615 10435754 + 13 NA exon (FBgn0038246, exon 1 of 7) protein_coding-exon (FBgn0038246, exon 1 of 7) 320 FBgn0038246 FBgn0038246 FBtr0082961 CG14853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11952 chr3R 23668297 23668565 + 13 NA intron (FBgn0085382, intron 2 of 11) protein_coding-intron (FBgn0085382, intron 2 of 11) -2380 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11982 chr3R 23838833 23838901 + 13 NA Intergenic Intergenic -13467 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2116 chr2L 14911521 14911622 + 13 NA intron (FBgn0259213, intron 19 of 19) protein_coding-intron (FBgn0259213, intron 19 of 19) -13164 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12545 chr3R 26541212 26541317 + 13 NA Intergenic Intergenic -9449 FBgn0051010 FBgn0051010 FBtr0085725 CG31010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5374 chr2R 13227487 13227628 + 13 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -32750 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11587 chr3R 22123051 22123128 + 13 NA Intergenic Intergenic 27908 FBgn0261833 FBgn0261833 FBtr0303394 CG42765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9843 chr3R 7539262 7539391 + 13 NA Intergenic Intergenic 1825 FBgn0037940 FBgn0037940 FBtr0082428 CG14720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9866 chr3R 7720887 7721064 + 13 NA exon (FBgn0037963, exon 13 of 16) protein_coding-exon (FBgn0037963, exon 13 of 16) -1956 FBgn0037962 FBgn0037962 FBtr0082514 CG6971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5146 chr2R 11043455 11043682 + 13 NA exon (FBgn0013467, exon 1 of 3) protein_coding-exon (FBgn0013467, exon 1 of 3) 626 FBgn0013467 FBgn0013467 FBtr0087362 igl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13622 chrX 8942051 8942204 + 13 NA intron (FBgn0259734, intron 1 of 6) protein_coding-intron (FBgn0259734, intron 1 of 6) 897 FBgn0264384 FBgn0264384 FBtr0332281 CR43836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4430 chr2R 5398371 5398445 + 13 NA exon (FBgn0259246, exon 7 of 22) protein_coding-exon (FBgn0259246, exon 7 of 22) 7115 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_461 chr2L 3072598 3072914 + 13 NA promoter-TSS (FBgn0015600) protein_coding-promoter-TSS (FBgn0015600) 14294 FBgn0027571 FBgn0027571 FBtr0290093 CG3523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3228 chr2L 20512123 20512230 + 13 NA Intergenic Intergenic 17070 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3455 chr2L 21770519 21770628 + 13 NA intron (FBgn0051612, intron 2 of 3) protein_coding-intron (FBgn0051612, intron 2 of 3) 12563 FBgn0032961 FBgn0032961 FBtr0085905 CG1416 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10813 chr3R 14444906 14445030 + 13 NA intron (FBgn0038629, intron 2 of 7) protein_coding-intron (FBgn0038629, intron 2 of 8) -1735 FBgn0038631 FBgn0038631 FBtr0083694 CG7695 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1323 chr2L 9203451 9203577 + 13 NA intron (FBgn0041092, intron 2 of 12) protein_coding-intron (FBgn0041092, intron 3 of 14) 33080 FBgn0051885 FBgn0051885 FBtr0079820 tRNA:CR31885 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4616 chr2R 6878209 6878336 + 13 NA exon (FBgn0040765, exon 3 of 5) protein_coding-exon (FBgn0040765, exon 3 of 5) -49066 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8813 chr3L 24057536 24057705 + 13 NA Intergenic Intergenic -9709 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2746 chr2L 17786611 17786677 + 13 NA TTS (FBgn0262018) protein_coding-TTS (FBgn0262018) -5768 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4886 chr2R 8916077 8916334 + 13 NA Intergenic Intergenic 18588 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9465 chr3R 4289467 4289558 + 13 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 13803 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_412 chr2L 2610884 2610981 + 13 NA exon (FBgn0031440, exon 2 of 2) protein_coding-exon (FBgn0031440, exon 2 of 2) 786 FBgn0031440 FBgn0031440 FBtr0114513 CG15395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5211 chr2R 11667034 11667088 + 13 NA exon (FBgn0083919, exon 7 of 15) protein_coding-exon (FBgn0083919, exon 7 of 15) 35389 FBgn0083919 FBgn0083919 FBtr0329910 Zasp52 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7978 chr3L 13877880 13878028 + 13 NA TTS (FBgn0264006) protein_coding-TTS (FBgn0264006) 3083 FBgn0036382 FBgn0036382 FBtr0075755 CG13737 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12156 chr3R 24479388 24479493 + 13 NA Intergenic Intergenic -3238 FBgn0051050 FBgn0051050 FBtr0085317 CG31050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_122 chr2L 939382 939563 + 13 NA intron (FBgn0028481, intron 2 of 10) protein_coding-intron (FBgn0028481, intron 2 of 10) 16679 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4931 chr2R 9274461 9274661 + 13 NA Intergenic Intergenic 6162 FBgn0263774 FBgn0263774 FBtr0310562 CG43691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1387 chr2L 9845562 9845681 + 13 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) -2668 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8604 chr3L 20457515 20457613 + 13 NA promoter-TSS (FBgn0036995) protein_coding-promoter-TSS (FBgn0036995) 398 FBgn0036995 FBgn0036995 FBtr0331569 CG5195 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7672 chr3L 11657422 11657553 + 13 NA intron (FBgn0052085, intron 4 of 5) protein_coding-intron (FBgn0052085, intron 4 of 5) 7451 FBgn0262437 FBgn0262437 FBtr0304421 mir-274 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6990 chr3L 3295773 3295839 + 13 NA intron (FBgn0035430, intron 1 of 2) protein_coding-intron (FBgn0035430, intron 1 of 2) -3266 FBgn0262269 FBgn0262269 FBtr0304379 mir-955 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4340 chr2R 4760379 4760477 + 13 NA exon (FBgn0011286, exon 12 of 27) protein_coding-exon (FBgn0011286, exon 12 of 27) 12559 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3081 chr2L 19715816 19715938 + 13 NA exon (FBgn0000464, exon 9 of 17) protein_coding-exon (FBgn0000464, exon 9 of 17) -14909 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8570 chr3L 19653283 19653454 + 13 NA intron (FBgn0036899, intron 1 of 8) protein_coding-intron (FBgn0036899, intron 1 of 8) 3836 FBgn0036899 FBgn0036899 FBtr0331860 tey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2106 chr2L 14880671 14880857 + 13 NA intron (FBgn0013300, intron 1 of 2) protein_coding-intron (FBgn0013300, intron 1 of 2) 888 FBgn0013300 FBgn0013300 FBtr0080682 Mst35Ba protein_coding Nup98-S2-pascual-garcia2017_R1_peak_396 chr2L 2480468 2480632 + 13 NA Intergenic Intergenic 9569 FBgn0031429 FBgn0031429 FBtr0077784 CG15393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7752 chr3L 12287437 12287491 + 13 NA intron (FBgn0036274, intron 1 of 5) protein_coding-intron (FBgn0036274, intron 1 of 5) 1759 FBgn0036274 FBgn0036274 FBtr0301071 CG4328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3412 chr2L 21586561 21586639 + 13 NA exon (FBgn0016919, exon 4 of 8) protein_coding-exon (FBgn0016919, exon 4 of 8) 2755 FBgn0016919 FBgn0016919 FBtr0301173 nompB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2266 chr2L 15485729 15485858 + 13 NA TTS (FBgn0020371) protein_coding-TTS (FBgn0020371) 1025 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7073 chr3L 4993339 4993460 + 13 NA TTS (FBgn0052232) protein_coding-TTS (FBgn0052232) 3478 FBgn0052232 FBgn0052232 FBtr0073373 CG32232 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9339 chr3R 3208950 3209022 + 13 NA Intergenic Intergenic -8218 FBgn0261502 FBgn0261502 FBtr0302394 CG42650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10759 chr3R 14143280 14143391 + 13 NA intron (FBgn0051235, intron 4 of 4) protein_coding-intron (FBgn0051235, intron 4 of 4) -6707 FBgn0038603 FBgn0038603 FBtr0083592 PKD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5231 chr2R 11831720 11831868 + 13 NA exon (FBgn0050093, exon 1 of 1) protein_coding-exon (FBgn0050093, exon 1 of 1) 246 FBgn0050093 FBgn0050093 FBtr0087199 CG30093 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10592 chr3R 13052047 13052289 + 13 NA Intergenic Intergenic -6562 FBgn0051262 FBgn0051262 FBtr0302853 CG31262 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7615 chr3L 10818500 10818592 + 13 NA Intergenic Intergenic 10627 FBgn0262020 FBgn0262020 FBtr0303850 CG42831 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7632 chr3L 11000036 11000090 + 13 NA intron (FBgn0013469, intron 1 of 2) protein_coding-intron (FBgn0013469, intron 1 of 2) 1870 FBgn0013469 FBgn0013469 FBtr0330080 klu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2510 chr2L 16708340 16708503 + 13 NA intron (FBgn0062978, intron 1 of 1) protein_coding-intron (FBgn0062978, intron 1 of 1) -5224 FBgn0263745 FBgn0263745 FBtr0310392 CR43670 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6944 chr3L 2716646 2716734 + 13 NA TTS (FBgn0052296) protein_coding-TTS (FBgn0052296) -5000 FBgn0264606 FBgn0264606 FBtr0333631 CG43955 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_484 chr2L 3280747 3280944 + 13 NA promoter-TSS (FBgn0031514) protein_coding-promoter-TSS (FBgn0031514) -1388 FBgn0031514 FBgn0031514 FBtr0077609 CG3332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_263 chr2L 1456638 1456887 + 13 NA Intergenic Intergenic 14036 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12474 chr3R 25744482 25744536 + 13 NA intron (FBgn0003861, intron 4 of 13) protein_coding-intron (FBgn0003861, intron 4 of 13) 1502 FBgn0003861 FBgn0003861 FBtr0331356 trp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6874 chr3L 1889893 1890033 + 13 NA intron (FBgn0262624, intron 2 of 5) protein_coding-intron (FBgn0262624, intron 2 of 5) 473 FBgn0262624 FBgn0262624 FBtr0072837 Tmhs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8313 chr3L 16907511 16907671 + 13 NA intron (FBgn0261565, intron 5 of 7) protein_coding-intron (FBgn0261565, intron 3 of 5) -8761 FBgn0036676 FBgn0036676 FBtr0075261 CG13028 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11537 chr3R 21890840 21890894 + 13 NA Intergenic Intergenic -2134 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1677 chr2L 12653995 12654055 + 13 NA Intergenic Intergenic -7669 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12725 chr3R 27337295 27337614 + 13 NA Intergenic Intergenic 12493 FBgn0039851 FBgn0039851 FBtr0085790 mey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3891 chr2LHet 296156 296328 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4110 chr2R 3075556 3075723 + 13 NA intron (FBgn0003090, intron 1 of 6) protein_coding-intron (FBgn0003090, intron 1 of 5) 872 FBgn0003090 FBgn0003090 FBtr0089044 pk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11981 chr3R 23833424 23833567 + 13 NA Intergenic Intergenic -17022 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11577 chr3R 22094479 22094575 + 13 NA exon (FBgn0039420, exon 2 of 8) protein_coding-exon (FBgn0039420, exon 2 of 8) 6143 FBgn0039420 FBgn0039420 FBtr0300398 CG6154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8485 chr3L 18160023 18160165 + 13 NA TTS (FBgn0003997) protein_coding-TTS (FBgn0003997) -4472 FBgn0036781 FBgn0036781 FBtr0075134 CG13699 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3640 chr2L 22190894 22191089 + 13 NA intron (FBgn0259683, intron 5 of 6) protein_coding-intron (FBgn0259683, intron 5 of 6) 15576 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_595 chr2L 4160735 4160820 + 13 NA Intergenic Intergenic 5357 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11513 chr3R 21784340 21784423 + 13 NA promoter-TSS (FBgn0039398) protein_coding-promoter-TSS (FBgn0039398) -817 FBgn0039398 FBgn0039398 FBtr0084948 CG14540 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2839 chr2L 18090085 18090139 + 13 NA TTS (FBgn0032663) protein_coding-TTS (FBgn0032663) 2126 FBgn0032663 FBgn0032663 FBtr0081045 CG15153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6939 chr3L 2679338 2679392 + 13 NA exon (FBgn0264606, exon 7 of 18) protein_coding-exon (FBgn0264606, exon 7 of 18) 17743 FBgn0053234 FBgn0053234 FBtr0290142 CG33234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13792 chrX 17816469 17816638 + 13 NA exon (FBgn0030884, exon 7 of 7) protein_coding-exon (FBgn0030884, exon 7 of 7) 11057 FBgn0030884 FBgn0030884 FBtr0074505 CG6847 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10083 chr3R 9392775 9392857 + 13 NA Intergenic Intergenic -7731 FBgn0264430 FBgn0264430 FBtr0332550 CR43848 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2720 chr2L 17657703 17657891 + 13 NA exon (FBgn0015609, exon 17 of 22) protein_coding-exon (FBgn0015609, exon 17 of 22) 29938 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12908 chr4 72691 72767 + 13 NA exon (FBgn0004859, exon 2 of 6) protein_coding-exon (FBgn0004859, exon 2 of 6) 4228 FBgn0004859 FBgn0004859 FBtr0308074 ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7188 chr3L 6382295 6382495 + 13 NA Intergenic Intergenic -11297 FBgn0261801 FBgn0261801 FBtr0303270 CG42747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_104 chr2L 900759 900919 + 13 NA TTS (FBgn0003916) snRNA-TTS (FBgn0003916) 815 FBgn0003916 FBgn0003916 FBtr0078028 snRNA:U1:21D snRNA Nup98-S2-pascual-garcia2017_R1_peak_775 chr2L 5553114 5553185 + 13 NA promoter-TSS (FBgn0031721) protein_coding-promoter-TSS (FBgn0031721) 701 FBgn0031720 FBgn0031720 FBtr0079121 CG14013 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8512 chr3L 18479833 18480179 + 13 NA exon (FBgn0036789, exon 4 of 4) protein_coding-exon (FBgn0036789, exon 4 of 4) -14522 FBgn0028416 FBgn0028416 FBtr0075115 Met75Ca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7096 chr3L 5554668 5554722 + 13 NA promoter-TSS (FBgn0010894) protein_coding-promoter-TSS (FBgn0010894) 3 FBgn0010894 FBgn0010894 FBtr0300070 sinu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10784 chr3R 14321371 14321575 + 13 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 49835 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12240 chr3R 24788800 24788902 + 13 NA intron (FBgn0039617, intron 1 of 10) protein_coding-intron (FBgn0039617, intron 1 of 10) 7225 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12729 chr3R 27362083 27362260 + 13 NA Intergenic Intergenic -6714 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7952 chr3L 13719738 13719821 + 13 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 76721 FBgn0264001 FBgn0264001 FBtr0330354 bru-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4394 chr2R 5086954 5087235 + 13 NA exon (FBgn0015561, exon 3 of 3) protein_coding-exon (FBgn0015561, exon 3 of 3) 4375 FBgn0015561 FBgn0015561 FBtr0088586 unpg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8353 chr3L 17201838 17201892 + 13 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 29447 FBgn0260943 FBgn0260943 FBtr0113427 Rbp6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4646 chr2R 7203275 7203377 + 13 NA exon (FBgn0016047, exon 6 of 19) protein_coding-exon (FBgn0016047, exon 6 of 19) 1755 FBgn0016047 FBgn0016047 FBtr0301453 nompA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_413 chr2L 2612833 2612906 + 13 NA Intergenic Intergenic 2723 FBgn0031440 FBgn0031440 FBtr0114513 CG15395 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8860 chr3LHet 806996 807116 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2468 chr2L 16429047 16429163 + 13 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -11221 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_4152 chr2R 3310204 3310327 + 13 NA intron (FBgn0003460, intron 1 of 6) protein_coding-intron (FBgn0003460, intron 1 of 6) 3728 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7227 chr3L 6784558 6784695 + 13 NA exon (FBgn0086680, exon 1 of 1) protein_coding-exon (FBgn0086680, exon 1 of 1) 1368 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_302 chr2L 1573751 1573953 + 13 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 13303 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_84 chr2L 778243 778433 + 13 NA promoter-TSS (FBgn0031277) protein_coding-promoter-TSS (FBgn0031277) -835 FBgn0031277 FBgn0031277 FBtr0078005 CG13947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5353 chr2R 13072284 13072338 + 13 NA Intergenic Intergenic -10397 FBgn0034205 FBgn0034205 FBtr0086990 CG10950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8826 chr3L 24147264 24147443 + 13 NA intron (FBgn0011288, intron 3 of 7) protein_coding-intron (FBgn0011288, intron 3 of 7) 80024 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11632 chr3R 22259147 22259285 + 13 NA Intergenic Intergenic 4904 FBgn0263382 FBgn0263382 FBtr0309068 CR43434 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12018 chr3R 23961748 23961842 + 13 NA Intergenic Intergenic -10807 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_434 chr2L 2783098 2783200 + 13 NA exon (FBgn0004242, exon 10 of 11) protein_coding-exon (FBgn0004242, exon 10 of 11) -11373 FBgn0031460 FBgn0031460 FBtr0077730 CG15399 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2756 chr2L 17798521 17798622 + 13 NA exon (FBgn0262018, exon 9 of 14) protein_coding-exon (FBgn0262018, exon 9 of 14) 6159 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8054 chr3L 14473474 14473617 + 13 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) -37380 FBgn0036426 FBgn0036426 FBtr0290282 CG9592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7603 chr3L 10720186 10720246 + 13 NA Intergenic Intergenic -30239 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9778 chr3R 6918890 6919044 + 13 NA Intergenic Intergenic 4825 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5601 chr2R 15428376 15428524 + 13 NA intron (FBgn0003435, intron 5 of 9) protein_coding-intron (FBgn0003435, intron 5 of 9) -11126 FBgn0262571 FBgn0262571 FBtr0304898 CG43111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6379 chr2RHet 586831 587099 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13087 chrU 175114 175287 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12588 chr3R 26754393 26754447 + 13 NA intron (FBgn0020912, intron 4 of 4) protein_coding-intron (FBgn0020912, intron 4 of 4) 7809 FBgn0039810 FBgn0039810 FBtr0085752 CG15549 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8334 chr3L 17116332 17116517 + 13 NA intron (FBgn0260943, intron 7 of 14) protein_coding-intron (FBgn0260943, intron 7 of 14) -43539 FBgn0263381 FBgn0263381 FBtr0309067 CR43433 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6332 chr2RHet 373161 373252 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3161 chr2L 20143134 20143260 + 13 NA Intergenic Intergenic -8274 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10857 chr3R 14786081 14786256 + 13 NA intron (FBgn0263983, intron 2 of 14) protein_coding-intron (FBgn0261262, intron 5 of 18) 10250 FBgn0263983 FBgn0263983 FBtr0330024 CG43732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1190 chr2L 8783957 8784211 + 13 NA Intergenic Intergenic -1590 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4947 chr2R 9403216 9403270 + 13 NA exon (FBgn0033848, exon 2 of 2) protein_coding-exon (FBgn0033848, exon 2 of 2) 479 FBgn0033848 FBgn0033848 FBtr0087671 CG13330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1278 chr2L 8922277 8922512 + 13 NA intron (FBgn0085427, intron 2 of 10) protein_coding-intron (FBgn0085427, intron 2 of 10) -11669 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13442 chrX 1391317 1391371 + 13 NA promoter-TSS (FBgn0053513) protein_coding-promoter-TSS (FBgn0053513) 10498 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9456 chr3R 4197552 4197758 + 13 NA intron (FBgn0263416, intron 15 of 15) protein_coding-intron (FBgn0263416, intron 15 of 15) 9107 FBgn0037584 FBgn0037584 FBtr0301759 CG7963 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4860 chr2R 8723104 8723158 + 13 NA Intergenic Intergenic 6932 FBgn0033775 FBgn0033775 FBtr0087820 Cyp9h1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_301 chr2L 1566641 1566727 + 13 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 11554 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4496 chr2R 5873662 5873964 + 13 NA Intergenic Intergenic -3008 FBgn0261014 FBgn0261014 FBtr0112905 TER94 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6642 chr2RHet 2301594 2301773 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7811 chr3L 12627743 12627871 + 13 NA intron (FBgn0052111, intron 2 of 6) protein_coding-intron (FBgn0052111, intron 2 of 6) 6771 FBgn0052111 FBgn0052111 FBtr0309060 CG32111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7717 chr3L 11948727 11948813 + 13 NA exon (FBgn0036229, exon 2 of 2) protein_coding-exon (FBgn0036229, exon 2 of 2) 1587 FBgn0036229 FBgn0036229 FBtr0076043 CG7248 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4915 chr2R 9179595 9179708 + 13 NA intron (FBgn0052843, intron 1 of 10) protein_coding-intron (FBgn0052843, intron 1 of 10) 3778 FBgn0052843 FBgn0052843 FBtr0330736 Dh31-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7986 chr3L 13934355 13934451 + 13 NA exon (FBgn0052137, exon 2 of 7) protein_coding-exon (FBgn0052137, exon 2 of 7) 2053 FBgn0052137 FBgn0052137 FBtr0075758 CG32137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13665 chrX 12413719 12413839 + 13 NA exon (FBgn0264542, exon 8 of 11) protein_coding-exon (FBgn0264542, exon 8 of 11) 22045 FBgn0086047 FBgn0086047 FBtr0114323 snoRNA:Me18S-G894 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5546 chr2R 14806566 14806620 + 13 NA intron (FBgn0034408, intron 4 of 7) protein_coding-intron (FBgn0034408, intron 4 of 7) -7374 FBgn0028669 FBgn0028669 FBtr0086602 Vha100-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10714 chr3R 13851338 13851416 + 13 NA TTS (FBgn0038565) protein_coding-TTS (FBgn0038565) 1948 FBgn0038565 FBgn0038565 FBtr0083540 CG7794 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4211 chr2R 3895742 3895883 + 13 NA TTS (FBgn0033250) protein_coding-TTS (FBgn0033250) 1043 FBgn0013308 FBgn0013308 FBtr0088864 Odc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1820 chr2L 13613505 13613660 + 13 NA intron (FBgn0259984, intron 5 of 11) protein_coding-intron (FBgn0259984, intron 5 of 12) 3547 FBgn0262194 FBgn0262194 FBtr0304220 mir-2489 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5941 chr2R 18113602 18113708 + 13 NA exon (FBgn0034716, exon 4 of 7) protein_coding-exon (FBgn0034716, exon 4 of 7) 2069 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1648 chr2L 12397713 12397936 + 13 NA promoter-TSS (FBgn0041195) protein_coding-promoter-TSS (FBgn0041195) -450 FBgn0041195 FBgn0041195 FBtr0080365 Pkd2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4453 chr2R 5607108 5607180 + 13 NA exon (FBgn0259678, exon 7 of 8) protein_coding-exon (FBgn0259678, exon 7 of 8) 7315 FBgn0010316 FBgn0010316 FBtr0088469 dap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3517 chr2L 21890049 21890241 + 13 NA Intergenic Intergenic -4082 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10953 chr3R 15474098 15474165 + 13 NA promoter-TSS (FBgn0038723) protein_coding-promoter-TSS (FBgn0038723) -78 FBgn0051220 FBgn0051220 FBtr0302358 CG31220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10791 chr3R 14338968 14339068 + 13 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 32290 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9522 chr3R 4740409 4740563 + 13 NA intron (FBgn0262614, intron 1 of 13) protein_coding-intron (FBgn0262614, intron 1 of 13) -20367 FBgn0003015 FBgn0003015 FBtr0081956 osk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3637 chr2L 22188536 22189285 + 13 NA TTS (FBgn0259683) protein_coding-TTS (FBgn0259683) 13495 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1566 chr2L 11728027 11728084 + 13 NA Intergenic Intergenic -10897 FBgn0032373 FBgn0032373 FBtr0080255 Vha100-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1252 chr2L 8875207 8875398 + 13 NA Intergenic Intergenic 8535 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7629 chr3L 10967516 10967688 + 13 NA Intergenic Intergenic 1854 FBgn0036112 FBgn0036112 FBtr0076194 CG14147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1765 chr2L 13088741 13088795 + 13 NA Intergenic Intergenic -18103 FBgn0032470 FBgn0032470 FBtr0301366 CG5142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2432 chr2L 16185210 16185357 + 13 NA exon (FBgn0001991, exon 30 of 32) protein_coding-exon (FBgn0001991, exon 30 of 32) -6095 FBgn0264350 FBgn0264350 FBtr0332026 CR43806 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12907 chr4 72162 72268 + 13 NA exon (FBgn0004859, exon 3 of 6) protein_coding-exon (FBgn0004859, exon 3 of 6) 4742 FBgn0004859 FBgn0004859 FBtr0308074 ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11946 chr3R 23655259 23655456 + 13 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -15454 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10396 chr3R 11893151 11893406 + 13 NA promoter-TSS (FBgn0038397) protein_coding-promoter-TSS (FBgn0038397) -44 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4282 chr2R 4410030 4410222 + 13 NA exon (FBgn0050361, exon 2 of 19) protein_coding-exon (FBgn0050361, exon 2 of 19) 9673 FBgn0050361 FBgn0050361 FBtr0088756 mtt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10195 chr3R 10269900 10270103 + 13 NA intron (FBgn0086901, intron 3 of 15) protein_coding-intron (FBgn0086901, intron 2 of 14) 25686 FBgn0085417 FBgn0085417 FBtr0301081 CG34388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4814 chr2R 8291881 8291935 + 13 NA exon (FBgn0033728, exon 3 of 3) protein_coding-exon (FBgn0033728, exon 3 of 3) -1602 FBgn0033729 FBgn0033729 FBtr0087921 Cpr49Af protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3705 chr2L 22358191 22358384 + 13 NA intron (FBgn0039972, intron 3 of 8) protein_coding-intron (FBgn0039972, intron 1 of 6) 3932 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2159 chr2L 15084093 15084271 + 13 NA intron (FBgn0028879, intron 2 of 16) protein_coding-intron (FBgn0028879, intron 1 of 16) 9406 FBgn0028879 FBgn0028879 FBtr0332180 CG15270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_788 chr2L 5605333 5605490 + 13 NA intron (FBgn0031725, intron 6 of 9) protein_coding-intron (FBgn0031725, intron 8 of 11) 8578 FBgn0031724 FBgn0031724 FBtr0079109 CG18266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5058 chr2R 10339582 10339723 + 13 NA intron (FBgn0261613, intron 3 of 5) protein_coding-intron (FBgn0261613, intron 3 of 5) 16248 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_74 chr2L 756836 756936 + 13 NA exon (FBgn0031275, exon 5 of 10) protein_coding-exon (FBgn0031275, exon 5 of 10) 6277 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4463 chr2R 5656542 5656750 + 13 NA exon (FBgn0027589, exon 8 of 9) protein_coding-exon (FBgn0027589, exon 8 of 9) -11073 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7331 chr3L 7613256 7613448 + 13 NA intron (FBgn0035802, intron 6 of 16) protein_coding-intron (FBgn0035802, intron 4 of 14) -19465 FBgn0086074 FBgn0086074 FBtr0114350 snoRNA:Me18S-A1806 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_439 chr2L 2818267 2818423 + 13 NA exon (FBgn0031464, exon 8 of 10) protein_coding-exon (FBgn0031464, exon 8 of 10) -2585 FBgn0031463 FBgn0031463 FBtr0113017 CG15400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_446 chr2L 2849932 2850161 + 13 NA exon (FBgn0031473, exon 5 of 5) protein_coding-exon (FBgn0031473, exon 5 of 5) 2414 FBgn0031472 FBgn0031472 FBtr0077620 CG2983 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7326 chr3L 7594220 7594274 + 13 NA intron (FBgn0035802, intron 1 of 16) protein_coding-intron (FBgn0035802, intron 1 of 16) 3917 FBgn0035802 FBgn0035802 FBtr0089851 CG33275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3527 chr2L 21950927 21951131 + 13 NA Intergenic Intergenic 34668 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2569 chr2L 16991762 16992159 + 13 NA intron (FBgn0053179, intron 5 of 6) protein_coding-intron (FBgn0053179, intron 5 of 6) 6982 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2053 chr2L 14660142 14660237 + 13 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 29136 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3508 chr2L 21877196 21877323 + 13 NA Intergenic Intergenic -16968 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3830 chr2L 22859597 22859713 + 13 NA Intergenic Intergenic -14879 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6817 chr3L 1282945 1283079 + 13 NA intron (FBgn0052333, intron 1 of 9) protein_coding-intron (FBgn0052333, intron 1 of 8) 7056 FBgn0052333 FBgn0052333 FBtr0100256 CG32333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_143 chr2L 1007345 1007763 + 13 NA TTS (FBgn0031294) protein_coding-TTS (FBgn0031294) 19336 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3971 chr2R 859129 859340 + 13 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 22062 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4720 chr2R 7674471 7674567 + 13 NA TTS (FBgn0033651) protein_coding-TTS (FBgn0033651) 2479 FBgn0033651 FBgn0033651 FBtr0088065 Tango3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12560 chr3R 26683384 26683722 + 13 NA Intergenic Intergenic 5516 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11555 chr3R 21961167 21961411 + 13 NA exon (FBgn0039415, exon 2 of 4) protein_coding-exon (FBgn0039415, exon 2 of 4) 2413 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8609 chr3L 20614881 20614979 + 13 NA Intergenic Intergenic -1171 FBgn0001323 FBgn0001323 FBtr0078212 knrl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10331 chr3R 11422627 11422787 + 13 NA Intergenic Intergenic -38483 FBgn0263040 FBgn0263040 FBtr0306929 CG43335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7329 chr3L 7609221 7609342 + 13 NA exon (FBgn0035802, exon 2 of 15) protein_coding-exon (FBgn0035802, exon 2 of 15) 18951 FBgn0035802 FBgn0035802 FBtr0089851 CG33275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4418 chr2R 5291191 5291317 + 13 NA exon (FBgn0016078, exon 4 of 7) protein_coding-exon (FBgn0016078, exon 4 of 7) -3445 FBgn0053774 FBgn0053774 FBtr0091775 CG33774 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9901 chr3R 8019217 8019354 + 13 NA exon (FBgn0037994, exon 2 of 2) protein_coding-exon (FBgn0037994, exon 2 of 2) 1448 FBgn0037994 FBgn0037994 FBtr0082546 CG4810 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4863 chr2R 8778106 8778207 + 13 NA intron (FBgn0003975, intron 2 of 7) protein_coding-intron (FBgn0003975, intron 2 of 7) 6450 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3689 chr2L 22325488 22325552 + 13 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -15102 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10738 chr3R 13962711 13962901 + 13 NA Intergenic Intergenic -15036 FBgn0038567 FBgn0038567 FBtr0083546 CG14316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6452 chr2RHet 1298224 1298462 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9293 chr3R 2987364 2987496 + 13 NA Intergenic Intergenic -1121 FBgn0002306 FBgn0002306 FBtr0081571 sas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9129 chr3R 1960608 1960832 + 13 NA Intergenic Intergenic -7043 FBgn0263498 FBgn0263498 FBtr0309514 CR43487 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4250 chr2R 4198156 4198307 + 13 NA Intergenic Intergenic 12611 FBgn0262440 FBgn0262440 FBtr0304435 mir-280 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1655 chr2L 12553672 12553847 + 13 NA Intergenic Intergenic 10583 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9686 chr3R 6291646 6291738 + 13 NA Intergenic Intergenic 31181 FBgn0037817 FBgn0037817 FBtr0301283 Cyp12e1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_229 chr2L 1382896 1383098 + 13 NA intron (FBgn0002543, intron 13 of 13) protein_coding-intron (FBgn0002543, intron 13 of 13) 14908 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2930 chr2L 18747113 18747297 + 13 NA Intergenic Intergenic 6847 FBgn0032709 FBgn0032709 FBtr0081101 CG15167 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_668 chr2L 4578927 4579044 + 13 NA promoter-TSS (FBgn0031613) protein_coding-promoter-TSS (FBgn0031613) -784 FBgn0031613 FBgn0031613 FBtr0077444 HP6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12088 chr3R 24216019 24216130 + 13 NA Intergenic Intergenic -27856 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8185 chr3L 15911535 15911715 + 13 NA intron (FBgn0036544, intron 1 of 15) protein_coding-intron (FBgn0036544, intron 1 of 15) 6336 FBgn0036544 FBgn0036544 FBtr0334071 sff protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8880 chr3LHet 1072808 1072911 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4735 chr2R 7716342 7716409 + 13 NA exon (FBgn0033654, exon 4 of 4) protein_coding-exon (FBgn0033654, exon 4 of 4) 3505 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1998 chr2L 14471581 14471674 + 13 NA Intergenic Intergenic -19235 FBgn0005771 FBgn0005771 FBtr0080643 noc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12971 chr4 823723 823863 + 13 NA exon (FBgn0039938, exon 2 of 3) protein_coding-exon (FBgn0039938, exon 2 of 3) 3734 FBgn0039939 FBgn0039939 FBtr0089242 CG11231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10441 chr3R 12042360 12042439 + 13 NA Intergenic Intergenic -11426 FBgn0010438 FBgn0010438 FBtr0083277 mtSSB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9134 chr3R 2016068 2016122 + 13 NA intron (FBgn0037408, intron 2 of 5) protein_coding-intron (FBgn0037408, intron 2 of 4) 2973 FBgn0037408 FBgn0037408 FBtr0078590 NPFR1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9729 chr3R 6530662 6530873 + 13 NA promoter-TSS (FBgn0051391) protein_coding-promoter-TSS (FBgn0051391) 30 FBgn0051391 FBgn0051391 FBtr0082321 CG31391 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_249 chr2L 1411963 1412191 + 13 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 8372 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10453 chr3R 12203175 12203319 + 13 NA exon (FBgn0003513, exon 7 of 8) protein_coding-exon (FBgn0003513, exon 7 of 8) -6992 FBgn0038423 FBgn0038423 FBtr0300678 CG10317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2705 chr2L 17606671 17606903 + 13 NA Intergenic Intergenic 12122 FBgn0261089 FBgn0261089 FBtr0303255 Sytalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11799 chr3R 23136995 23137344 + 13 NA exon (FBgn0039510, exon 17 of 32) protein_coding-exon (FBgn0039510, exon 17 of 32) 10878 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5703 chr2R 16097228 16097282 + 13 NA Intergenic Intergenic 2869 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5597 chr2R 15403027 15403187 + 13 NA Intergenic Intergenic -2031 FBgn0034458 FBgn0034458 FBtr0086497 Ir56d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13785 chrX 17401113 17401201 + 13 NA promoter-TSS (FBgn0263706) protein_coding-promoter-TSS (FBgn0263706) -17809 FBgn0263706 FBgn0263706 FBtr0330597 CG43658 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3398 chr2L 21380046 21380178 + 13 NA promoter-TSS (FBgn0032946) protein_coding-promoter-TSS (FBgn0032946) 112 FBgn0032946 FBgn0032946 FBtr0081521 nrv3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12750 chr3R 27486243 27486669 + 13 NA exon (FBgn0039862, exon 4 of 4) protein_coding-exon (FBgn0039862, exon 4 of 4) -8731 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_182 chr2L 1219289 1219567 + 13 NA exon (FBgn0259229, exon 1 of 8) protein_coding-exon (FBgn0259229, exon 1 of 8) 110 FBgn0259229 FBgn0259229 FBtr0299796 CG42329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4465 chr2R 5657972 5658239 + 13 NA intron (FBgn0027589, intron 7 of 8) protein_coding-intron (FBgn0027589, intron 7 of 8) -12532 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11973 chr3R 23820977 23821045 + 13 NA Intergenic Intergenic -4538 FBgn0039568 FBgn0039568 FBtr0085260 CG4815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1791 chr2L 13344965 13345105 + 13 NA Intergenic Intergenic -2756 FBgn0032505 FBgn0032505 FBtr0080464 CG16826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4926 chr2R 9255019 9255244 + 13 NA Intergenic Intergenic 10088 FBgn0033830 FBgn0033830 FBtr0087720 CG10814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11552 chr3R 21915519 21915701 + 13 NA intron (FBgn0039411, intron 2 of 10) protein_coding-intron (FBgn0039411, intron 2 of 10) 8823 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8223 chr3L 16217837 16218036 + 13 NA Intergenic Intergenic 2805 FBgn0052153 FBgn0052153 FBtr0075456 tRNA:CR32153 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1916 chr2L 14296107 14296196 + 13 NA promoter-TSS (FBgn0263649) ncRNA-promoter-TSS (FBgn0263649) -757 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12071 chr3R 24135429 24135595 + 13 NA Intergenic Intergenic -5185 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12320 chr3R 25230866 25230935 + 13 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -74520 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12888 chr3RHet 2037726 2037948 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9385 chr3R 3669484 3669725 + 13 NA exon (FBgn0085413, exon 4 of 12) protein_coding-exon (FBgn0085413, exon 4 of 12) 29521 FBgn0085413 FBgn0085413 FBtr0302036 CG34384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6895 chr3L 2106116 2106289 + 13 NA exon (FBgn0086906, exon 3 of 14) protein_coding-exon (FBgn0086906, exon 3 of 14) 9409 FBgn0086906 FBgn0086906 FBtr0072848 sls protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1848 chr2L 13922035 13922271 + 13 NA exon (FBgn0028938, exon 3 of 3) protein_coding-exon (FBgn0028938, exon 3 of 3) 1396 FBgn0028938 FBgn0028938 FBtr0302990 CG16886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10282 chr3R 11214492 11214669 + 13 NA exon (FBgn0262483, exon 9 of 14) protein_coding-exon (FBgn0262483, exon 9 of 14) -5907 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5281 chr2R 12304938 12305030 + 13 NA promoter-TSS (FBgn0029153) protein_coding-promoter-TSS (FBgn0029153) 1919 FBgn0029153 FBgn0029153 FBtr0100603 Menl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11726 chr3R 22630914 22630968 + 13 NA TTS (FBgn0086060) snoRNA-TTS (FBgn0086060) 707 FBgn0086060 FBgn0086060 FBtr0114336 snoRNA:Me28S-U1554 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_7801 chr3L 12588196 12588297 + 13 NA exon (FBgn0015904, exon 5 of 5) protein_coding-exon (FBgn0015904, exon 5 of 5) 14474 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10628 chr3R 13308671 13308752 + 13 NA exon (FBgn0261046, exon 20 of 35) protein_coding-exon (FBgn0261046, exon 20 of 35) 22678 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4850 chr2R 8687556 8687745 + 13 NA exon (FBgn0003326, exon 4 of 4) protein_coding-exon (FBgn0003326, exon 4 of 4) -6532 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8488 chr3L 18182096 18182150 + 13 NA Intergenic Intergenic -3382 FBgn0003997 FBgn0003997 FBtr0332862 W protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6289 chr2R 21139913 21140204 + 13 NA promoter-TSS (FBgn0050428) protein_coding-promoter-TSS (FBgn0050428) -779 FBgn0050428 FBgn0050428 FBtr0072451 CG30428 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10033 chr3R 9001504 9001595 + 13 NA Intergenic Intergenic -5477 FBgn0038122 FBgn0038122 FBtr0082732 CG8138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12391 chr3R 25491381 25491587 + 13 NA exon (FBgn0039675, exon 3 of 7) protein_coding-exon (FBgn0039675, exon 3 of 7) 983 FBgn0039675 FBgn0039675 FBtr0332440 ppk21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8616 chr3L 20717228 20717291 + 13 NA Intergenic Intergenic -4959 FBgn0037015 FBgn0037015 FBtr0305579 cmpy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7379 chr3L 8221422 8221563 + 13 NA promoter-TSS (FBgn0035860) protein_coding-promoter-TSS (FBgn0035860) -832 FBgn0035860 FBgn0035860 FBtr0076701 eIF4E-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9479 chr3R 4367976 4368080 + 13 NA Intergenic Intergenic -10302 FBgn0037594 FBgn0037594 FBtr0081872 Or85d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7815 chr3L 12661319 12661475 + 13 NA Intergenic Intergenic -15207 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10169 chr3R 10003572 10003787 + 13 NA exon (FBgn0011582, exon 6 of 6) protein_coding-exon (FBgn0011582, exon 6 of 6) 15248 FBgn0038210 FBgn0038210 FBtr0082894 CG3199 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3244 chr2L 20561215 20561304 + 13 NA Intergenic Intergenic -1165 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12932 chr4 545715 545833 + 13 NA exon (FBgn0004607, exon 6 of 14) protein_coding-exon (FBgn0004607, exon 6 of 14) 23338 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11125 chr3R 16507731 16507882 + 13 NA Intergenic Intergenic 3901 FBgn0263406 FBgn0263406 FBtr0309185 CR43452 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1392 chr2L 9865917 9866029 + 13 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) 17684 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12803 chr3R 27761774 27762031 + 13 NA intron (FBgn0011224, intron 1 of 12) protein_coding-intron (FBgn0011224, intron 4 of 13) 44989 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11165 chr3R 16819954 16820035 + 13 NA exon (FBgn0013995, exon 2 of 9) protein_coding-exon (FBgn0013995, exon 2 of 9) -6336 FBgn0263400 FBgn0263400 FBtr0309177 CG43446 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8068 chr3L 14591254 14591392 + 13 NA exon (FBgn0040318, exon 1 of 4) protein_coding-exon (FBgn0040318, exon 1 of 4) 1317 FBgn0040318 FBgn0040318 FBtr0075720 HGTX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12979 chr4 919299 919464 + 13 NA exon (FBgn0025726, exon 3 of 23) protein_coding-exon (FBgn0025726, exon 3 of 23) -5202 FBgn0025726 FBgn0025726 FBtr0089247 unc-13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9830 chr3R 7347314 7347368 + 13 NA Intergenic Intergenic 15276 FBgn0053512 FBgn0053512 FBtr0300492 dpr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12241 chr3R 24796116 24796325 + 13 NA promoter-TSS (FBgn0039617) protein_coding-promoter-TSS (FBgn0039617) -144 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5169 chr2R 11290517 11290711 + 13 NA intron (FBgn0263980, intron 1 of 17) protein_coding-intron (FBgn0263980, intron 1 of 14) -5737 FBgn0014865 FBgn0014865 FBtr0087386 Mtk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7906 chr3L 13395705 13395807 + 13 NA Intergenic Intergenic -1531 FBgn0002573 FBgn0002573 FBtr0075862 sens protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4740 chr2R 7721160 7721466 + 13 NA intron (FBgn0033654, intron 2 of 3) protein_coding-intron (FBgn0033654, intron 2 of 3) 5722 FBgn0033654 FBgn0033654 FBtr0088064 Sobp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3804 chr2L 22684449 22684575 + 13 NA Intergenic Intergenic 6496 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10073 chr3R 9304205 9304259 + 13 NA Intergenic Intergenic -12404 FBgn0040554 FBgn0040554 FBtr0309274 CR17025 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4135 chr2R 3224743 3224797 + 13 NA exon (FBgn0033159, exon 9 of 24) protein_coding-exon (FBgn0033159, exon 9 of 24) 25857 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2021 chr2L 14568810 14568962 + 13 NA Intergenic Intergenic -5160 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6421 chr2RHet 870983 871170 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11238 chr3R 17533889 17534074 + 13 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) 11399 FBgn0051176 FBgn0051176 FBtr0084114 CG31176 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8711 chr3L 22853920 22854067 + 13 NA exon (FBgn0037197, exon 1 of 1) protein_coding-exon (FBgn0037197, exon 1 of 1) 106 FBgn0037197 FBgn0037197 FBtr0078548 CG13239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6041 chr2R 18934135 18934331 + 13 NA exon (FBgn0003900, exon 1 of 2) protein_coding-exon (FBgn0003900, exon 1 of 2) 384 FBgn0003900 FBgn0003900 FBtr0100130 twi protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12800 chr3R 27757590 27757734 + 13 NA exon (FBgn0011224, exon 6 of 17) protein_coding-exon (FBgn0011224, exon 6 of 17) 49229 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9951 chr3R 8429384 8429542 + 13 NA Intergenic Intergenic 23973 FBgn0005671 FBgn0005671 FBtr0301661 Vha55 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7803 chr3L 12589910 12590056 + 13 NA TTS (FBgn0015904) protein_coding-TTS (FBgn0015904) -12748 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11311 chr3R 18217158 18217365 + 13 NA TTS (FBgn0038958) protein_coding-TTS (FBgn0038958) 1559 FBgn0038957 FBgn0038957 FBtr0084220 CG7059 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3289 chr2L 20725163 20725404 + 13 NA exon (FBgn0032878, exon 2 of 4) protein_coding-exon (FBgn0032878, exon 2 of 4) 1268 FBgn0032878 FBgn0032878 FBtr0081396 CG9316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6258 chr2R 20799927 20800141 + 13 NA exon (FBgn0085434, exon 19 of 28) protein_coding-exon (FBgn0085434, exon 19 of 28) -8582 FBgn0066084 FBgn0066084 FBtr0100231 RpL41 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10421 chr3R 11947009 11947188 + 13 NA Intergenic Intergenic -7353 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8924 chr3LHet 2253352 2253441 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9955 chr3R 8466333 8466462 + 13 NA TTS (FBgn0038069) protein_coding-TTS (FBgn0038069) 1898 FBgn0038070 FBgn0038070 FBtr0301150 CG6753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2903 chr2L 18504020 18504125 + 13 NA promoter-TSS (FBgn0032683) protein_coding-promoter-TSS (FBgn0032683) -3215 FBgn0032683 FBgn0032683 FBtr0332323 kon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4130 chr2R 3214361 3214468 + 13 NA intron (FBgn0033159, intron 16 of 23) protein_coding-intron (FBgn0033159, intron 16 of 23) 15501 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11197 chr3R 17215888 17216019 + 13 NA exon (FBgn0004862, exon 2 of 2) protein_coding-exon (FBgn0004862, exon 2 of 2) 1348 FBgn0004862 FBgn0004862 FBtr0084087 bap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_849 chr2L 6107623 6107826 + 13 NA intron (FBgn0051641, intron 2 of 6) protein_coding-intron (FBgn0051641, intron 2 of 6) 7347 FBgn0051641 FBgn0051641 FBtr0304908 stai protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9429 chr3R 3979025 3979079 + 13 NA exon (FBgn0001138, exon 6 of 9) protein_coding-exon (FBgn0001138, exon 6 of 9) -12288 FBgn0011959 FBgn0011959 FBtr0081809 tRNA:R2:84Fa tRNA Nup98-S2-pascual-garcia2017_R1_peak_1875 chr2L 14051207 14051279 + 13 NA intron (FBgn0028875, intron 2 of 13) protein_coding-intron (FBgn0028875, intron 2 of 13) 3661 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12302 chr3R 25169766 25170082 + 13 NA Intergenic Intergenic -24588 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_113 chr2L 919274 919565 + 13 NA Intergenic Intergenic -3374 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3099 chr2L 19809922 19809995 + 13 NA promoter-TSS (FBgn0003931) snRNA-promoter-TSS (FBgn0003931) -776 FBgn0003931 FBgn0003931 FBtr0081292 snRNA:U4:38AB snRNA Nup98-S2-pascual-garcia2017_R1_peak_6742 chr3L 621792 622106 + 13 NA exon (FBgn0263042, exon 1 of 2) protein_coding-exon (FBgn0263042, exon 1 of 2) 367 FBgn0263042 FBgn0263042 FBtr0306919 CG43337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8541 chr3L 19047448 19047558 + 13 NA Intergenic Intergenic -1014 FBgn0263326 FBgn0263326 FBtr0308782 CG43407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9462 chr3R 4283161 4283232 + 13 NA intron (FBgn0263416, intron 1 of 15) protein_coding-intron (FBgn0263416, intron 1 of 15) 20119 FBgn0263416 FBgn0263416 FBtr0309232 CG43462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2376 chr2L 15979607 15979661 + 13 NA promoter-TSS (FBgn0028858) protein_coding-promoter-TSS (FBgn0028858) 99 FBgn0028858 FBgn0028858 FBtr0080800 CG10839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2962 chr2L 19085645 19086008 + 13 NA intron (FBgn0002023, intron 2 of 7) protein_coding-intron (FBgn0002023, intron 2 of 7) -6798 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3935 chr2R 688476 688622 + 13 NA Intergenic Intergenic -12402 FBgn0250830 FBgn0250830 FBtr0111273 CG12547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12478 chr3R 25780834 25780932 + 13 NA exon (FBgn0004622, exon 5 of 10) protein_coding-exon (FBgn0004622, exon 5 of 10) 14286 FBgn0004622 FBgn0004622 FBtr0330298 Takr99D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4904 chr2R 9066146 9066218 + 13 NA TTS (FBgn0028991) protein_coding-TTS (FBgn0028991) 3241 FBgn0053137 FBgn0053137 FBtr0310497 CG33137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3590 chr2L 22054957 22055174 + 13 NA promoter-TSS (FBgn0085202) protein_coding-promoter-TSS (FBgn0085202) -820 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6520 chr2RHet 1880763 1880821 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6463 chr2RHet 1325618 1325794 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13789 chrX 17713368 17713467 + 13 NA exon (FBgn0030868, exon 1 of 1) protein_coding-exon (FBgn0030868, exon 1 of 1) 301 FBgn0030868 FBgn0030868 FBtr0074474 CG12986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1072 chr2L 8474656 8474736 + 13 NA intron (FBgn0262029, intron 1 of 8) protein_coding-intron (FBgn0262029, intron 1 of 8) -2653 FBgn0053194 FBgn0053194 FBtr0079676 CheA29a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5815 chr2R 17124446 17124645 + 13 NA intron (FBgn0034606, intron 2 of 7) protein_coding-intron (FBgn0034606, intron 2 of 7) 14110 FBgn0034606 FBgn0034606 FBtr0071623 ASPP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2151 chr2L 15025658 15025771 + 13 NA exon (FBgn0260446, exon 4 of 16) protein_coding-exon (FBgn0260446, exon 4 of 16) -1195 FBgn0053310 FBgn0053310 FBtr0080698 CG33310 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5962 chr2R 18232364 18232601 + 13 NA exon (FBgn0034720, exon 4 of 14) protein_coding-exon (FBgn0034720, exon 4 of 14) -3330 FBgn0034721 FBgn0034721 FBtr0071819 CG11298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11353 chr3R 19072545 19072756 + 13 NA intron (FBgn0039064, intron 1 of 12) protein_coding-intron (FBgn0039064, intron 1 of 12) 1973 FBgn0039064 FBgn0039064 FBtr0084390 CG4467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10216 chr3R 10461935 10462080 + 13 NA exon (FBgn0038247, exon 2 of 10) protein_coding-exon (FBgn0038247, exon 2 of 10) 1532 FBgn0038247 FBgn0038247 FBtr0082965 Cad88C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3193 chr2L 20377892 20377982 + 13 NA exon (FBgn0032856, exon 5 of 6) protein_coding-exon (FBgn0032856, exon 5 of 6) -3970 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4757 chr2R 7835185 7835273 + 13 NA intron (FBgn0033668, intron 1 of 9) protein_coding-intron (FBgn0033668, intron 1 of 8) 8240 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_213 chr2L 1342589 1342735 + 13 NA promoter-TSS (FBgn0053923) protein_coding-promoter-TSS (FBgn0053923) -567 FBgn0053923 FBgn0053923 FBtr0091927 CG33923 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4265 chr2R 4291460 4291834 + 13 NA exon (FBgn0033289, exon 2 of 6) protein_coding-exon (FBgn0033289, exon 2 of 6) 7581 FBgn0033289 FBgn0033289 FBtr0088764 CG2121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4503 chr2R 5977464 5977638 + 13 NA intron (FBgn0033484, intron 1 of 6) protein_coding-intron (FBgn0033484, intron 1 of 5) -2983 FBgn0028560 FBgn0028560 FBtr0089674 sut4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_137 chr2L 989671 989804 + 13 NA Intergenic Intergenic 37153 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10151 chr3R 9833547 9833601 + 13 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 18107 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7668 chr3L 11582920 11583068 + 13 NA TTS (FBgn0036176) protein_coding-TTS (FBgn0036176) 199 FBgn0036176 FBgn0036176 FBtr0076100 CG7377 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6375 chr2RHet 573455 573654 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7309 chr3L 7407347 7407510 + 13 NA Intergenic Intergenic 8005 FBgn0063083 FBgn0063083 FBtr0091959 pncr015:3L ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7713 chr3L 11927054 11927269 + 13 NA exon (FBgn0011723, exon 5 of 7) protein_coding-exon (FBgn0011723, exon 5 of 7) 4811 FBgn0036223 FBgn0036223 FBtr0332072 CG14126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11004 chr3R 15759531 15759684 + 13 NA exon (FBgn0021776, exon 1 of 1) protein_coding-exon (FBgn0021776, exon 1 of 1) 1235 FBgn0021776 FBgn0021776 FBtr0083848 mira protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10253 chr3R 10850095 10850183 + 13 NA Intergenic Intergenic 9647 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_862 chr2L 6205584 6205638 + 13 NA intron (FBgn0085409, intron 8 of 12) protein_coding-intron (FBgn0085409, intron 8 of 12) -19439 FBgn0026755 FBgn0026755 FBtr0079242 Ugt37b1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4109 chr2R 3071164 3071362 + 13 NA TTS (FBgn0050385) protein_coding-TTS (FBgn0050385) 761 FBgn0050384 FBgn0050384 FBtr0089048 CG30384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_949 chr2L 6982540 6982690 + 13 NA exon (FBgn0031879, exon 7 of 12) protein_coding-exon (FBgn0031879, exon 7 of 12) 10372 FBgn0262616 FBgn0262616 FBtr0305347 CR43142 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5998 chr2R 18631461 18631601 + 13 NA exon (FBgn0259145, exon 12 of 12) protein_coding-exon (FBgn0259145, exon 12 of 12) -3567 FBgn0028371 FBgn0028371 FBtr0302117 jbug protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5540 chr2R 14783937 14784118 + 13 NA intron (FBgn0034408, intron 2 of 7) protein_coding-intron (FBgn0034408, intron 2 of 7) -2907 FBgn0086022 FBgn0086022 FBtr0114298 snoRNA:Me28S-U1130 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_6809 chr3L 1207320 1207439 + 13 NA promoter-TSS (FBgn0004425) protein_coding-promoter-TSS (FBgn0004425) 8 FBgn0004425 FBgn0004425 FBtr0072628 LysB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3815 chr2L 22709312 22709436 + 13 NA Intergenic Intergenic -18366 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1961 chr2L 14389263 14389547 + 13 NA Intergenic Intergenic -8235 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_261 chr2L 1455122 1455184 + 13 NA Intergenic Intergenic 12427 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12069 chr3R 24129996 24130050 + 13 NA exon (FBgn0039577, exon 1 of 1) protein_coding-exon (FBgn0039577, exon 1 of 1) 304 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11869 chr3R 23322533 23322690 + 13 NA Intergenic Intergenic 5136 FBgn0262613 FBgn0262613 FBtr0305290 CG43139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3908 chr2R 187192 187306 + 13 NA Intergenic Intergenic -56805 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12462 chr3R 25674024 25674210 + 13 NA intron (FBgn0039709, intron 4 of 10) protein_coding-intron (FBgn0039709, intron 5 of 11) 6738 FBgn0039709 FBgn0039709 FBtr0085488 Cad99C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_856 chr2L 6163122 6163210 + 13 NA Intergenic Intergenic 2722 FBgn0031786 FBgn0031786 FBtr0079204 CG13989 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12315 chr3R 25211314 25211368 + 13 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -66005 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11131 chr3R 16547183 16547293 + 13 NA Intergenic Intergenic -6975 FBgn0024944 FBgn0024944 FBtr0330712 Oamb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8517 chr3L 18581105 18581246 + 13 NA promoter-TSS (FBgn0036791) protein_coding-promoter-TSS (FBgn0036791) -684 FBgn0036791 FBgn0036791 FBtr0075101 CG7271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1179 chr2L 8767221 8767367 + 13 NA exon (FBgn0032066, exon 4 of 5) protein_coding-exon (FBgn0032066, exon 4 of 5) 1414 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10497 chr3R 12411715 12411817 + 13 NA Intergenic Intergenic -2384 FBgn0020907 FBgn0020907 FBtr0083361 Scp2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8038 chr3L 14333232 14333541 + 13 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) 10940 FBgn0036419 FBgn0036419 FBtr0075744 CG13482 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4042 chr2R 2063813 2063929 + 13 NA TTS (FBgn0033065) protein_coding-TTS (FBgn0033065) 2290 FBgn0011955 FBgn0011955 FBtr0086006 tRNA:R2:42Aa tRNA Nup98-S2-pascual-garcia2017_R1_peak_5660 chr2R 15826848 15827185 + 13 NA TTS (FBgn0263340) ncRNA-TTS (FBgn0263340) 1033 FBgn0263340 FBgn0263340 FBtr0308772 CR43421 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4787 chr2R 8019381 8019548 + 13 NA Intergenic Intergenic -6736 FBgn0033683 FBgn0033683 FBtr0087982 CG18343 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6645 chr2RHet 2314343 2314445 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12001 chr3R 23888184 23888238 + 13 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 35877 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7653 chr3L 11387910 11388122 + 13 NA exon (FBgn0036156, exon 1 of 1) protein_coding-exon (FBgn0036156, exon 1 of 1) 226 FBgn0036156 FBgn0036156 FBtr0076172 CG11726 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_489 chr2L 3328970 3329097 + 13 NA exon (FBgn0053282, exon 5 of 6) protein_coding-exon (FBgn0053282, exon 5 of 6) 1130 FBgn0053282 FBgn0053282 FBtr0113458 CG33282 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3966 chr2R 854752 854843 + 13 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 17625 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4427 chr2R 5387656 5387849 + 13 NA intron (FBgn0004360, intron 1 of 4) protein_coding-intron (FBgn0004360, intron 1 of 4) -3541 FBgn0259246 FBgn0259246 FBtr0305059 brp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10874 chr3R 14945537 14945618 + 13 NA intron (FBgn0038679, intron 2 of 7) protein_coding-intron (FBgn0038679, intron 2 of 7) -4145 FBgn0038679 FBgn0038679 FBtr0304715 CG6040 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12664 chr3R 27057678 27057854 + 13 NA TTS (FBgn0039833) protein_coding-TTS (FBgn0039833) 292 FBgn0039832 FBgn0039832 FBtr0085771 CG15563 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3717 chr2L 22395452 22395566 + 13 NA Intergenic Intergenic 32816 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_12576 chr3R 26732712 26732902 + 13 NA Intergenic Intergenic -4924 FBgn0053483 FBgn0053483 FBtr0089295 CG33483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4940 chr2R 9345510 9345580 + 13 NA exon (FBgn0000119, exon 3 of 7) protein_coding-exon (FBgn0000119, exon 3 of 7) 7376 FBgn0086757 FBgn0086757 FBtr0309887 cbs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10887 chr3R 15064534 15064627 + 13 NA exon (FBgn0038693, exon 15 of 28) protein_coding-exon (FBgn0038693, exon 15 of 28) 7271 FBgn0038693 FBgn0038693 FBtr0301694 unc79 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12670 chr3R 27067223 27067481 + 13 NA intron (FBgn0051005, intron 4 of 7) protein_coding-intron (FBgn0051005, intron 4 of 7) -6349 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4572 chr2R 6450394 6450448 + 13 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 5028 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2354 chr2L 15890329 15890511 + 13 NA exon (FBgn0041183, exon 8 of 9) protein_coding-exon (FBgn0041183, exon 8 of 9) 2515 FBgn0051824 FBgn0051824 FBtr0303311 CR31824 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6900 chr3L 2180297 2180351 + 13 NA Intergenic Intergenic -5606 FBgn0035313 FBgn0035313 FBtr0308229 CG13810 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1568 chr2L 11751764 11751818 + 13 NA Intergenic Intergenic 1739 FBgn0259960 FBgn0259960 FBtr0300308 CG42470 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6435 chr2RHet 1042940 1042994 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2736 chr2L 17727049 17727103 + 13 NA intron (FBgn0015609, intron 2 of 22) protein_coding-intron (FBgn0015609, intron 2 of 21) 22395 FBgn0262876 FBgn0262876 FBtr0306283 CG43231 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2025 chr2L 14575714 14575885 + 13 NA Intergenic Intergenic -12073 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9280 chr3R 2850204 2850310 + 13 NA Intergenic Intergenic -27800 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5844 chr2R 17418816 17418921 + 13 NA intron (FBgn0003731, intron 1 of 4) protein_coding-intron (FBgn0003731, intron 1 of 4) 5432 FBgn0050286 FBgn0050286 FBtr0300952 CG30286 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12524 chr3R 26269174 26269360 + 13 NA promoter-TSS (FBgn0039770) protein_coding-promoter-TSS (FBgn0039770) 54 FBgn0039770 FBgn0039770 FBtr0113310 CG15537 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_297 chr2L 1555314 1555412 + 13 NA exon (FBgn0261509, exon 1 of 10) protein_coding-exon (FBgn0261509, exon 1 of 10) 233 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10905 chr3R 15204585 15204726 + 13 NA intron (FBgn0086613, intron 12 of 13) protein_coding-intron (FBgn0086613, intron 12 of 13) -1708 FBgn0051245 FBgn0051245 FBtr0083773 CG31245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10084 chr3R 9394352 9394554 + 13 NA Intergenic Intergenic -6094 FBgn0264430 FBgn0264430 FBtr0332550 CR43848 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9312 chr3R 3101553 3101728 + 13 NA exon (FBgn0259172, exon 2 of 3) protein_coding-exon (FBgn0259172, exon 2 of 3) 4326 FBgn0037493 FBgn0037493 FBtr0081579 CG10032 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10164 chr3R 9941001 9941208 + 13 NA intron (FBgn0038205, intron 1 of 5) protein_coding-intron (FBgn0038205, intron 1 of 5) 3017 FBgn0038205 FBgn0038205 FBtr0082912 Kif19A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4116 chr2R 3149078 3149395 + 13 NA promoter-TSS (FBgn0033154) protein_coding-promoter-TSS (FBgn0033154) -480 FBgn0033154 FBgn0033154 FBtr0089022 CG1850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6405 chr2RHet 728345 728485 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12035 chr3R 24024877 24024967 + 13 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 52320 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12766 chr3R 27578220 27578328 + 13 NA TTS (FBgn0262384) pre_miRNA-TTS (FBgn0262384) 992 FBgn0262384 FBgn0262384 FBtr0304237 mir-1014 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3501 chr2L 21870342 21870516 + 13 NA Intergenic Intergenic -23798 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3718 chr2L 22403851 22403959 + 13 NA Intergenic Intergenic 24420 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_424 chr2L 2697468 2697636 + 13 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) -1115 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7248 chr3L 6937622 6937901 + 13 NA promoter-TSS (FBgn0035719) protein_coding-promoter-TSS (FBgn0035719) 1805 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1243 chr2L 8866955 8867062 + 13 NA TTS (FBgn0052983) protein_coding-TTS (FBgn0052983) 241 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1318 chr2L 9095784 9096020 + 13 NA Intergenic Intergenic -1725 FBgn0051609 FBgn0051609 FBtr0299873 CG31609 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1855 chr2L 13945723 13945923 + 13 NA exon (FBgn0028544, exon 3 of 3) protein_coding-exon (FBgn0028544, exon 3 of 3) 1649 FBgn0028544 FBgn0028544 FBtr0080557 CG16884 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4620 chr2R 7002878 7003059 + 13 NA Intergenic Intergenic 6385 FBgn0050489 FBgn0050489 FBtr0089419 Cyp12d1-p protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2358 chr2L 15905654 15905758 + 13 NA exon (FBgn0028645, exon 7 of 7) protein_coding-exon (FBgn0028645, exon 7 of 7) -3329 FBgn0051821 FBgn0051821 FBtr0080809 CG31821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6264 chr2R 20913493 20913610 + 13 NA intron (FBgn0004055, intron 2 of 4) protein_coding-intron (FBgn0004055, intron 2 of 4) -6352 FBgn0035092 FBgn0035092 FBtr0110861 Nplp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1746 chr2L 12943390 12943530 + 13 NA Intergenic Intergenic 17849 FBgn0040506 FBgn0040506 FBtr0310556 ACXE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6157 chr2R 20052355 20052498 + 13 NA intron (FBgn0034985, intron 1 of 8) protein_coding-intron (FBgn0034985, intron 1 of 8) 2413 FBgn0034985 FBgn0034985 FBtr0072257 CG3328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3914 chr2R 362754 362823 + 13 NA Intergenic Intergenic -4230 FBgn0260798 FBgn0260798 FBtr0302242 Gprk1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2394 chr2L 16035505 16035752 + 13 NA intron (FBgn0028644, intron 5 of 7) protein_coding-intron (FBgn0028644, intron 5 of 7) -8924 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4741 chr2R 7726998 7727167 + 13 NA promoter-TSS (FBgn0033654) protein_coding-promoter-TSS (FBgn0033654) -47 FBgn0033654 FBgn0033654 FBtr0088064 Sobp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6891 chr3L 2036470 2036525 + 13 NA TTS (FBgn0259701) protein_coding-TTS (FBgn0259701) 1727 FBgn0259701 FBgn0259701 FBtr0309792 CG42355 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5118 chr2R 10855027 10855273 + 13 NA intron (FBgn0033987, intron 1 of 5) protein_coding-intron (FBgn0033987, intron 1 of 5) 1965 FBgn0033987 FBgn0033987 FBtr0087411 ckn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12295 chr3R 25154619 25155001 + 13 NA Intergenic Intergenic -9474 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2774 chr2L 17856017 17856143 + 13 NA intron (FBgn0262018, intron 2 of 14) protein_coding-intron (FBgn0262018, intron 2 of 14) 19167 FBgn0262018 FBgn0262018 FBtr0303836 CadN2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3653 chr2L 22208179 22208283 + 13 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 6034 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_171 chr2L 1134512 1134658 + 13 NA promoter-TSS (FBgn0031306) protein_coding-promoter-TSS (FBgn0031306) -108 FBgn0031306 FBgn0031306 FBtr0077957 CG4577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3719 chr2L 22404831 22405163 + 13 NA Intergenic Intergenic 23328 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_11907 chr3R 23488647 23488829 + 13 NA intron (FBgn0039536, intron 1 of 28) protein_coding-intron (FBgn0039536, intron 1 of 28) 577 FBgn0039536 FBgn0039536 FBtr0330112 CG18437 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12450 chr3R 25642707 25642811 + 13 NA promoter-TSS (FBgn0039702) protein_coding-promoter-TSS (FBgn0039702) -587 FBgn0039702 FBgn0039702 FBtr0085533 Vps16B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9383 chr3R 3659014 3659120 + 13 NA intron (FBgn0085413, intron 1 of 10) protein_coding-intron (FBgn0085413, intron 2 of 11) 18984 FBgn0085413 FBgn0085413 FBtr0302036 CG34384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7278 chr3L 7055535 7055705 + 13 NA exon (FBgn0035733, exon 2 of 5) protein_coding-exon (FBgn0035733, exon 2 of 5) -3794 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10594 chr3R 13065049 13065103 + 13 NA intron (FBgn0038494, intron 3 of 4) protein_coding-intron (FBgn0038494, intron 3 of 5) 8522 FBgn0038494 FBgn0038494 FBtr0083411 beat-IIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2060 chr2L 14714031 14714160 + 13 NA TTS (FBgn0028855) protein_coding-TTS (FBgn0028855) 318 FBgn0085194 FBgn0085194 FBtr0112356 CG34165 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4544 chr2R 6241021 6241104 + 13 NA promoter-TSS (FBgn0262790) protein_coding-promoter-TSS (FBgn0262790) 189 FBgn0250840 FBgn0250840 FBtr0305904 CG12907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10662 chr3R 13545788 13546051 + 13 NA exon (FBgn0261987, exon 2 of 8) protein_coding-exon (FBgn0261987, exon 2 of 8) 745 FBgn0261987 FBgn0261987 FBtr0083508 Pxt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2567 chr2L 16989337 16989415 + 13 NA intron (FBgn0053179, intron 4 of 6) protein_coding-intron (FBgn0053179, intron 4 of 6) 4398 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8352 chr3L 17198983 17199163 + 13 NA intron (FBgn0260943, intron 3 of 14) protein_coding-intron (FBgn0260943, intron 3 of 14) 32239 FBgn0260943 FBgn0260943 FBtr0113427 Rbp6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3330 chr2L 21059786 21060150 + 13 NA exon (FBgn0032910, exon 4 of 8) protein_coding-exon (FBgn0032910, exon 4 of 8) 6935 FBgn0010395 FBgn0010395 FBtr0081461 betaInt-nu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13477 chrX 1845265 1845447 + 13 NA intron (FBgn0264562, intron 2 of 11) protein_coding-intron (FBgn0264562, intron 2 of 11) 9383 FBgn0264562 FBgn0264562 FBtr0333339 Hr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3432 chr2L 21711114 21711264 + 13 NA intron (FBgn0051619, intron 9 of 19) protein_coding-intron (FBgn0051619, intron 9 of 18) 27007 FBgn0051619 FBgn0051619 FBtr0307497 CG31619 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2248 chr2L 15428367 15428529 + 13 NA Intergenic Intergenic -2863 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12123 chr3R 24335891 24335977 + 13 NA exon (FBgn0013813, exon 35 of 47) protein_coding-exon (FBgn0013813, exon 35 of 47) 10303 FBgn0051051 FBgn0051051 FBtr0085296 CG31051 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7879 chr3L 13196971 13197037 + 13 NA Intergenic Intergenic -7310 FBgn0052129 FBgn0052129 FBtr0075828 tRNA:CR32129 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7237 chr3L 6875794 6875866 + 13 NA Intergenic Intergenic 31234 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4385 chr2R 4962673 4962832 + 13 NA intron (FBgn0011746, intron 3 of 4) protein_coding-intron (FBgn0011746, intron 3 of 4) -3480 FBgn0025709 FBgn0025709 FBtr0088562 CG8083 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12944 chr4 572671 572756 + 13 NA exon (FBgn0026869, exon 2 of 6) protein_coding-exon (FBgn0026869, exon 2 of 6) 5767 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1934 chr2L 14320307 14320498 + 13 NA exon (FBgn0261563, exon 5 of 16) protein_coding-exon (FBgn0261563, exon 5 of 16) -8027 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_436 chr2L 2806512 2806638 + 13 NA intron (FBgn0031461, intron 1 of 4) protein_coding-intron (FBgn0031461, intron 1 of 4) -1746 FBgn0031461 FBgn0031461 FBtr0077721 daw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5885 chr2R 17483121 17483323 + 13 NA Intergenic Intergenic 5331 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1263 chr2L 8887650 8887754 + 13 NA Intergenic Intergenic -3787 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1698 chr2L 12748694 12748842 + 13 NA Intergenic Intergenic 13072 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13310 chrUextra 416443 416640 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2183 chr2L 15174940 15175089 + 13 NA intron (FBgn0028888, intron 2 of 5) protein_coding-intron (FBgn0028888, intron 2 of 5) 25395 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8557 chr3L 19339689 19339743 + 13 NA intron (FBgn0052206, intron 12 of 13) protein_coding-intron (FBgn0052206, intron 12 of 13) -9007 FBgn0003089 FBgn0003089 FBtr0075012 pip protein_coding Nup98-S2-pascual-garcia2017_R1_peak_486 chr2L 3293385 3293570 + 13 NA exon (FBgn0031515, exon 2 of 7) protein_coding-exon (FBgn0031515, exon 2 of 7) 1229 FBgn0031515 FBgn0031515 FBtr0305575 CG9664 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6637 chr2RHet 2265126 2265309 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12383 chr3R 25468596 25468830 + 13 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 16993 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2765 chr2L 17825891 17826043 + 13 NA intron (FBgn0262018, intron 3 of 14) protein_coding-intron (FBgn0262018, intron 2 of 13) -13295 FBgn0262017 FBgn0262017 FBtr0303837 CG42830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12878 chr3RHet 1744941 1745030 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10308 chr3R 11324533 11324675 + 13 NA Intergenic Intergenic 4280 FBgn0038345 FBgn0038345 FBtr0083148 CG5213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5074 chr2R 10540370 10540536 + 13 NA Intergenic Intergenic 5807 FBgn0033952 FBgn0033952 FBtr0087482 Adgf-E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12072 chr3R 24136191 24136351 + 13 NA Intergenic Intergenic -5944 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1811 chr2L 13486162 13486216 + 13 NA intron (FBgn0263354, intron 2 of 6) protein_coding-intron (FBgn0263354, intron 4 of 8) 24415 FBgn0263354 FBgn0263354 FBtr0303440 CG42784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11730 chr3R 22664385 22664636 + 13 NA exon (FBgn0262473, exon 3 of 4) protein_coding-exon (FBgn0262473, exon 3 of 4) 22583 FBgn0262379 FBgn0262379 FBtr0304222 mir-1012 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4576 chr2R 6509128 6509223 + 13 NA promoter-TSS (FBgn0033538) protein_coding-promoter-TSS (FBgn0033538) -533 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13458 chrX 1490144 1490287 + 13 NA intron (FBgn0025390, intron 2 of 7) protein_coding-intron (FBgn0025390, intron 2 of 7) -16159 FBgn0000210 FBgn0000210 FBtr0303563 br protein_coding Nup98-S2-pascual-garcia2017_R1_peak_373 chr2L 2185969 2186023 + 13 NA TTS (FBgn0264082) protein_coding-TTS (FBgn0264082) -1011 FBgn0051946 FBgn0051946 FBtr0077834 tRNA:CR31946 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9173 chr3R 2292436 2292490 + 13 NA Intergenic Intergenic -1671 FBgn0037447 FBgn0037447 FBtr0081729 Neurochondrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1042 chr2L 8051365 8051560 + 13 NA exon (FBgn0031981, exon 5 of 6) protein_coding-exon (FBgn0031981, exon 5 of 6) 7991 FBgn0031981 FBgn0031981 FBtr0079541 CG7466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_25 chr2L 335417 335641 + 13 NA exon (FBgn0004611, exon 5 of 17) protein_coding-exon (FBgn0004611, exon 5 of 17) -3194 FBgn0051921 FBgn0051921 FBtr0078096 CG31921 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3068 chr2L 19684462 19684516 + 13 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 16479 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5493 chr2R 14354994 14355160 + 13 NA intron (FBgn0028496, intron 10 of 18) protein_coding-intron (FBgn0028496, intron 10 of 18) -13110 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5964 chr2R 18239297 18239505 + 13 NA intron (FBgn0034720, intron 2 of 13) protein_coding-intron (FBgn0034720, intron 2 of 13) 3589 FBgn0034721 FBgn0034721 FBtr0071819 CG11298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6544 chr2RHet 1915678 1915852 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13544 chrX 5366917 5367061 + 13 NA intron (FBgn0029768, intron 2 of 5) protein_coding-intron (FBgn0029768, intron 2 of 5) 23074 FBgn0029769 FBgn0029769 FBtr0070793 CG3239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12276 chr3R 25004532 25004634 + 13 NA intron (FBgn0039647, intron 2 of 7) protein_coding-intron (FBgn0039647, intron 2 of 6) 13068 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2792 chr2L 17942040 17942137 + 13 NA Intergenic Intergenic -21326 FBgn0032656 FBgn0032656 FBtr0290267 CG5674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5274 chr2R 12278877 12278957 + 13 NA intron (FBgn0264273, intron 1 of 15) protein_coding-intron (FBgn0264273, intron 1 of 15) 4888 FBgn0264273 FBgn0264273 FBtr0100001 Sema-2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9222 chr3R 2587030 2587127 + 13 NA Intergenic Intergenic -1879 FBgn0000166 FBgn0000166 FBtr0081668 bcd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8832 chr3L 24199587 24199718 + 13 NA intron (FBgn0011288, intron 4 of 7) protein_coding-intron (FBgn0011288, intron 4 of 7) -118315 FBgn0259697 FBgn0259697 FBtr0113473 nvd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2076 chr2L 14760995 14761130 + 13 NA exon (FBgn0028870, exon 1 of 1) protein_coding-exon (FBgn0028870, exon 1 of 1) 295 FBgn0028870 FBgn0028870 FBtr0080670 CG4691 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8107 chr3L 15028528 15028652 + 13 NA intron (FBgn0261090, intron 2 of 7) protein_coding-intron (FBgn0261090, intron 2 of 7) -1294 FBgn0261090 FBgn0261090 FBtr0299849 Sytbeta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2999 chr2L 19277897 19278048 + 13 NA Intergenic Intergenic -15079 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6509 chr2RHet 1852338 1852472 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_289 chr2L 1515626 1515740 + 13 NA Intergenic Intergenic 1795 FBgn0031345 FBgn0031345 FBtr0077919 CG18132 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13177 chrU 1589536 1589590 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8244 chr3L 16302182 16302397 + 13 NA promoter-TSS (FBgn0036602) protein_coding-promoter-TSS (FBgn0036602) 249 FBgn0052160 FBgn0052160 FBtr0308930 CR32160 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10707 chr3R 13796147 13796201 + 13 NA intron (FBgn0263995, intron 3 of 11) protein_coding-intron (FBgn0263995, intron 3 of 11) 26346 FBgn0263995 FBgn0263995 FBtr0330280 cpo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9166 chr3R 2236483 2236724 + 13 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 4024 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9132 chr3R 1967780 1967839 + 13 NA Intergenic Intergenic -14132 FBgn0263498 FBgn0263498 FBtr0309514 CR43487 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1938 chr2L 14324390 14324457 + 13 NA exon (FBgn0261563, exon 10 of 16) protein_coding-exon (FBgn0261563, exon 10 of 16) -4006 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1990 chr2L 14450492 14450608 + 13 NA exon (FBgn0028844, exon 1 of 1) protein_coding-exon (FBgn0028844, exon 1 of 1) 372 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2133 chr2L 14962478 14962620 + 13 NA intron (FBgn0259213, intron 2 of 19) protein_coding-intron (FBgn0259213, intron 2 of 19) 9751 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1586 chr2L 11833104 11833158 + 13 NA intron (FBgn0259225, intron 6 of 9) protein_coding-intron (FBgn0259225, intron 6 of 9) -3726 FBgn0000588 FBgn0000588 FBtr0080325 esc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8610 chr3L 20620321 20620530 + 13 NA Intergenic Intergenic -6666 FBgn0001323 FBgn0001323 FBtr0078212 knrl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5858 chr2R 17451406 17451692 + 13 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 11991 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9420 chr3R 3956729 3956783 + 13 NA Intergenic Intergenic 4420 FBgn0037551 FBgn0037551 FBtr0081794 Gie protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12418 chr3R 25528514 25528605 + 13 NA Intergenic Intergenic 10246 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5664 chr2R 15858451 15858643 + 13 NA Intergenic Intergenic -8202 FBgn0034479 FBgn0034479 FBtr0305676 CG8654 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2044 chr2L 14627588 14627642 + 13 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 11346 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3757 chr2L 22584652 22584859 + 13 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 59772 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2911 chr2L 18668877 18668996 + 13 NA exon (FBgn0263079, exon 3 of 5) protein_coding-exon (FBgn0263079, exon 3 of 5) 2251 FBgn0263079 FBgn0263079 FBtr0306921 CG43338 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_773 chr2L 5504981 5505035 + 13 NA Intergenic Intergenic -12611 FBgn0031707 FBgn0031707 FBtr0329966 CG14020 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1941 chr2L 14329303 14329459 + 13 NA exon (FBgn0261529, exon 3 of 10) protein_coding-exon (FBgn0261529, exon 3 of 10) 952 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13451 chrX 1401766 1401874 + 13 NA promoter-TSS (FBgn0053513) protein_coding-promoter-TSS (FBgn0053513) 22 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1930 chr2L 14317994 14318191 + 13 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -10337 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5022 chr2R 10063113 10063236 + 13 NA intron (FBgn0000289, intron 1 of 11) protein_coding-intron (FBgn0000289, intron 1 of 9) 1999 FBgn0000289 FBgn0000289 FBtr0112795 cg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7320 chr3L 7542908 7543095 + 13 NA Intergenic Intergenic -7444 FBgn0052376 FBgn0052376 FBtr0076827 CG32376 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11497 chr3R 21736899 21737006 + 13 NA exon (FBgn0250757, exon 6 of 10) protein_coding-exon (FBgn0250757, exon 6 of 10) 4200 FBgn0250757 FBgn0250757 FBtr0290137 CG42235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1137 chr2L 8635286 8635390 + 13 NA intron (FBgn0011259, intron 4 of 20) protein_coding-intron (FBgn0011259, intron 4 of 21) 15310 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1999 chr2L 14472414 14472507 + 13 NA Intergenic Intergenic -18402 FBgn0005771 FBgn0005771 FBtr0080643 noc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8063 chr3L 14557693 14557773 + 13 NA Intergenic Intergenic -2807 FBgn0261816 FBgn0261816 FBtr0303303 CG42758 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3295 chr2L 20772934 20773029 + 13 NA intron (FBgn0000251, intron 1 of 1) protein_coding-intron (FBgn0000251, intron 1 of 1) 2087 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13552 chrX 5632040 5632157 + 13 NA promoter-TSS (FBgn0052758) protein_coding-promoter-TSS (FBgn0052758) 5314 FBgn0029795 FBgn0029795 FBtr0070806 CG15773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1924 chr2L 14305775 14305974 + 13 NA intron (FBgn0261563, intron 1 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -10480 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_372 chr2L 2185225 2185321 + 13 NA exon (FBgn0264082, exon 2 of 2) protein_coding-exon (FBgn0264082, exon 2 of 2) 1384 FBgn0264082 FBgn0264082 FBtr0330684 CG43751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6953 chr3L 2835999 2836108 + 13 NA intron (FBgn0263392, intron 5 of 10) protein_coding-intron (FBgn0263392, intron 4 of 9) 43105 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7640 chr3L 11119540 11119664 + 13 NA intron (FBgn0260795, intron 1 of 6) protein_coding-intron (FBgn0260795, intron 1 of 6) -2900 FBgn0260795 FBgn0260795 FBtr0332705 CG42575 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3046 chr2L 19518453 19518580 + 13 NA promoter-TSS (FBgn0032798) protein_coding-promoter-TSS (FBgn0032798) 49 FBgn0263095 FBgn0263095 FBtr0307113 CR43363 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3427 chr2L 21668444 21668988 + 13 NA exon (FBgn0032957, exon 7 of 11) protein_coding-exon (FBgn0032957, exon 7 of 11) 8814 FBgn0032957 FBgn0032957 FBtr0085917 CG2225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7943 chr3L 13666648 13666799 + 13 NA intron (FBgn0264001, intron 4 of 13) protein_coding-intron (FBgn0264001, intron 4 of 13) 52786 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_9810 chr3R 7188083 7188227 + 13 NA intron (FBgn0004595, intron 2 of 7) protein_coding-intron (FBgn0004595, intron 2 of 7) -9302 FBgn0026063 FBgn0026063 FBtr0082408 KP78b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_723 chr2L 5131660 5131889 + 13 NA exon (FBgn0261836, exon 7 of 18) protein_coding-exon (FBgn0261836, exon 7 of 18) -19975 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3349 chr2L 21193714 21193803 + 13 NA intron (FBgn0011829, intron 2 of 7) protein_coding-intron (FBgn0011829, intron 2 of 7) 1744 FBgn0011829 FBgn0011829 FBtr0081496 Ret protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4144 chr2R 3301014 3301373 + 13 NA Intergenic Intergenic -4303 FBgn0033167 FBgn0033167 FBtr0113049 CG1701 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4882 chr2R 8889722 8889906 + 13 NA exon (FBgn0008654, exon 5 of 6) protein_coding-exon (FBgn0008654, exon 5 of 6) 5808 FBgn0008654 FBgn0008654 FBtr0087793 Su(z)2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1758 chr2L 13024764 13024924 + 13 NA exon (FBgn0262160, exon 7 of 7) protein_coding-exon (FBgn0262160, exon 7 of 7) -3537 FBgn0028965 FBgn0028965 FBtr0080427 A16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10824 chr3R 14478461 14478618 + 13 NA exon (FBgn0051224, exon 5 of 6) protein_coding-exon (FBgn0051224, exon 5 of 6) 6424 FBgn0051224 FBgn0051224 FBtr0083691 CG31224 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1305 chr2L 9044978 9045122 + 13 NA Intergenic Intergenic -19646 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2150 chr2L 15023326 15023490 + 13 NA intron (FBgn0260446, intron 2 of 15) protein_coding-intron (FBgn0260446, intron 2 of 15) -3501 FBgn0053310 FBgn0053310 FBtr0080698 CG33310 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9595 chr3R 5212056 5212320 + 13 NA intron (FBgn0000723, intron 3 of 13) protein_coding-intron (FBgn0000723, intron 3 of 12) 8080 FBgn0000723 FBgn0000723 FBtr0082054 Fps85D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3424 chr2L 21650740 21650903 + 13 NA Intergenic Intergenic -6735 FBgn0262620 FBgn0262620 FBtr0305481 CG43144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4326 chr2R 4710031 4710132 + 13 NA intron (FBgn0024189, intron 4 of 21) protein_coding-intron (FBgn0024189, intron 4 of 20) -3815 FBgn0050350 FBgn0050350 FBtr0088636 CG30350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5705 chr2R 16104547 16104695 + 13 NA Intergenic Intergenic -4497 FBgn0034483 FBgn0034483 FBtr0086324 CG16894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7813 chr3L 12652961 12653015 + 13 NA Intergenic Intergenic -6798 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3446 chr2L 21742624 21742816 + 13 NA intron (FBgn0086779, intron 7 of 10) protein_coding-intron (FBgn0086779, intron 5 of 8) 14746 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2293 chr2L 15561082 15561271 + 13 NA intron (FBgn0028370, intron 2 of 3) protein_coding-intron (FBgn0028370, intron 2 of 3) 8453 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7574 chr3L 10605090 10605144 + 13 NA Intergenic Intergenic 11559 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_227 chr2L 1381961 1382123 + 13 NA exon (FBgn0002543, exon 14 of 14) protein_coding-exon (FBgn0002543, exon 14 of 14) 13953 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9102 chr3R 1706270 1706432 + 13 NA intron (FBgn0083949, intron 10 of 16) protein_coding-intron (FBgn0083949, intron 10 of 16) -19332 FBgn0037391 FBgn0037391 FBtr0114518 CG2017 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1982 chr2L 14438282 14438373 + 13 NA Intergenic Intergenic 12595 FBgn0028844 FBgn0028844 FBtr0300837 CG15283 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10618 chr3R 13253274 13253370 + 13 NA intron (FBgn0038511, intron 1 of 9) protein_coding-intron (FBgn0038511, intron 1 of 9) 1828 FBgn0038511 FBgn0038511 FBtr0083442 CG5873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5728 chr2R 16328915 16329092 + 13 NA intron (FBgn0086604, intron 3 of 18) protein_coding-intron (FBgn0086604, intron 3 of 15) 17163 FBgn0086604 FBgn0086604 FBtr0112774 CG12484 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11516 chr3R 21791399 21791557 + 13 NA exon (FBgn0000206, exon 5 of 6) protein_coding-exon (FBgn0000206, exon 5 of 6) 3762 FBgn0000206 FBgn0000206 FBtr0084949 boss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9223 chr3R 2587986 2588163 + 13 NA promoter-TSS (FBgn0000071) protein_coding-promoter-TSS (FBgn0000071) -1054 FBgn0000071 FBgn0000071 FBtr0081620 Ama protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6691 chr2RHet 3232211 3232311 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4941 chr2R 9346846 9347021 + 13 NA exon (FBgn0000119, exon 3 of 7) protein_coding-exon (FBgn0000119, exon 3 of 7) 8764 FBgn0086757 FBgn0086757 FBtr0309887 cbs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10419 chr3R 11942192 11942301 + 13 NA Intergenic Intergenic -12205 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2621 chr2L 17183123 17183260 + 13 NA exon (FBgn0046888, exon 2 of 3) protein_coding-exon (FBgn0046888, exon 2 of 3) 1253 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7315 chr3L 7465058 7465173 + 13 NA exon (FBgn0035788, exon 1 of 1) protein_coding-exon (FBgn0035788, exon 1 of 1) 456 FBgn0035788 FBgn0035788 FBtr0076862 CG8541 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2982 chr2L 19213687 19214116 + 13 NA Intergenic Intergenic 23555 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2425 chr2L 16132890 16132944 + 13 NA promoter-TSS (FBgn0028884) protein_coding-promoter-TSS (FBgn0028884) -591 FBgn0028884 FBgn0028884 FBtr0080816 CG4892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_322 chr2L 1625494 1625549 + 13 NA Intergenic Intergenic -11339 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3758 chr2L 22587008 22587100 + 13 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 57473 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2826 chr2L 18047440 18047658 + 13 NA intron (FBgn0243486, intron 3 of 14) protein_coding-intron (FBgn0243486, intron 3 of 14) -30720 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1554 chr2L 11563282 11563453 + 13 NA Intergenic Intergenic 23466 FBgn0028412 FBgn0028412 FBtr0305324 Mst33A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12912 chr4 124980 125094 + 13 NA exon (FBgn0085432, exon 13 of 14) protein_coding-exon (FBgn0085432, exon 13 of 14) 25041 FBgn0011747 FBgn0011747 FBtr0089173 Ank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3958 chr2R 843626 843916 + 13 NA intron (FBgn0040849, intron 1 of 4) protein_coding-intron (FBgn0040849, intron 1 of 4) 6599 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1138 chr2L 8638227 8638409 + 13 NA intron (FBgn0011259, intron 4 of 20) protein_coding-intron (FBgn0011259, intron 4 of 21) 18290 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5122 chr2R 10884681 10884786 + 13 NA Intergenic Intergenic 2578 FBgn0264378 FBgn0264378 FBtr0332258 CR43830 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1879 chr2L 14058878 14059031 + 13 NA intron (FBgn0028875, intron 2 of 13) protein_coding-intron (FBgn0028875, intron 2 of 13) 11372 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12361 chr3R 25394796 25394905 + 13 NA Intergenic Intergenic 12741 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_526 chr2L 3597126 3597180 + 13 NA Intergenic Intergenic -6852 FBgn0264371 FBgn0264371 FBtr0332223 CR43823 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_553 chr2L 3797913 3797967 + 13 NA exon (FBgn0031571, exon 5 of 12) protein_coding-exon (FBgn0031571, exon 5 of 12) -7759 FBgn0021800 FBgn0021800 FBtr0077498 l(2)k16918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_324 chr2L 1636088 1636170 + 13 NA Intergenic Intergenic -15129 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1613 chr2L 12160389 12160580 + 13 NA intron (FBgn0051760, intron 3 of 12) protein_coding-intron (FBgn0051760, intron 4 of 13) -1311 FBgn0051861 FBgn0051861 FBtr0302986 CG31861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_369 chr2L 2135574 2135651 + 13 NA exon (FBgn0004507, exon 3 of 4) protein_coding-exon (FBgn0004507, exon 3 of 4) 4797 FBgn0004507 FBgn0004507 FBtr0100485 GlyP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2456 chr2L 16373829 16373934 + 13 NA Intergenic Intergenic 7962 FBgn0028841 FBgn0028841 FBtr0080859 jhamt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11461 chr3R 21214180 21214234 + 13 NA intron (FBgn0004509, intron 5 of 5) protein_coding-intron (FBgn0004509, intron 4 of 11) 4769 FBgn0051437 FBgn0051437 FBtr0084834 CG31437 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10107 chr3R 9561223 9561322 + 13 NA promoter-TSS (FBgn0085412) protein_coding-promoter-TSS (FBgn0085412) -17374 FBgn0038175 FBgn0038175 FBtr0082838 CG9602 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7210 chr3L 6634425 6634532 + 13 NA Intergenic Intergenic 17346 FBgn0004619 FBgn0004619 FBtr0076982 Glu-RI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8923 chr3LHet 2231651 2231705 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10809 chr3R 14423249 14423374 + 13 NA exon (FBgn0038629, exon 4 of 9) protein_coding-exon (FBgn0038629, exon 4 of 9) -1167 FBgn0038630 FBgn0038630 FBtr0083636 CG14305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1261 chr2L 8885196 8885305 + 13 NA Intergenic Intergenic -6239 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12115 chr3R 24311302 24311511 + 13 NA exon (FBgn0039585, exon 2 of 2) protein_coding-exon (FBgn0039585, exon 2 of 2) 1127 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12325 chr3R 25246057 25246121 + 13 NA intron (FBgn0004369, intron 5 of 18) protein_coding-intron (FBgn0004369, intron 5 of 18) -59331 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9066 chr3R 1351265 1351453 + 13 NA intron (FBgn0010051, intron 1 of 18) protein_coding-intron (FBgn0010051, intron 1 of 18) -1942 FBgn0010051 FBgn0010051 FBtr0078687 Itp-r83A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10758 chr3R 14140129 14140221 + 13 NA promoter-TSS (FBgn0038603) protein_coding-promoter-TSS (FBgn0038603) -3547 FBgn0038603 FBgn0038603 FBtr0083592 PKD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4304 chr2R 4621325 4621379 + 13 NA promoter-TSS (FBgn0086784) protein_coding-promoter-TSS (FBgn0086784) 457 FBgn0086784 FBgn0086784 FBtr0088716 stmA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3505 chr2L 21874701 21874896 + 13 NA Intergenic Intergenic -19429 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_62 chr2L 738514 738736 + 13 NA exon (FBgn0026438, exon 6 of 8) protein_coding-exon (FBgn0026438, exon 6 of 8) 5770 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_335 chr2L 1826733 1826834 + 13 NA promoter-TSS (FBgn0051664) protein_coding-promoter-TSS (FBgn0051664) -405 FBgn0051664 FBgn0051664 FBtr0303377 CG31664 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12859 chr3RHet 1133925 1134072 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5406 chr2R 13549175 13549229 + 13 NA Intergenic Intergenic -3981 FBgn0034258 FBgn0034258 FBtr0086836 eIF3-S8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11688 chr3R 22499279 22499403 + 13 NA intron (FBgn0250908, intron 1 of 8) protein_coding-intron (FBgn0250908, intron 1 of 8) 8347 FBgn0250908 FBgn0250908 FBtr0290328 beat-VII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6300 chr2RHet 47199 47373 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5213 chr2R 11713290 11713438 + 13 NA TTS (FBgn0003130) protein_coding-TTS (FBgn0003130) -4764 FBgn0053465 FBgn0053465 FBtr0301048 CG33465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3682 chr2L 22299829 22299933 + 13 NA Intergenic Intergenic -40741 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_10228 chr3R 10646967 10647045 + 13 NA promoter-TSS (FBgn0053555) protein_coding-promoter-TSS (FBgn0053555) 19511 FBgn0038262 FBgn0038262 FBtr0082993 CG14857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2472 chr2L 16472274 16472416 + 13 NA exon (FBgn0005677, exon 6 of 11) protein_coding-exon (FBgn0005677, exon 6 of 11) 13639 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5206 chr2R 11612917 11612999 + 13 NA Intergenic Intergenic -1945 FBgn0050089 FBgn0050089 FBtr0087285 CG30089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1176 chr2L 8763860 8764182 + 13 NA Intergenic Intergenic 4687 FBgn0032066 FBgn0032066 FBtr0079744 CG9463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1211 chr2L 8813008 8813062 + 13 NA Intergenic Intergenic 3635 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12121 chr3R 24329312 24329568 + 13 NA exon (FBgn0013813, exon 26 of 47) protein_coding-exon (FBgn0013813, exon 26 of 47) 16765 FBgn0013813 FBgn0013813 FBtr0301303 Dhc98D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1843 chr2L 13823412 13823573 + 13 NA TTS (FBgn0004406) protein_coding-TTS (FBgn0004406) 2244 FBgn0000153 FBgn0000153 FBtr0080542 b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8589 chr3L 20152304 20152500 + 13 NA intron (FBgn0261556, intron 3 of 12) protein_coding-intron (FBgn0261556, intron 4 of 14) -18695 FBgn0036942 FBgn0036942 FBtr0074864 CG7328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12271 chr3R 24993548 24993730 + 13 NA exon (FBgn0039645, exon 3 of 6) protein_coding-exon (FBgn0039645, exon 3 of 6) 2124 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11852 chr3R 23263674 23263737 + 13 NA promoter-TSS (FBgn0016061) protein_coding-promoter-TSS (FBgn0016061) -501 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4138 chr2R 3235831 3235938 + 13 NA exon (FBgn0033159, exon 7 of 24) protein_coding-exon (FBgn0033159, exon 7 of 24) 33490 FBgn0033159 FBgn0033159 FBtr0306787 Dscam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5506 chr2R 14409045 14409232 + 13 NA intron (FBgn0262476, intron 4 of 8) protein_coding-intron (FBgn0262476, intron 4 of 10) 7009 FBgn0262476 FBgn0262476 FBtr0304867 CG43066 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10130 chr3R 9693644 9693713 + 13 NA exon (FBgn0008646, exon 4 of 4) protein_coding-exon (FBgn0008646, exon 4 of 4) 6960 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5662 chr2R 15836695 15836876 + 13 NA Intergenic Intergenic 2059 FBgn0050447 FBgn0050447 FBtr0306043 CG30447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_621 chr2L 4324583 4324958 + 13 NA TTS (FBgn0010473) protein_coding-TTS (FBgn0010473) 197 FBgn0028482 FBgn0028482 FBtr0077425 CG16857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_290 chr2L 1527025 1527108 + 13 NA Intergenic Intergenic 4375 FBgn0026397 FBgn0026397 FBtr0077874 Or22b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6901 chr3L 2197549 2197603 + 13 NA exon (FBgn0035315, exon 2 of 2) protein_coding-exon (FBgn0035315, exon 2 of 2) 145 FBgn0035315 FBgn0035315 FBtr0072872 CG8960 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1171 chr2L 8760310 8760431 + 13 NA Intergenic Intergenic 8065 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10503 chr3R 12441474 12441572 + 13 NA exon (FBgn0038449, exon 2 of 4) protein_coding-exon (FBgn0038449, exon 2 of 4) 490 FBgn0038449 FBgn0038449 FBtr0083329 CG17562 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7662 chr3L 11471723 11471861 + 13 NA Intergenic Intergenic 3734 FBgn0028668 FBgn0028668 FBtr0076091 Vha16-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5843 chr2R 17416449 17416600 + 13 NA intron (FBgn0003731, intron 1 of 4) protein_coding-intron (FBgn0003731, intron 1 of 4) -7171 FBgn0050289 FBgn0050289 FBtr0071697 CG30289 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4545 chr2R 6242429 6242626 + 13 NA TTS (FBgn0250840) protein_coding-TTS (FBgn0250840) 809 FBgn0263271 FBgn0263271 FBtr0329874 CG43397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1148 chr2L 8651717 8652141 + 13 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -21223 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10986 chr3R 15667071 15667171 + 13 NA exon (FBgn0051459, exon 2 of 4) protein_coding-exon (FBgn0051459, exon 2 of 4) 554 FBgn0051459 FBgn0051459 FBtr0083812 CG31459 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5874 chr2R 17468891 17469341 + 13 NA Intergenic Intergenic -1881 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10017 chr3R 8887180 8887345 + 13 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 3781 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5392 chr2R 13395422 13395482 + 13 NA TTS (FBgn0262720) protein_coding-TTS (FBgn0262720) -1997 FBgn0085222 FBgn0085222 FBtr0112386 CG34193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13493 chrX 2645213 2645339 + 13 NA exon (FBgn0263505, exon 1 of 1) ncRNA-exon (FBgn0263505, exon 1 of 1) 173 FBgn0263505 FBgn0263505 FBtr0309525 CR43494 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7934 chr3L 13597539 13597628 + 13 NA intron (FBgn0264001, intron 5 of 13) protein_coding-intron (FBgn0264001, intron 4 of 12) -16354 FBgn0262415 FBgn0262415 FBtr0304350 mir-289 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2814 chr2L 17996258 17996384 + 13 NA Intergenic Intergenic 5903 FBgn0051742 FBgn0051742 FBtr0081025 CG31742 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4260 chr2R 4253513 4253863 + 13 NA promoter-TSS (FBgn0050363) protein_coding-promoter-TSS (FBgn0050363) 477 FBgn0050362 FBgn0050362 FBtr0088769 boly protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2302 chr2L 15585054 15585401 + 13 NA Intergenic Intergenic 26742 FBgn0028950 FBgn0028950 FBtr0080785 CG15255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11097 chr3R 16277612 16277666 + 13 NA intron (FBgn0262869, intron 3 of 20) protein_coding-intron (FBgn0262869, intron 3 of 17) 32634 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11764 chr3R 22872810 22872894 + 13 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -2090 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11383 chr3R 19495275 19495379 + 13 NA promoter-TSS (FBgn0051145) protein_coding-promoter-TSS (FBgn0051145) 51 FBgn0051145 FBgn0051145 FBtr0290057 CG31145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_528 chr2L 3605215 3605306 + 13 NA exon (FBgn0002985, exon 2 of 2) protein_coding-exon (FBgn0002985, exon 2 of 2) 1488 FBgn0002985 FBgn0002985 FBtr0077557 odd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1711 chr2L 12802470 12802627 + 13 NA Intergenic Intergenic 5792 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8964 chr3R 500894 501024 + 13 NA intron (FBgn0263346, intron 3 of 14) protein_coding-intron (FBgn0263346, intron 3 of 8) 15371 FBgn0053927 FBgn0053927 FBtr0091931 CG33927 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7222 chr3L 6740356 6740440 + 13 NA promoter-TSS (FBgn0035713) protein_coding-promoter-TSS (FBgn0035713) -4134 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5526 chr2R 14646589 14646798 + 13 NA exon (FBgn0259682, exon 3 of 5) protein_coding-exon (FBgn0259682, exon 3 of 5) 1894 FBgn0259682 FBgn0259682 FBtr0299942 CG42351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8530 chr3L 18778991 18779160 + 13 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -20231 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6999 chr3L 3512707 3512884 + 13 NA promoter-TSS (FBgn0001254) protein_coding-promoter-TSS (FBgn0001254) -114 FBgn0001254 FBgn0001254 FBtr0073141 ImpE2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4154 chr2R 3312842 3313018 + 13 NA intron (FBgn0003460, intron 4 of 6) protein_coding-intron (FBgn0003460, intron 4 of 6) 3168 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12689 chr3R 27178121 27178355 + 13 NA intron (FBgn0085376, intron 4 of 7) protein_coding-intron (FBgn0085376, intron 4 of 16) -19911 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9880 chr3R 7871426 7871486 + 13 NA Intergenic Intergenic 3479 FBgn0037987 FBgn0037987 FBtr0082553 CG14739 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4765 chr2R 7889650 7889752 + 13 NA exon (FBgn0004839, exon 7 of 7) protein_coding-exon (FBgn0004839, exon 7 of 7) 13063 FBgn0033673 FBgn0033673 FBtr0088043 CG8298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12251 chr3R 24839408 24839543 + 13 NA intron (FBgn0039620, intron 1 of 9) protein_coding-intron (FBgn0039620, intron 1 of 9) -4921 FBgn0263579 FBgn0263579 FBtr0309743 mir-4947 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2538 chr2L 16876596 16876801 + 13 NA intron (FBgn0051781, intron 3 of 3) ncRNA-intron (FBgn0051781, intron 1 of 1) 2592 FBgn0052832 FBgn0052832 FBtr0080960 CG32832 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12894 chr3RHet 2099478 2099570 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5062 chr2R 10400236 10400425 + 13 NA TTS (FBgn0261823) protein_coding-TTS (FBgn0261823) -1209 FBgn0050197 FBgn0050197 FBtr0087494 CG30197 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_53 chr2L 705994 706178 + 13 NA exon (FBgn0000497, exon 2 of 12) protein_coding-exon (FBgn0000497, exon 2 of 12) 8882 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6673 chr2RHet 2592850 2592966 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2681 chr2L 17386982 17387092 + 13 NA intron (FBgn0020503, intron 1 of 13) protein_coding-intron (FBgn0020503, intron 3 of 16) 2022 FBgn0020503 FBgn0020503 FBtr0332452 CLIP-190 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_544 chr2L 3731474 3731664 + 13 NA intron (FBgn0031568, intron 1 of 12) protein_coding-intron (FBgn0031568, intron 1 of 12) 1103 FBgn0031568 FBgn0031568 FBtr0273188 CG10019 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2666 chr2L 17343571 17343786 + 13 NA Intergenic Intergenic 10990 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9297 chr3R 3005053 3005229 + 13 NA exon (FBgn0002306, exon 6 of 10) protein_coding-exon (FBgn0002306, exon 6 of 10) 7234 FBgn0037482 FBgn0037482 FBtr0081605 CG10055 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8785 chr3L 23803351 23803474 + 13 NA Intergenic Intergenic 26081 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6814 chr3L 1259205 1259415 + 13 NA intron (FBgn0035199, intron 1 of 4) protein_coding-intron (FBgn0035199, intron 1 of 4) -6406 FBgn0035199 FBgn0035199 FBtr0072661 CG9134 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8489 chr3L 18183429 18183607 + 13 NA Intergenic Intergenic -4777 FBgn0003997 FBgn0003997 FBtr0332862 W protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3372 chr2L 21288897 21288995 + 13 NA exon (FBgn0032940, exon 8 of 12) protein_coding-exon (FBgn0032940, exon 8 of 12) -4673 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12501 chr3R 25981159 25981332 + 13 NA exon (FBgn0039749, exon 3 of 6) protein_coding-exon (FBgn0039749, exon 3 of 6) 3464 FBgn0039748 FBgn0039748 FBtr0085567 CG15529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12039 chr3R 24038100 24038229 + 13 NA intron (FBgn0085383, intron 3 of 8) protein_coding-intron (FBgn0085383, intron 3 of 8) 51180 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2228 chr2L 15372171 15372321 + 13 NA Intergenic Intergenic -10619 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9572 chr3R 5127323 5127698 + 13 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -19982 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2595 chr2L 17079021 17079175 + 13 NA Intergenic Intergenic -6552 FBgn0264367 FBgn0264367 FBtr0332224 CR43819 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12114 chr3R 24302186 24302325 + 13 NA Intergenic Intergenic -8024 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11128 chr3R 16518591 16518669 + 13 NA exon (FBgn0024944, exon 7 of 7) protein_coding-exon (FBgn0024944, exon 7 of 7) 14725 FBgn0263406 FBgn0263406 FBtr0309185 CR43452 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1109 chr2L 8585984 8586342 + 13 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 8326 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1668 chr2L 12611942 12612014 + 13 NA promoter-TSS (FBgn0032439) protein_coding-promoter-TSS (FBgn0032439) -6370 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_234 chr2L 1390324 1390491 + 13 NA intron (FBgn0002543, intron 9 of 13) protein_coding-intron (FBgn0002543, intron 9 of 13) 22318 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9766 chr3R 6858268 6858372 + 13 NA exon (FBgn0083950, exon 10 of 16) protein_coding-exon (FBgn0083950, exon 10 of 16) 39115 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10822 chr3R 14472890 14473017 + 13 NA exon (FBgn0263974, exon 9 of 10) protein_coding-exon (FBgn0263974, exon 9 of 10) -5774 FBgn0038632 FBgn0038632 FBtr0290199 CG14301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12674 chr3R 27093343 27093540 + 13 NA intron (FBgn0039839, intron 7 of 8) protein_coding-intron (FBgn0039839, intron 7 of 8) 1989 FBgn0039839 FBgn0039839 FBtr0085764 CG15555 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13439 chrX 1385086 1385269 + 13 NA exon (FBgn0053513, exon 6 of 11) protein_coding-exon (FBgn0053513, exon 6 of 11) -8124 FBgn0003517 FBgn0003517 FBtr0070291 sta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_269 chr2L 1466399 1466460 + 13 NA Intergenic Intergenic 23703 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11748 chr3R 22780133 22780265 + 13 NA intron (FBgn0039464, intron 2 of 5) protein_coding-intron (FBgn0039464, intron 2 of 5) -1224 FBgn0039464 FBgn0039464 FBtr0085085 CG6330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3383 chr2L 21356227 21356485 + 13 NA exon (FBgn0032943, exon 3 of 4) protein_coding-exon (FBgn0032943, exon 3 of 4) -4860 FBgn0023090 FBgn0023090 FBtr0081516 dtr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2878 chr2L 18301003 18301219 + 13 NA Intergenic Intergenic 6207 FBgn0032677 FBgn0032677 FBtr0081050 CG5790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9030 chr3R 992779 992987 + 13 NA exon (FBgn0037295, exon 5 of 6) protein_coding-exon (FBgn0037295, exon 5 of 6) 1854 FBgn0037295 FBgn0037295 FBtr0110950 dpr16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9922 chr3R 8141606 8141687 + 13 NA Intergenic Intergenic 4571 FBgn0038011 FBgn0038011 FBtr0082566 CG4066 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1426 chr2L 10188632 10188821 + 13 NA exon (FBgn0028675, exon 15 of 24) protein_coding-exon (FBgn0028675, exon 15 of 24) 2770 FBgn0051874 FBgn0051874 FBtr0079964 CG31874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_292 chr2L 1532699 1532816 + 13 NA Intergenic Intergenic 10066 FBgn0026397 FBgn0026397 FBtr0077874 Or22b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1279 chr2L 8923257 8923360 + 13 NA exon (FBgn0085427, exon 3 of 11) protein_coding-exon (FBgn0085427, exon 3 of 11) -10755 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10463 chr3R 12233666 12233811 + 13 NA Intergenic Intergenic -4326 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10668 chr3R 13563861 13564137 + 13 NA promoter-TSS (FBgn0038541) protein_coding-promoter-TSS (FBgn0038541) 1666 FBgn0038541 FBgn0038541 FBtr0083512 TyrRII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_377 chr2L 2257248 2257364 + 13 NA Intergenic Intergenic -2256 FBgn0031406 FBgn0031406 FBtr0077804 Send1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8264 chr3L 16467943 16468006 + 13 NA intron (FBgn0004569, intron 1 of 3) protein_coding-intron (FBgn0053158, intron 3 of 5) 8776 FBgn0004569 FBgn0004569 FBtr0075408 aos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2658 chr2L 17319205 17319309 + 13 NA Intergenic Intergenic -7437 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6882 chr3L 1974546 1974729 + 13 NA TTS (FBgn0035300) protein_coding-TTS (FBgn0035300) 2999 FBgn0035300 FBgn0035300 FBtr0072845 CG1139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4192 chr2R 3732591 3732700 + 13 NA exon (FBgn0085390, exon 3 of 10) protein_coding-exon (FBgn0085390, exon 3 of 10) 12774 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3334 chr2L 21066762 21066886 + 13 NA intron (FBgn0032910, intron 1 of 7) protein_coding-intron (FBgn0032910, intron 1 of 7) 3457 FBgn0032910 FBgn0032910 FBtr0081507 CG9265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3036 chr2L 19479629 19479805 + 13 NA Intergenic Intergenic 4988 FBgn0032787 FBgn0032787 FBtr0302930 CG10195 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9552 chr3R 5100924 5101153 + 13 NA Intergenic Intergenic 8284 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11201 chr3R 17242911 17243037 + 13 NA intron (FBgn0008651, intron 1 of 3) protein_coding-intron (FBgn0008651, intron 1 of 2) 8129 FBgn0051438 FBgn0051438 FBtr0084090 CheB93b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7363 chr3L 8039823 8039912 + 13 NA exon (FBgn0011817, exon 6 of 10) protein_coding-exon (FBgn0011817, exon 6 of 10) 9608 FBgn0026263 FBgn0026263 FBtr0302329 bip1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7351 chr3L 7870131 7870257 + 13 NA intron (FBgn0052365, intron 2 of 4) protein_coding-intron (FBgn0052365, intron 2 of 4) 8050 FBgn0052365 FBgn0052365 FBtr0076746 CG32365 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1870 chr2L 14036186 14036367 + 13 NA Intergenic Intergenic -3894 FBgn0028875 FBgn0028875 FBtr0309867 nAcRalpha-34E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8454 chr3L 17969488 17969550 + 13 NA intron (FBgn0000568, intron 4 of 7) protein_coding-intron (FBgn0000568, intron 2 of 5) 26659 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_900 chr2L 6589926 6590095 + 13 NA intron (FBgn0031835, intron 1 of 15) protein_coding-intron (FBgn0031835, intron 1 of 15) 11056 FBgn0031835 FBgn0031835 FBtr0089641 CG11319 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8441 chr3L 17787955 17788300 + 13 NA exon (FBgn0261998, exon 4 of 11) protein_coding-exon (FBgn0261998, exon 4 of 11) 2567 FBgn0261998 FBgn0261998 FBtr0307890 CG42816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_214 chr2L 1346112 1346270 + 13 NA Intergenic Intergenic 1711 FBgn0026141 FBgn0026141 FBtr0305553 Cdlc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11193 chr3R 17209385 17209497 + 13 NA Intergenic Intergenic 4740 FBgn0004110 FBgn0004110 FBtr0084086 tin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12752 chr3R 27491279 27491337 + 13 NA TTS (FBgn0039862) protein_coding-TTS (FBgn0039862) -3879 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5961 chr2R 18228818 18229023 + 13 NA exon (FBgn0034720, exon 6 of 14) protein_coding-exon (FBgn0034720, exon 6 of 14) -6892 FBgn0034721 FBgn0034721 FBtr0071819 CG11298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7793 chr3L 12541941 12541995 + 13 NA intron (FBgn0036302, intron 3 of 9) protein_coding-intron (FBgn0036302, intron 3 of 12) 7158 FBgn0263587 FBgn0263587 FBtr0309822 CR43612 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5778 chr2R 16804646 16804781 + 13 NA exon (FBgn0020617, exon 1 of 6) protein_coding-exon (FBgn0020617, exon 1 of 6) 428 FBgn0020617 FBgn0020617 FBtr0071518 Rx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4776 chr2R 7962976 7963082 + 13 NA intron (FBgn0033679, intron 2 of 6) protein_coding-intron (FBgn0033679, intron 2 of 6) 4019 FBgn0033679 FBgn0033679 FBtr0088022 CG8888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1146 chr2L 8649427 8649631 + 13 NA intron (FBgn0011259, intron 6 of 20) protein_coding-intron (FBgn0011259, intron 6 of 21) -23623 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7824 chr3L 12689008 12689079 + 13 NA intron (FBgn0014343, intron 1 of 4) protein_coding-intron (FBgn0014343, intron 1 of 4) 2304 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9946 chr3R 8410125 8410240 + 13 NA intron (FBgn0038063, intron 1 of 6) protein_coding-intron (FBgn0038063, intron 1 of 6) -23294 FBgn0038063 FBgn0038063 FBtr0330120 Octbeta2R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7763 chr3L 12321817 12322123 + 13 NA promoter-TSS (FBgn0052105) protein_coding-promoter-TSS (FBgn0052105) -362 FBgn0052105 FBgn0052105 FBtr0333837 CG32105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4605 chr2R 6795062 6795122 + 13 NA Intergenic Intergenic -2336 FBgn0033573 FBgn0033573 FBtr0088200 Obp47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10292 chr3R 11231160 11231248 + 13 NA promoter-TSS (FBgn0038337) protein_coding-promoter-TSS (FBgn0038337) 23 FBgn0038337 FBgn0038337 FBtr0083106 CG6125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5469 chr2R 14114285 14114480 + 13 NA Intergenic Intergenic -5886 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_873 chr2L 6330220 6330543 + 13 NA exon (FBgn0021873, exon 6 of 8) protein_coding-exon (FBgn0021873, exon 6 of 8) 6614 FBgn0021873 FBgn0021873 FBtr0300039 Gef26 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6702 chr3L 221478 221723 + 13 NA promoter-TSS (FBgn0035113) protein_coding-promoter-TSS (FBgn0035113) -879 FBgn0035113 FBgn0035113 FBtr0072525 pyx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9149 chr3R 2092708 2092884 + 13 NA TTS (FBgn0037418) protein_coding-TTS (FBgn0037418) 1614 FBgn0037418 FBgn0037418 FBtr0078614 Osi11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3499 chr2L 21868606 21868666 + 13 NA Intergenic Intergenic -25591 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12037 chr3R 24027637 24027783 + 13 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 55108 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4818 chr2R 8308323 8308378 + 13 NA exon (FBgn0033733, exon 5 of 5) protein_coding-exon (FBgn0033733, exon 5 of 5) -1551 FBgn0261853 FBgn0261853 FBtr0303428 CG42782 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12480 chr3R 25787477 25787597 + 13 NA exon (FBgn0004622, exon 2 of 10) protein_coding-exon (FBgn0004622, exon 2 of 10) 7632 FBgn0004622 FBgn0004622 FBtr0330298 Takr99D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2786 chr2L 17926947 17927001 + 13 NA Intergenic Intergenic -7843 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8120 chr3L 15122698 15122864 + 13 NA exon (FBgn0036482, exon 2 of 3) protein_coding-exon (FBgn0036482, exon 2 of 3) 1697 FBgn0036482 FBgn0036482 FBtr0075654 CG13457 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6480 chr2RHet 1458892 1459147 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3159 chr2L 20130789 20130959 + 13 NA Intergenic Intergenic 4049 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13273 chrU 6560171 6560455 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1537 chr2L 11428627 11428728 + 13 NA Intergenic Intergenic 16926 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding Nup98-S2-pascual-garcia2017_R1_peak_376 chr2L 2204229 2204283 + 13 NA exon (FBgn0051668, exon 8 of 9) protein_coding-exon (FBgn0051668, exon 8 of 9) 1910 FBgn0051668 FBgn0051668 FBtr0307523 CG31668 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3407 chr2L 21557952 21558262 + 13 NA Intergenic Intergenic 15118 FBgn0051614 FBgn0051614 FBtr0085895 His-Psi:CR31614 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7984 chr3L 13912973 13913033 + 13 NA promoter-TSS (FBgn0026376) protein_coding-promoter-TSS (FBgn0026376) 62 FBgn0026376 FBgn0026376 FBtr0330186 Rgl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8265 chr3L 16470973 16471027 + 13 NA intron (FBgn0004569, intron 1 of 3) protein_coding-intron (FBgn0053158, intron 3 of 5) 5750 FBgn0004569 FBgn0004569 FBtr0075408 aos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6093 chr2R 19365831 19365935 + 13 NA promoter-TSS (FBgn0264337) ncRNA-promoter-TSS (FBgn0264337) -883 FBgn0264337 FBgn0264337 FBtr0331988 CR43793 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7295 chr3L 7266226 7266283 + 13 NA exon (FBgn0035756, exon 9 of 13) protein_coding-exon (FBgn0035756, exon 9 of 13) -9234 FBgn0035755 FBgn0035755 FBtr0309299 CG14830 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7029 chr3L 4191724 4191788 + 13 NA exon (FBgn0003710, exon 2 of 3) protein_coding-exon (FBgn0003710, exon 2 of 3) -2812 FBgn0263110 FBgn0263110 FBtr0307312 CG43367 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2339 chr2L 15833520 15833611 + 13 NA Intergenic Intergenic 2093 FBgn0028900 FBgn0028900 FBtr0080814 CG18518 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11644 chr3R 22321770 22322152 + 13 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 30166 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4255 chr2R 4223786 4223921 + 13 NA intron (FBgn0261588, intron 1 of 10) protein_coding-intron (FBgn0261588, intron 1 of 10) 8848 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3320 chr2L 20989385 20989467 + 13 NA intron (FBgn0250867, intron 5 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -20459 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5715 chr2R 16176167 16176270 + 13 NA promoter-TSS (FBgn0026136) protein_coding-promoter-TSS (FBgn0026136) -914 FBgn0026136 FBgn0026136 FBtr0086278 CkIIbeta2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6966 chr3L 2955581 2955635 + 13 NA exon (FBgn0262593, exon 9 of 13) protein_coding-exon (FBgn0262593, exon 9 of 13) -3990 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1319 chr2L 9100913 9101050 + 13 NA Intergenic Intergenic 3354 FBgn0051609 FBgn0051609 FBtr0299873 CG31609 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9234 chr3R 2622380 2622514 + 13 NA intron (FBgn0000439, intron 3 of 4) protein_coding-intron (FBgn0000439, intron 3 of 4) 4889 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11375 chr3R 19298161 19298313 + 13 NA Intergenic Intergenic -9350 FBgn0051225 FBgn0051225 FBtr0290293 Ir94f protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10909 chr3R 15237285 15237505 + 13 NA TTS (FBgn0038705) protein_coding-TTS (FBgn0038705) -1021 FBgn0051221 FBgn0051221 FBtr0330030 CG31221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8534 chr3L 18916893 18917083 + 13 NA exon (FBgn0052204, exon 8 of 8) protein_coding-exon (FBgn0052204, exon 8 of 8) -1203 FBgn0262351 FBgn0262351 FBtr0304635 CG43049 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11913 chr3R 23497955 23498105 + 13 NA exon (FBgn0039536, exon 23 of 29) protein_coding-exon (FBgn0039536, exon 23 of 29) -5267 FBgn0039537 FBgn0039537 FBtr0085215 CG5590 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4447 chr2R 5511886 5511964 + 13 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) 3114 FBgn0262172 FBgn0262172 FBtr0304173 mir-307b pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1085 chr2L 8500679 8500779 + 13 NA intron (FBgn0032048, intron 2 of 3) protein_coding-intron (FBgn0032048, intron 2 of 4) -4422 FBgn0032049 FBgn0032049 FBtr0079701 Bace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2199 chr2L 15217822 15217990 + 13 NA Intergenic Intergenic 2684 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11825 chr3R 23190418 23190580 + 13 NA intron (FBgn0260487, intron 4 of 6) protein_coding-intron (FBgn0260487, intron 4 of 6) 5088 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13228 chrU 2646995 2647187 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5189 chr2R 11468594 11468916 + 13 NA Intergenic Intergenic -7259 FBgn0034033 FBgn0034033 FBtr0087349 CG8204 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7786 chr3L 12463844 12463908 + 13 NA promoter-TSS (FBgn0036286) protein_coding-promoter-TSS (FBgn0036286) -948 FBgn0036286 FBgn0036286 FBtr0308896 CG10616 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2517 chr2L 16760076 16760296 + 13 NA promoter-TSS (FBgn0032602) protein_coding-promoter-TSS (FBgn0032602) -48 FBgn0032602 FBgn0032602 FBtr0080933 CG13278 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3537 chr2L 21960785 21960941 + 13 NA Intergenic Intergenic 32070 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13738 chrX 14064466 14064540 + 13 NA exon (FBgn0030537, exon 1 of 1) protein_coding-exon (FBgn0030537, exon 1 of 1) 875 FBgn0030537 FBgn0030537 FBtr0073868 CG12480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4121 chr2R 3185490 3185549 + 13 NA exon (FBgn0003174, exon 3 of 9) protein_coding-exon (FBgn0003174, exon 3 of 9) -13394 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_531 chr2L 3627145 3627322 + 13 NA exon (FBgn0000721, exon 2 of 7) protein_coding-exon (FBgn0000721, exon 2 of 7) 4904 FBgn0000721 FBgn0000721 FBtr0100363 for protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11286 chr3R 17984654 17984773 + 13 NA intron (FBgn0051163, intron 3 of 18) protein_coding-intron (FBgn0051163, intron 3 of 18) 25156 FBgn0051163 FBgn0051163 FBtr0310203 SKIP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4079 chr2R 2723397 2723617 + 13 NA promoter-TSS (FBgn0263517) pre_miRNA-promoter-TSS (FBgn0263517) -430 FBgn0263517 FBgn0263517 FBtr0309584 mir-4976 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_861 chr2L 6202478 6202626 + 13 NA intron (FBgn0085409, intron 6 of 12) protein_coding-intron (FBgn0085409, intron 6 of 12) -22498 FBgn0026755 FBgn0026755 FBtr0079242 Ugt37b1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8817 chr3L 24116145 24116269 + 13 NA intron (FBgn0011288, intron 2 of 6) protein_coding-intron (FBgn0011288, intron 2 of 7) 48878 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12505 chr3R 25999397 25999603 + 13 NA exon (FBgn0002773, exon 2 of 4) protein_coding-exon (FBgn0002773, exon 2 of 4) 773 FBgn0002773 FBgn0002773 FBtr0089747 Mlc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7671 chr3L 11647128 11647204 + 13 NA exon (FBgn0052085, exon 5 of 6) protein_coding-exon (FBgn0052085, exon 5 of 6) -2870 FBgn0262437 FBgn0262437 FBtr0304421 mir-274 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_12933 chr4 546098 546216 + 13 NA exon (FBgn0004607, exon 6 of 14) protein_coding-exon (FBgn0004607, exon 6 of 14) 23721 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2233 chr2L 15388902 15388970 + 13 NA Intergenic Intergenic -27309 FBgn0032563 FBgn0032563 FBtr0080743 CG15258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4929 chr2R 9268603 9268682 + 13 NA Intergenic Intergenic -3423 FBgn0033830 FBgn0033830 FBtr0087720 CG10814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3642 chr2L 22193821 22193933 + 13 NA intron (FBgn0259683, intron 5 of 6) protein_coding-intron (FBgn0259683, intron 5 of 6) 18462 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6068 chr2R 19195632 19195895 + 13 NA TTS (FBgn0034842) protein_coding-TTS (FBgn0034842) 1576 FBgn0034842 FBgn0034842 FBtr0072045 Prosbeta5R protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13773 chrX 16572415 16572521 + 13 NA promoter-TSS (FBgn0261245) protein_coding-promoter-TSS (FBgn0261245) 510 FBgn0030770 FBgn0030770 FBtr0074373 CG13010 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6784 chr3L 1093106 1093286 + 13 NA intron (FBgn0004870, intron 1 of 1) protein_coding-intron (FBgn0004870, intron 1 of 3) 7893 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2271 chr2L 15493045 15493237 + 13 NA Intergenic Intergenic -5969 FBgn0002524 FBgn0002524 FBtr0080738 lace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3696 chr2L 22342179 22342409 + 13 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) 1672 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_2984 chr2L 19222474 19222780 + 13 NA Intergenic Intergenic 32281 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9601 chr3R 5300838 5300965 + 13 NA exon (FBgn0037698, exon 5 of 12) protein_coding-exon (FBgn0037698, exon 5 of 12) -16003 FBgn0037697 FBgn0037697 FBtr0082042 CG9363 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4374 chr2R 4945238 4945403 + 13 NA intron (FBgn0033368, intron 2 of 10) protein_coding-intron (FBgn0033368, intron 2 of 10) 2090 FBgn0033368 FBgn0033368 FBtr0308823 CG13743 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9061 chr3R 1328003 1328239 + 13 NA exon (FBgn0051547, exon 1 of 10) protein_coding-exon (FBgn0051547, exon 1 of 10) -3385 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8660 chr3L 21753417 21753585 + 13 NA exon (FBgn0037130, exon 3 of 8) protein_coding-exon (FBgn0037130, exon 3 of 8) 3244 FBgn0037131 FBgn0037131 FBtr0078435 CG14564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12799 chr3R 27751702 27751819 + 13 NA intron (FBgn0011224, intron 3 of 13) protein_coding-intron (FBgn0011224, intron 4 of 13) 55131 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4935 chr2R 9288752 9288859 + 13 NA Intergenic Intergenic -1932 FBgn0033834 FBgn0033834 FBtr0087717 CG4744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2203 chr2L 15232289 15232343 + 13 NA intron (FBgn0028516, intron 4 of 6) protein_coding-intron (FBgn0028516, intron 6 of 8) 13602 FBgn0028516 FBgn0028516 FBtr0080715 ZnT35C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4126 chr2R 3200343 3200489 + 13 NA exon (FBgn0033158, exon 4 of 4) protein_coding-exon (FBgn0033158, exon 4 of 4) 1503 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13566 chrX 5906482 5906587 + 13 NA exon (FBgn0029003, exon 1 of 2) protein_coding-exon (FBgn0029003, exon 1 of 2) 677 FBgn0029003 FBgn0029003 FBtr0070890 mab-21 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11026 chr3R 15903310 15903420 + 13 NA Intergenic Intergenic 4807 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13138 chrU 1045329 1045436 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6054 chr2R 19007411 19007499 + 13 NA Intergenic Intergenic 6110 FBgn0034824 FBgn0034824 FBtr0071975 Klp59C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8791 chr3L 23847299 23847413 + 13 NA intron (FBgn0058470, intron 12 of 12) protein_coding-intron (FBgn0058470, intron 12 of 12) 28886 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2627 chr2L 17197809 17197986 + 13 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) 15959 FBgn0046888 FBgn0046888 FBtr0080965 Gr36d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7901 chr3L 13363666 13363805 + 13 NA Intergenic Intergenic -7352 FBgn0036350 FBgn0036350 FBtr0331787 CG14111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12122 chr3R 24331025 24331114 + 13 NA intron (FBgn0013813, intron 27 of 45) protein_coding-intron (FBgn0013813, intron 28 of 46) 15168 FBgn0051051 FBgn0051051 FBtr0085296 CG31051 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_485 chr2L 3281383 3281437 + 13 NA promoter-TSS (FBgn0031514) protein_coding-promoter-TSS (FBgn0031514) -1953 FBgn0031514 FBgn0031514 FBtr0077609 CG3332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6250 chr2R 20741641 20741781 + 13 NA Intergenic Intergenic 5212 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_442 chr2L 2820974 2821028 + 13 NA exon (FBgn0031464, exon 4 of 10) protein_coding-exon (FBgn0031464, exon 4 of 10) 4505 FBgn0031465 FBgn0031465 FBtr0077723 CG3123 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3083 chr2L 19717322 19717438 + 13 NA exon (FBgn0000464, exon 11 of 17) protein_coding-exon (FBgn0000464, exon 11 of 17) -16412 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11811 chr3R 23155603 23155697 + 13 NA exon (FBgn0039511, exon 1 of 1) protein_coding-exon (FBgn0039511, exon 1 of 1) 954 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_428 chr2L 2703898 2703952 + 13 NA intron (FBgn0051690, intron 2 of 7) protein_coding-intron (FBgn0051690, intron 3 of 8) -7488 FBgn0031446 FBgn0031446 FBtr0300986 CG15398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4486 chr2R 5805554 5805707 + 13 NA exon (FBgn0011656, exon 9 of 11) protein_coding-exon (FBgn0011656, exon 9 of 11) 7232 FBgn0033465 FBgn0033465 FBtr0308338 CG12140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6545 chr2RHet 1918202 1918367 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5622 chr2R 15531352 15531539 + 13 NA TTS (FBgn0034461) protein_coding-TTS (FBgn0034461) 993 FBgn0034461 FBgn0034461 FBtr0086470 CG15124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2177 chr2L 15151997 15152074 + 13 NA Intergenic Intergenic -19646 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_808 chr2L 5735191 5735467 + 13 NA exon (FBgn0031734, exon 7 of 11) protein_coding-exon (FBgn0031734, exon 7 of 11) 5625 FBgn0031734 FBgn0031734 FBtr0079166 CG11147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9368 chr3R 3516495 3516562 + 13 NA exon (FBgn0051146, exon 10 of 12) protein_coding-exon (FBgn0051146, exon 10 of 12) -31611 FBgn0037512 FBgn0037512 FBtr0081738 CG2616 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7426 chr3L 8642921 8643142 + 13 NA promoter-TSS (FBgn0000121) protein_coding-promoter-TSS (FBgn0000121) 460 FBgn0035922 FBgn0035922 FBtr0273328 Pex7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7664 chr3L 11503153 11503238 + 13 NA promoter-TSS (FBgn0003378) protein_coding-promoter-TSS (FBgn0003378) 234 FBgn0003377 FBgn0003377 FBtr0076095 Sgs7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_333 chr2L 1821288 1821342 + 13 NA TTS (FBgn0051933) protein_coding-TTS (FBgn0051933) 2016 FBgn0051933 FBgn0051933 FBtr0077896 CG31933 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10808 chr3R 14422706 14422997 + 13 NA exon (FBgn0038629, exon 4 of 9) protein_coding-exon (FBgn0038629, exon 4 of 9) -1627 FBgn0038630 FBgn0038630 FBtr0083636 CG14305 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1308 chr2L 9055309 9055386 + 13 NA exon (FBgn0051708, exon 7 of 10) protein_coding-exon (FBgn0051708, exon 7 of 10) 15815 FBgn0051708 FBgn0051708 FBtr0303881 CG31708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1748 chr2L 12946596 12946693 + 13 NA Intergenic Intergenic -20105 FBgn0032462 FBgn0032462 FBtr0273445 CG16800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8183 chr3L 15904355 15904466 + 13 NA exon (FBgn0036544, exon 2 of 16) protein_coding-exon (FBgn0036544, exon 2 of 16) -12281 FBgn0036542 FBgn0036542 FBtr0100034 pHCl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11100 chr3R 16301597 16301702 + 13 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 2 of 17) 8624 FBgn0262869 FBgn0262869 FBtr0306205 mun protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9805 chr3R 7157193 7157399 + 13 NA intron (FBgn0004595, intron 1 of 6) protein_coding-intron (FBgn0004595, intron 1 of 6) -1604 FBgn0004595 FBgn0004595 FBtr0304607 pros protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7914 chr3L 13431176 13431379 + 13 NA exon (FBgn0036362, exon 2 of 4) protein_coding-exon (FBgn0036362, exon 2 of 4) 223 FBgn0036362 FBgn0036362 FBtr0089323 CG10725 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6349 chr2RHet 480310 480418 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8588 chr3L 20151537 20151623 + 13 NA exon (FBgn0261556, exon 5 of 15) protein_coding-exon (FBgn0261556, exon 5 of 15) -17873 FBgn0036942 FBgn0036942 FBtr0074864 CG7328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1915 chr2L 14294531 14294647 + 13 NA exon (FBgn0263649, exon 2 of 2) ncRNA-exon (FBgn0263649, exon 2 of 2) 805 FBgn0263649 FBgn0263649 FBtr0310013 CR43640 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4772 chr2R 7942494 7942636 + 13 NA promoter-TSS (FBgn0028407) protein_coding-promoter-TSS (FBgn0028407) -28 FBgn0028407 FBgn0028407 FBtr0087980 Drep-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3321 chr2L 20993721 20993806 + 13 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -24796 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8777 chr3L 23761882 23762026 + 13 NA Intergenic Intergenic -15377 FBgn0264699 FBgn0264699 FBtr0333915 CG43968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9625 chr3R 5687302 5687356 + 13 NA intron (FBgn0037766, intron 2 of 2) protein_coding-intron (FBgn0037766, intron 2 of 2) 6513 FBgn0037766 FBgn0037766 FBtr0330082 Teh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3254 chr2L 20588570 20588783 + 13 NA Intergenic Intergenic 15520 FBgn0051677 FBgn0051677 FBtr0081407 CG31677 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1707 chr2L 12775688 12775765 + 13 NA Intergenic Intergenic -13886 FBgn0032457 FBgn0032457 FBtr0080402 CG15483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7157 chr3L 6130847 6131014 + 13 NA exon (FBgn0020640, exon 2 of 2) protein_coding-exon (FBgn0020640, exon 2 of 2) 288 FBgn0020640 FBgn0020640 FBtr0077056 Lcp65Ae protein_coding Nup98-S2-pascual-garcia2017_R1_peak_826 chr2L 5853331 5853412 + 13 NA intron (FBgn0085410, intron 8 of 9) protein_coding-intron (FBgn0085410, intron 8 of 9) 26110 FBgn0031745 FBgn0031745 FBtr0079158 CG8965 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8909 chr3LHet 1624992 1625131 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12495 chr3R 25944355 25944556 + 13 NA intron (FBgn0015542, intron 11 of 11) protein_coding-intron (FBgn0015542, intron 11 of 11) 4530 FBgn0040625 FBgn0040625 FBtr0302312 CG18682 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10983 chr3R 15646551 15646763 + 13 NA intron (FBgn0014135, intron 2 of 4) protein_coding-intron (FBgn0014135, intron 2 of 4) 15882 FBgn0014135 FBgn0014135 FBtr0300123 bnl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6497 chr2RHet 1714708 1714854 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6819 chr3L 1288139 1288233 + 13 NA exon (FBgn0052333, exon 4 of 9) protein_coding-exon (FBgn0052333, exon 4 of 9) -7727 FBgn0262937 FBgn0262937 FBtr0072663 Rabex-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12819 chr3R 27869705 27869759 + 13 NA Intergenic Intergenic 5637 FBgn0039887 FBgn0039887 FBtr0085873 CG2053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12531 chr3R 26349311 26349392 + 13 NA intron (FBgn0027654, intron 2 of 3) protein_coding-intron (FBgn0027654, intron 2 of 4) 3410 FBgn0027654 FBgn0027654 FBtr0085683 jdp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6487 chr2RHet 1649642 1649696 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1637 chr2L 12351979 12352128 + 13 NA exon (FBgn0262475, exon 2 of 10) protein_coding-exon (FBgn0262475, exon 2 of 10) 3936 FBgn0262475 FBgn0262475 FBtr0304864 bru-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7802 chr3L 12588527 12588705 + 13 NA exon (FBgn0015904, exon 5 of 5) protein_coding-exon (FBgn0015904, exon 5 of 5) -14115 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11092 chr3R 16252580 16252714 + 13 NA intron (FBgn0262869, intron 3 of 20) protein_coding-intron (FBgn0262869, intron 2 of 19) 18660 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1082 chr2L 8494590 8494776 + 13 NA TTS (FBgn0032049) protein_coding-TTS (FBgn0032049) 1624 FBgn0032049 FBgn0032049 FBtr0079701 Bace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4029 chr2R 1942145 1942216 + 13 NA intron (FBgn0033058, intron 1 of 6) protein_coding-intron (FBgn0033058, intron 1 of 7) 3703 FBgn0033058 FBgn0033058 FBtr0301687 CCHa2r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8965 chr3R 510660 510738 + 13 NA intron (FBgn0263346, intron 4 of 14) protein_coding-intron (FBgn0263346, intron 4 of 8) 5631 FBgn0053927 FBgn0053927 FBtr0091931 CG33927 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2294 chr2L 15566872 15566952 + 13 NA intron (FBgn0028370, intron 2 of 3) protein_coding-intron (FBgn0028370, intron 2 of 3) 14189 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4685 chr2R 7424423 7424477 + 13 NA Intergenic Intergenic -9062 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12570 chr3R 26705910 26706004 + 13 NA intron (FBgn0039808, intron 1 of 5) protein_coding-intron (FBgn0039808, intron 1 of 5) 640 FBgn0039808 FBgn0039808 FBtr0310620 CG12071 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5657 chr2R 15822267 15822456 + 13 NA Intergenic Intergenic 5688 FBgn0263340 FBgn0263340 FBtr0308772 CR43421 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12640 chr3R 26971147 26971341 + 13 NA intron (FBgn0013973, intron 3 of 16) protein_coding-intron (FBgn0013973, intron 3 of 16) 11130 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8995 chr3R 762426 762662 + 13 NA exon (FBgn0085335, exon 2 of 2) protein_coding-exon (FBgn0085335, exon 2 of 2) 9901 FBgn0085335 FBgn0085335 FBtr0112502 CG34306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10214 chr3R 10441712 10441883 + 13 NA exon (FBgn0038246, exon 3 of 7) protein_coding-exon (FBgn0038246, exon 3 of 7) 6433 FBgn0038246 FBgn0038246 FBtr0082961 CG14853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4161 chr2R 3319792 3319927 + 13 NA intron (FBgn0003460, intron 6 of 6) protein_coding-intron (FBgn0003460, intron 6 of 6) -3761 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8170 chr3L 15768551 15768605 + 13 NA Intergenic Intergenic -32844 FBgn0036531 FBgn0036531 FBtr0075502 CG6244 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9502 chr3R 4514044 4514169 + 13 NA Intergenic Intergenic 6216 FBgn0001180 FBgn0001180 FBtr0081951 hb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10344 chr3R 11533064 11533190 + 13 NA exon (FBgn0038354, exon 5 of 5) protein_coding-exon (FBgn0038354, exon 5 of 5) 2710 FBgn0038354 FBgn0038354 FBtr0083165 CG5404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11190 chr3R 17165285 17165504 + 13 NA intron (FBgn0038881, intron 2 of 14) protein_coding-intron (FBgn0038881, intron 2 of 14) 9912 FBgn0038881 FBgn0038881 FBtr0084095 CG16791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2719 chr2L 17656492 17656624 + 13 NA intron (FBgn0015609, intron 19 of 22) protein_coding-intron (FBgn0015609, intron 18 of 21) 28699 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9701 chr3R 6389337 6389405 + 13 NA intron (FBgn0001235, intron 5 of 12) protein_coding-intron (FBgn0001235, intron 5 of 11) 42021 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2789 chr2L 17933985 17934101 + 13 NA Intergenic Intergenic -14912 FBgn0262963 FBgn0262963 FBtr0306710 CR43274 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5853 chr2R 17447192 17447274 + 13 NA TTS (FBgn0003731) protein_coding-TTS (FBgn0003731) 12159 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3568 chr2L 22012329 22012495 + 13 NA Intergenic Intergenic -2819 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10260 chr3R 10894353 10894462 + 13 NA intron (FBgn0038282, intron 3 of 7) protein_coding-intron (FBgn0038282, intron 3 of 7) 8520 FBgn0038282 FBgn0038282 FBtr0089376 dpr9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_153 chr2L 1032070 1032273 + 13 NA intron (FBgn0031294, intron 2 of 10) protein_coding-intron (FBgn0031294, intron 2 of 10) 2411 FBgn0031294 FBgn0031294 FBtr0332270 IA-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5518 chr2R 14540427 14540575 + 13 NA promoter-TSS (FBgn0034371) protein_coding-promoter-TSS (FBgn0034371) -222 FBgn0034371 FBgn0034371 FBtr0086658 SP2637 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9888 chr3R 7949642 7949766 + 13 NA intron (FBgn0037992, intron 2 of 6) protein_coding-intron (FBgn0037992, intron 1 of 4) 4215 FBgn0037992 FBgn0037992 FBtr0308294 CG4702 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11897 chr3R 23472912 23472999 + 13 NA TTS (FBgn0051058) protein_coding-TTS (FBgn0051058) 3479 FBgn0051058 FBgn0051058 FBtr0085198 CG31058 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5826 chr2R 17241970 17242200 + 13 NA TTS (FBgn0000395) protein_coding-TTS (FBgn0000395) -3736 FBgn0034624 FBgn0034624 FBtr0071611 CG17974 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1850 chr2L 13923574 13923720 + 13 NA promoter-TSS (FBgn0028938) protein_coding-promoter-TSS (FBgn0028938) -98 FBgn0028938 FBgn0028938 FBtr0302990 CG16886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2422 chr2L 16118306 16118416 + 13 NA Intergenic Intergenic -15147 FBgn0028884 FBgn0028884 FBtr0080816 CG4892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11447 chr3R 20834580 20834648 + 13 NA intron (FBgn0039257, intron 3 of 7) protein_coding-intron (FBgn0039257, intron 2 of 6) -14381 FBgn0039258 FBgn0039258 FBtr0084755 beta4GalT7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4177 chr2R 3444471 3444648 + 13 NA exon (FBgn0033192, exon 4 of 14) protein_coding-exon (FBgn0033192, exon 4 of 14) 8775 FBgn0050499 FBgn0050499 FBtr0310025 CG30499 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10191 chr3R 10231757 10231865 + 13 NA promoter-TSS (FBgn0086901) protein_coding-promoter-TSS (FBgn0086901) -9646 FBgn0262327 FBgn0262327 FBtr0304502 mir-2281 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_5398 chr2R 13498854 13498985 + 13 NA exon (FBgn0034253, exon 4 of 9) protein_coding-exon (FBgn0034253, exon 4 of 9) -5342 FBgn0082922 FBgn0082922 FBtr0113512 snoRNA:Or-aca4 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3485 chr2L 21840432 21840570 + 13 NA Intergenic Intergenic 11908 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11906 chr3R 23481970 23482109 + 13 NA exon (FBgn0051057, exon 1 of 7) protein_coding-exon (FBgn0051057, exon 1 of 7) 478 FBgn0051057 FBgn0051057 FBtr0331369 tau protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2604 chr2L 17096504 17096847 + 13 NA Intergenic Intergenic 9034 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2279 chr2L 15522302 15522530 + 13 NA promoter-TSS (FBgn0264261) ncRNA-promoter-TSS (FBgn0264261) -22 FBgn0264261 FBgn0264261 FBtr0331273 CR43761 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13209 chrU 2326859 2327133 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10429 chr3R 11959343 11959582 + 13 NA intron (FBgn0003319, intron 2 of 10) protein_coding-intron (FBgn0003319, intron 2 of 10) 5011 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5557 chr2R 14903864 14903975 + 13 NA Intergenic Intergenic -13595 FBgn0263083 FBgn0263083 FBtr0307099 CG43351 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13050 chrU 45860 46003 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6138 chr2R 19688805 19688865 + 13 NA promoter-TSS (FBgn0050177) protein_coding-promoter-TSS (FBgn0050177) -230 FBgn0050177 FBgn0050177 FBtr0072122 CG30177 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12696 chr3R 27187872 27188042 + 13 NA exon (FBgn0085376, exon 15 of 17) protein_coding-exon (FBgn0085376, exon 15 of 17) -10192 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3737 chr2L 22510094 22510216 + 13 NA Intergenic Intergenic 37673 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10054 chr3R 9156369 9156589 + 13 NA exon (FBgn0038139, exon 5 of 8) protein_coding-exon (FBgn0038139, exon 5 of 8) 3406 FBgn0038139 FBgn0038139 FBtr0100149 CG8795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8676 chr3L 22092458 22092541 + 13 NA Intergenic Intergenic 16679 FBgn0004414 FBgn0004414 FBtr0078482 msopa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4371 chr2R 4940660 4940775 + 13 NA intron (FBgn0033368, intron 2 of 9) protein_coding-intron (FBgn0033368, intron 3 of 10) 6693 FBgn0033368 FBgn0033368 FBtr0308823 CG13743 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3749 chr2L 22554280 22554820 + 13 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 82068 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8862 chr3LHet 831414 831468 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_180 chr2L 1215881 1215935 + 13 NA TTS (FBgn0262944) ncRNA-TTS (FBgn0262944) 1877 FBgn0262944 FBgn0262944 FBtr0306546 CR43263 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12225 chr3R 24734177 24734310 + 13 NA exon (FBgn0259220, exon 3 of 12) protein_coding-exon (FBgn0259220, exon 3 of 12) -4366 FBgn0259220 FBgn0259220 FBtr0308600 Doa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3951 chr2R 834629 834729 + 13 NA Intergenic Intergenic -2493 FBgn0040849 FBgn0040849 FBtr0299925 Ir41a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11618 chr3R 22197376 22197447 + 13 NA Intergenic Intergenic 16201 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12515 chr3R 26186941 26187279 + 13 NA exon (FBgn0010113, exon 6 of 6) protein_coding-exon (FBgn0010113, exon 6 of 6) 26231 FBgn0015222 FBgn0015222 FBtr0332170 Fer1HCH protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5162 chr2R 11190578 11190762 + 13 NA Intergenic Intergenic -4836 FBgn0034007 FBgn0034007 FBtr0087394 CG8102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3025 chr2L 19371063 19371265 + 13 NA exon (FBgn0032771, exon 3 of 4) protein_coding-exon (FBgn0032771, exon 3 of 4) 686 FBgn0032771 FBgn0032771 FBtr0081198 CG17349 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12400 chr3R 25515498 25515602 + 13 NA promoter-TSS (FBgn0039682) protein_coding-promoter-TSS (FBgn0039682) -517 FBgn0039682 FBgn0039682 FBtr0085463 Obp99c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2494 chr2L 16579225 16579424 + 13 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -26621 FBgn0051815 FBgn0051815 FBtr0080870 CG31815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3287 chr2L 20721000 20721260 + 13 NA Intergenic Intergenic 5421 FBgn0032878 FBgn0032878 FBtr0081396 CG9316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9441 chr3R 4081130 4081208 + 13 NA intron (FBgn0260386, intron 3 of 8) protein_coding-intron (FBgn0260386, intron 3 of 8) 4949 FBgn0260386 FBgn0260386 FBtr0310081 mtg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6139 chr2R 19717500 19717708 + 13 NA exon (FBgn0034911, exon 2 of 9) protein_coding-exon (FBgn0034911, exon 2 of 9) -5213 FBgn0034910 FBgn0034910 FBtr0072238 CG4763 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3556 chr2L 21992398 21992618 + 13 NA exon (FBgn0032969, exon 1 of 2) protein_coding-exon (FBgn0032969, exon 1 of 2) 425 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10435 chr3R 11991499 11991558 + 13 NA intron (FBgn0063649, intron 2 of 7) protein_coding-intron (FBgn0063649, intron 2 of 7) 3348 FBgn0263449 FBgn0263449 FBtr0309304 CR43472 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5994 chr2R 18599846 18600065 + 13 NA promoter-TSS (FBgn0050268) protein_coding-promoter-TSS (FBgn0050268) -251 FBgn0050268 FBgn0050268 FBtr0273311 CG30268 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_825 chr2L 5846893 5847190 + 13 NA intron (FBgn0085410, intron 2 of 9) protein_coding-intron (FBgn0085410, intron 2 of 9) 22247 FBgn0085410 FBgn0085410 FBtr0330222 TrissinR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13180 chrU 1597679 1597850 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9966 chr3R 8574003 8574103 + 13 NA intron (FBgn0038084, intron 3 of 5) protein_coding-intron (FBgn0038084, intron 3 of 5) -4651 FBgn0038083 FBgn0038083 FBtr0302379 CG5999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7092 chr3L 5390838 5390892 + 13 NA Intergenic Intergenic -14944 FBgn0035604 FBgn0035604 FBtr0077153 Ir64a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3173 chr2L 20245215 20245269 + 13 NA Intergenic Intergenic -2981 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10251 chr3R 10822027 10822089 + 13 NA Intergenic Intergenic -18434 FBgn0038280 FBgn0038280 FBtr0083023 CG14861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4448 chr2R 5541303 5541517 + 13 NA intron (FBgn0033438, intron 3 of 7) protein_coding-intron (FBgn0033438, intron 3 of 7) -7320 FBgn0011921 FBgn0011921 FBtr0088465 tRNA:M3:46A tRNA Nup98-S2-pascual-garcia2017_R1_peak_3987 chr2R 1209154 1209233 + 13 NA intron (FBgn0261403, intron 5 of 8) protein_coding-intron (FBgn0261403, intron 6 of 9) 14381 FBgn0261403 FBgn0261403 FBtr0086086 sxc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1504 chr2L 11174117 11174425 + 13 NA intron (FBgn0259822, intron 3 of 11) protein_coding-intron (FBgn0259822, intron 3 of 11) -2606 FBgn0014076 FBgn0014076 FBtr0080216 Vm32E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13051 chrU 53388 53528 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2976 chr2L 19190201 19190322 + 13 NA promoter-TSS (FBgn0015380) protein_coding-promoter-TSS (FBgn0015380) -85 FBgn0015380 FBgn0015380 FBtr0330209 drl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9558 chr3R 5112417 5112611 + 13 NA Intergenic Intergenic 19760 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1597 chr2L 11945906 11946004 + 13 NA exon (FBgn0005664, exon 2 of 2) protein_coding-exon (FBgn0005664, exon 2 of 2) 1814 FBgn0005664 FBgn0005664 FBtr0080281 Cry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11137 chr3R 16572665 16573298 + 13 NA TTS (FBgn0017557) protein_coding-TTS (FBgn0017557) 1815 FBgn0017557 FBgn0017557 FBtr0083928 Pros28.1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6001 chr2R 18653161 18653327 + 13 NA TTS (FBgn0034776) protein_coding-TTS (FBgn0034776) 2005 FBgn0034776 FBgn0034776 FBtr0071880 CG13527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6273 chr2R 20974223 20974418 + 13 NA exon (FBgn0003715, exon 4 of 4) protein_coding-exon (FBgn0003715, exon 4 of 4) -2477 FBgn0004919 FBgn0004919 FBtr0306330 gol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4528 chr2R 6212801 6212952 + 13 NA exon (FBgn0261698, exon 27 of 29) protein_coding-exon (FBgn0261698, exon 27 of 29) -4871 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_690 chr2L 4759420 4759716 + 13 NA intron (FBgn0031627, intron 1 of 6) protein_coding-intron (FBgn0031627, intron 1 of 6) -3369 FBgn0260428 FBgn0260428 FBtr0300851 CG42523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9538 chr3R 4902360 4902513 + 13 NA intron (FBgn0003165, intron 3 of 5) protein_coding-intron (FBgn0003165, intron 10 of 12) 11531 FBgn0037661 FBgn0037661 FBtr0081971 Ada protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10696 chr3R 13720243 13720393 + 13 NA exon (FBgn0053547, exon 9 of 27) protein_coding-exon (FBgn0053547, exon 9 of 27) -11868 FBgn0038558 FBgn0038558 FBtr0308497 CG12347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6820 chr3L 1289360 1289438 + 13 NA intron (FBgn0052333, intron 4 of 8) protein_coding-intron (FBgn0052333, intron 4 of 8) -6514 FBgn0262937 FBgn0262937 FBtr0072663 Rabex-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10326 chr3R 11412964 11413166 + 13 NA Intergenic Intergenic -34571 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4240 chr2R 4096109 4096259 + 13 NA intron (FBgn0053087, intron 2 of 21) protein_coding-intron (FBgn0053087, intron 3 of 22) -2973 FBgn0033275 FBgn0033275 FBtr0088804 CG14756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10114 chr3R 9603178 9603340 + 13 NA exon (FBgn0038181, exon 13 of 14) protein_coding-exon (FBgn0038181, exon 13 of 14) -2087 FBgn0260464 FBgn0260464 FBtr0082829 CG9288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3678 chr2L 22290438 22290650 + 13 NA Intergenic Intergenic 40666 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4530 chr2R 6215877 6216027 + 13 NA intron (FBgn0261698, intron 23 of 27) protein_coding-intron (FBgn0261698, intron 23 of 27) -7947 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3490 chr2L 21854046 21854243 + 13 NA Intergenic Intergenic 25551 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13219 chrU 2421852 2422046 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8006 chr3L 14106481 14106676 + 13 NA exon (FBgn0042630, exon 7 of 7) protein_coding-exon (FBgn0042630, exon 7 of 7) -5360 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2950 chr2L 19015495 19015613 + 13 NA Intergenic Intergenic 4638 FBgn0028569 FBgn0028569 FBtr0081139 robl37BC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2996 chr2L 19271918 19272065 + 13 NA Intergenic Intergenic -9098 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3599 chr2L 22068512 22068598 + 13 NA Intergenic Intergenic 2038 FBgn0051700 FBgn0051700 FBtr0301969 CR31700 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1751 chr2L 12980830 12980931 + 13 NA exon (FBgn0032464, exon 2 of 2) protein_coding-exon (FBgn0032464, exon 2 of 2) 2094 FBgn0032464 FBgn0032464 FBtr0080421 Vha68-3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12151 chr3R 24464039 24464093 + 13 NA exon (FBgn0039591, exon 3 of 3) protein_coding-exon (FBgn0039591, exon 3 of 3) 1932 FBgn0039591 FBgn0039591 FBtr0085305 CG9988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9395 chr3R 3707117 3707563 + 13 NA intron (FBgn0037525, intron 2 of 14) protein_coding-intron (FBgn0037525, intron 2 of 14) 5115 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10932 chr3R 15411043 15411127 + 13 NA promoter-TSS (FBgn0065080) snoRNA-promoter-TSS (FBgn0065080) -833 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_10401 chr3R 11900720 11901153 + 13 NA exon (FBgn0026059, exon 1 of 7) protein_coding-exon (FBgn0026059, exon 1 of 7) 950 FBgn0026059 FBgn0026059 FBtr0303845 Mhcl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4338 chr2R 4753468 4753522 + 13 NA exon (FBgn0011286, exon 3 of 27) protein_coding-exon (FBgn0011286, exon 3 of 27) 5626 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6304 chr2RHet 58406 58589 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6391 chr2RHet 664034 664210 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8079 chr3L 14670726 14670798 + 13 NA exon (FBgn0036436, exon 1 of 2) protein_coding-exon (FBgn0036436, exon 1 of 2) 485 FBgn0036436 FBgn0036436 FBtr0075712 CG4914 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8921 chr3LHet 2201422 2201615 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6128 chr2R 19627196 19627442 + 13 NA intron (FBgn0000562, intron 2 of 7) protein_coding-intron (FBgn0000562, intron 2 of 7) -5718 FBgn0263543 FBgn0263543 FBtr0309652 mir-4979 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3993 chr2R 1343470 1343544 + 13 NA TTS (FBgn0259247) protein_coding-TTS (FBgn0259247) 39650 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_27 chr2L 340723 340832 + 13 NA exon (FBgn0004611, exon 11 of 17) protein_coding-exon (FBgn0004611, exon 11 of 17) -8442 FBgn0051921 FBgn0051921 FBtr0078096 CG31921 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7977 chr3L 13865272 13865449 + 13 NA exon (FBgn0264006, exon 17 of 17) protein_coding-exon (FBgn0264006, exon 17 of 17) -5355 FBgn0036381 FBgn0036381 FBtr0075801 CG8745 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7706 chr3L 11901473 11901527 + 13 NA Intergenic Intergenic 9795 FBgn0263615 FBgn0263615 FBtr0309979 CR43624 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7417 chr3L 8570311 8570412 + 13 NA Intergenic Intergenic -1183 FBgn0035911 FBgn0035911 FBtr0076651 CG6638 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10980 chr3R 15634294 15634453 + 13 NA intron (FBgn0014135, intron 2 of 4) protein_coding-intron (FBgn0014135, intron 2 of 4) 5961 FBgn0051471 FBgn0051471 FBtr0083794 tRNA:CR31471 tRNA Nup98-S2-pascual-garcia2017_R1_peak_10027 chr3R 8940160 8940345 + 13 NA intron (FBgn0038118, intron 11 of 17) protein_coding-intron (FBgn0038118, intron 11 of 17) 25231 FBgn0085337 FBgn0085337 FBtr0112504 CG34308 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8269 chr3L 16492078 16492178 + 13 NA exon (FBgn0003515, exon 4 of 7) protein_coding-exon (FBgn0003515, exon 4 of 7) 1377 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4834 chr2R 8540271 8540335 + 13 NA promoter-TSS (FBgn0033762) protein_coding-promoter-TSS (FBgn0033762) -9 FBgn0033762 FBgn0033762 FBtr0087844 CG8632 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13286 chrUextra 71763 71910 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5857 chr2R 17450106 17450389 + 13 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 13293 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_869 chr2L 6306341 6306440 + 13 NA intron (FBgn0053531, intron 15 of 17) protein_coding-intron (FBgn0053531, intron 15 of 17) 2361 FBgn0264543 FBgn0264543 FBtr0333243 CG43922 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6779 chr3L 1056793 1056981 + 13 NA intron (FBgn0004870, intron 1 of 3) protein_coding-intron (FBgn0004870, intron 1 of 3) 21702 FBgn0035181 FBgn0035181 FBtr0072622 CG9205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13067 chrU 127244 127452 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6370 chr2RHet 556758 556861 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12876 chr3RHet 1694783 1694876 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1026 chr2L 7911849 7912005 + 13 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -21333 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5884 chr2R 17481813 17481897 + 13 NA Intergenic Intergenic 3964 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3134 chr2L 19983830 19984015 + 13 NA intron (FBgn0264443, intron 2 of 5) protein_coding-intron (FBgn0264443, intron 2 of 5) 5093 FBgn0263611 FBgn0263611 FBtr0309974 CR43620 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4063 chr2R 2609019 2609231 + 13 NA exon (FBgn0010482, exon 26 of 26) protein_coding-exon (FBgn0010482, exon 26 of 26) -2087 FBgn0033097 FBgn0033097 FBtr0306802 CG9430 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7412 chr3L 8474348 8474513 + 13 NA intron (FBgn0262719, intron 3 of 7) protein_coding-intron (FBgn0262719, intron 2 of 6) 25816 FBgn0262719 FBgn0262719 FBtr0308608 CG43163 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6723 chr3L 482767 482821 + 13 NA intron (FBgn0001316, intron 4 of 18) protein_coding-intron (FBgn0001316, intron 5 of 18) 17657 FBgn0085296 FBgn0085296 FBtr0112462 CG34267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8879 chr3LHet 1052535 1052651 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6485 chr2RHet 1570744 1571053 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2482 chr2L 16548036 16548134 + 13 NA intron (FBgn0259735, intron 1 of 4) protein_coding-intron (FBgn0259735, intron 1 of 2) 1874 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10672 chr3R 13580903 13581008 + 13 NA exon (FBgn0038542, exon 3 of 6) protein_coding-exon (FBgn0038542, exon 3 of 6) 7248 FBgn0038542 FBgn0038542 FBtr0083532 TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12669 chr3R 27065992 27066256 + 13 NA intron (FBgn0051005, intron 5 of 7) protein_coding-intron (FBgn0051005, intron 5 of 7) -5121 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6355 chr2RHet 496831 496943 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11301 chr3R 18118387 18118481 + 13 NA promoter-TSS (FBgn0262382) pre_miRNA-promoter-TSS (FBgn0262382) -214 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6265 chr2R 20918558 20918654 + 13 NA TTS (FBgn0004055) protein_coding-TTS (FBgn0004055) -1297 FBgn0035092 FBgn0035092 FBtr0110861 Nplp1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3667 chr2L 22257071 22257194 + 13 NA intron (FBgn0032988, intron 5 of 6) protein_coding-intron (FBgn0032988, intron 4 of 5) 7254 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8590 chr3L 20155659 20155744 + 13 NA exon (FBgn0261556, exon 4 of 15) protein_coding-exon (FBgn0261556, exon 4 of 15) -21994 FBgn0036942 FBgn0036942 FBtr0074864 CG7328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1270 chr2L 8907212 8907290 + 13 NA intron (FBgn0085427, intron 1 of 11) protein_coding-intron (FBgn0085427, intron 1 of 10) 8447 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11997 chr3R 23883910 23883995 + 13 NA intron (FBgn0085391, intron 2 of 8) protein_coding-intron (FBgn0085391, intron 3 of 9) 31618 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8273 chr3L 16503155 16503322 + 13 NA intron (FBgn0263131, intron 19 of 28) protein_coding-intron (FBgn0263131, intron 19 of 30) 12487 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5474 chr2R 14128958 14129054 + 13 NA Intergenic Intergenic 8738 FBgn0000658 FBgn0000658 FBtr0086754 fj protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10075 chr3R 9317382 9317535 + 13 NA Intergenic Intergenic -25630 FBgn0040554 FBgn0040554 FBtr0309274 CR17025 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_460 chr2L 3070483 3070625 + 13 NA exon (FBgn0015600, exon 11 of 11) protein_coding-exon (FBgn0015600, exon 11 of 11) 12092 FBgn0027571 FBgn0027571 FBtr0290093 CG3523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2957 chr2L 19079908 19080004 + 13 NA promoter-TSS (FBgn0032754) protein_coding-promoter-TSS (FBgn0032754) -928 FBgn0032754 FBgn0032754 FBtr0081171 CG10700 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1458 chr2L 10696628 10696839 + 13 NA exon (FBgn0032286, exon 1 of 1) protein_coding-exon (FBgn0032286, exon 1 of 1) 1291 FBgn0032286 FBgn0032286 FBtr0304136 CG7300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12942 chr4 570918 571044 + 13 NA intron (FBgn0026869, intron 3 of 5) protein_coding-intron (FBgn0026869, intron 3 of 5) 7499 FBgn0026869 FBgn0026869 FBtr0089106 Thd1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4972 chr2R 9594089 9594323 + 13 NA exon (FBgn0000633, exon 4 of 13) protein_coding-exon (FBgn0000633, exon 4 of 13) -13332 FBgn0033865 FBgn0033865 FBtr0087650 CG6220 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7753 chr3L 12291486 12291655 + 13 NA Intergenic Intergenic -2347 FBgn0036274 FBgn0036274 FBtr0301071 CG4328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_367 chr2L 2083643 2083744 + 13 NA intron (FBgn0053516, intron 2 of 7) protein_coding-intron (FBgn0053516, intron 2 of 7) 3716 FBgn0031388 FBgn0031388 FBtr0077827 CG12674 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3585 chr2L 22041219 22041434 + 13 NA exon (FBgn0051601, exon 7 of 7) protein_coding-exon (FBgn0051601, exon 7 of 7) 2461 FBgn0051601 FBgn0051601 FBtr0308578 CG31601 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5316 chr2R 12568103 12568189 + 13 NA intron (FBgn0050463, intron 2 of 6) protein_coding-intron (FBgn0050463, intron 7 of 11) 3352 FBgn0050463 FBgn0050463 FBtr0113381 CG30463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_110 chr2L 916966 917336 + 13 NA exon (FBgn0046113, exon 10 of 11) protein_coding-exon (FBgn0046113, exon 10 of 11) 3065 FBgn0046113 FBgn0046113 FBtr0273244 GluRIIC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11788 chr3R 23040208 23040426 + 13 NA Intergenic Intergenic 3379 FBgn0054006 FBgn0054006 FBtr0303711 CG34006 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8829 chr3L 24179339 24179452 + 13 NA intron (FBgn0011288, intron 4 of 7) protein_coding-intron (FBgn0011288, intron 4 of 7) 112066 FBgn0011288 FBgn0011288 FBtr0304626 Snap25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6960 chr3L 2890899 2890996 + 13 NA intron (FBgn0035379, intron 1 of 5) protein_coding-intron (FBgn0035379, intron 1 of 5) 1219 FBgn0035379 FBgn0035379 FBtr0073011 spz5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4551 chr2R 6258406 6258463 + 13 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 8624 FBgn0041242 FBgn0041242 FBtr0303149 Gr47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12060 chr3R 24097926 24098167 + 13 NA Intergenic Intergenic -7551 FBgn0262587 FBgn0262587 FBtr0305116 CG43124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5360 chr2R 13113138 13113346 + 13 NA intron (FBgn0261642, intron 2 of 9) protein_coding-intron (FBgn0261642, intron 2 of 9) 20529 FBgn0262882 FBgn0262882 FBtr0306290 CG43237 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10065 chr3R 9255390 9255603 + 13 NA intron (FBgn0004049, intron 8 of 8) protein_coding-intron (FBgn0004049, intron 9 of 9) 3327 FBgn0000046 FBgn0000046 FBtr0082786 Act87E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10350 chr3R 11570517 11570702 + 13 NA exon (FBgn0038355, exon 1 of 4) protein_coding-exon (FBgn0038355, exon 1 of 4) 233 FBgn0038355 FBgn0038355 FBtr0083167 CG4520 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4073 chr2R 2682828 2682983 + 13 NA intron (FBgn0085421, intron 2 of 19) protein_coding-intron (FBgn0085421, intron 2 of 19) -12212 FBgn0014028 FBgn0014028 FBtr0086156 SdhB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8182 chr3L 15898315 15898508 + 13 NA exon (FBgn0036544, exon 9 of 16) protein_coding-exon (FBgn0036544, exon 9 of 16) -6282 FBgn0036542 FBgn0036542 FBtr0100034 pHCl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9308 chr3R 3069425 3069479 + 13 NA TTS (FBgn0037489) protein_coding-TTS (FBgn0037489) 1970 FBgn0037488 FBgn0037488 FBtr0303218 CG14607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5087 chr2R 10606989 10607225 + 13 NA Intergenic Intergenic -5980 FBgn0020269 FBgn0020269 FBtr0087477 mspo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10318 chr3R 11385952 11386006 + 13 NA Intergenic Intergenic -7485 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10255 chr3R 10875801 10875965 + 13 NA Intergenic Intergenic 12795 FBgn0038281 FBgn0038281 FBtr0083024 RpL10Aa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11547 chr3R 21909418 21909539 + 13 NA intron (FBgn0039411, intron 5 of 10) protein_coding-intron (FBgn0039411, intron 5 of 10) 14955 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1662 chr2L 12594425 12594536 + 13 NA exon (FBgn0085424, exon 2 of 6) protein_coding-exon (FBgn0085424, exon 2 of 6) -23868 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2993 chr2L 19261920 19262125 + 13 NA exon (FBgn0051797, exon 2 of 2) protein_coding-exon (FBgn0051797, exon 2 of 2) 871 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4761 chr2R 7847900 7848212 + 13 NA intron (FBgn0033668, intron 3 of 9) protein_coding-intron (FBgn0033668, intron 3 of 8) 8297 FBgn0033669 FBgn0033669 FBtr0088053 PI31 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2552 chr2L 16944959 16945123 + 13 NA exon (FBgn0262355, exon 2 of 2) protein_coding-exon (FBgn0262355, exon 2 of 2) 333 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_670 chr2L 4616460 4616659 + 13 NA Intergenic Intergenic -24596 FBgn0053196 FBgn0053196 FBtr0332355 dp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2655 chr2L 17286972 17287112 + 13 NA exon (FBgn0032631, exon 3 of 3) protein_coding-exon (FBgn0032631, exon 3 of 3) 748 FBgn0032631 FBgn0032631 FBtr0302408 CG15140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6708 chr3L 370886 371175 + 13 NA exon (FBgn0262139, exon 4 of 10) protein_coding-exon (FBgn0262139, exon 4 of 10) -4593 FBgn0035138 FBgn0035138 FBtr0072568 CG13884 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10023 chr3R 8901554 8901688 + 13 NA intron (FBgn0004666, intron 6 of 7) protein_coding-intron (FBgn0004666, intron 6 of 7) -10325 FBgn0262365 FBgn0262365 FBtr0304647 CG43063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3591 chr2L 22055718 22055942 + 13 NA Intergenic Intergenic -1585 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7236 chr3L 6871786 6871903 + 13 NA Intergenic Intergenic 35220 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7837 chr3L 12857898 12858017 + 13 NA Intergenic Intergenic -2026 FBgn0036320 FBgn0036320 FBtr0075936 CG10943 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3271 chr2L 20687776 20687922 + 13 NA exon (FBgn0014859, exon 4 of 5) protein_coding-exon (FBgn0014859, exon 4 of 5) 5479 FBgn0032877 FBgn0032877 FBtr0081391 CG2617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10352 chr3R 11579279 11579531 + 13 NA Intergenic Intergenic 9029 FBgn0038355 FBgn0038355 FBtr0083167 CG4520 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2140 chr2L 14976565 14976886 + 13 NA exon (FBgn0086711, exon 7 of 8) protein_coding-exon (FBgn0086711, exon 7 of 8) -4425 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11507 chr3R 21773534 21773674 + 13 NA intron (FBgn0039396, intron 1 of 6) protein_coding-intron (FBgn0039396, intron 1 of 6) 8388 FBgn0039396 FBgn0039396 FBtr0304043 CcapR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10324 chr3R 11402578 11402797 + 13 NA Intergenic Intergenic -24193 FBgn0038350 FBgn0038350 FBtr0083150 CG18516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8018 chr3L 14159725 14159834 + 13 NA Intergenic Intergenic 11941 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12537 chr3R 26475406 26475460 + 13 NA promoter-TSS (FBgn0085462) protein_coding-promoter-TSS (FBgn0085462) -250 FBgn0085462 FBgn0085462 FBtr0304711 CG34433 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1872 chr2L 14039814 14040007 + 13 NA promoter-TSS (FBgn0028875) protein_coding-promoter-TSS (FBgn0028875) -260 FBgn0028875 FBgn0028875 FBtr0309867 nAcRalpha-34E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5562 chr2R 14937497 14937689 + 13 NA Intergenic Intergenic 5836 FBgn0034415 FBgn0034415 FBtr0086596 CG15116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4896 chr2R 8983792 8983894 + 13 NA Intergenic Intergenic -16800 FBgn0033791 FBgn0033791 FBtr0087794 Drl-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4020 chr2R 1814652 1814956 + 13 NA exon (FBgn0263109, exon 4 of 4) protein_coding-exon (FBgn0263109, exon 4 of 4) -30556 FBgn0033047 FBgn0033047 FBtr0085966 CG7882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1100 chr2L 8573404 8573560 + 13 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 2594 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_11061 chr3R 16079801 16079855 + 13 NA intron (FBgn0262582, intron 2 of 18) protein_coding-intron (FBgn0262582, intron 2 of 18) -39159 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8070 chr3L 14603991 14604279 + 13 NA Intergenic Intergenic -3423 FBgn0003388 FBgn0003388 FBtr0304700 shd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6000 chr2R 18649024 18649207 + 13 NA intron (FBgn0259145, intron 2 of 11) protein_coding-intron (FBgn0259145, intron 2 of 11) -2124 FBgn0034776 FBgn0034776 FBtr0071880 CG13527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12548 chr3R 26584620 26584732 + 13 NA Intergenic Intergenic -6972 FBgn0004606 FBgn0004606 FBtr0085702 zfh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11887 chr3R 23420277 23420369 + 13 NA Intergenic Intergenic -1063 FBgn0039527 FBgn0039527 FBtr0085202 CG5639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7700 chr3L 11864201 11864374 + 13 NA exon (FBgn0036217, exon 1 of 1) protein_coding-exon (FBgn0036217, exon 1 of 1) 118 FBgn0036217 FBgn0036217 FBtr0076071 CG5906 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11094 chr3R 16265488 16265631 + 13 NA intron (FBgn0262869, intron 1 of 19) protein_coding-intron (FBgn0262869, intron 1 of 19) 31572 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4652 chr2R 7233298 7233479 + 13 NA promoter-TSS (FBgn0010357) protein_coding-promoter-TSS (FBgn0010357) 183 FBgn0010425 FBgn0010425 FBtr0088160 epsilonTry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4514 chr2R 6098715 6098909 + 13 NA promoter-TSS (FBgn0000448) protein_coding-promoter-TSS (FBgn0000448) -11616 FBgn0085250 FBgn0085250 FBtr0299834 CG34221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2829 chr2L 18068833 18068959 + 13 NA exon (FBgn0243486, exon 15 of 15) protein_coding-exon (FBgn0243486, exon 15 of 15) -9373 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10829 chr3R 14538326 14538388 + 13 NA exon (FBgn0015323, exon 2 of 2) protein_coding-exon (FBgn0015323, exon 2 of 2) 7101 FBgn0000303 FBgn0000303 FBtr0089368 Cha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2149 chr2L 15021824 15022040 + 13 NA intron (FBgn0260446, intron 2 of 15) protein_coding-intron (FBgn0260446, intron 2 of 15) 4778 FBgn0260446 FBgn0260446 FBtr0304731 GABA-B-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3366 chr2L 21277582 21277642 + 13 NA exon (FBgn0032938, exon 8 of 11) protein_coding-exon (FBgn0032938, exon 8 of 11) 6661 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_299 chr2L 1565739 1566032 + 13 NA intron (FBgn0261509, intron 2 of 9) protein_coding-intron (FBgn0261509, intron 2 of 10) 10755 FBgn0261509 FBgn0261509 FBtr0310020 haf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3635 chr2L 22162188 22162857 + 13 NA exon (FBgn0261802, exon 6 of 6) protein_coding-exon (FBgn0261802, exon 6 of 6) 6621 FBgn0032979 FBgn0032979 FBtr0085964 CG1832 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4621 chr2R 7003709 7003885 + 13 NA Intergenic Intergenic 5556 FBgn0050489 FBgn0050489 FBtr0089419 Cyp12d1-p protein_coding Nup98-S2-pascual-garcia2017_R1_peak_139 chr2L 991154 991208 + 13 NA Intergenic Intergenic 35709 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9475 chr3R 4339776 4339908 + 13 NA Intergenic Intergenic -1098 FBgn0037591 FBgn0037591 FBtr0081899 Or85c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12175 chr3R 24545607 24545968 + 13 NA exon (FBgn0027655, exon 18 of 29) protein_coding-exon (FBgn0027655, exon 18 of 29) 23823 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12284 chr3R 25057086 25057203 + 13 NA exon (FBgn0028476, exon 4 of 6) protein_coding-exon (FBgn0028476, exon 4 of 6) 2261 FBgn0028476 FBgn0028476 FBtr0300833 CG15817 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1349 chr2L 9533150 9533204 + 13 NA intron (FBgn0032123, intron 2 of 7) protein_coding-intron (FBgn0032123, intron 2 of 8) 4662 FBgn0032122 FBgn0032122 FBtr0079829 CG31883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12177 chr3R 24548017 24548196 + 13 NA intron (FBgn0027655, intron 21 of 28) protein_coding-intron (FBgn0027655, intron 21 of 28) 22379 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12598 chr3R 26788881 26788935 + 13 NA TTS (FBgn0039812) protein_coding-TTS (FBgn0039812) 1134 FBgn0062411 FBgn0062411 FBtr0085750 Ctr1C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_174 chr2L 1196292 1196504 + 13 NA exon (FBgn0031322, exon 6 of 6) protein_coding-exon (FBgn0031322, exon 6 of 6) 2806 FBgn0031323 FBgn0031323 FBtr0077977 CG5139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11904 chr3R 23479982 23480185 + 13 NA TTS (FBgn0027494) protein_coding-TTS (FBgn0027494) 1601 FBgn0027494 FBgn0027494 FBtr0085194 RpS10a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6081 chr2R 19298939 19299047 + 13 NA TTS (FBgn0034860) protein_coding-TTS (FBgn0034860) -4475 FBgn0050411 FBgn0050411 FBtr0072016 CG30411 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4927 chr2R 9259502 9259716 + 13 NA Intergenic Intergenic 5610 FBgn0033830 FBgn0033830 FBtr0087720 CG10814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8101 chr3L 14945615 14945806 + 13 NA Intergenic Intergenic -6485 FBgn0040487 FBgn0040487 FBtr0075673 BobA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5937 chr2R 18051071 18051154 + 13 NA TTS (FBgn0085235) protein_coding-TTS (FBgn0085235) 987 FBgn0085235 FBgn0085235 FBtr0112399 CG34206 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2460 chr2L 16395827 16395975 + 13 NA Intergenic Intergenic 21983 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_10720 chr3R 13880265 13880340 + 13 NA Intergenic Intergenic -5219 FBgn0010389 FBgn0010389 FBtr0083550 htl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4613 chr2R 6862064 6862222 + 13 NA Intergenic Intergenic -32937 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2145 chr2L 14999728 14999803 + 13 NA Intergenic Intergenic -2206 FBgn0086711 FBgn0086711 FBtr0332521 mol protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2086 chr2L 14787841 14787947 + 13 NA Intergenic Intergenic -3308 FBgn0032551 FBgn0032551 FBtr0080688 CG18636 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6437 chr2RHet 1084565 1084662 + 13 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7407 chr3L 8427531 8427695 + 13 NA intron (FBgn0263352, intron 8 of 8) protein_coding-intron (FBgn0263352, intron 10 of 10) 4177 FBgn0263352 FBgn0263352 FBtr0076661 Unr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8219 chr3L 16174217 16174323 + 13 NA Intergenic Intergenic -9790 FBgn0053795 FBgn0053795 FBtr0091799 CG33795 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10177 chr3R 10108500 10108633 + 13 NA intron (FBgn0003862, intron 1 of 7) protein_coding-intron (FBgn0003862, intron 1 of 8) 4057 FBgn0003862 FBgn0003862 FBtr0100277 trx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10675 chr3R 13599576 13599736 + 13 NA exon (FBgn0262562, exon 1 of 13) protein_coding-exon (FBgn0262562, exon 1 of 13) -11453 FBgn0038542 FBgn0038542 FBtr0083532 TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4423 chr2R 5357985 5358119 + 13 NA intron (FBgn0259234, intron 6 of 18) protein_coding-intron (FBgn0259234, intron 6 of 18) -15599 FBgn0053757 FBgn0053757 FBtr0091758 CG33757 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4632 chr2R 7140907 7141190 + 13 NA promoter-TSS (FBgn0033597) protein_coding-promoter-TSS (FBgn0033597) -145 FBgn0033597 FBgn0033597 FBtr0088190 Cpr47Ea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6031 chr2R 18904525 18904615 + 13 NA intron (FBgn0261705, intron 3 of 4) protein_coding-intron (FBgn0261705, intron 3 of 4) -18164 FBgn0034808 FBgn0034808 FBtr0071988 CG9896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5003 chr2R 9760120 9760174 + 13 NA exon (FBgn0013733, exon 19 of 31) protein_coding-exon (FBgn0013733, exon 19 of 31) 10630 FBgn0033884 FBgn0033884 FBtr0087586 CG13344 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13507 chrX 3232577 3232683 + 13 NA exon (FBgn0000479, exon 14 of 15) protein_coding-exon (FBgn0000479, exon 14 of 15) -22195 FBgn0029656 FBgn0029656 FBtr0070536 CG10793 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6013 chr2R 18763611 18763712 + 13 NA intron (FBgn0034789, intron 4 of 14) protein_coding-intron (FBgn0034789, intron 4 of 13) 1367 FBgn0034789 FBgn0034789 FBtr0304923 PIP5K59B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5339 chr2R 12868763 12868865 + 13 NA intron (FBgn0004580, intron 1 of 10) protein_coding-intron (FBgn0004580, intron 1 of 10) 7349 FBgn0004580 FBgn0004580 FBtr0087056 Cbp53E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11269 chr3R 17685195 17685268 + 13 NA Intergenic Intergenic -3247 FBgn0015229 FBgn0015229 FBtr0084157 glec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3545 chr2L 21972933 21973071 + 13 NA Intergenic Intergenic 19931 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8753 chr3L 23586265 23586328 + 13 NA intron (FBgn0250816, intron 4 of 6) protein_coding-intron (FBgn0250816, intron 4 of 7) 37271 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8028 chr3L 14231645 14231895 + 13 NA TTS (FBgn0036417) protein_coding-TTS (FBgn0036417) 2035 FBgn0036417 FBgn0036417 FBtr0075741 CG7906 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3699 chr2L 22347127 22347344 + 13 NA intron (FBgn0039972, intron 2 of 7) protein_coding-intron (FBgn0039972, intron 1 of 6) 6613 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5566 chr2R 14954699 14954797 + 13 NA promoter-TSS (FBgn0004168) protein_coding-promoter-TSS (FBgn0004168) 88 FBgn0004168 FBgn0004168 FBtr0086577 5-HT1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1262 chr2L 8886659 8886866 + 13 NA Intergenic Intergenic -4727 FBgn0261630 FBgn0261630 FBtr0302995 CG42713 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6229 chr2R 20518666 20518861 + 13 NA exon (FBgn0015040, exon 1 of 3) protein_coding-exon (FBgn0015040, exon 1 of 3) 177 FBgn0015040 FBgn0015040 FBtr0072321 Cyp9c1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1003 chr2L 7530927 7531016 + 13 NA intron (FBgn0085403, intron 2 of 4) protein_coding-intron (FBgn0085403, intron 3 of 5) -15711 FBgn0085403 FBgn0085403 FBtr0112606 Rapgap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3373 chr2L 21292555 21292692 + 13 NA exon (FBgn0264556, exon 1 of 4) protein_coding-exon (FBgn0264556, exon 1 of 4) -3691 FBgn0264556 FBgn0264556 FBtr0081511 Gr39a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12335 chr3R 25277409 25277529 + 13 NA intron (FBgn0004369, intron 8 of 18) protein_coding-intron (FBgn0004369, intron 8 of 18) -27951 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_278 chr2L 1480654 1480815 + 13 NA Intergenic Intergenic -11561 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2450 chr2L 16292274 16292380 + 12 NA TTS (FBgn0028896) protein_coding-TTS (FBgn0028896) 643 FBgn0032582 FBgn0032582 FBtr0305564 CG13258 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9851 chr3R 7593486 7593646 + 12 NA TTS (FBgn0086910) protein_coding-TTS (FBgn0086910) -7766 FBgn0017581 FBgn0017581 FBtr0082535 Lk6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7730 chr3L 12092581 12092642 + 12 NA Intergenic Intergenic 10885 FBgn0036246 FBgn0036246 FBtr0075990 CG17154 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1904 chr2L 14265163 14265237 + 12 NA intron (FBgn0261563, intron 1 of 12) protein_coding-intron (FBgn0261563, intron 1 of 15) 2173 FBgn0261563 FBgn0261563 FBtr0302735 wb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7794 chr3L 12552203 12552329 + 12 NA intron (FBgn0036302, intron 3 of 9) protein_coding-intron (FBgn0036302, intron 3 of 12) 13376 FBgn0036302 FBgn0036302 FBtr0332042 sowah protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4777 chr2R 7964729 7964783 + 12 NA exon (FBgn0033679, exon 2 of 7) protein_coding-exon (FBgn0033679, exon 2 of 7) 2292 FBgn0033679 FBgn0033679 FBtr0088022 CG8888 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4358 chr2R 4895040 4895197 + 12 NA exon (FBgn0033362, exon 5 of 5) protein_coding-exon (FBgn0033362, exon 5 of 5) -1026 FBgn0085379 FBgn0085379 FBtr0112560 CG34350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10856 chr3R 14773436 14773541 + 12 NA exon (FBgn0261262, exon 5 of 19) protein_coding-exon (FBgn0261262, exon 5 of 19) -2430 FBgn0263983 FBgn0263983 FBtr0330024 CG43732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4732 chr2R 7710683 7710833 + 12 NA Intergenic Intergenic -2112 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8975 chr3R 607155 607229 + 12 NA exon (FBgn0037276, exon 4 of 4) protein_coding-exon (FBgn0037276, exon 4 of 4) -1139 FBgn0037275 FBgn0037275 FBtr0078881 CG14655 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12646 chr3R 26986109 26986260 + 12 NA intron (FBgn0086704, intron 8 of 8) protein_coding-intron (FBgn0013973, intron 16 of 16) 8641 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8232 chr3L 16258729 16258783 + 12 NA promoter-TSS (FBgn0040799) protein_coding-promoter-TSS (FBgn0040799) 271 FBgn0040798 FBgn0040798 FBtr0075463 CG13069 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2488 chr2L 16560337 16560408 + 12 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -10413 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1760 chr2L 13031061 13031402 + 12 NA exon (FBgn0262160, exon 3 of 7) protein_coding-exon (FBgn0262160, exon 3 of 7) -9924 FBgn0028965 FBgn0028965 FBtr0080427 A16 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12716 chr3R 27294680 27294898 + 12 NA Intergenic Intergenic 5722 FBgn0039850 FBgn0039850 FBtr0085789 CG11333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_938 chr2L 6889379 6889546 + 12 NA intron (FBgn0031866, intron 1 of 12) protein_coding-intron (FBgn0031866, intron 1 of 12) -12615 FBgn0262205 FBgn0262205 FBtr0304244 mir-932 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_4314 chr2R 4650894 4650948 + 12 NA Intergenic Intergenic 26046 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12758 chr3R 27525321 27525441 + 12 NA Intergenic Intergenic 8681 FBgn0261583 FBgn0261583 FBtr0302894 CG42693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5737 chr2R 16393671 16393862 + 12 NA TTS (FBgn0043535) protein_coding-TTS (FBgn0043535) 1094 FBgn0043535 FBgn0043535 FBtr0086294 Obp57a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1030 chr2L 7938152 7938324 + 12 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) 38827 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1139 chr2L 8638632 8638781 + 12 NA intron (FBgn0011259, intron 4 of 20) protein_coding-intron (FBgn0011259, intron 4 of 21) 18678 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4054 chr2R 2411281 2411442 + 12 NA intron (FBgn0086655, intron 1 of 6) protein_coding-intron (FBgn0086655, intron 1 of 2) 9739 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11885 chr3R 23417668 23417786 + 12 NA intron (FBgn0039527, intron 1 of 4) protein_coding-intron (FBgn0039527, intron 1 of 4) 1533 FBgn0039527 FBgn0039527 FBtr0085202 CG5639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1851 chr2L 13928161 13928266 + 12 NA intron (FBgn0032536, intron 7 of 8) protein_coding-intron (FBgn0032536, intron 7 of 8) 3011 FBgn0261628 FBgn0261628 FBtr0302989 CG42711 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12275 chr3R 25003946 25004135 + 12 NA intron (FBgn0039647, intron 3 of 7) protein_coding-intron (FBgn0039647, intron 3 of 6) 12525 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8058 chr3L 14489964 14490030 + 12 NA intron (FBgn0087007, intron 4 of 8) protein_coding-intron (FBgn0087007, intron 4 of 8) -20928 FBgn0036426 FBgn0036426 FBtr0290282 CG9592 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_956 chr2L 7095007 7095170 + 12 NA Intergenic Intergenic -10454 FBgn0031888 FBgn0031888 FBtr0079423 Pvf2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7743 chr3L 12212438 12212526 + 12 NA intron (FBgn0260941, intron 2 of 9) protein_coding-intron (FBgn0260941, intron 4 of 9) -4932 FBgn0260941 FBgn0260941 FBtr0301053 app protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4770 chr2R 7939924 7940106 + 12 NA promoter-TSS (FBgn0028407) protein_coding-promoter-TSS (FBgn0028407) -755 FBgn0050039 FBgn0050039 FBtr0088023 CG30039 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_132 chr2L 973334 973458 + 12 NA Intergenic Intergenic 50603 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11625 chr3R 22227640 22227768 + 12 NA TTS (FBgn0039424) protein_coding-TTS (FBgn0039424) 1674 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5240 chr2R 11931708 11931898 + 12 NA exon (FBgn0034070, exon 12 of 15) protein_coding-exon (FBgn0034070, exon 12 of 15) -3374 FBgn0034071 FBgn0034071 FBtr0087210 CG8405 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12398 chr3R 25511620 25511820 + 12 NA TTS (FBgn0013972) protein_coding-TTS (FBgn0013972) 3313 FBgn0039682 FBgn0039682 FBtr0085463 Obp99c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10196 chr3R 10284861 10285076 + 12 NA intron (FBgn0086901, intron 2 of 15) protein_coding-intron (FBgn0086901, intron 1 of 14) 22442 FBgn0086901 FBgn0086901 FBtr0112631 cv-c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11986 chr3R 23847539 23847711 + 12 NA Intergenic Intergenic -4709 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_67 chr2L 745879 746070 + 12 NA Intergenic Intergenic -1579 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12780 chr3R 27659474 27659555 + 12 NA exon (FBgn0039883, exon 3 of 8) protein_coding-exon (FBgn0039883, exon 3 of 8) 7948 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2265 chr2L 15484301 15484499 + 12 NA promoter-TSS (FBgn0020371) protein_coding-promoter-TSS (FBgn0020371) -368 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2610 chr2L 17111588 17111756 + 12 NA Intergenic Intergenic 14289 FBgn0051784 FBgn0051784 FBtr0302499 CG31784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10869 chr3R 14842732 14842912 + 12 NA exon (FBgn0026239, exon 5 of 6) protein_coding-exon (FBgn0026239, exon 5 of 6) 6922 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4134 chr2R 3221969 3222169 + 12 NA exon (FBgn0033159, exon 9 of 24) protein_coding-exon (FBgn0033159, exon 9 of 24) 23156 FBgn0033158 FBgn0033158 FBtr0088963 CG12164 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9267 chr3R 2812363 2812605 + 12 NA intron (FBgn0260642, intron 1 of 6) protein_coding-intron (FBgn0260642, intron 1 of 6) -53922 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10313 chr3R 11345341 11345539 + 12 NA Intergenic Intergenic -10880 FBgn0038346 FBgn0038346 FBtr0083157 CG14872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2912 chr2L 18670194 18670344 + 12 NA promoter-TSS (FBgn0263079) protein_coding-promoter-TSS (FBgn0263079) 918 FBgn0263079 FBgn0263079 FBtr0306921 CG43338 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3191 chr2L 20375126 20375228 + 12 NA Intergenic Intergenic -1210 FBgn0026756 FBgn0026756 FBtr0081372 Ugt37a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3251 chr2L 20574765 20574838 + 12 NA Intergenic Intergenic 12377 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6282 chr2R 21017201 21017278 + 12 NA exon (FBgn0050430, exon 2 of 2) protein_coding-exon (FBgn0050430, exon 2 of 2) 284 FBgn0050430 FBgn0050430 FBtr0072448 CG30430 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8910 chr3LHet 1637576 1637661 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8492 chr3L 18206951 18207092 + 12 NA Intergenic Intergenic 12427 FBgn0036782 FBgn0036782 FBtr0310156 CG7320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4002 chr2R 1521299 1521577 + 12 NA Intergenic Intergenic 18850 FBgn0033028 FBgn0033028 FBtr0086072 CG11665 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6873 chr3L 1887681 1887752 + 12 NA intron (FBgn0262624, intron 1 of 5) protein_coding-intron (FBgn0262624, intron 1 of 5) -1774 FBgn0262624 FBgn0262624 FBtr0072837 Tmhs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3732 chr2L 22491340 22491472 + 12 NA Intergenic Intergenic 18924 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2011 chr2L 14531286 14531399 + 12 NA promoter-TSS (FBgn0011866) tRNA-promoter-TSS (FBgn0011866) -418 FBgn0011866 FBgn0011866 FBtr0080663 tRNA:G3:35Be tRNA Nup98-S2-pascual-garcia2017_R1_peak_11892 chr3R 23448134 23448237 + 12 NA TTS (FBgn0039529) protein_coding-TTS (FBgn0039529) 3546 FBgn0039529 FBgn0039529 FBtr0085200 CG5612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12686 chr3R 27169709 27170015 + 12 NA intron (FBgn0085376, intron 2 of 7) protein_coding-intron (FBgn0085376, intron 2 of 16) -28287 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3316 chr2L 20942946 20943153 + 12 NA Intergenic Intergenic -8936 FBgn0032908 FBgn0032908 FBtr0306031 CG9270 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_168 chr2L 1096736 1096843 + 12 NA intron (FBgn0031299, intron 1 of 7) protein_coding-intron (FBgn0031299, intron 2 of 8) 5715 FBgn0031299 FBgn0031299 FBtr0332571 CG4629 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_401 chr2L 2495684 2495782 + 12 NA exon (FBgn0011818, exon 3 of 4) protein_coding-exon (FBgn0011818, exon 3 of 4) 2778 FBgn0011818 FBgn0011818 FBtr0077779 oaf protein_coding Nup98-S2-pascual-garcia2017_R1_peak_707 chr2L 4905557 4905776 + 12 NA intron (FBgn0031646, intron 2 of 3) protein_coding-intron (FBgn0031646, intron 2 of 3) 1089 FBgn0031646 FBgn0031646 FBtr0077403 CG2837 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1077 chr2L 8483689 8483743 + 12 NA TTS (FBgn0264340) protein_coding-TTS (FBgn0264340) 1342 FBgn0264340 FBgn0264340 FBtr0332009 CG43796 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7808 chr3L 12606964 12607117 + 12 NA intron (FBgn0015919, intron 1 of 4) protein_coding-intron (FBgn0015919, intron 1 of 4) 4309 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9085 chr3R 1587898 1588055 + 12 NA exon (FBgn0027608, exon 5 of 9) protein_coding-exon (FBgn0027608, exon 5 of 9) -3277 FBgn0262603 FBgn0262603 FBtr0078677 sec8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13720 chrX 13398545 13398745 + 12 NA intron (FBgn0052635, intron 9 of 10) protein_coding-intron (FBgn0052635, intron 9 of 10) -15891 FBgn0030491 FBgn0030491 FBtr0273441 CG15753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2090 chr2L 14799122 14799202 + 12 NA Intergenic Intergenic -2625 FBgn0028866 FBgn0028866 FBtr0080687 CG18420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13743 chrX 14685426 14685480 + 12 NA exon (FBgn0003301, exon 16 of 18) protein_coding-exon (FBgn0003301, exon 16 of 18) -4869 FBgn0015010 FBgn0015010 FBtr0073937 Ag5r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12197 chr3R 24599075 24599224 + 12 NA Intergenic Intergenic -15193 FBgn0039598 FBgn0039598 FBtr0085313 CG14061 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10918 chr3R 15287812 15287866 + 12 NA exon (FBgn0038708, exon 1 of 1) protein_coding-exon (FBgn0038708, exon 1 of 1) 949 FBgn0038708 FBgn0038708 FBtr0083769 CG6255 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11069 chr3R 16164707 16164841 + 12 NA promoter-TSS (FBgn0038789) protein_coding-promoter-TSS (FBgn0038789) -215 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12047 chr3R 24053982 24054069 + 12 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 35319 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2385 chr2L 16010855 16010966 + 12 NA intron (FBgn0028644, intron 1 of 7) protein_coding-intron (FBgn0028644, intron 1 of 7) -4631 FBgn0051820 FBgn0051820 FBtr0305220 CG31820 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12511 chr3R 26085007 26085166 + 12 NA Intergenic Intergenic 6182 FBgn0039761 FBgn0039761 FBtr0085618 CG18404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10500 chr3R 12423487 12423624 + 12 NA TTS (FBgn0038447) protein_coding-TTS (FBgn0038447) 3419 FBgn0038447 FBgn0038447 FBtr0083327 CG14892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1013 chr2L 7772805 7772937 + 12 NA intron (FBgn0031945, intron 2 of 4) protein_coding-intron (FBgn0031945, intron 2 of 4) 5156 FBgn0020880 FBgn0020880 FBtr0301151 CG7179 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10385 chr3R 11769471 11769654 + 12 NA intron (FBgn0013334, intron 2 of 9) protein_coding-intron (FBgn0013334, intron 1 of 8) 7103 FBgn0051088 FBgn0051088 FBtr0083241 CG31088 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12369 chr3R 25412579 25412633 + 12 NA TTS (FBgn0039670) protein_coding-TTS (FBgn0039670) 1216 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3166 chr2L 20225277 20225372 + 12 NA Intergenic Intergenic -22899 FBgn0259996 FBgn0259996 FBtr0302056 CG40341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1321 chr2L 9105760 9105894 + 12 NA Intergenic Intergenic -5987 FBgn0032096 FBgn0032096 FBtr0079770 Or30a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1265 chr2L 8895488 8895546 + 12 NA Intergenic Intergenic -3287 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9573 chr3R 5128837 5129087 + 12 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -18530 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8188 chr3L 15946137 15946204 + 12 NA promoter-TSS (FBgn0000489) protein_coding-promoter-TSS (FBgn0000489) -77 FBgn0000489 FBgn0000489 FBtr0075528 Pka-C3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_830 chr2L 5901038 5901187 + 12 NA Intergenic Intergenic 3562 FBgn0031747 FBgn0031747 FBtr0079154 CG9021 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12067 chr3R 24124415 24124550 + 12 NA Intergenic Intergenic 4656 FBgn0039576 FBgn0039576 FBtr0085279 CG17856 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2507 chr2L 16695630 16695824 + 12 NA intron (FBgn0261278, intron 1 of 4) protein_coding-intron (FBgn0261278, intron 3 of 6) 205 FBgn0261278 FBgn0261278 FBtr0100459 grp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5023 chr2R 10083592 10083732 + 12 NA exon (FBgn0050069, exon 5 of 5) protein_coding-exon (FBgn0050069, exon 5 of 5) 5037 FBgn0033911 FBgn0033911 FBtr0087577 VGAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4866 chr2R 8784428 8784508 + 12 NA intron (FBgn0003975, intron 4 of 7) protein_coding-intron (FBgn0003975, intron 4 of 7) 12762 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13019 chr4 1043500 1043648 + 12 NA exon (FBgn0025741, exon 2 of 10) protein_coding-exon (FBgn0025741, exon 2 of 10) 4146 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_208 chr2L 1327073 1327265 + 12 NA Intergenic Intergenic -1992 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4522 chr2R 6148457 6148594 + 12 NA TTS (FBgn0050009) ncRNA-TTS (FBgn0050009) 2806 FBgn0050009 FBgn0050009 FBtr0303450 CR30009 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7488 chr3L 9186408 9186530 + 12 NA Intergenic Intergenic -11220 FBgn0004244 FBgn0004244 FBtr0309054 Rdl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10378 chr3R 11736518 11736594 + 12 NA TTS (FBgn0038381) protein_coding-TTS (FBgn0038381) 2400 FBgn0038381 FBgn0038381 FBtr0083200 CG3303 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1767 chr2L 13108432 13108595 + 12 NA exon (FBgn0032470, exon 4 of 5) protein_coding-exon (FBgn0032470, exon 4 of 5) 1642 FBgn0032470 FBgn0032470 FBtr0301366 CG5142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12526 chr3R 26324407 26324517 + 12 NA intron (FBgn0039780, intron 3 of 7) protein_coding-intron (FBgn0039780, intron 3 of 7) 1586 FBgn0039780 FBgn0039780 FBtr0085688 PH4alphaNE1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7272 chr3L 7034123 7034246 + 12 NA exon (FBgn0260660, exon 12 of 22) protein_coding-exon (FBgn0260660, exon 12 of 22) -14290 FBgn0035730 FBgn0035730 FBtr0076932 CG17744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1860 chr2L 13983842 13983896 + 12 NA TTS (FBgn0028939) protein_coding-TTS (FBgn0028939) 3723 FBgn0028939 FBgn0028939 FBtr0080589 nimC2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2046 chr2L 14630849 14630936 + 12 NA intron (FBgn0003016, intron 3 of 11) protein_coding-intron (FBgn0003016, intron 3 of 10) 14623 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3000 chr2L 19280656 19280727 + 12 NA Intergenic Intergenic -17798 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9967 chr3R 8577129 8577183 + 12 NA intron (FBgn0038084, intron 3 of 5) protein_coding-intron (FBgn0038084, intron 3 of 5) -7754 FBgn0038083 FBgn0038083 FBtr0302379 CG5999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9471 chr3R 4324856 4324926 + 12 NA Intergenic Intergenic 12189 FBgn0037590 FBgn0037590 FBtr0081900 Or85b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10158 chr3R 9918425 9918479 + 12 NA TTS (FBgn0038198) protein_coding-TTS (FBgn0038198) 1956 FBgn0038198 FBgn0038198 FBtr0082889 Npc2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1080 chr2L 8487204 8487320 + 12 NA exon (FBgn0262029, exon 5 of 7) protein_coding-exon (FBgn0262029, exon 5 of 7) 1537 FBgn0263489 FBgn0263489 FBtr0309788 unsRNA:d-a ncRNA Nup98-S2-pascual-garcia2017_R1_peak_832 chr2L 5916904 5917048 + 12 NA exon (FBgn0043362, exon 10 of 18) protein_coding-exon (FBgn0043362, exon 10 of 18) 6677 FBgn0031751 FBgn0031751 FBtr0079152 CG9016 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7437 chr3L 8738057 8738160 + 12 NA exon (FBgn0003149, exon 1 of 9) protein_coding-exon (FBgn0003149, exon 1 of 9) 4718 FBgn0040828 FBgn0040828 FBtr0076592 CG13306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11647 chr3R 22326512 22326659 + 12 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 34354 FBgn0039431 FBgn0039431 FBtr0302210 CG6490 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2148 chr2L 15021209 15021328 + 12 NA exon (FBgn0260446, exon 2 of 16) protein_coding-exon (FBgn0260446, exon 2 of 16) 4114 FBgn0260446 FBgn0260446 FBtr0304731 GABA-B-R1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1607 chr2L 12111211 12111321 + 12 NA TTS (FBgn0263234) protein_coding-TTS (FBgn0263234) 156 FBgn0263235 FBgn0263235 FBtr0302854 Phae2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6926 chr3L 2385796 2385975 + 12 NA intron (FBgn0035338, intron 1 of 1) protein_coding-intron (FBgn0035338, intron 1 of 1) -3380 FBgn0261858 FBgn0261858 FBtr0303463 CG42787 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10761 chr3R 14151760 14151966 + 12 NA exon (FBgn0051235, exon 2 of 5) protein_coding-exon (FBgn0051235, exon 2 of 5) 2798 FBgn0051235 FBgn0051235 FBtr0083588 CG31235 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9690 chr3R 6317719 6317785 + 12 NA Intergenic Intergenic 21026 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6415 chr2RHet 852797 852947 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3195 chr2L 20379938 20380042 + 12 NA intron (FBgn0032856, intron 1 of 5) protein_coding-intron (FBgn0032856, intron 1 of 5) 2365 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_274 chr2L 1473448 1473569 + 12 NA Intergenic Intergenic -18787 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7740 chr3L 12188988 12189055 + 12 NA Intergenic Intergenic -1870 FBgn0036264 FBgn0036264 FBtr0076005 CG11529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_103 chr2L 899751 900098 + 12 NA exon (FBgn0002563, exon 2 of 2) protein_coding-exon (FBgn0002563, exon 2 of 2) 1280 FBgn0002563 FBgn0002563 FBtr0078025 Lsp1beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5191 chr2R 11475289 11475393 + 12 NA Intergenic Intergenic -13845 FBgn0034033 FBgn0034033 FBtr0087349 CG8204 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9007 chr3R 822590 822739 + 12 NA intron (FBgn0037292, intron 1 of 3) protein_coding-intron (FBgn0037292, intron 1 of 3) -10822 FBgn0263343 FBgn0263343 FBtr0308777 CR43424 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10362 chr3R 11601821 11602014 + 12 NA exon (FBgn0038358, exon 3 of 5) protein_coding-exon (FBgn0038358, exon 3 of 5) 1820 FBgn0038358 FBgn0038358 FBtr0083170 CG4525 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_390 chr2L 2411819 2411961 + 12 NA exon (FBgn0031426, exon 2 of 4) protein_coding-exon (FBgn0031426, exon 2 of 4) 3404 FBgn0031426 FBgn0031426 FBtr0307079 CG18641 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12386 chr3R 25475717 25475771 + 12 NA intron (FBgn0015129, intron 2 of 4) protein_coding-intron (FBgn0015129, intron 2 of 4) 9962 FBgn0015129 FBgn0015129 FBtr0085468 DopR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9307 chr3R 3063495 3063669 + 12 NA exon (FBgn0037487, exon 6 of 6) protein_coding-exon (FBgn0037487, exon 6 of 6) -3900 FBgn0037488 FBgn0037488 FBtr0303218 CG14607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4582 chr2R 6572255 6572309 + 12 NA intron (FBgn0024836, intron 1 of 5) protein_coding-intron (FBgn0024836, intron 1 of 5) 11432 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2241 chr2L 15406346 15406484 + 12 NA Intergenic Intergenic 19170 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5801 chr2R 17053263 17053329 + 12 NA exon (FBgn0034598, exon 5 of 9) protein_coding-exon (FBgn0034598, exon 5 of 9) 2867 FBgn0034598 FBgn0034598 FBtr0310422 CG4266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8689 chr3L 22296865 22296919 + 12 NA exon (FBgn0004449, exon 5 of 9) protein_coding-exon (FBgn0004449, exon 5 of 9) 15127 FBgn0027086 FBgn0027086 FBtr0078500 Aats-ile protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10406 chr3R 11910974 11911150 + 12 NA promoter-TSS (FBgn0038398) protein_coding-promoter-TSS (FBgn0038398) -165 FBgn0038398 FBgn0038398 FBtr0083225 sxe2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_660 chr2L 4519986 4520122 + 12 NA exon (FBgn0053196, exon 37 of 47) protein_coding-exon (FBgn0053196, exon 37 of 47) -43030 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2214 chr2L 15285289 15285447 + 12 NA exon (FBgn0028853, exon 1 of 1) protein_coding-exon (FBgn0028853, exon 1 of 1) 356 FBgn0028853 FBgn0028853 FBtr0080729 CG15263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8146 chr3L 15448701 15448755 + 12 NA Intergenic Intergenic 18427 FBgn0263616 FBgn0263616 FBtr0309981 CR43625 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8153 chr3L 15539968 15540097 + 12 NA intron (FBgn0004396, intron 1 of 5) protein_coding-intron (FBgn0004396, intron 1 of 5) -9891 FBgn0087035 FBgn0087035 FBtr0331933 AGO2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3522 chr2L 21923723 21923938 + 12 NA Intergenic Intergenic 7469 FBgn0032968 FBgn0032968 FBtr0085930 CG11634 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12701 chr3R 27195615 27195694 + 12 NA intron (FBgn0085376, intron 16 of 16) protein_coding-intron (FBgn0085376, intron 16 of 16) -2495 FBgn0046332 FBgn0046332 FBtr0085784 gskt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5112 chr2R 10825658 10825756 + 12 NA exon (FBgn0033984, exon 5 of 6) protein_coding-exon (FBgn0033984, exon 5 of 6) 2525 FBgn0033984 FBgn0033984 FBtr0303759 Lap1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10364 chr3R 11608557 11608678 + 12 NA Intergenic Intergenic 3090 FBgn0038359 FBgn0038359 FBtr0083171 CG5614 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_217 chr2L 1351922 1352088 + 12 NA TTS (FBgn0031333) protein_coding-TTS (FBgn0031333) 864 FBgn0031332 FBgn0031332 FBtr0077948 CG5556 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8233 chr3L 16261806 16261978 + 12 NA promoter-TSS (FBgn0036588) protein_coding-promoter-TSS (FBgn0036588) -600 FBgn0036588 FBgn0036588 FBtr0075464 CG13068 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11652 chr3R 22350001 22350138 + 12 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 10870 FBgn0039431 FBgn0039431 FBtr0302210 CG6490 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1285 chr2L 8931736 8931904 + 12 NA exon (FBgn0085427, exon 11 of 11) protein_coding-exon (FBgn0085427, exon 11 of 11) -2243 FBgn0032074 FBgn0032074 FBtr0300289 Tsp29Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6580 chr2RHet 1968907 1969035 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7816 chr3L 12663289 12663413 + 12 NA Intergenic Intergenic -17161 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1649 chr2L 12447257 12447343 + 12 NA exon (FBgn0032434, exon 4 of 5) protein_coding-exon (FBgn0032434, exon 4 of 5) 832 FBgn0032434 FBgn0032434 FBtr0080383 CG5421 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6404 chr2RHet 727827 727906 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7720 chr3L 11971248 11971419 + 12 NA exon (FBgn0264488, exon 3 of 10) protein_coding-exon (FBgn0264488, exon 3 of 10) 2122 FBgn0264488 FBgn0264488 FBtr0332816 CG43896 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6928 chr3L 2432770 2432824 + 12 NA intron (FBgn0261551, intron 1 of 9) protein_coding-intron (FBgn0261551, intron 2 of 9) 14842 FBgn0261551 FBgn0261551 FBtr0302675 CG42669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3684 chr2L 22319877 22320105 + 12 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -20631 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3461 chr2L 21776667 21776812 + 12 NA intron (FBgn0051612, intron 1 of 3) protein_coding-intron (FBgn0051612, intron 1 of 3) 7326 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5326 chr2R 12625965 12626129 + 12 NA promoter-TSS (FBgn0262564) protein_coding-promoter-TSS (FBgn0262564) -692 FBgn0262564 FBgn0262564 FBtr0304892 CG43104 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8401 chr3L 17577902 17578157 + 12 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -18767 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_9604 chr3R 5365792 5366105 + 12 NA exon (FBgn0037705, exon 6 of 9) protein_coding-exon (FBgn0037705, exon 6 of 9) -7214 FBgn0000244 FBgn0000244 FBtr0301093 by protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6197 chr2R 20270973 20271047 + 12 NA exon (FBgn0000037, exon 3 of 5) protein_coding-exon (FBgn0000037, exon 3 of 5) 5656 FBgn0035000 FBgn0035000 FBtr0072289 CG13578 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9512 chr3R 4614114 4614249 + 12 NA intron (FBgn0046874, intron 5 of 14) protein_coding-intron (FBgn0046874, intron 2 of 11) -4203 FBgn0261015 FBgn0261015 FBtr0332502 Pif1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8380 chr3L 17350123 17350291 + 12 NA exon (FBgn0036714, exon 6 of 6) protein_coding-exon (FBgn0036714, exon 6 of 6) -2575 FBgn0015550 FBgn0015550 FBtr0075216 tap protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6153 chr2R 19983067 19983218 + 12 NA exon (FBgn0023081, exon 4 of 11) protein_coding-exon (FBgn0023081, exon 4 of 11) 3015 FBgn0023081 FBgn0023081 FBtr0072287 gek protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5228 chr2R 11799388 11799495 + 12 NA intron (FBgn0264089, intron 1 of 20) protein_coding-intron (FBgn0264089, intron 1 of 19) 10182 FBgn0264089 FBgn0264089 FBtr0330733 sli protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3109 chr2L 19848332 19848516 + 12 NA intron (FBgn0263873, intron 1 of 14) protein_coding-intron (FBgn0263873, intron 2 of 15) -7677 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10343 chr3R 11532696 11532884 + 12 NA exon (FBgn0038354, exon 5 of 5) protein_coding-exon (FBgn0038354, exon 5 of 5) 2373 FBgn0038354 FBgn0038354 FBtr0083165 CG5404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4909 chr2R 9144756 9144836 + 12 NA promoter-TSS (FBgn0033821) protein_coding-promoter-TSS (FBgn0033821) -595 FBgn0033821 FBgn0033821 FBtr0087748 CG10799 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7905 chr3L 13393250 13393361 + 12 NA exon (FBgn0002573, exon 2 of 4) protein_coding-exon (FBgn0002573, exon 2 of 4) 920 FBgn0002573 FBgn0002573 FBtr0075862 sens protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7886 chr3L 13250770 13250991 + 12 NA intron (FBgn0023095, intron 3 of 3) protein_coding-intron (FBgn0023095, intron 3 of 4) 8233 FBgn0011844 FBgn0011844 FBtr0075834 tRNA:D2:69F tRNA Nup98-S2-pascual-garcia2017_R1_peak_2272 chr2L 15494202 15494317 + 12 NA Intergenic Intergenic -4851 FBgn0002524 FBgn0002524 FBtr0080738 lace protein_coding Nup98-S2-pascual-garcia2017_R1_peak_575 chr2L 3983498 3983614 + 12 NA intron (FBgn0051774, intron 2 of 9) protein_coding-intron (FBgn0051774, intron 2 of 8) 8157 FBgn0051774 FBgn0051774 FBtr0308126 fred protein_coding Nup98-S2-pascual-garcia2017_R1_peak_136 chr2L 987801 987906 + 12 NA Intergenic Intergenic 39037 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7610 chr3L 10748890 10749018 + 12 NA Intergenic Intergenic -16138 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_918 chr2L 6771871 6771951 + 12 NA promoter-TSS (FBgn0031857) protein_coding-promoter-TSS (FBgn0031857) 698 FBgn0031857 FBgn0031857 FBtr0301972 CG11321 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9215 chr3R 2557434 2557620 + 12 NA intron (FBgn0051481, intron 2 of 8) protein_coding-intron (FBgn0051481, intron 2 of 8) 10258 FBgn0051481 FBgn0051481 FBtr0089279 pb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_415 chr2L 2627887 2627989 + 12 NA Intergenic Intergenic 7751 FBgn0263322 FBgn0263322 FBtr0308746 CG43403 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11742 chr3R 22766212 22766314 + 12 NA intron (FBgn0015541, intron 6 of 12) protein_coding-intron (FBgn0015541, intron 5 of 11) -4993 FBgn0039462 FBgn0039462 FBtr0085067 CG14252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4158 chr2R 3317179 3317346 + 12 NA intron (FBgn0003460, intron 6 of 6) protein_coding-intron (FBgn0003460, intron 6 of 6) -1164 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8007 chr3L 14109354 14109434 + 12 NA exon (FBgn0042630, exon 6 of 7) protein_coding-exon (FBgn0042630, exon 6 of 7) -8176 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9292 chr3R 2965070 2965300 + 12 NA intron (FBgn0037475, intron 4 of 4) protein_coding-intron (FBgn0037475, intron 4 of 4) 3255 FBgn0037475 FBgn0037475 FBtr0081567 Fer1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12260 chr3R 24919653 24919794 + 12 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 18819 FBgn0039634 FBgn0039634 FBtr0085416 CG11874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8085 chr3L 14831525 14831684 + 12 NA intron (FBgn0036454, intron 2 of 7) protein_coding-intron (FBgn0036454, intron 2 of 18) 33252 FBgn0036454 FBgn0036454 FBtr0110825 CG17839 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9735 chr3R 6566939 6567020 + 12 NA exon (FBgn0004841, exon 4 of 8) protein_coding-exon (FBgn0004841, exon 4 of 8) -5300 FBgn0037828 FBgn0037828 FBtr0082316 tomboy20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11410 chr3R 20068925 20069088 + 12 NA exon (FBgn0043884, exon 15 of 17) protein_coding-exon (FBgn0043884, exon 15 of 17) 6126 FBgn0261452 FBgn0261452 FBtr0309753 scaRNA:mgU2-25 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_5272 chr2R 12277417 12277539 + 12 NA intron (FBgn0264273, intron 1 of 15) protein_coding-intron (FBgn0264273, intron 1 of 15) 3449 FBgn0264273 FBgn0264273 FBtr0100001 Sema-2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2864 chr2L 18235212 18235382 + 12 NA intron (FBgn0261804, intron 3 of 14) protein_coding-intron (FBgn0261804, intron 3 of 14) -16110 FBgn0263325 FBgn0263325 FBtr0308756 CG43406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2651 chr2L 17273067 17273158 + 12 NA Intergenic Intergenic -12380 FBgn0032629 FBgn0032629 FBtr0080972 beat-IIIc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4981 chr2R 9656311 9656473 + 12 NA Intergenic Intergenic -1028 FBgn0033867 FBgn0033867 FBtr0087629 Cpr50Ca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11266 chr3R 17666628 17666832 + 12 NA Intergenic Intergenic 2757 FBgn0045470 FBgn0045470 FBtr0290236 Gr93b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4273 chr2R 4358028 4358166 + 12 NA exon (FBgn0033296, exon 1 of 3) protein_coding-exon (FBgn0033296, exon 1 of 3) 1057 FBgn0033296 FBgn0033296 FBtr0088757 Mal-A7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_840 chr2L 5942270 5942463 + 12 NA TTS (FBgn0261055) protein_coding-TTS (FBgn0261055) 897 FBgn0261055 FBgn0261055 FBtr0301935 Sfp26Ad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10003 chr3R 8766881 8767039 + 12 NA Intergenic Intergenic -20514 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7718 chr3L 11950186 11950245 + 12 NA TTS (FBgn0036229) protein_coding-TTS (FBgn0036229) 650 FBgn0036230 FBgn0036230 FBtr0076065 CG11570 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10508 chr3R 12499328 12499463 + 12 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) -17906 FBgn0051217 FBgn0051217 FBtr0083353 modSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8001 chr3L 14097511 14097732 + 12 NA exon (FBgn0036411, exon 3 of 3) protein_coding-exon (FBgn0036411, exon 3 of 3) 3597 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9390 chr3R 3686962 3687034 + 12 NA exon (FBgn0037525, exon 13 of 15) protein_coding-exon (FBgn0037525, exon 13 of 15) 25457 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5358 chr2R 13108439 13108617 + 12 NA intron (FBgn0261642, intron 2 of 9) protein_coding-intron (FBgn0261642, intron 2 of 9) 15815 FBgn0262882 FBgn0262882 FBtr0306290 CG43237 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9825 chr3R 7310725 7310810 + 12 NA Intergenic Intergenic -16025 FBgn0037908 FBgn0037908 FBtr0082395 dpr5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2877 chr2L 18300081 18300188 + 12 NA Intergenic Intergenic 5230 FBgn0032677 FBgn0032677 FBtr0081050 CG5790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2170 chr2L 15132877 15132982 + 12 NA promoter-TSS (FBgn0028889) tRNA-promoter-TSS (FBgn0028889) -540 FBgn0028889 FBgn0028889 FBtr0080717 tRNA:L:35C tRNA Nup98-S2-pascual-garcia2017_R1_peak_7869 chr3L 13094700 13094779 + 12 NA Intergenic Intergenic -11670 FBgn0036346 FBgn0036346 FBtr0075891 CG11251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_272 chr2L 1472012 1472109 + 12 NA Intergenic Intergenic -20235 FBgn0051928 FBgn0051928 FBtr0077929 CG31928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9161 chr3R 2156104 2156290 + 12 NA exon (FBgn0037428, exon 1 of 2) protein_coding-exon (FBgn0037428, exon 1 of 2) 225 FBgn0037428 FBgn0037428 FBtr0078611 Osi18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10962 chr3R 15552470 15552616 + 12 NA Intergenic Intergenic -4138 FBgn0024963 FBgn0024963 FBtr0301378 GluClalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8942 chr3R 80739 80836 + 12 NA exon (FBgn0037227, exon 2 of 2) protein_coding-exon (FBgn0037227, exon 2 of 2) 285 FBgn0037227 FBgn0037227 FBtr0078976 TwdlV protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2212 chr2L 15282543 15282718 + 12 NA Intergenic Intergenic -2382 FBgn0028853 FBgn0028853 FBtr0080729 CG15263 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8535 chr3L 18952435 18952489 + 12 NA Intergenic Intergenic 8733 FBgn0036834 FBgn0036834 FBtr0075023 CG6836 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4726 chr2R 7703349 7703526 + 12 NA Intergenic Intergenic -9433 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2321 chr2L 15639951 15640005 + 12 NA Intergenic Intergenic 9894 FBgn0028518 FBgn0028518 FBtr0080755 CG18480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9393 chr3R 3699733 3699787 + 12 NA intron (FBgn0037525, intron 2 of 14) protein_coding-intron (FBgn0037525, intron 2 of 14) 12695 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12897 chr3RHet 2101820 2101899 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6981 chr3L 3205681 3205877 + 12 NA promoter-TSS (FBgn0052277) protein_coding-promoter-TSS (FBgn0052277) -330 FBgn0052277 FBgn0052277 FBtr0073103 CG32277 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2051 chr2L 14651908 14652101 + 12 NA intron (FBgn0003016, intron 1 of 11) protein_coding-intron (FBgn0003016, intron 1 of 10) 35735 FBgn0000056 FBgn0000056 FBtr0100187 Adhr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6879 chr3L 1928055 1928241 + 12 NA intron (FBgn0261723, intron 4 of 4) protein_coding-intron (FBgn0261723, intron 4 of 4) 2507 FBgn0052312 FBgn0052312 FBtr0072840 tRNA:CR32312 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12952 chr4 626638 626692 + 12 NA exon (FBgn0028996, exon 1 of 4) protein_coding-exon (FBgn0028996, exon 1 of 4) 1686 FBgn0028996 FBgn0028996 FBtr0089104 onecut protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12602 chr3R 26810125 26810253 + 12 NA intron (FBgn0004573, intron 1 of 1) protein_coding-intron (FBgn0004573, intron 1 of 1) 5539 FBgn0051008 FBgn0051008 FBtr0085748 CG31008 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9017 chr3R 936730 937075 + 12 NA Intergenic Intergenic -2002 FBgn0262605 FBgn0262605 FBtr0305279 CG43131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3186 chr2L 20322085 20322196 + 12 NA intron (FBgn0003475, intron 2 of 7) protein_coding-intron (FBgn0003475, intron 2 of 16) -4517 FBgn0263581 FBgn0263581 FBtr0309806 CR43606 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2328 chr2L 15728843 15728955 + 12 NA exon (FBgn0010382, exon 6 of 6) protein_coding-exon (FBgn0010382, exon 6 of 6) 17710 FBgn0010382 FBgn0010382 FBtr0080777 CycE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7080 chr3L 5325337 5325443 + 12 NA Intergenic Intergenic -9794 FBgn0011986 FBgn0011986 FBtr0077142 tRNA:S7:64D tRNA Nup98-S2-pascual-garcia2017_R1_peak_850 chr2L 6116616 6116708 + 12 NA intron (FBgn0051641, intron 4 of 8) protein_coding-intron (FBgn0051641, intron 2 of 6) -1850 FBgn0051642 FBgn0051642 FBtr0079199 CG31642 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3582 chr2L 22031331 22031518 + 12 NA Intergenic Intergenic -6436 FBgn0084001 FBgn0084001 FBtr0332199 CG41434 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_309 chr2L 1600629 1600737 + 12 NA exon (FBgn0261509, exon 3 of 11) protein_coding-exon (FBgn0261509, exon 3 of 11) 10442 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12683 chr3R 27151558 27151617 + 12 NA intron (FBgn0085376, intron 1 of 7) protein_coding-intron (FBgn0085376, intron 1 of 16) 14691 FBgn0085376 FBgn0085376 FBtr0301051 CG34347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1909 chr2L 14280834 14281041 + 12 NA intron (FBgn0261563, intron 2 of 12) protein_coding-intron (FBgn0261563, intron 2 of 15) 6142 FBgn0052971 FBgn0052971 FBtr0080621 CG32971 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11227 chr3R 17466061 17466189 + 12 NA intron (FBgn0011766, intron 2 of 7) protein_coding-intron (FBgn0011766, intron 2 of 7) -7381 FBgn0011766 FBgn0011766 FBtr0084119 E2f protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4826 chr2R 8421709 8421850 + 12 NA intron (FBgn0011592, intron 1 of 9) protein_coding-intron (FBgn0011592, intron 1 of 9) 5218 FBgn0011592 FBgn0011592 FBtr0087822 fra protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9105 chr3R 1730266 1730416 + 12 NA intron (FBgn0083949, intron 1 of 16) protein_coding-intron (FBgn0083949, intron 1 of 16) 34904 FBgn0083949 FBgn0083949 FBtr0110807 CG34113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2748 chr2L 17788394 17788546 + 12 NA exon (FBgn0262018, exon 14 of 14) protein_coding-exon (FBgn0262018, exon 14 of 14) -3942 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7279 chr3L 7060726 7060817 + 12 NA TTS (FBgn0052391) protein_coding-TTS (FBgn0052391) 1357 FBgn0035734 FBgn0035734 FBtr0076908 CG14823 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12209 chr3R 24610631 24610795 + 12 NA Intergenic Intergenic -4626 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7391 chr3L 8324775 8324945 + 12 NA Intergenic Intergenic 3177 FBgn0085491 FBgn0085491 FBtr0112768 CG34462 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6847 chr3L 1586544 1586617 + 12 NA intron (FBgn0035237, intron 1 of 4) protein_coding-intron (FBgn0035237, intron 1 of 4) 9881 FBgn0035237 FBgn0035237 FBtr0303993 CG13917 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12436 chr3R 25545060 25545117 + 12 NA intron (FBgn0039686, intron 1 of 2) protein_coding-intron (FBgn0039686, intron 1 of 2) -1563 FBgn0039686 FBgn0039686 FBtr0085457 CG15506 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10303 chr3R 11280106 11280288 + 12 NA intron (FBgn0038341, intron 1 of 16) protein_coding-intron (FBgn0038341, intron 1 of 16) 14487 FBgn0000047 FBgn0000047 FBtr0083143 Act88F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9087 chr3R 1598356 1598446 + 12 NA promoter-TSS (FBgn0027608) protein_coding-promoter-TSS (FBgn0027608) -6630 FBgn0037374 FBgn0037374 FBtr0078625 jagn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8657 chr3L 21697559 21697729 + 12 NA intron (FBgn0052447, intron 1 of 2) protein_coding-intron (FBgn0052447, intron 1 of 2) 1821 FBgn0052447 FBgn0052447 FBtr0078461 CG32447 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9891 chr3R 7976282 7976483 + 12 NA exon (FBgn0037993, exon 3 of 7) protein_coding-exon (FBgn0037993, exon 3 of 7) 7935 FBgn0037993 FBgn0037993 FBtr0082549 dpr15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6204 chr2R 20319823 20319931 + 12 NA exon (FBgn0035004, exon 1 of 1) protein_coding-exon (FBgn0035004, exon 1 of 1) 379 FBgn0035004 FBgn0035004 FBtr0072356 Pgam5-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11876 chr3R 23341759 23341964 + 12 NA exon (FBgn0039522, exon 1 of 1) protein_coding-exon (FBgn0039522, exon 1 of 1) 1118 FBgn0039522 FBgn0039522 FBtr0085212 CG13972 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8493 chr3L 18214315 18214369 + 12 NA Intergenic Intergenic 19748 FBgn0036782 FBgn0036782 FBtr0310156 CG7320 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10922 chr3R 15328408 15328506 + 12 NA intron (FBgn0260003, intron 15 of 32) protein_coding-intron (FBgn0260003, intron 16 of 34) -11620 FBgn0038709 FBgn0038709 FBtr0083768 CG15025 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6893 chr3L 2095713 2095833 + 12 NA exon (FBgn0086906, exon 7 of 14) protein_coding-exon (FBgn0086906, exon 7 of 14) 7607 FBgn0262107 FBgn0262107 FBtr0304033 CR42860 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11814 chr3R 23158855 23159019 + 12 NA Intergenic Intergenic -2333 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6653 chr2RHet 2354864 2355008 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13548 chrX 5603048 5603231 + 12 NA TTS (FBgn0029791) protein_coding-TTS (FBgn0029791) 4421 FBgn0053080 FBgn0053080 FBtr0070845 CG33080 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10790 chr3R 14338008 14338151 + 12 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) 33229 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7089 chr3L 5366047 5366101 + 12 NA Intergenic Intergenic -4966 FBgn0035603 FBgn0035603 FBtr0077154 CG10635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3497 chr2L 21863705 21863846 + 12 NA Intergenic Intergenic -30452 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5609 chr2R 15481030 15481181 + 12 NA promoter-TSS (FBgn0034459) protein_coding-promoter-TSS (FBgn0034459) -190 FBgn0034459 FBgn0034459 FBtr0300829 CG16716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11242 chr3R 17557211 17557344 + 12 NA Intergenic Intergenic -1660 FBgn0262542 FBgn0262542 FBtr0304882 CR43096 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7736 chr3L 12156989 12157158 + 12 NA promoter-TSS (FBgn0036259) protein_coding-promoter-TSS (FBgn0036259) -238 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2617 chr2L 17139995 17140079 + 12 NA intron (FBgn0032627, intron 1 of 5) protein_coding-intron (FBgn0032627, intron 1 of 5) 6419 FBgn0032627 FBgn0032627 FBtr0303301 beat-IIIa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10982 chr3R 15645914 15646055 + 12 NA intron (FBgn0014135, intron 2 of 4) protein_coding-intron (FBgn0014135, intron 2 of 4) 16555 FBgn0014135 FBgn0014135 FBtr0300123 bnl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11549 chr3R 21912273 21912479 + 12 NA intron (FBgn0039411, intron 3 of 10) protein_coding-intron (FBgn0039411, intron 3 of 10) 12057 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2396 chr2L 16039409 16039528 + 12 NA exon (FBgn0028644, exon 8 of 8) protein_coding-exon (FBgn0028644, exon 8 of 8) -5084 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4727 chr2R 7704268 7704497 + 12 NA Intergenic Intergenic -8488 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6915 chr3L 2277526 2277688 + 12 NA exon (FBgn0035328, exon 2 of 2) protein_coding-exon (FBgn0035328, exon 2 of 2) 1057 FBgn0035328 FBgn0035328 FBtr0072883 yellow-g2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9613 chr3R 5560747 5561014 + 12 NA exon (FBgn0037736, exon 16 of 16) protein_coding-exon (FBgn0037736, exon 16 of 16) -1893 FBgn0003886 FBgn0003886 FBtr0082087 alphaTub85E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1563 chr2L 11721623 11721761 + 12 NA Intergenic Intergenic -17260 FBgn0032373 FBgn0032373 FBtr0080255 Vha100-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8894 chr3LHet 1270872 1271119 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10472 chr3R 12284889 12284983 + 12 NA TTS (FBgn0038432) protein_coding-TTS (FBgn0038432) 3162 FBgn0038432 FBgn0038432 FBtr0083291 CG14883 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8472 chr3L 18070989 18071105 + 12 NA Intergenic Intergenic -4565 FBgn0085281 FBgn0085281 FBtr0112446 CG34252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12392 chr3R 25492601 25492814 + 12 NA TTS (FBgn0039675) protein_coding-TTS (FBgn0039675) 1892 FBgn0039676 FBgn0039676 FBtr0332443 ppk20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_243 chr2L 1403703 1403826 + 12 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 16685 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7780 chr3L 12431674 12431767 + 12 NA Intergenic Intergenic -5952 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10629 chr3R 13311584 13311711 + 12 NA intron (FBgn0261046, intron 13 of 34) protein_coding-intron (FBgn0261046, intron 14 of 34) 19742 FBgn0261046 FBgn0261046 FBtr0113398 Dscam3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12812 chr3R 27832028 27832203 + 12 NA Intergenic Intergenic 19544 FBgn0039886 FBgn0039886 FBtr0085871 CG2003 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6401 chr2RHet 707674 707842 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3792 chr2L 22645804 22645912 + 12 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) -1331 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2589 chr2L 17052065 17052136 + 12 NA Intergenic Intergenic -3819 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9886 chr3R 7938100 7938207 + 12 NA Intergenic Intergenic 14345 FBgn0051361 FBgn0051361 FBtr0082543 dpr17 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9324 chr3R 3133707 3134028 + 12 NA exon (FBgn0259172, exon 2 of 9) protein_coding-exon (FBgn0259172, exon 2 of 9) 1252 FBgn0259172 FBgn0259172 FBtr0299637 rn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12667 chr3R 27060888 27060942 + 12 NA promoter-TSS (FBgn0039833) protein_coding-promoter-TSS (FBgn0039833) 88 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_313 chr2L 1603471 1603565 + 12 NA exon (FBgn0261509, exon 6 of 11) protein_coding-exon (FBgn0261509, exon 6 of 11) 7607 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8222 chr3L 16213791 16213940 + 12 NA Intergenic Intergenic -1266 FBgn0052153 FBgn0052153 FBtr0075456 tRNA:CR32153 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4162 chr2R 3320356 3320469 + 12 NA intron (FBgn0003460, intron 6 of 6) protein_coding-intron (FBgn0003460, intron 6 of 6) -4314 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7135 chr3L 6008346 6008421 + 12 NA intron (FBgn0052406, intron 1 of 6) protein_coding-intron (FBgn0052406, intron 1 of 6) -4262 FBgn0035657 FBgn0035657 FBtr0077069 alphaKap4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9012 chr3R 903326 903380 + 12 NA TTS (FBgn0010313) protein_coding-TTS (FBgn0010313) 9396 FBgn0010313 FBgn0010313 FBtr0078844 corto protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3003 chr2L 19289275 19289398 + 12 NA Intergenic Intergenic 10515 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3841 chr2L 22898257 22898400 + 12 NA exon (FBgn0250907, exon 6 of 9) protein_coding-exon (FBgn0250907, exon 6 of 9) 20232 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4594 chr2R 6640965 6641075 + 12 NA intron (FBgn0053144, intron 4 of 7) protein_coding-intron (FBgn0053144, intron 4 of 7) -7263 FBgn0263802 FBgn0263802 FBtr0309816 CR43605 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12986 chr4 943766 943865 + 12 NA intron (FBgn0023213, intron 7 of 15) protein_coding-intron (FBgn0023213, intron 7 of 15) 7532 FBgn0023213 FBgn0023213 FBtr0289951 eIF4G protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2113 chr2L 14908676 14909142 + 12 NA exon (FBgn0259213, exon 20 of 20) protein_coding-exon (FBgn0259213, exon 20 of 20) -15826 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8621 chr3L 20852793 20852928 + 12 NA exon (FBgn0052432, exon 3 of 20) protein_coding-exon (FBgn0052432, exon 3 of 20) 17773 FBgn0037031 FBgn0037031 FBtr0333371 CG11456 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3179 chr2L 20270346 20270410 + 12 NA Intergenic Intergenic -6079 FBgn0260000 FBgn0260000 FBtr0081375 CG17570 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8268 chr3L 16491126 16491206 + 12 NA exon (FBgn0003515, exon 1 of 7) protein_coding-exon (FBgn0003515, exon 1 of 7) 415 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3707 chr2L 22359748 22359981 + 12 NA intron (FBgn0039972, intron 3 of 8) protein_coding-intron (FBgn0039972, intron 1 of 6) 5509 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4686 chr2R 7428857 7428972 + 12 NA Intergenic Intergenic -13526 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4537 chr2R 6225871 6226202 + 12 NA intron (FBgn0261698, intron 9 of 27) protein_coding-intron (FBgn0261698, intron 9 of 28) 13630 FBgn0262836 FBgn0262836 FBtr0306077 CG43200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4208 chr2R 3889020 3889126 + 12 NA exon (FBgn0033249, exon 2 of 2) protein_coding-exon (FBgn0033249, exon 2 of 2) 552 FBgn0033249 FBgn0033249 FBtr0088868 CG11191 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12255 chr3R 24897410 24897564 + 12 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 7937 FBgn0039633 FBgn0039633 FBtr0330300 CG11873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5620 chr2R 15524045 15524381 + 12 NA promoter-TSS (FBgn0034460) protein_coding-promoter-TSS (FBgn0034460) 48 FBgn0034460 FBgn0034460 FBtr0086469 CG18367 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12549 chr3R 26585280 26585388 + 12 NA Intergenic Intergenic -6314 FBgn0004606 FBgn0004606 FBtr0085702 zfh1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1841 chr2L 13802308 13802426 + 12 NA Intergenic Intergenic -1259 FBgn0027844 FBgn0027844 FBtr0080539 CAH1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3310 chr2L 20857540 20857652 + 12 NA TTS (FBgn0032895) protein_coding-TTS (FBgn0032895) 295 FBgn0032896 FBgn0032896 FBtr0081449 CG14400 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_66 chr2L 744275 744348 + 12 NA promoter-TSS (FBgn0026438) protein_coding-promoter-TSS (FBgn0026438) 84 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13536 chrX 4853700 4853760 + 12 NA TTS (FBgn0061196) protein_coding-TTS (FBgn0061196) 1303 FBgn0061196 FBgn0061196 FBtr0070727 SIP3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5800 chr2R 17009616 17009791 + 12 NA exon (FBgn0015721, exon 3 of 6) protein_coding-exon (FBgn0015721, exon 3 of 6) 3804 FBgn0034588 FBgn0034588 FBtr0071567 CG9394 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6263 chr2R 20843728 20843878 + 12 NA Intergenic Intergenic 7633 FBgn0035086 FBgn0035086 FBtr0300763 CG12851 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13502 chrX 3058079 3058133 + 12 NA exon (FBgn0004647, exon 6 of 9) protein_coding-exon (FBgn0004647, exon 6 of 9) 9067 FBgn0028746 FBgn0028746 FBtr0070543 CG18508 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5767 chr2R 16737932 16738002 + 12 NA promoter-TSS (FBgn0034552) protein_coding-promoter-TSS (FBgn0034552) -543 FBgn0034552 FBgn0034552 FBtr0071561 CG17999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1782 chr2L 13305288 13305342 + 12 NA promoter-TSS (FBgn0032503) protein_coding-promoter-TSS (FBgn0032503) 527 FBgn0032503 FBgn0032503 FBtr0080463 CG16825 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10233 chr3R 10685349 10685490 + 12 NA exon (FBgn0038267, exon 1 of 1) protein_coding-exon (FBgn0038267, exon 1 of 1) 141 FBgn0038267 FBgn0038267 FBtr0083012 CG17304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2189 chr2L 15194468 15194522 + 12 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 5914 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8067 chr3L 14589060 14589164 + 12 NA exon (FBgn0040318, exon 2 of 4) protein_coding-exon (FBgn0040318, exon 2 of 4) 3528 FBgn0040318 FBgn0040318 FBtr0075720 HGTX protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11866 chr3R 23317683 23317754 + 12 NA Intergenic Intergenic 4069 FBgn0039520 FBgn0039520 FBtr0085184 Gr98a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11842 chr3R 23234322 23234409 + 12 NA intron (FBgn0016061, intron 2 of 16) protein_coding-intron (FBgn0016061, intron 2 of 16) 28839 FBgn0016061 FBgn0016061 FBtr0289998 side protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2937 chr2L 18825112 18825277 + 12 NA intron (FBgn0032713, intron 3 of 4) protein_coding-intron (FBgn0032713, intron 3 of 4) -1576 FBgn0027070 FBgn0027070 FBtr0081108 CG17322 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_809 chr2L 5735966 5736038 + 12 NA exon (FBgn0031734, exon 6 of 11) protein_coding-exon (FBgn0031734, exon 6 of 11) 4952 FBgn0031734 FBgn0031734 FBtr0079166 CG11147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10674 chr3R 13598244 13598475 + 12 NA intron (FBgn0262562, intron 8 of 16) protein_coding-intron (FBgn0262562, intron 8 of 16) -10156 FBgn0038542 FBgn0038542 FBtr0083532 TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1864 chr2L 13999764 13999873 + 12 NA intron (FBgn0003255, intron 1 of 14) protein_coding-intron (FBgn0003255, intron 1 of 14) -8309 FBgn0261582 FBgn0261582 FBtr0302893 CG42692 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8702 chr3L 22454128 22454278 + 12 NA promoter-TSS (FBgn0037163) protein_coding-promoter-TSS (FBgn0037163) 28 FBgn0037163 FBgn0037163 FBtr0078508 laza protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2564 chr2L 16984245 16984399 + 12 NA promoter-TSS (FBgn0051806) protein_coding-promoter-TSS (FBgn0051806) -656 FBgn0051806 FBgn0051806 FBtr0080952 CG31806 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2554 chr2L 16951820 16951947 + 12 NA Intergenic Intergenic -6509 FBgn0262355 FBgn0262355 FBtr0304633 CG43053 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12719 chr3R 27304658 27304761 + 12 NA Intergenic Intergenic 15642 FBgn0039850 FBgn0039850 FBtr0085789 CG11333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3250 chr2L 20573773 20573920 + 12 NA Intergenic Intergenic 11422 FBgn0263533 FBgn0263533 FBtr0309625 mir-4973 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2897 chr2L 18476180 18476248 + 12 NA exon (FBgn0032681, exon 5 of 9) protein_coding-exon (FBgn0032681, exon 5 of 9) 3871 FBgn0262456 FBgn0262456 FBtr0304492 mir-125 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6950 chr3L 2796334 2796610 + 12 NA exon (FBgn0263392, exon 5 of 10) protein_coding-exon (FBgn0263392, exon 5 of 10) 14217 FBgn0035375 FBgn0035375 FBtr0333442 pgant6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2505 chr2L 16673175 16673602 + 12 NA intron (FBgn0032593, intron 2 of 17) protein_coding-intron (FBgn0032593, intron 2 of 17) 3278 FBgn0032593 FBgn0032593 FBtr0080946 trpgamma protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7669 chr3L 11596726 11596992 + 12 NA exon (FBgn0036179, exon 4 of 4) protein_coding-exon (FBgn0036179, exon 4 of 4) 2328 FBgn0036179 FBgn0036179 FBtr0307115 CG7368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_994 chr2L 7378522 7378640 + 12 NA exon (FBgn0002938, exon 2 of 14) protein_coding-exon (FBgn0002938, exon 2 of 14) 845 FBgn0002938 FBgn0002938 FBtr0079437 ninaC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11938 chr3R 23629460 23629534 + 12 NA intron (FBgn0085382, intron 4 of 11) protein_coding-intron (FBgn0085382, intron 4 of 11) -41314 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6060 chr2R 19062148 19062303 + 12 NA intron (FBgn0085400, intron 3 of 13) protein_coding-intron (FBgn0085400, intron 3 of 13) -9706 FBgn0034833 FBgn0034833 FBtr0071998 CG13539 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11836 chr3R 23216649 23216740 + 12 NA exon (FBgn0016061, exon 11 of 17) protein_coding-exon (FBgn0016061, exon 11 of 17) -21107 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2141 chr2L 14983968 14984076 + 12 NA exon (FBgn0086711, exon 5 of 8) protein_coding-exon (FBgn0086711, exon 5 of 8) -11722 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11295 chr3R 18102136 18102252 + 12 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -16454 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7128 chr3L 5969214 5969287 + 12 NA promoter-TSS (FBgn0035656) protein_coding-promoter-TSS (FBgn0035656) -143 FBgn0035656 FBgn0035656 FBtr0332041 CG10479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10938 chr3R 15423540 15423612 + 12 NA exon (FBgn0038714, exon 2 of 2) protein_coding-exon (FBgn0038714, exon 2 of 2) 1095 FBgn0038714 FBgn0038714 FBtr0083811 Cpr92A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4650 chr2R 7221471 7221607 + 12 NA exon (FBgn0003382, exon 9 of 9) protein_coding-exon (FBgn0003382, exon 9 of 9) -2806 FBgn0043470 FBgn0043470 FBtr0088121 lambdaTry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_866 chr2L 6283713 6283788 + 12 NA intron (FBgn0053531, intron 3 of 7) protein_coding-intron (FBgn0053531, intron 3 of 17) 12726 FBgn0261699 FBgn0261699 FBtr0333241 CR42735 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4426 chr2R 5383073 5383265 + 12 NA intron (FBgn0004360, intron 1 of 4) protein_coding-intron (FBgn0004360, intron 1 of 4) 1495 FBgn0004360 FBgn0004360 FBtr0088512 Wnt2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8444 chr3L 17831474 17831641 + 12 NA exon (FBgn0001134, exon 6 of 6) protein_coding-exon (FBgn0001134, exon 6 of 6) 2970 FBgn0036759 FBgn0036759 FBtr0075162 CG5577 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4471 chr2R 5683823 5683877 + 12 NA exon (FBgn0033443, exon 2 of 5) protein_coding-exon (FBgn0033443, exon 2 of 5) 3002 FBgn0033443 FBgn0033443 FBtr0088474 CG1698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5175 chr2R 11343937 11343991 + 12 NA exon (FBgn0263980, exon 13 of 15) protein_coding-exon (FBgn0263980, exon 13 of 15) 26374 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10279 chr3R 11207339 11207472 + 12 NA exon (FBgn0038334, exon 1 of 1) protein_coding-exon (FBgn0038334, exon 1 of 1) 1268 FBgn0038334 FBgn0038334 FBtr0083107 h-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12300 chr3R 25164744 25164886 + 12 NA Intergenic Intergenic -19479 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10825 chr3R 14509528 14509727 + 12 NA exon (FBgn0038641, exon 5 of 6) protein_coding-exon (FBgn0038641, exon 5 of 6) 2768 FBgn0038641 FBgn0038641 FBtr0083669 CG7708 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4329 chr2R 4722058 4722191 + 12 NA intron (FBgn0024189, intron 17 of 21) protein_coding-intron (FBgn0024189, intron 16 of 20) 8228 FBgn0050350 FBgn0050350 FBtr0088636 CG30350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5807 chr2R 17097994 17098145 + 12 NA TTS (FBgn0034603) protein_coding-TTS (FBgn0034603) 4408 FBgn0027073 FBgn0027073 FBtr0071625 CG4302 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11070 chr3R 16165320 16165438 + 12 NA intron (FBgn0038789, intron 2 of 7) protein_coding-intron (FBgn0038789, intron 2 of 7) 390 FBgn0038789 FBgn0038789 FBtr0113253 Ir92a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8236 chr3L 16263696 16263817 + 12 NA promoter-TSS (FBgn0036589) protein_coding-promoter-TSS (FBgn0036589) 246 FBgn0085277 FBgn0085277 FBtr0112442 CG34248 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11678 chr3R 22479950 22480004 + 12 NA intron (FBgn0250908, intron 7 of 8) protein_coding-intron (FBgn0250908, intron 7 of 8) -2191 FBgn0243586 FBgn0243586 FBtr0085036 Tb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6632 chr2RHet 2261836 2261931 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13026 chr4 1128624 1128808 + 12 NA intron (FBgn0005561, intron 5 of 7) protein_coding-intron (FBgn0005561, intron 8 of 12) 9703 FBgn0005561 FBgn0005561 FBtr0301563 sv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2455 chr2L 16360512 16360621 + 12 NA Intergenic Intergenic -3832 FBgn0025678 FBgn0025678 FBtr0080837 CaBP1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9077 chr3R 1533329 1533383 + 12 NA exon (FBgn0261261, exon 1 of 7) protein_coding-exon (FBgn0261261, exon 1 of 7) 4981 FBgn0261261 FBgn0261261 FBtr0302090 plx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6242 chr2R 20692885 20693034 + 12 NA Intergenic Intergenic -3912 FBgn0262098 FBgn0262098 FBtr0304016 CG42851 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9931 chr3R 8233984 8234062 + 12 NA promoter-TSS (FBgn0038039) protein_coding-promoter-TSS (FBgn0038039) -453 FBgn0038039 FBgn0038039 FBtr0082585 CG5196 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9990 chr3R 8697071 8697160 + 12 NA Intergenic Intergenic -12176 FBgn0038088 FBgn0038088 FBtr0082686 CG10126 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1734 chr2L 12899467 12899650 + 12 NA Intergenic Intergenic -12972 FBgn0040508 FBgn0040508 FBtr0100494 ACXC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9730 chr3R 6535779 6535987 + 12 NA promoter-TSS (FBgn0051373) protein_coding-promoter-TSS (FBgn0051373) -797 FBgn0051373 FBgn0051373 FBtr0082318 CG31373 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10830 chr3R 14555682 14555876 + 12 NA intron (FBgn0000303, intron 5 of 7) protein_coding-intron (FBgn0000303, intron 5 of 7) -1589 FBgn0038646 FBgn0038646 FBtr0083685 CG7715 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11524 chr3R 21805266 21805386 + 12 NA exon (FBgn0259146, exon 3 of 3) protein_coding-exon (FBgn0259146, exon 3 of 3) -3409 FBgn0015269 FBgn0015269 FBtr0084952 Nf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11743 chr3R 22767217 22767430 + 12 NA exon (FBgn0015541, exon 6 of 12) protein_coding-exon (FBgn0015541, exon 6 of 12) -3933 FBgn0039462 FBgn0039462 FBtr0085067 CG14252 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1414 chr2L 10070642 10070761 + 12 NA intron (FBgn0032180, intron 9 of 13) protein_coding-intron (FBgn0032180, intron 9 of 13) 9830 FBgn0032178 FBgn0032178 FBtr0079938 Spn31A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_130 chr2L 968486 968638 + 12 NA Intergenic Intergenic 45769 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4996 chr2R 9721911 9722058 + 12 NA exon (FBgn0033873, exon 2 of 2) protein_coding-exon (FBgn0033873, exon 2 of 2) 609 FBgn0033873 FBgn0033873 FBtr0087646 CG6337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3751 chr2L 22555609 22555782 + 12 NA intron (FBgn0058006, intron 7 of 9) protein_coding-intron (FBgn0058006, intron 7 of 9) 83213 FBgn0040011 FBgn0040011 FBtr0302387 CG17494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12744 chr3R 27465540 27465594 + 12 NA intron (FBgn0039862, intron 2 of 3) protein_coding-intron (FBgn0039862, intron 2 of 3) 17709 FBgn0039862 FBgn0039862 FBtr0330107 kek6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9064 chr3R 1338381 1338435 + 12 NA exon (FBgn0010399, exon 9 of 15) protein_coding-exon (FBgn0010399, exon 9 of 15) 10376 FBgn0264427 FBgn0264427 FBtr0332547 CR43845 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_12337 chr3R 25290561 25290743 + 12 NA intron (FBgn0004369, intron 2 of 12) protein_coding-intron (FBgn0004369, intron 2 of 12) -14768 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3639 chr2L 22190456 22190615 + 12 NA intron (FBgn0259683, intron 5 of 6) protein_coding-intron (FBgn0259683, intron 5 of 6) 15120 FBgn0032981 FBgn0032981 FBtr0304739 CG3635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10820 chr3R 14468178 14468316 + 12 NA intron (FBgn0263974, intron 3 of 9) protein_coding-intron (FBgn0263974, intron 3 of 9) -1068 FBgn0038632 FBgn0038632 FBtr0290199 CG14301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5482 chr2R 14158228 14158342 + 12 NA Intergenic Intergenic 6413 FBgn0003022 FBgn0003022 FBtr0086768 Ote protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4766 chr2R 7889931 7890032 + 12 NA exon (FBgn0004839, exon 6 of 7) protein_coding-exon (FBgn0004839, exon 6 of 7) 13343 FBgn0033673 FBgn0033673 FBtr0088043 CG8298 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1168 chr2L 8753707 8753928 + 12 NA TTS (FBgn0032065) protein_coding-TTS (FBgn0032065) 1512 FBgn0032065 FBgn0032065 FBtr0079732 CG12438 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9829 chr3R 7333033 7333102 + 12 NA Intergenic Intergenic 6275 FBgn0037908 FBgn0037908 FBtr0082395 dpr5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11166 chr3R 16823470 16823524 + 12 NA intron (FBgn0013995, intron 2 of 10) protein_coding-intron (FBgn0013995, intron 2 of 8) 9212 FBgn0038845 FBgn0038845 FBtr0084048 CG10827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1567 chr2L 11745235 11745363 + 12 NA Intergenic Intergenic 6347 FBgn0032373 FBgn0032373 FBtr0080255 Vha100-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12974 chr4 871903 872157 + 12 NA Intergenic Intergenic -6898 FBgn0039937 FBgn0039937 FBtr0089251 fd102C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12377 chr3R 25457990 25458111 + 12 NA exon (FBgn0015129, exon 5 of 5) protein_coding-exon (FBgn0015129, exon 5 of 5) 13294 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12724 chr3R 27329760 27329856 + 12 NA exon (FBgn0039851, exon 5 of 7) protein_coding-exon (FBgn0039851, exon 5 of 7) 4847 FBgn0039851 FBgn0039851 FBtr0085790 mey protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9014 chr3R 917023 917189 + 12 NA Intergenic Intergenic -4357 FBgn0010313 FBgn0010313 FBtr0078844 corto protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13476 chrX 1838128 1838264 + 12 NA intron (FBgn0264562, intron 2 of 11) protein_coding-intron (FBgn0264562, intron 2 of 11) 2223 FBgn0264562 FBgn0264562 FBtr0333339 Hr4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13450 chrX 1400460 1400750 + 12 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 1 of 10) 1237 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9313 chr3R 3102722 3102782 + 12 NA exon (FBgn0259172, exon 1 of 3) protein_coding-exon (FBgn0259172, exon 1 of 3) 5438 FBgn0037493 FBgn0037493 FBtr0081579 CG10032 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7542 chr3L 10121188 10121281 + 12 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 23592 FBgn0086076 FBgn0086076 FBtr0114352 snoRNA:MeU2-A31 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_908 chr2L 6688192 6688345 + 12 NA exon (FBgn0031850, exon 11 of 13) protein_coding-exon (FBgn0031850, exon 11 of 13) 1125 FBgn0031850 FBgn0031850 FBtr0079314 Tsp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1674 chr2L 12640411 12640481 + 12 NA intron (FBgn0032439, intron 2 of 2) protein_coding-intron (FBgn0032439, intron 2 of 2) 5910 FBgn0032439 FBgn0032439 FBtr0080376 Ref2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11429 chr3R 20519965 20520152 + 12 NA intron (FBgn0003429, intron 14 of 26) protein_coding-intron (FBgn0003429, intron 13 of 24) -20448 FBgn0039217 FBgn0039217 FBtr0084687 CG13627 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12786 chr3R 27666076 27666167 + 12 NA exon (FBgn0039883, exon 10 of 10) protein_coding-exon (FBgn0039883, exon 10 of 10) 14555 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5924 chr2R 17927176 17927318 + 12 NA promoter-TSS (FBgn0085399) protein_coding-promoter-TSS (FBgn0085399) -311 FBgn0085399 FBgn0085399 FBtr0332252 CG34370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_730 chr2L 5211918 5212084 + 12 NA TTS (FBgn0031690) protein_coding-TTS (FBgn0031690) 1540 FBgn0031689 FBgn0031689 FBtr0079062 Cyp28d1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8475 chr3L 18074959 18075127 + 12 NA intron (FBgn0262898, intron 2 of 2) protein_coding-intron (FBgn0262898, intron 2 of 2) 3367 FBgn0262898 FBgn0262898 FBtr0306318 CG43253 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10752 chr3R 14089207 14089261 + 12 NA Intergenic Intergenic -4276 FBgn0038592 FBgn0038592 FBtr0083571 CG18599 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7045 chr3L 4433725 4433916 + 12 NA exon (FBgn0000038, exon 5 of 7) protein_coding-exon (FBgn0000038, exon 5 of 7) -2901 FBgn0035544 FBgn0035544 FBtr0073301 CG15021 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8478 chr3L 18113117 18113320 + 12 NA TTS (FBgn0052195) protein_coding-TTS (FBgn0052195) 1871 FBgn0262100 FBgn0262100 FBtr0304019 CG42853 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2875 chr2L 18296116 18296197 + 12 NA exon (FBgn0032677, exon 1 of 1) protein_coding-exon (FBgn0032677, exon 1 of 1) 1252 FBgn0032677 FBgn0032677 FBtr0081050 CG5790 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1293 chr2L 9008945 9009031 + 12 NA Intergenic Intergenic -1598 FBgn0032087 FBgn0032087 FBtr0079765 CG9568 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4350 chr2R 4846822 4846940 + 12 NA intron (FBgn0011300, intron 5 of 7) protein_coding-intron (FBgn0011300, intron 5 of 7) 7035 FBgn0011300 FBgn0011300 FBtr0300599 babo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8869 chr3LHet 912450 912576 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3222 chr2L 20501983 20502150 + 12 NA Intergenic Intergenic 6960 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5766 chr2R 16730917 16731058 + 12 NA Intergenic Intergenic 6437 FBgn0034552 FBgn0034552 FBtr0071561 CG17999 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5806 chr2R 17074800 17074978 + 12 NA exon (FBgn0003891, exon 6 of 9) protein_coding-exon (FBgn0003891, exon 6 of 9) 3952 FBgn0003891 FBgn0003891 FBtr0071582 tud protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11159 chr3R 16749041 16749174 + 12 NA intron (FBgn0038842, intron 1 of 7) protein_coding-intron (FBgn0038842, intron 1 of 5) 7968 FBgn0051191 FBgn0051191 FBtr0302412 CG31191 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12963 chr4 736768 736936 + 12 NA intron (FBgn0005558, intron 5 of 8) protein_coding-intron (FBgn0005558, intron 4 of 7) -8178 FBgn0005666 FBgn0005666 FBtr0301341 bt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7587 chr3L 10695328 10695690 + 12 NA Intergenic Intergenic -5532 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5150 chr2R 11079047 11079101 + 12 NA Intergenic Intergenic 1659 FBgn0259966 FBgn0259966 FBtr0300323 Sfp51E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12244 chr3R 24807371 24807521 + 12 NA Intergenic Intergenic -11370 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10816 chr3R 14451295 14451472 + 12 NA intron (FBgn0263974, intron 3 of 9) protein_coding-intron (FBgn0263974, intron 3 of 9) 2877 FBgn0051228 FBgn0051228 FBtr0083693 tRNA:CR31228 tRNA Nup98-S2-pascual-garcia2017_R1_peak_3318 chr2L 20982577 20982667 + 12 NA intron (FBgn0250867, intron 5 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -13655 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3001 chr2L 19284109 19284163 + 12 NA Intergenic Intergenic 15715 FBgn0032768 FBgn0032768 FBtr0081225 CG17564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7456 chr3L 8921162 8921254 + 12 NA exon (FBgn0035936, exon 5 of 7) protein_coding-exon (FBgn0035936, exon 5 of 7) 8705 FBgn0264305 FBgn0264305 FBtr0331520 CG43783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9115 chr3R 1872880 1873029 + 12 NA Intergenic Intergenic 10305 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3482 chr2L 21835973 21836270 + 12 NA exon (FBgn0003866, exon 2 of 3) protein_coding-exon (FBgn0003866, exon 2 of 3) 7528 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5971 chr2R 18324658 18324712 + 12 NA Intergenic Intergenic 9701 FBgn0034730 FBgn0034730 FBtr0071830 ppk12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5456 chr2R 13990675 13990833 + 12 NA exon (FBgn0034301, exon 4 of 5) protein_coding-exon (FBgn0034301, exon 4 of 5) 5137 FBgn0034301 FBgn0034301 FBtr0330001 CG5756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1111 chr2L 8589114 8589306 + 12 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 5279 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_163 chr2L 1065795 1065880 + 12 NA intron (FBgn0003310, intron 1 of 4) protein_coding-intron (FBgn0003310, intron 1 of 4) 11974 FBgn0003310 FBgn0003310 FBtr0077994 S protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3417 chr2L 21637696 21638026 + 12 NA intron (FBgn0023416, intron 7 of 9) protein_coding-intron (FBgn0023416, intron 8 of 18) 5274 FBgn0023416 FBgn0023416 FBtr0100324 Ac3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12008 chr3R 23919572 23919748 + 12 NA Intergenic Intergenic -52942 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8685 chr3L 22272115 22272298 + 12 NA intron (FBgn0025702, intron 3 of 8) protein_coding-intron (FBgn0025702, intron 3 of 8) 1742 FBgn0025702 FBgn0025702 FBtr0306597 srpk79D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8030 chr3L 14245664 14245770 + 12 NA Intergenic Intergenic 15982 FBgn0036417 FBgn0036417 FBtr0075741 CG7906 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11709 chr3R 22558946 22559085 + 12 NA Intergenic Intergenic 3003 FBgn0039453 FBgn0039453 FBtr0085044 CG6403 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8309 chr3L 16848473 16848646 + 12 NA promoter-TSS (FBgn0003410) protein_coding-promoter-TSS (FBgn0003410) -460 FBgn0003410 FBgn0003410 FBtr0075333 sina protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12759 chr3R 27527683 27527842 + 12 NA Intergenic Intergenic 6300 FBgn0261583 FBgn0261583 FBtr0302894 CG42693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4821 chr2R 8330738 8330879 + 12 NA intron (FBgn0033739, intron 1 of 5) protein_coding-intron (FBgn0033739, intron 1 of 5) -1983 FBgn0050334 FBgn0050334 FBtr0305078 CG30334 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1047 chr2L 8066076 8066200 + 12 NA exon (FBgn0011230, exon 6 of 13) protein_coding-exon (FBgn0011230, exon 6 of 13) 5486 FBgn0011230 FBgn0011230 FBtr0333088 poe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2518 chr2L 16761382 16761486 + 12 NA Intergenic Intergenic -1296 FBgn0032602 FBgn0032602 FBtr0080933 CG13278 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4353 chr2R 4878675 4878867 + 12 NA Intergenic Intergenic -5708 FBgn0033359 FBgn0033359 FBtr0273385 CG8213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5208 chr2R 11645006 11645128 + 12 NA intron (FBgn0050089, intron 4 of 6) protein_coding-intron (FBgn0050089, intron 4 of 6) 30164 FBgn0050089 FBgn0050089 FBtr0087285 CG30089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7594 chr3L 10703147 10703463 + 12 NA Intergenic Intergenic -13328 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10452 chr3R 12202066 12202261 + 12 NA exon (FBgn0003513, exon 8 of 8) protein_coding-exon (FBgn0003513, exon 8 of 8) -5908 FBgn0038423 FBgn0038423 FBtr0300678 CG10317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11796 chr3R 23134543 23134643 + 12 NA exon (FBgn0039510, exon 19 of 32) protein_coding-exon (FBgn0039510, exon 19 of 32) 13454 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7341 chr3L 7740718 7740832 + 12 NA exon (FBgn0035816, exon 1 of 1) protein_coding-exon (FBgn0035816, exon 1 of 1) 331 FBgn0035816 FBgn0035816 FBtr0076809 CG13685 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2347 chr2L 15864275 15864380 + 12 NA TTS (FBgn0261924) protein_coding-TTS (FBgn0261924) 1065 FBgn0261924 FBgn0261924 FBtr0303588 CG42791 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11804 chr3R 23143343 23143404 + 12 NA exon (FBgn0039510, exon 8 of 32) protein_coding-exon (FBgn0039510, exon 8 of 32) 4674 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_125 chr2L 951598 951748 + 12 NA exon (FBgn0028481, exon 4 of 11) protein_coding-exon (FBgn0028481, exon 4 of 11) 28880 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6351 chr2RHet 482371 482428 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9747 chr3R 6723565 6723639 + 12 NA Intergenic Intergenic -4350 FBgn0037855 FBgn0037855 FBtr0302935 CG6621 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7722 chr3L 12007546 12007600 + 12 NA intron (FBgn0041096, intron 4 of 6) protein_coding-intron (FBgn0041096, intron 4 of 7) 11318 FBgn0036240 FBgn0036240 FBtr0332709 CG6928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11187 chr3R 17117168 17117434 + 12 NA exon (FBgn0038880, exon 2 of 6) protein_coding-exon (FBgn0038880, exon 2 of 6) 2419 FBgn0038880 FBgn0038880 FBtr0084099 SIFR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7970 chr3L 13817773 13817827 + 12 NA Intergenic Intergenic -13102 FBgn0262813 FBgn0262813 FBtr0306058 CG43184 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5579 chr2R 15134229 15134488 + 12 NA Intergenic Intergenic -2908 FBgn0004003 FBgn0004003 FBtr0086510 wbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7627 chr3L 10958392 10958500 + 12 NA Intergenic Intergenic -7302 FBgn0036112 FBgn0036112 FBtr0076194 CG14147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7489 chr3L 9197314 9197406 + 12 NA exon (FBgn0035968, exon 2 of 4) protein_coding-exon (FBgn0035968, exon 2 of 4) 2353 FBgn0035968 FBgn0035968 FBtr0332126 Slc45-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8537 chr3L 18978254 18978322 + 12 NA TTS (FBgn0036836) protein_coding-TTS (FBgn0036836) 227 FBgn0036835 FBgn0036835 FBtr0075024 CG14075 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12354 chr3R 25378726 25379070 + 12 NA Intergenic Intergenic -3211 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3620 chr2L 22096365 22096639 + 12 NA Intergenic Intergenic 7899 FBgn0051703 FBgn0051703 FBtr0085946 CG31703 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11948 chr3R 23656853 23656971 + 12 NA intron (FBgn0085382, intron 3 of 11) protein_coding-intron (FBgn0085382, intron 3 of 11) -13899 FBgn0067407 FBgn0067407 FBtr0085225 Or98P pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3708 chr2L 22361721 22361910 + 12 NA intron (FBgn0039972, intron 3 of 8) protein_coding-intron (FBgn0039972, intron 1 of 6) 7460 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5567 chr2R 14955956 14956057 + 12 NA intron (FBgn0004168, intron 1 of 10) protein_coding-intron (FBgn0004168, intron 1 of 10) 1346 FBgn0004168 FBgn0004168 FBtr0086577 5-HT1A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12989 chr4 960153 960563 + 12 NA intron (FBgn0019985, intron 2 of 5) protein_coding-intron (FBgn0019985, intron 2 of 8) 2913 FBgn0019985 FBgn0019985 FBtr0332859 mGluRA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4483 chr2R 5784921 5785000 + 12 NA exon (FBgn0050007, exon 11 of 12) protein_coding-exon (FBgn0050007, exon 11 of 12) 5464 FBgn0050007 FBgn0050007 FBtr0300921 CG30007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4797 chr2R 8121109 8121163 + 12 NA Intergenic Intergenic -4321 FBgn0033702 FBgn0033702 FBtr0114562 CG8854 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9282 chr3R 2855889 2856124 + 12 NA Intergenic Intergenic -22051 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4477 chr2R 5705420 5705546 + 12 NA exon (FBgn0040093, exon 2 of 2) protein_coding-exon (FBgn0040093, exon 2 of 2) 678 FBgn0040093 FBgn0040093 FBtr0088476 lectin-46Ca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4982 chr2R 9663596 9663834 + 12 NA exon (FBgn0033867, exon 4 of 5) protein_coding-exon (FBgn0033867, exon 4 of 5) 4035 FBgn0033868 FBgn0033868 FBtr0332255 S-Lap7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7514 chr3L 9865518 9865632 + 12 NA Intergenic Intergenic -6510 FBgn0085411 FBgn0085411 FBtr0332687 CG34382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1495 chr2L 11114467 11114653 + 12 NA exon (FBgn0041246, exon 1 of 4) protein_coding-exon (FBgn0041246, exon 1 of 4) 377 FBgn0041246 FBgn0041246 FBtr0080198 Gr32a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12653 chr3R 27005642 27005910 + 12 NA exon (FBgn0051004, exon 16 of 16) protein_coding-exon (FBgn0051004, exon 16 of 16) -10951 FBgn0086704 FBgn0086704 FBtr0085782 stops protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9094 chr3R 1670923 1671082 + 12 NA exon (FBgn0037387, exon 3 of 4) protein_coding-exon (FBgn0037387, exon 3 of 4) 1400 FBgn0037387 FBgn0037387 FBtr0305954 CG1213 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2515 chr2L 16751475 16751623 + 12 NA exon (FBgn0032600, exon 7 of 7) protein_coding-exon (FBgn0032600, exon 7 of 7) -2787 FBgn0032601 FBgn0032601 FBtr0080894 yellow-b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7154 chr3L 6115507 6115632 + 12 NA exon (FBgn0005658, exon 10 of 10) protein_coding-exon (FBgn0005658, exon 10 of 10) 6338 FBgn0002440 FBgn0002440 FBtr0077062 l(3)mbn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11888 chr3R 23420814 23420970 + 12 NA Intergenic Intergenic -1632 FBgn0039527 FBgn0039527 FBtr0085202 CG5639 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12113 chr3R 24301154 24301292 + 12 NA TTS (FBgn0039584) protein_coding-TTS (FBgn0039584) -9056 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6862 chr3L 1763296 1763350 + 12 NA exon (FBgn0013811, exon 7 of 9) protein_coding-exon (FBgn0013811, exon 7 of 9) 7017 FBgn0035268 FBgn0035268 FBtr0334074 CG8001 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5220 chr2R 11768622 11768775 + 12 NA intron (FBgn0264089, intron 10 of 20) protein_coding-intron (FBgn0264089, intron 9 of 19) -12048 FBgn0050085 FBgn0050085 FBtr0087306 CG30085 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1661 chr2L 12593816 12593964 + 12 NA exon (FBgn0085424, exon 2 of 6) protein_coding-exon (FBgn0085424, exon 2 of 6) -24458 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_336 chr2L 1851094 1851187 + 12 NA exon (FBgn0051665, exon 5 of 13) protein_coding-exon (FBgn0051665, exon 5 of 13) 14510 FBgn0051665 FBgn0051665 FBtr0304911 wry protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6418 chr2RHet 864437 864592 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10430 chr3R 11960353 11960453 + 12 NA intron (FBgn0003319, intron 2 of 10) protein_coding-intron (FBgn0003319, intron 2 of 10) 5952 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8543 chr3L 19049542 19049685 + 12 NA Intergenic Intergenic -3124 FBgn0263326 FBgn0263326 FBtr0308782 CG43407 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8937 chr3R 3785 3907 + 12 NA intron (FBgn0037213, intron 1 of 2) protein_coding-intron (FBgn0037213, intron 2 of 3) 3492 FBgn0037213 FBgn0037213 FBtr0078962 CG12581 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1189 chr2L 8783298 8783420 + 12 NA promoter-TSS (FBgn0261627) protein_coding-promoter-TSS (FBgn0261627) -865 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4277 chr2R 4371041 4371230 + 12 NA exon (FBgn0050361, exon 1 of 13) protein_coding-exon (FBgn0050361, exon 1 of 13) 11647 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10192 chr3R 10237137 10237242 + 12 NA intron (FBgn0086901, intron 6 of 15) protein_coding-intron (FBgn0086901, intron 5 of 14) -7126 FBgn0085417 FBgn0085417 FBtr0301081 CG34388 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7234 chr3L 6843791 6843948 + 12 NA Intergenic Intergenic 60611 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6963 chr3L 2947788 2947983 + 12 NA exon (FBgn0262593, exon 6 of 9) protein_coding-exon (FBgn0262593, exon 6 of 9) 3733 FBgn0052846 FBgn0052846 FBtr0304042 CG32846 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7529 chr3L 10073672 10073783 + 12 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) 8773 FBgn0036066 FBgn0036066 FBtr0076316 CG14160 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1441 chr2L 10574137 10574332 + 12 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) 3558 FBgn0032269 FBgn0032269 FBtr0304115 w-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4319 chr2R 4680876 4681003 + 12 NA exon (FBgn0033330, exon 1 of 1) protein_coding-exon (FBgn0033330, exon 1 of 1) 801 FBgn0033330 FBgn0033330 FBtr0088714 CG8746 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1059 chr2L 8251164 8251321 + 12 NA exon (FBgn0032010, exon 4 of 14) protein_coding-exon (FBgn0032010, exon 4 of 14) 1724 FBgn0032010 FBgn0032010 FBtr0079621 CG8086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5867 chr2R 17457497 17457682 + 12 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 5951 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3839 chr2L 22895596 22895761 + 12 NA intron (FBgn0250907, intron 8 of 8) protein_coding-intron (FBgn0250907, intron 8 of 8) 21144 FBgn0000384 FBgn0000384 FBtr0111126 cta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8482 chr3L 18151283 18151398 + 12 NA exon (FBgn0036781, exon 4 of 6) protein_coding-exon (FBgn0036781, exon 4 of 6) 4282 FBgn0036781 FBgn0036781 FBtr0075134 CG13699 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5729 chr2R 16339409 16339520 + 12 NA intron (FBgn0086604, intron 3 of 18) protein_coding-intron (FBgn0086604, intron 3 of 15) 27624 FBgn0086604 FBgn0086604 FBtr0112774 CG12484 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10842 chr3R 14686757 14686877 + 12 NA Intergenic Intergenic -9297 FBgn0051226 FBgn0051226 FBtr0083676 CG31226 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9540 chr3R 4961056 4961144 + 12 NA intron (FBgn0003165, intron 1 of 6) protein_coding-intron (FBgn0003165, intron 8 of 12) 22572 FBgn0003165 FBgn0003165 FBtr0305197 pum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6771 chr3L 915008 915231 + 12 NA intron (FBgn0264574, intron 1 of 14) protein_coding-intron (FBgn0264574, intron 1 of 12) 6007 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4690 chr2R 7460700 7460820 + 12 NA Intergenic Intergenic 15076 FBgn0082993 FBgn0082993 FBtr0113499 snoRNA:Psi28S-1936 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8572 chr3L 19674089 19674181 + 12 NA Intergenic Intergenic 6318 FBgn0036900 FBgn0036900 FBtr0331859 CG8765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1692 chr2L 12726038 12726187 + 12 NA exon (FBgn0032456, exon 6 of 12) protein_coding-exon (FBgn0032456, exon 6 of 12) 3835 FBgn0032456 FBgn0032456 FBtr0090014 MRP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2521 chr2L 16782419 16782473 + 12 NA exon (FBgn0264695, exon 13 of 18) protein_coding-exon (FBgn0264695, exon 13 of 18) 8275 FBgn0000406 FBgn0000406 FBtr0080932 Cyt-b5-r protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6241 chr2R 20690148 20690202 + 12 NA Intergenic Intergenic 3854 FBgn0035069 FBgn0035069 FBtr0072377 CG3611 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7209 chr3L 6627399 6627462 + 12 NA exon (FBgn0004619, exon 12 of 13) protein_coding-exon (FBgn0004619, exon 12 of 13) 10298 FBgn0004619 FBgn0004619 FBtr0076982 Glu-RI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1268 chr2L 8898597 8898734 + 12 NA promoter-TSS (FBgn0085427) protein_coding-promoter-TSS (FBgn0085427) -139 FBgn0085427 FBgn0085427 FBtr0303889 CG34398 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7097 chr3L 5602382 5602498 + 12 NA Intergenic Intergenic -1040 FBgn0035624 FBgn0035624 FBtr0077126 Eaf6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4244 chr2R 4117142 4117329 + 12 NA exon (FBgn0010109, exon 3 of 3) protein_coding-exon (FBgn0010109, exon 3 of 3) -1003 FBgn0085246 FBgn0085246 FBtr0112410 CG34217 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5515 chr2R 14487871 14488044 + 12 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 11303 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11729 chr3R 22662806 22662960 + 12 NA intron (FBgn0262473, intron 3 of 4) protein_coding-intron (FBgn0262473, intron 2 of 3) 24210 FBgn0262379 FBgn0262379 FBtr0304222 mir-1012 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_7919 chr3L 13450633 13450733 + 12 NA promoter-TSS (FBgn0036367) protein_coding-promoter-TSS (FBgn0036367) -345 FBgn0036367 FBgn0036367 FBtr0075824 CG10116 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7644 chr3L 11295931 11295998 + 12 NA Intergenic Intergenic -6945 FBgn0036152 FBgn0036152 FBtr0076183 CG6175 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1360 chr2L 9591050 9591104 + 12 NA exon (FBgn0032131, exon 2 of 3) protein_coding-exon (FBgn0032131, exon 2 of 3) 1601 FBgn0032131 FBgn0032131 FBtr0079836 CG3841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2369 chr2L 15953495 15953690 + 12 NA intron (FBgn0028645, intron 1 of 6) protein_coding-intron (FBgn0028645, intron 1 of 6) -4266 FBgn0028856 FBgn0028856 FBtr0300614 CG18063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10108 chr3R 9573395 9573449 + 12 NA exon (FBgn0085412, exon 4 of 13) protein_coding-exon (FBgn0085412, exon 4 of 13) -18075 FBgn0038179 FBgn0038179 FBtr0082825 CG9312 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5373 chr2R 13223935 13224004 + 12 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -29162 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10144 chr3R 9775098 9775152 + 12 NA TTS (FBgn0047199) protein_coding-TTS (FBgn0047199) 968 FBgn0047199 FBgn0047199 FBtr0082864 CG31517 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9411 chr3R 3844779 3844852 + 12 NA exon (FBgn0037541, exon 6 of 7) protein_coding-exon (FBgn0037541, exon 6 of 7) 5269 FBgn0037540 FBgn0037540 FBtr0081786 Pbp95 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11409 chr3R 20043008 20043244 + 12 NA exon (FBgn0039167, exon 1 of 1) protein_coding-exon (FBgn0039167, exon 1 of 1) 1314 FBgn0039167 FBgn0039167 FBtr0084572 CG17786 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1238 chr2L 8861590 8861689 + 12 NA Intergenic Intergenic -1137 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5430 chr2R 13795307 13795361 + 12 NA exon (FBgn0011589, exon 7 of 17) protein_coding-exon (FBgn0011589, exon 7 of 17) 12751 FBgn0034284 FBgn0034284 FBtr0086803 CG14491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1663 chr2L 12595197 12595370 + 12 NA intron (FBgn0085424, intron 2 of 5) protein_coding-intron (FBgn0085424, intron 2 of 5) -23065 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2327 chr2L 15728320 15728374 + 12 NA exon (FBgn0010382, exon 6 of 6) protein_coding-exon (FBgn0010382, exon 6 of 6) -17248 FBgn0264545 FBgn0264545 FBtr0333239 CG43924 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_257 chr2L 1444694 1444968 + 12 NA Intergenic Intergenic 2105 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12782 chr3R 27661379 27661546 + 12 NA exon (FBgn0039883, exon 6 of 8) protein_coding-exon (FBgn0039883, exon 6 of 8) 9896 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6811 chr3L 1227852 1227912 + 12 NA exon (FBgn0004430, exon 1 of 1) protein_coding-exon (FBgn0004430, exon 1 of 1) 135 FBgn0004430 FBgn0004430 FBtr0072631 LysS protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5875 chr2R 17470021 17470089 + 12 NA promoter-TSS (FBgn0050222) protein_coding-promoter-TSS (FBgn0050222) -942 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11028 chr3R 15906186 15906339 + 12 NA TTS (FBgn0003249) protein_coding-TTS (FBgn0003249) 1910 FBgn0003249 FBgn0003249 FBtr0083876 Rh3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11483 chr3R 21683044 21683098 + 12 NA Intergenic Intergenic 5695 FBgn0039379 FBgn0039379 FBtr0084907 CG5886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2717 chr2L 17648240 17648301 + 12 NA exon (FBgn0015609, exon 24 of 24) protein_coding-exon (FBgn0015609, exon 24 of 24) 20411 FBgn0262356 FBgn0262356 FBtr0304636 CG43054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2895 chr2L 18458934 18459121 + 12 NA intron (FBgn0263049, intron 1 of 2) ncRNA-intron (FBgn0263049, intron 1 of 2) 3310 FBgn0263049 FBgn0263049 FBtr0306973 CR43344 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8928 chr3LHet 2425163 2425296 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2531 chr2L 16860370 16860522 + 12 NA exon (FBgn0032615, exon 3 of 3) protein_coding-exon (FBgn0032615, exon 3 of 3) 1043 FBgn0032615 FBgn0032615 FBtr0080923 CG6012 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7797 chr3L 12575936 12576046 + 12 NA intron (FBgn0015904, intron 1 of 4) protein_coding-intron (FBgn0015904, intron 1 of 4) 2219 FBgn0015904 FBgn0015904 FBtr0300551 ara protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12760 chr3R 27531853 27531975 + 12 NA Intergenic Intergenic 2148 FBgn0261583 FBgn0261583 FBtr0302894 CG42693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10057 chr3R 9190673 9190787 + 12 NA promoter-TSS (FBgn0027610) protein_coding-promoter-TSS (FBgn0027610) -420 FBgn0086371 FBgn0086371 FBtr0082772 poly protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5367 chr2R 13167243 13167482 + 12 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) 17518 FBgn0261642 FBgn0261642 FBtr0086993 mbl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4336 chr2R 4750419 4750520 + 12 NA exon (FBgn0011286, exon 2 of 27) protein_coding-exon (FBgn0011286, exon 2 of 27) 2600 FBgn0011286 FBgn0011286 FBtr0308083 Rya-r44F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13657 chrX 11369707 11369861 + 12 NA intron (FBgn0262685, intron 6 of 7) protein_coding-intron (FBgn0262685, intron 6 of 7) -5558 FBgn0030304 FBgn0030304 FBtr0073504 Cyp4g15 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4404 chr2R 5210274 5210411 + 12 NA intron (FBgn0033403, intron 2 of 3) protein_coding-intron (FBgn0033403, intron 2 of 3) -9735 FBgn0262220 FBgn0262220 FBtr0304278 mir-987 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_10048 chr3R 9124853 9125012 + 12 NA TTS (FBgn0038135) protein_coding-TTS (FBgn0038135) 229 FBgn0038136 FBgn0038136 FBtr0082741 CG8774 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2921 chr2L 18719363 18719511 + 12 NA intron (FBgn0032707, intron 1 of 1) protein_coding-intron (FBgn0032707, intron 1 of 1) -5674 FBgn0032706 FBgn0032706 FBtr0114486 Irk3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6058 chr2R 19051963 19052162 + 12 NA exon (FBgn0085400, exon 14 of 14) protein_coding-exon (FBgn0085400, exon 14 of 14) -6354 FBgn0034828 FBgn0034828 FBtr0306080 CG13545 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2478 chr2L 16502656 16502783 + 12 NA intron (FBgn0032586, intron 1 of 3) protein_coding-intron (FBgn0032586, intron 1 of 3) 11179 FBgn0032586 FBgn0032586 FBtr0333486 Tpr2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_781 chr2L 5581601 5581695 + 12 NA promoter-TSS (FBgn0031722) protein_coding-promoter-TSS (FBgn0031722) -532 FBgn0031722 FBgn0031722 FBtr0079120 CG14011 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9554 chr3R 5103059 5103240 + 12 NA Intergenic Intergenic 10395 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11738 chr3R 22728889 22729003 + 12 NA intron (FBgn0004359, intron 2 of 2) protein_coding-intron (FBgn0004359, intron 2 of 2) 9662 FBgn0004510 FBgn0004510 FBtr0330167 Ets97D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1304 chr2L 9034627 9034759 + 12 NA Intergenic Intergenic -9289 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9162 chr3R 2156885 2157040 + 12 NA exon (FBgn0037428, exon 2 of 2) protein_coding-exon (FBgn0037428, exon 2 of 2) 990 FBgn0037428 FBgn0037428 FBtr0078611 Osi18 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_260 chr2L 1452265 1452347 + 12 NA Intergenic Intergenic 9580 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5332 chr2R 12690980 12691090 + 12 NA Intergenic Intergenic -7123 FBgn0034159 FBgn0034159 FBtr0300552 CG15615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_344 chr2L 1911058 1911112 + 12 NA promoter-TSS (FBgn0031374) protein_coding-promoter-TSS (FBgn0031374) 26463 FBgn0031374 FBgn0031374 FBtr0110882 CG7337 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3045 chr2L 19515847 19515953 + 12 NA exon (FBgn0032797, exon 3 of 17) protein_coding-exon (FBgn0032797, exon 3 of 17) 1301 FBgn0032797 FBgn0032797 FBtr0299519 CG10186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2662 chr2L 17326238 17326450 + 12 NA Intergenic Intergenic -14524 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11505 chr3R 21763479 21763586 + 12 NA intron (FBgn0039396, intron 2 of 6) protein_coding-intron (FBgn0039396, intron 2 of 6) 6409 FBgn0054024 FBgn0054024 FBtr0308933 CR34024 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11815 chr3R 23161120 23161288 + 12 NA Intergenic Intergenic -4600 FBgn0039511 FBgn0039511 FBtr0085170 CG3330 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_837 chr2L 5938265 5938328 + 12 NA exon (FBgn0015381, exon 5 of 5) protein_coding-exon (FBgn0015381, exon 5 of 5) 4967 FBgn0261055 FBgn0261055 FBtr0301935 Sfp26Ad protein_coding Nup98-S2-pascual-garcia2017_R1_peak_847 chr2L 6054018 6054081 + 12 NA promoter-TSS (FBgn0031770) protein_coding-promoter-TSS (FBgn0031770) -258 FBgn0031770 FBgn0031770 FBtr0079187 CG13995 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1244 chr2L 8868287 8868496 + 12 NA TTS (FBgn0032072) protein_coding-TTS (FBgn0032072) 1624 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4808 chr2R 8196548 8196620 + 12 NA exon (FBgn0033710, exon 7 of 7) protein_coding-exon (FBgn0033710, exon 7 of 7) -1610 FBgn0050203 FBgn0050203 FBtr0273303 CG30203 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_916 chr2L 6765671 6765857 + 12 NA exon (FBgn0031857, exon 12 of 17) protein_coding-exon (FBgn0031857, exon 12 of 17) -6136 FBgn0031856 FBgn0031856 FBtr0290242 CG11322 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2019 chr2L 14561753 14561953 + 12 NA Intergenic Intergenic 1873 FBgn0028913 FBgn0028913 FBtr0080661 CG3473 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2639 chr2L 17236284 17236400 + 12 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -3017 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10156 chr3R 9911927 9912103 + 12 NA intron (FBgn0038197, intron 10 of 10) protein_coding-intron (FBgn0038197, intron 10 of 10) -4481 FBgn0038198 FBgn0038198 FBtr0082889 Npc2b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2843 chr2L 18094204 18094324 + 12 NA Intergenic Intergenic -2026 FBgn0032663 FBgn0032663 FBtr0081045 CG15153 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4370 chr2R 4938805 4938950 + 12 NA intron (FBgn0033368, intron 2 of 9) protein_coding-intron (FBgn0033368, intron 3 of 10) -6664 FBgn0033367 FBgn0033367 FBtr0088663 PO45 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6931 chr3L 2508717 2508823 + 12 NA exon (FBgn0010905, exon 15 of 16) protein_coding-exon (FBgn0010905, exon 15 of 16) -5164 FBgn0035348 FBgn0035348 FBtr0072966 CG16758 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4712 chr2R 7612747 7612881 + 12 NA exon (FBgn0033649, exon 5 of 5) protein_coding-exon (FBgn0033649, exon 5 of 5) 13047 FBgn0033649 FBgn0033649 FBtr0113070 pyr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3440 chr2L 21727424 21727525 + 12 NA exon (FBgn0051619, exon 18 of 19) protein_coding-exon (FBgn0051619, exon 18 of 19) 29992 FBgn0086779 FBgn0086779 FBtr0085910 step protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5242 chr2R 11939769 11940018 + 12 NA intron (FBgn0034071, intron 10 of 12) protein_coding-intron (FBgn0034071, intron 10 of 12) 4716 FBgn0034071 FBgn0034071 FBtr0087210 CG8405 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11243 chr3R 17558954 17559008 + 12 NA Intergenic Intergenic 3037 FBgn0261060 FBgn0261060 FBtr0301940 Sfp93F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9861 chr3R 7677640 7677797 + 12 NA intron (FBgn0037956, intron 1 of 2) protein_coding-intron (FBgn0037956, intron 1 of 2) 17465 FBgn0037956 FBgn0037956 FBtr0299594 CG6959 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6214 chr2R 20396066 20396191 + 12 NA TTS (FBgn0035014) protein_coding-TTS (FBgn0035014) 1730 FBgn0035014 FBgn0035014 FBtr0072300 CG13581 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9564 chr3R 5118518 5118653 + 12 NA Intergenic Intergenic 25831 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9958 chr3R 8480864 8481019 + 12 NA intron (FBgn0038072, intron 1 of 7) protein_coding-intron (FBgn0038072, intron 1 of 7) 642 FBgn0038072 FBgn0038072 FBtr0113225 CG6225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4849 chr2R 8668714 8668820 + 12 NA exon (FBgn0003326, exon 1 of 4) protein_coding-exon (FBgn0003326, exon 1 of 4) 718 FBgn0003326 FBgn0003326 FBtr0087855 sca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2311 chr2L 15616205 15616398 + 12 NA promoter-TSS (FBgn0028947) protein_coding-promoter-TSS (FBgn0028947) 32 FBgn0028948 FBgn0028948 FBtr0080782 CG15253 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8714 chr3L 22958252 22958306 + 12 NA Intergenic Intergenic -9877 FBgn0052461 FBgn0052461 FBtr0078567 CG32461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1041 chr2L 8050439 8050601 + 12 NA exon (FBgn0031981, exon 5 of 6) protein_coding-exon (FBgn0031981, exon 5 of 6) 7049 FBgn0031981 FBgn0031981 FBtr0079541 CG7466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11342 chr3R 18894067 18894220 + 12 NA Intergenic Intergenic -1162 FBgn0039048 FBgn0039048 FBtr0303508 CG17111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9486 chr3R 4446152 4446224 + 12 NA exon (FBgn0261929, exon 4 of 7) protein_coding-exon (FBgn0261929, exon 4 of 7) 15412 FBgn0026399 FBgn0026399 FBtr0310300 Or85e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5561 chr2R 14932845 14933034 + 12 NA Intergenic Intergenic -9047 FBgn0034413 FBgn0034413 FBtr0086597 CG15115 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5797 chr2R 16988379 16988671 + 12 NA promoter-TSS (FBgn0015721) protein_coding-promoter-TSS (FBgn0015721) -910 FBgn0015721 FBgn0015721 FBtr0089599 king-tubby protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11264 chr3R 17660276 17660424 + 12 NA TTS (FBgn0041229) protein_coding-TTS (FBgn0041229) 2125 FBgn0041229 FBgn0041229 FBtr0084133 Gr93a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11630 chr3R 22254492 22254580 + 12 NA TTS (FBgn0051084) ncRNA-TTS (FBgn0051084) 224 FBgn0263382 FBgn0263382 FBtr0309068 CR43434 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11368 chr3R 19196361 19196535 + 12 NA Intergenic Intergenic -2384 FBgn0262009 FBgn0262009 FBtr0304566 CG42827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9734 chr3R 6561260 6561425 + 12 NA exon (FBgn0037828, exon 1 of 1) protein_coding-exon (FBgn0037828, exon 1 of 1) 337 FBgn0037828 FBgn0037828 FBtr0082316 tomboy20 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2836 chr2L 18076383 18076494 + 12 NA Intergenic Intergenic -1831 FBgn0000120 FBgn0000120 FBtr0081030 Arr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3284 chr2L 20716366 20716626 + 12 NA Intergenic Intergenic -2080 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_175 chr2L 1204619 1204806 + 12 NA intron (FBgn0031324, intron 2 of 3) protein_coding-intron (FBgn0031324, intron 2 of 3) 471 FBgn0031324 FBgn0031324 FBtr0114498 CG14342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_537 chr2L 3680998 3681052 + 12 NA intron (FBgn0085369, intron 4 of 7) protein_coding-intron (FBgn0085369, intron 4 of 7) -10444 FBgn0261054 FBgn0261054 FBtr0301934 Sfp24Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5985 chr2R 18515982 18516134 + 12 NA exon (FBgn0053143, exon 6 of 8) protein_coding-exon (FBgn0053143, exon 6 of 8) 999 FBgn0053143 FBgn0053143 FBtr0071859 CG33143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1977 chr2L 14426380 14426684 + 12 NA Intergenic Intergenic -1401 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12323 chr3R 25237493 25237621 + 12 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -67863 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2529 chr2L 16843674 16843842 + 12 NA exon (FBgn0032614, exon 5 of 6) protein_coding-exon (FBgn0032614, exon 5 of 6) 3439 FBgn0032614 FBgn0032614 FBtr0080927 CG13284 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_881 chr2L 6395431 6395554 + 12 NA TTS (FBgn0259715) protein_coding-TTS (FBgn0259715) 1757 FBgn0259715 FBgn0259715 FBtr0299968 CG42369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_283 chr2L 1499698 1499861 + 12 NA exon (FBgn0031343, exon 3 of 4) protein_coding-exon (FBgn0031343, exon 3 of 4) 507 FBgn0031343 FBgn0031343 FBtr0077939 CG18131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4422 chr2R 5356745 5356874 + 12 NA intron (FBgn0259234, intron 4 of 18) protein_coding-intron (FBgn0259234, intron 4 of 18) -14356 FBgn0053757 FBgn0053757 FBtr0091758 CG33757 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11439 chr3R 20692865 20693102 + 12 NA TTS (FBgn0013949) protein_coding-TTS (FBgn0013949) 1910 FBgn0013949 FBgn0013949 FBtr0084709 Ela protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1569 chr2L 11759774 11759915 + 12 NA Intergenic Intergenic -5342 FBgn0259962 FBgn0259962 FBtr0300306 Sfp33A1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5599 chr2R 15427504 15427558 + 12 NA intron (FBgn0003435, intron 5 of 9) protein_coding-intron (FBgn0003435, intron 5 of 9) -12045 FBgn0262571 FBgn0262571 FBtr0304898 CG43111 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3066 chr2L 19681992 19682081 + 12 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 18932 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12243 chr3R 24804167 24804355 + 12 NA Intergenic Intergenic -8185 FBgn0039617 FBgn0039617 FBtr0085347 CG14521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5479 chr2R 14144999 14145096 + 12 NA Intergenic Intergenic 19651 FBgn0003022 FBgn0003022 FBtr0086768 Ote protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5659 chr2R 15824296 15824577 + 12 NA Intergenic Intergenic 3613 FBgn0263340 FBgn0263340 FBtr0308772 CR43421 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1016 chr2L 7809695 7809749 + 12 NA intron (FBgn0031952, intron 1 of 6) protein_coding-intron (FBgn0031952, intron 1 of 6) 975 FBgn0031952 FBgn0031952 FBtr0301331 cdc14 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2366 chr2L 15941765 15941967 + 12 NA exon (FBgn0028857, exon 1 of 3) protein_coding-exon (FBgn0028857, exon 1 of 3) 425 FBgn0028857 FBgn0028857 FBtr0300613 CG12448 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12901 chr3RHet 2350507 2350590 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_3122 chr2L 19905627 19905782 + 12 NA intron (FBgn0263873, intron 2 of 13) protein_coding-intron (FBgn0263873, intron 4 of 15) 6107 FBgn0262543 FBgn0262543 FBtr0332244 CR43097 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_3724 chr2L 22453179 22453273 + 12 NA Intergenic Intergenic 10254 FBgn0040010 FBgn0040010 FBtr0332631 CG17493 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9206 chr3R 2521232 2521463 + 12 NA exon (FBgn0004781, exon 2 of 2) protein_coding-exon (FBgn0004781, exon 2 of 2) 646 FBgn0004781 FBgn0004781 FBtr0081693 Ccp84Ac protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12754 chr3R 27493348 27493425 + 12 NA Intergenic Intergenic -1801 FBgn0039863 FBgn0039863 FBtr0085824 CG1815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12366 chr3R 25405962 25406212 + 12 NA Intergenic Intergenic 7735 FBgn0039670 FBgn0039670 FBtr0085472 CG7567 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12348 chr3R 25359931 25360047 + 12 NA promoter-TSS (FBgn0263588) ncRNA-promoter-TSS (FBgn0263588) -369 FBgn0263588 FBgn0263588 FBtr0309824 CR43613 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10531 chr3R 12620936 12620990 + 12 NA Intergenic Intergenic 6930 FBgn0015230 FBgn0015230 FBtr0083340 Glut3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3875 chr2LHet 205075 205266 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6225 chr2R 20505332 20505458 + 12 NA intron (FBgn0035041, intron 7 of 7) protein_coding-intron (FBgn0035041, intron 7 of 7) -2732 FBgn0035040 FBgn0035040 FBtr0072337 CG4741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8389 chr3L 17444737 17444876 + 12 NA exon (FBgn0036725, exon 2 of 2) protein_coding-exon (FBgn0036725, exon 2 of 2) 5157 FBgn0036725 FBgn0036725 FBtr0333689 CG18265 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6195 chr2R 20262995 20263209 + 12 NA exon (FBgn0004101, exon 3 of 4) protein_coding-exon (FBgn0004101, exon 3 of 4) 1516 FBgn0053537 FBgn0053537 FBtr0100849 tRNA:N5:60C tRNA Nup98-S2-pascual-garcia2017_R1_peak_1296 chr2L 9020176 9020260 + 12 NA Intergenic Intergenic 5186 FBgn0032090 FBgn0032090 FBtr0079778 CG9582 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1210 chr2L 8809283 8809435 + 12 NA promoter-TSS (FBgn0261629) protein_coding-promoter-TSS (FBgn0261629) -41 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2080 chr2L 14771362 14771536 + 12 NA Intergenic Intergenic 3532 FBgn0032549 FBgn0032549 FBtr0301695 CG4650 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9238 chr3R 2642216 2642277 + 12 NA Intergenic Intergenic 2814 FBgn0051485 FBgn0051485 FBtr0081662 tRNA:CR31485:Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_12098 chr3R 24255197 24255322 + 12 NA intron (FBgn0039584, intron 1 of 6) protein_coding-intron (FBgn0039584, intron 1 of 6) 11329 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11250 chr3R 17585965 17586042 + 12 NA exon (FBgn0259237, exon 4 of 7) protein_coding-exon (FBgn0259237, exon 4 of 7) 1507 FBgn0259237 FBgn0259237 FBtr0301691 CG42335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9878 chr3R 7863572 7863669 + 12 NA Intergenic Intergenic -2630 FBgn0037986 FBgn0037986 FBtr0301724 CG14736 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6546 chr2RHet 1919021 1919227 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6237 chr2R 20597571 20597783 + 12 NA intron (FBgn0053988, intron 3 of 5) protein_coding-intron (FBgn0053988, intron 3 of 5) -15768 FBgn0035050 FBgn0035050 FBtr0072442 ST6Gal protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6187 chr2R 20238632 20238845 + 12 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) 8349 FBgn0004101 FBgn0004101 FBtr0072271 bs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_977 chr2L 7231066 7231200 + 12 NA exon (FBgn0259111, exon 4 of 8) protein_coding-exon (FBgn0259111, exon 4 of 8) 1680 FBgn0264344 FBgn0264344 FBtr0332005 CG43800 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10301 chr3R 11267343 11267456 + 12 NA TTS (FBgn0038341) protein_coding-TTS (FBgn0038341) 1689 FBgn0000047 FBgn0000047 FBtr0083143 Act88F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3760 chr2L 22588576 22588704 + 12 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 55887 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11695 chr3R 22518537 22519024 + 12 NA exon (FBgn0039448, exon 2 of 2) protein_coding-exon (FBgn0039448, exon 2 of 2) 465 FBgn0039448 FBgn0039448 FBtr0085049 TwdlQ protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2844 chr2L 18097349 18097464 + 12 NA exon (FBgn0032664, exon 1 of 1) protein_coding-exon (FBgn0032664, exon 1 of 1) 838 FBgn0032664 FBgn0032664 FBtr0081033 CG5755 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1216 chr2L 8821488 8821595 + 12 NA Intergenic Intergenic -4084 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6776 chr3L 944604 944793 + 12 NA intron (FBgn0264574, intron 2 of 14) protein_coding-intron (FBgn0264574, intron 2 of 12) -14962 FBgn0264574 FBgn0264574 FBtr0333507 Glut1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8706 chr3L 22706549 22706623 + 12 NA TTS (FBgn0037182) protein_coding-TTS (FBgn0037182) 1331 FBgn0037181 FBgn0037181 FBtr0330172 CG11370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9822 chr3R 7273771 7273910 + 12 NA exon (FBgn0051374, exon 2 of 9) protein_coding-exon (FBgn0051374, exon 2 of 9) 3015 FBgn0051374 FBgn0051374 FBtr0082400 sals protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4928 chr2R 9264835 9265017 + 12 NA exon (FBgn0033830, exon 1 of 2) protein_coding-exon (FBgn0033830, exon 1 of 2) 293 FBgn0033830 FBgn0033830 FBtr0087720 CG10814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5905 chr2R 17769403 17769457 + 12 NA exon (FBgn0025573, exon 1 of 1) protein_coding-exon (FBgn0025573, exon 1 of 1) 608 FBgn0025573 FBgn0025573 FBtr0071734 PpN58A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1681 chr2L 12661445 12661611 + 12 NA intron (FBgn0004394, intron 2 of 4) protein_coding-intron (FBgn0004394, intron 2 of 4) 8186 FBgn0032442 FBgn0032442 FBtr0080412 CG15485 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13570 chrX 6133132 6133285 + 12 NA exon (FBgn0029851, exon 3 of 5) protein_coding-exon (FBgn0029851, exon 3 of 5) 1858 FBgn0029851 FBgn0029851 FBtr0112954 CG14445 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8050 chr3L 14438415 14438540 + 12 NA intron (FBgn0087007, intron 1 of 6) protein_coding-intron (FBgn0087007, intron 4 of 8) 34751 FBgn0036423 FBgn0036423 FBtr0333040 CG3919 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13253 chrU 4478342 4478457 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5895 chr2R 17675743 17675906 + 12 NA Intergenic Intergenic 3336 FBgn0034660 FBgn0034660 FBtr0071745 lox2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1873 chr2L 14047877 14048032 + 12 NA exon (FBgn0260011, exon 1 of 1) protein_coding-exon (FBgn0260011, exon 1 of 1) 372 FBgn0260011 FBgn0260011 FBtr0080592 nimC4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8440 chr3L 17787455 17787551 + 12 NA exon (FBgn0261998, exon 5 of 11) protein_coding-exon (FBgn0261998, exon 5 of 11) -2917 FBgn0261997 FBgn0261997 FBtr0303827 CG42815 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6488 chr2RHet 1661572 1661626 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_11750 chr3R 22822485 22822674 + 12 NA promoter-TSS (FBgn0004842) protein_coding-promoter-TSS (FBgn0004842) -123 FBgn0004842 FBgn0004842 FBtr0085100 NepYr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3536 chr2L 21959770 21959855 + 12 NA Intergenic Intergenic 33121 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10498 chr3R 12420868 12420962 + 12 NA exon (FBgn0038447, exon 1 of 4) protein_coding-exon (FBgn0038447, exon 1 of 4) 779 FBgn0038447 FBgn0038447 FBtr0083327 CG14892 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3371 chr2L 21287834 21287919 + 12 NA exon (FBgn0032940, exon 9 of 12) protein_coding-exon (FBgn0032940, exon 9 of 12) -3603 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_6354 chr2RHet 496126 496270 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1594 chr2L 11922077 11922212 + 12 NA intron (FBgn0259225, intron 2 of 9) protein_coding-intron (FBgn0259225, intron 2 of 9) -12361 FBgn0026392 FBgn0026392 FBtr0080278 Or33a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2751 chr2L 17795654 17795921 + 12 NA intron (FBgn0262018, intron 11 of 14) protein_coding-intron (FBgn0262018, intron 10 of 13) 3375 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10716 chr3R 13853439 13853539 + 12 NA Intergenic Intergenic 4060 FBgn0038565 FBgn0038565 FBtr0083540 CG7794 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4788 chr2R 8028095 8028169 + 12 NA promoter-TSS (FBgn0027495) protein_coding-promoter-TSS (FBgn0027495) -4 FBgn0027495 FBgn0027495 FBtr0087983 CG8378 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12564 chr3R 26686276 26686397 + 12 NA Intergenic Intergenic -6909 FBgn0039805 FBgn0039805 FBtr0085710 Cpr100A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9503 chr3R 4517803 4517979 + 12 NA exon (FBgn0001180, exon 2 of 2) protein_coding-exon (FBgn0001180, exon 2 of 2) 2431 FBgn0001180 FBgn0001180 FBtr0081951 hb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7385 chr3L 8286786 8286943 + 12 NA intron (FBgn0035865, intron 1 of 3) protein_coding-intron (FBgn0035865, intron 1 of 3) 1563 FBgn0035865 FBgn0035865 FBtr0332135 CG7201 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5578 chr2R 15104295 15104416 + 12 NA exon (FBgn0263395, exon 5 of 15) protein_coding-exon (FBgn0263395, exon 5 of 15) -10480 FBgn0034422 FBgn0034422 FBtr0086505 CG7137 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7044 chr3L 4427180 4427264 + 12 NA TTS (FBgn0035543) protein_coding-TTS (FBgn0035543) -2127 FBgn0000038 FBgn0000038 FBtr0073300 nAcRbeta-64B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_307 chr2L 1586708 1586901 + 12 NA intron (FBgn0031347, intron 1 of 1) protein_coding-intron (FBgn0261509, intron 2 of 10) 351 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7623 chr3L 10923637 10923697 + 12 NA Intergenic Intergenic -13889 FBgn0054050 FBgn0054050 FBtr0100105 CG34050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4498 chr2R 5948213 5948372 + 12 NA exon (FBgn0262169, exon 4 of 11) protein_coding-exon (FBgn0262169, exon 4 of 11) 5768 FBgn0033479 FBgn0033479 FBtr0088431 CG2292 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_488 chr2L 3322424 3322502 + 12 NA exon (FBgn0031520, exon 5 of 7) protein_coding-exon (FBgn0031520, exon 5 of 7) -1771 FBgn0053281 FBgn0053281 FBtr0077584 CG33281 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1046 chr2L 8062297 8062468 + 12 NA exon (FBgn0011230, exon 6 of 13) protein_coding-exon (FBgn0011230, exon 6 of 13) 9242 FBgn0011230 FBgn0011230 FBtr0333088 poe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6420 chr2RHet 867626 867763 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9446 chr3R 4124221 4124382 + 12 NA exon (FBgn0037565, exon 5 of 13) protein_coding-exon (FBgn0037565, exon 5 of 13) 2399 FBgn0037565 FBgn0037565 FBtr0081864 CG9626 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_742 chr2L 5364399 5364453 + 12 NA TTS (FBgn0016920) protein_coding-TTS (FBgn0016920) 16648 FBgn0262097 FBgn0262097 FBtr0310549 CG42850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2661 chr2L 17323616 17323713 + 12 NA Intergenic Intergenic -11844 FBgn0085199 FBgn0085199 FBtr0112361 CG34170 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7881 chr3L 13201113 13201167 + 12 NA Intergenic Intergenic -3174 FBgn0052129 FBgn0052129 FBtr0075828 tRNA:CR32129 tRNA Nup98-S2-pascual-garcia2017_R1_peak_13154 chrU 1246691 1246903 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8046 chr3L 14397602 14397668 + 12 NA exon (FBgn0003459, exon 2 of 2) protein_coding-exon (FBgn0003459, exon 2 of 2) -1810 FBgn0036422 FBgn0036422 FBtr0075729 CG3868 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1116 chr2L 8604687 8604833 + 12 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -10271 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10608 chr3R 13151099 13151210 + 12 NA intron (FBgn0038498, intron 5 of 6) protein_coding-intron (FBgn0038498, intron 5 of 6) 37644 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8260 chr3L 16416575 16416729 + 12 NA exon (FBgn0261799, exon 5 of 5) protein_coding-exon (FBgn0261799, exon 5 of 5) 3955 FBgn0053158 FBgn0053158 FBtr0075390 CG33158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11007 chr3R 15778387 15778638 + 12 NA intron (FBgn0038755, intron 2 of 5) protein_coding-intron (FBgn0038755, intron 2 of 5) 4320 FBgn0038756 FBgn0038756 FBtr0083823 CG4783 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1895 chr2L 14164081 14164156 + 12 NA promoter-TSS (FBgn0263037) protein_coding-promoter-TSS (FBgn0263037) -896 FBgn0263037 FBgn0263037 FBtr0306928 CG43332 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6017 chr2R 18791840 18792006 + 12 NA exon (FBgn0034797, exon 2 of 11) protein_coding-exon (FBgn0034797, exon 2 of 11) 8227 FBgn0034797 FBgn0034797 FBtr0304795 nahoda protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12559 chr3R 26679414 26679705 + 12 NA exon (FBgn0003720, exon 2 of 2) protein_coding-exon (FBgn0003720, exon 2 of 2) 1522 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3471 chr2L 21801372 21801453 + 12 NA Intergenic Intergenic -5982 FBgn0051612 FBgn0051612 FBtr0300999 CG31612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4478 chr2R 5705781 5705892 + 12 NA exon (FBgn0040093, exon 2 of 2) protein_coding-exon (FBgn0040093, exon 2 of 2) 1031 FBgn0040093 FBgn0040093 FBtr0088476 lectin-46Ca protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11444 chr3R 20810016 20810159 + 12 NA promoter-TSS (FBgn0039257) protein_coding-promoter-TSS (FBgn0039257) -19 FBgn0039257 FBgn0039257 FBtr0305667 tnc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10664 chr3R 13553836 13553972 + 12 NA intron (FBgn0016650, intron 1 of 16) protein_coding-intron (FBgn0016650, intron 1 of 16) 2656 FBgn0016650 FBgn0016650 FBtr0083510 Lgr1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12153 chr3R 24473028 24473098 + 12 NA Intergenic Intergenic 3139 FBgn0051050 FBgn0051050 FBtr0085317 CG31050 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3756 chr2L 22584326 22584488 + 12 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 60120 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6623 chr2RHet 2241677 2241894 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7449 chr3L 8805101 8805217 + 12 NA TTS (FBgn0035933) protein_coding-TTS (FBgn0035933) 1664 FBgn0035933 FBgn0035933 FBtr0076582 CG13309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3038 chr2L 19500758 19500897 + 12 NA exon (FBgn0040268, exon 4 of 4) protein_coding-exon (FBgn0040268, exon 4 of 4) 2659 FBgn0040268 FBgn0040268 FBtr0081246 Top3alpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12322 chr3R 25235053 25235107 + 12 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -70340 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2695 chr2L 17574141 17574253 + 12 NA promoter-TSS (FBgn0262400) pre_miRNA-promoter-TSS (FBgn0262400) -477 FBgn0262400 FBgn0262400 FBtr0304303 mir-287 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_904 chr2L 6636706 6636809 + 12 NA exon (FBgn0051635, exon 7 of 7) protein_coding-exon (FBgn0051635, exon 7 of 7) -4350 FBgn0051634 FBgn0051634 FBtr0079327 Oatp26F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1369 chr2L 9662939 9663065 + 12 NA Intergenic Intergenic 6402 FBgn0053299 FBgn0053299 FBtr0303875 CG33299 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7207 chr3L 6591264 6591431 + 12 NA exon (FBgn0002926, exon 7 of 15) protein_coding-exon (FBgn0002926, exon 7 of 15) 5119 FBgn0002926 FBgn0002926 FBtr0076984 ndl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7687 chr3L 11755922 11756080 + 12 NA intron (FBgn0036202, intron 1 of 7) protein_coding-intron (FBgn0036202, intron 1 of 7) 2897 FBgn0036202 FBgn0036202 FBtr0113164 CG6024 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10125 chr3R 9681880 9682044 + 12 NA promoter-TSS (FBgn0038186) protein_coding-promoter-TSS (FBgn0038186) -786 FBgn0038186 FBgn0038186 FBtr0082881 CG14362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7612 chr3L 10749837 10749987 + 12 NA Intergenic Intergenic -15180 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3918 chr2R 394008 394149 + 12 NA Intergenic Intergenic -3425 FBgn0050260 FBgn0050260 FBtr0100840 tRNA:CR30260 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5913 chr2R 17848289 17848429 + 12 NA Intergenic Intergenic -3319 FBgn0085398 FBgn0085398 FBtr0112594 CG34369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4280 chr2R 4386851 4386996 + 12 NA intron (FBgn0050361, intron 2 of 18) protein_coding-intron (FBgn0050361, intron 2 of 18) 27435 FBgn0033297 FBgn0033297 FBtr0088752 Mal-A8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8904 chr3LHet 1403037 1403171 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7805 chr3L 12592398 12592581 + 12 NA Intergenic Intergenic -10242 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11481 chr3R 21677273 21677346 + 12 NA promoter-TSS (FBgn0039379) protein_coding-promoter-TSS (FBgn0039379) -67 FBgn0039379 FBgn0039379 FBtr0084907 CG5886 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7346 chr3L 7780118 7780286 + 12 NA intron (FBgn0052369, intron 2 of 6) protein_coding-intron (FBgn0052369, intron 1 of 5) -11499 FBgn0023076 FBgn0023076 FBtr0100134 Clk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2906 chr2L 18534988 18535105 + 12 NA exon (FBgn0085370, exon 14 of 17) protein_coding-exon (FBgn0085370, exon 14 of 17) 17553 FBgn0032685 FBgn0032685 FBtr0081069 CG10211 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3376 chr2L 21299272 21299402 + 12 NA intron (FBgn0032940, intron 4 of 11) protein_coding-intron (FBgn0032940, intron 4 of 11) 3023 FBgn0264556 FBgn0264556 FBtr0081511 Gr39a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12106 chr3R 24273959 24274050 + 12 NA intron (FBgn0039584, intron 2 of 6) protein_coding-intron (FBgn0039584, intron 2 of 6) 30074 FBgn0039584 FBgn0039584 FBtr0085289 beat-VI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7496 chr3L 9368954 9369008 + 12 NA TTS (FBgn0001225) protein_coding-TTS (FBgn0001225) 451 FBgn0035982 FBgn0035982 FBtr0076452 CG4461 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2191 chr2L 15199741 15199844 + 12 NA intron (FBgn0028888, intron 1 of 5) protein_coding-intron (FBgn0028888, intron 1 of 5) 617 FBgn0028888 FBgn0028888 FBtr0305559 CG4168 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13624 chrX 9035378 9035538 + 12 NA Intergenic Intergenic -1127 FBgn0030091 FBgn0030091 FBtr0071299 CG7065 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1063 chr2L 8277674 8277759 + 12 NA promoter-TSS (FBgn0003502) protein_coding-promoter-TSS (FBgn0003502) -13011 FBgn0011902 FBgn0011902 FBtr0079596 tRNA:K5:29A tRNA Nup98-S2-pascual-garcia2017_R1_peak_8698 chr3L 22394806 22394860 + 12 NA intron (FBgn0004449, intron 1 of 11) protein_coding-intron (FBgn0004449, intron 1 of 8) 6130 FBgn0004449 FBgn0004449 FBtr0330159 Ten-m protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5855 chr2R 17449469 17449563 + 12 NA exon (FBgn0034636, exon 4 of 5) protein_coding-exon (FBgn0034636, exon 4 of 5) 14024 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12522 chr3R 26261169 26261240 + 12 NA TTS (FBgn0039769) protein_coding-TTS (FBgn0039769) 3418 FBgn0039769 FBgn0039769 FBtr0085644 CG15534 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10162 chr3R 9931921 9932116 + 12 NA exon (FBgn0038202, exon 2 of 3) protein_coding-exon (FBgn0038202, exon 2 of 3) 2025 FBgn0038202 FBgn0038202 FBtr0330081 CG12402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5233 chr2R 11834828 11835004 + 12 NA TTS (FBgn0034053) protein_coding-TTS (FBgn0034053) 1524 FBgn0263576 FBgn0263576 FBtr0309737 mir-4919 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1944 chr2L 14349361 14349537 + 12 NA promoter-TSS (FBgn0028530) protein_coding-promoter-TSS (FBgn0028530) -631 FBgn0028530 FBgn0028530 FBtr0080641 mTTF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10387 chr3R 11777112 11777184 + 12 NA promoter-TSS (FBgn0051088) protein_coding-promoter-TSS (FBgn0051088) -483 FBgn0051088 FBgn0051088 FBtr0083241 CG31088 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5860 chr2R 17453321 17453389 + 12 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 10185 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8414 chr3L 17604116 17604351 + 12 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 8192 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6026 chr2R 18871237 18871361 + 12 NA TTS (FBgn0052833) protein_coding-TTS (FBgn0052833) 499 FBgn0052834 FBgn0052834 FBtr0303210 CG32834 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3463 chr2L 21782187 21782292 + 12 NA exon (FBgn0032964, exon 1 of 1) protein_coding-exon (FBgn0032964, exon 1 of 1) 1826 FBgn0032964 FBgn0032964 FBtr0085909 CG11630 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10398 chr3R 11897421 11897478 + 12 NA intron (FBgn0026059, intron 4 of 7) protein_coding-intron (FBgn0026059, intron 14 of 17) -4215 FBgn0038397 FBgn0038397 FBtr0083235 CG10185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5440 chr2R 13877032 13877156 + 12 NA exon (FBgn0034286, exon 2 of 7) protein_coding-exon (FBgn0034286, exon 2 of 7) 18276 FBgn0034286 FBgn0034286 FBtr0300215 dpr13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5267 chr2R 12191535 12191662 + 12 NA Intergenic Intergenic -5474 FBgn0085428 FBgn0085428 FBtr0112650 Nox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4408 chr2R 5229834 5229989 + 12 NA intron (FBgn0033403, intron 2 of 3) protein_coding-intron (FBgn0033403, intron 2 of 3) -2943 FBgn0033404 FBgn0033404 FBtr0088503 Or45a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4759 chr2R 7841314 7841390 + 12 NA intron (FBgn0033668, intron 2 of 9) protein_coding-intron (FBgn0033668, intron 2 of 8) 14363 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5793 chr2R 16958307 16958514 + 12 NA exon (FBgn0034583, exon 3 of 3) protein_coding-exon (FBgn0034583, exon 3 of 3) -1597 FBgn0034582 FBgn0034582 FBtr0071542 Cht9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4461 chr2R 5643543 5643679 + 12 NA TTS (FBgn0033442) protein_coding-TTS (FBgn0033442) 1962 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3053 chr2L 19622269 19622450 + 12 NA intron (FBgn0000464, intron 3 of 17) protein_coding-intron (FBgn0000464, intron 1 of 16) 35736 FBgn0000464 FBgn0000464 FBtr0305950 Lar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_503 chr2L 3407831 3407918 + 12 NA exon (FBgn0031530, exon 3 of 8) protein_coding-exon (FBgn0031530, exon 3 of 8) -2736 FBgn0031531 FBgn0031531 FBtr0077590 CG8840 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6982 chr3L 3208376 3208452 + 12 NA promoter-TSS (FBgn0052269) protein_coding-promoter-TSS (FBgn0052269) -271 FBgn0052269 FBgn0052269 FBtr0332871 CG32269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2664 chr2L 17337469 17337571 + 12 NA Intergenic Intergenic 17148 FBgn0262884 FBgn0262884 FBtr0306294 CR43239 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_883 chr2L 6408255 6408359 + 12 NA exon (FBgn0259714, exon 2 of 10) protein_coding-exon (FBgn0259714, exon 2 of 10) 2999 FBgn0259714 FBgn0259714 FBtr0299967 CG42368 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8480 chr3L 18132981 18133080 + 12 NA exon (FBgn0020300, exon 1 of 3) protein_coding-exon (FBgn0020300, exon 1 of 3) 528 FBgn0020300 FBgn0020300 FBtr0075126 gk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11714 chr3R 22574105 22574184 + 12 NA Intergenic Intergenic 10796 FBgn0039454 FBgn0039454 FBtr0085043 CG14247 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5716 chr2R 16176445 16176600 + 12 NA promoter-TSS (FBgn0026136) protein_coding-promoter-TSS (FBgn0026136) -610 FBgn0026136 FBgn0026136 FBtr0086278 CkIIbeta2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9803 chr3R 7149354 7149521 + 12 NA Intergenic Intergenic -9463 FBgn0004595 FBgn0004595 FBtr0304607 pros protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11707 chr3R 22553757 22553926 + 12 NA promoter-TSS (FBgn0039452) protein_coding-promoter-TSS (FBgn0039452) -424 FBgn0039452 FBgn0039452 FBtr0100553 CG14245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6393 chr2RHet 670684 670799 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_6976 chr3L 3095156 3095292 + 12 NA promoter-TSS (FBgn0052288) tRNA-promoter-TSS (FBgn0052288) -513 FBgn0052288 FBgn0052288 FBtr0073018 tRNA:CR32288 tRNA Nup98-S2-pascual-garcia2017_R1_peak_12149 chr3R 24419641 24419839 + 12 NA exon (FBgn0263388, exon 1 of 1) protein_coding-exon (FBgn0263388, exon 1 of 1) 530 FBgn0263388 FBgn0263388 FBtr0309076 CG43440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_82 chr2L 769277 769331 + 12 NA Intergenic Intergenic -4243 FBgn0031276 FBgn0031276 FBtr0078003 CG12506 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12761 chr3R 27534658 27535035 + 12 NA promoter-TSS (FBgn0261583) protein_coding-promoter-TSS (FBgn0261583) -151 FBgn0054046 FBgn0054046 FBtr0308935 CR34046 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7399 chr3L 8379498 8379552 + 12 NA exon (FBgn0001253, exon 5 of 7) protein_coding-exon (FBgn0001253, exon 5 of 7) -5115 FBgn0035886 FBgn0035886 FBtr0076608 Jon66Ci protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12707 chr3R 27224327 27224436 + 12 NA exon (FBgn0019990, exon 7 of 10) protein_coding-exon (FBgn0019990, exon 7 of 10) 3001 FBgn0019990 FBgn0019990 FBtr0085787 Gcn2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4734 chr2R 7714951 7715169 + 12 NA TTS (FBgn0033653) protein_coding-TTS (FBgn0033653) 2190 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12743 chr3R 27456094 27456239 + 12 NA intron (FBgn0039862, intron 1 of 3) protein_coding-intron (FBgn0039862, intron 1 of 3) 8308 FBgn0039862 FBgn0039862 FBtr0330107 kek6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12477 chr3R 25753664 25753786 + 12 NA TTS (FBgn0051202) protein_coding-TTS (FBgn0051202) 748 FBgn0039723 FBgn0039723 FBtr0331355 CG15522 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11671 chr3R 22457581 22457792 + 12 NA promoter-TSS (FBgn0039441) protein_coding-promoter-TSS (FBgn0039441) 91 FBgn0039441 FBgn0039441 FBtr0085031 TwdlN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12111 chr3R 24294509 24294655 + 12 NA intron (FBgn0039584, intron 5 of 6) protein_coding-intron (FBgn0039584, intron 5 of 6) -15697 FBgn0039585 FBgn0039585 FBtr0085290 CG1894 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10749 chr3R 14062300 14062745 + 12 NA exon (FBgn0011701, exon 1 of 2) protein_coding-exon (FBgn0011701, exon 1 of 2) 606 FBgn0011701 FBgn0011701 FBtr0083564 repo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11309 chr3R 18179333 18179387 + 12 NA intron (FBgn0038946, intron 4 of 5) protein_coding-intron (FBgn0038946, intron 3 of 4) 1942 FBgn0038946 FBgn0038946 FBtr0084205 rdhB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6571 chr2RHet 1954074 1954174 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2577 chr2L 17009518 17009652 + 12 NA Intergenic Intergenic 3469 FBgn0032624 FBgn0032624 FBtr0080955 CG6304 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5223 chr2R 11788533 11788656 + 12 NA intron (FBgn0264089, intron 1 of 20) protein_coding-intron (FBgn0264089, intron 1 of 19) -4662 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_256 chr2L 1444302 1444356 + 12 NA Intergenic Intergenic 1603 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13777 chrX 16829193 16829323 + 12 NA exon (FBgn0027556, exon 5 of 6) protein_coding-exon (FBgn0027556, exon 5 of 6) 5601 FBgn0030805 FBgn0030805 FBtr0074418 wus protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1612 chr2L 12159752 12159894 + 12 NA intron (FBgn0051760, intron 3 of 12) protein_coding-intron (FBgn0051760, intron 4 of 13) -1972 FBgn0051861 FBgn0051861 FBtr0302986 CG31861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9672 chr3R 6194135 6194281 + 12 NA intron (FBgn0020379, intron 3 of 10) protein_coding-intron (FBgn0020379, intron 3 of 10) 9582 FBgn0020379 FBgn0020379 FBtr0305997 Rfx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7440 chr3L 8775711 8775949 + 12 NA intron (FBgn0261259, intron 5 of 18) protein_coding-intron (FBgn0261259, intron 3 of 16) 5815 FBgn0035926 FBgn0035926 FBtr0076591 CG5804 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11833 chr3R 23212284 23212501 + 12 NA intron (FBgn0016061, intron 14 of 16) protein_coding-intron (FBgn0016061, intron 14 of 16) -16805 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_6156 chr2R 20044843 20045034 + 12 NA TTS (FBgn0260775) protein_coding-TTS (FBgn0260775) 1897 FBgn0260770 FBgn0260770 FBtr0301274 CG42568 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5024 chr2R 10087393 10087799 + 12 NA exon (FBgn0033911, exon 2 of 2) protein_coding-exon (FBgn0033911, exon 2 of 2) 1103 FBgn0033911 FBgn0033911 FBtr0087577 VGAT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7592 chr3L 10702083 10702276 + 12 NA Intergenic Intergenic -12202 FBgn0036101 FBgn0036101 FBtr0089571 NijA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9859 chr3R 7664392 7664509 + 12 NA intron (FBgn0037956, intron 1 of 2) protein_coding-intron (FBgn0037956, intron 1 of 2) -16495 FBgn0037955 FBgn0037955 FBtr0082521 CG6950 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9726 chr3R 6520516 6520711 + 12 NA exon (FBgn0262717, exon 8 of 8) protein_coding-exon (FBgn0262717, exon 8 of 8) -1756 FBgn0037822 FBgn0037822 FBtr0082267 CG14683 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_967 chr2L 7145759 7145968 + 12 NA intron (FBgn0085407, intron 1 of 5) protein_coding-intron (FBgn0085407, intron 1 of 5) -12336 FBgn0085407 FBgn0085407 FBtr0301525 Pvf3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3478 chr2L 21820916 21821480 + 12 NA Intergenic Intergenic -7395 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10407 chr3R 11911789 11912049 + 12 NA exon (FBgn0038398, exon 3 of 3) protein_coding-exon (FBgn0038398, exon 3 of 3) 692 FBgn0038398 FBgn0038398 FBtr0083225 sxe2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_253 chr2L 1417370 1417497 + 12 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 3016 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6854 chr3L 1679428 1679526 + 12 NA intron (FBgn0035260, intron 1 of 3) protein_coding-intron (FBgn0035260, intron 1 of 3) -6750 FBgn0035256 FBgn0035256 FBtr0072803 CG13930 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3587 chr2L 22049033 22049259 + 12 NA Intergenic Intergenic 5099 FBgn0085202 FBgn0085202 FBtr0112364 CG34173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10468 chr3R 12244099 12244153 + 12 NA Intergenic Intergenic 6656 FBgn0051497 FBgn0051497 FBtr0083317 tRNA:CR31497 tRNA Nup98-S2-pascual-garcia2017_R1_peak_7230 chr3L 6795578 6795742 + 12 NA Intergenic Intergenic 12402 FBgn0086680 FBgn0086680 FBtr0330059 vvl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1370 chr2L 9670488 9670612 + 12 NA Intergenic Intergenic 13950 FBgn0053299 FBgn0053299 FBtr0303875 CG33299 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1207 chr2L 8805878 8805954 + 12 NA Intergenic Intergenic -3484 FBgn0261629 FBgn0261629 FBtr0302994 CG42712 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1438 chr2L 10566661 10566715 + 12 NA promoter-TSS (FBgn0032268) protein_coding-promoter-TSS (FBgn0032268) -602 FBgn0032268 FBgn0032268 FBtr0080098 CG6138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10677 chr3R 13604003 13604093 + 12 NA exon (FBgn0262562, exon 5 of 17) protein_coding-exon (FBgn0262562, exon 5 of 17) -15845 FBgn0038542 FBgn0038542 FBtr0083532 TyrR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4565 chr2R 6339428 6339490 + 12 NA exon (FBgn0033524, exon 7 of 14) protein_coding-exon (FBgn0033524, exon 7 of 14) 6938 FBgn0033524 FBgn0033524 FBtr0088312 Cyp49a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11112 chr3R 16356578 16356646 + 12 NA Intergenic Intergenic 3814 FBgn0262146 FBgn0262146 FBtr0304129 MtnE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1489 chr2L 11077020 11077156 + 12 NA intron (FBgn0032336, intron 2 of 3) protein_coding-intron (FBgn0032336, intron 2 of 3) 1575 FBgn0263971 FBgn0263971 FBtr0329904 CG43725 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12792 chr3R 27704704 27704850 + 12 NA intron (FBgn0011224, intron 2 of 10) protein_coding-intron (FBgn0011224, intron 5 of 13) 53211 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10124 chr3R 9674354 9674485 + 12 NA Intergenic Intergenic 6757 FBgn0038186 FBgn0038186 FBtr0082881 CG14362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6064 chr2R 19146848 19147049 + 12 NA Intergenic Intergenic 6109 FBgn0034838 FBgn0034838 FBtr0072048 CG12782 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3561 chr2L 22000755 22000893 + 12 NA Intergenic Intergenic -7891 FBgn0032969 FBgn0032969 FBtr0308090 CG2528 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1951 chr2L 14371608 14371677 + 12 NA Intergenic Intergenic 9528 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13550 chrX 5611756 5611901 + 12 NA promoter-TSS (FBgn0053080) protein_coding-promoter-TSS (FBgn0053080) -4268 FBgn0053080 FBgn0053080 FBtr0070845 CG33080 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10866 chr3R 14839008 14839099 + 12 NA exon (FBgn0026239, exon 4 of 5) protein_coding-exon (FBgn0026239, exon 4 of 5) 10691 FBgn0038672 FBgn0038672 FBtr0083719 CG6005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3675 chr2L 22278321 22278415 + 12 NA Intergenic Intergenic 28490 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1374 chr2L 9743080 9743235 + 12 NA exon (FBgn0028704, exon 2 of 8) protein_coding-exon (FBgn0028704, exon 2 of 8) 3326 FBgn0028704 FBgn0028704 FBtr0079928 Nckx30C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_212 chr2L 1334308 1334446 + 12 NA exon (FBgn0031331, exon 1 of 2) protein_coding-exon (FBgn0031331, exon 1 of 2) 132 FBgn0031331 FBgn0031331 FBtr0305552 CG5440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8870 chr3LHet 917611 917706 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1885 chr2L 14105632 14105817 + 12 NA exon (FBgn0028904, exon 3 of 3) protein_coding-exon (FBgn0028904, exon 3 of 3) 1241 FBgn0028904 FBgn0028904 FBtr0080596 CG16879 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_389 chr2L 2406413 2406473 + 12 NA exon (FBgn0031424, exon 6 of 9) protein_coding-exon (FBgn0031424, exon 6 of 9) 8851 FBgn0031426 FBgn0031426 FBtr0307079 CG18641 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_242 chr2L 1403152 1403517 + 12 NA intron (FBgn0002543, intron 1 of 13) protein_coding-intron (FBgn0002543, intron 1 of 13) 17115 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3563 chr2L 22008282 22008528 + 12 NA Intergenic Intergenic -6826 FBgn0051693 FBgn0051693 FBtr0100262 CG31693 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_145 chr2L 1011228 1011297 + 12 NA TTS (FBgn0031294) protein_coding-TTS (FBgn0031294) 15628 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1622 chr2L 12268498 12268672 + 12 NA intron (FBgn0000114, intron 2 of 9) protein_coding-intron (FBgn0000114, intron 2 of 11) 60876 FBgn0051759 FBgn0051759 FBtr0290239 CG31759 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4636 chr2R 7154629 7154803 + 12 NA TTS (FBgn0033602) protein_coding-TTS (FBgn0033602) 2085 FBgn0033602 FBgn0033602 FBtr0088114 Cpr47Ee protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8000 chr3L 14096196 14096332 + 12 NA TTS (FBgn0036411) protein_coding-TTS (FBgn0036411) 4954 FBgn0036411 FBgn0036411 FBtr0330178 Sox21a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6171 chr2R 20141083 20141302 + 12 NA promoter-TSS (FBgn0034996) protein_coding-promoter-TSS (FBgn0034996) -976 FBgn0034996 FBgn0034996 FBtr0072264 CG13575 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6683 chr2RHet 3052083 3052137 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12488 chr3R 25855886 25855946 + 12 NA intron (FBgn0026597, intron 1 of 8) protein_coding-intron (FBgn0026597, intron 3 of 12) 2833 FBgn0026597 FBgn0026597 FBtr0300600 Axn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1197 chr2L 8791691 8791856 + 12 NA Intergenic Intergenic -9279 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9298 chr3R 3033715 3033862 + 12 NA exon (FBgn0250845, exon 1 of 2) protein_coding-exon (FBgn0250845, exon 1 of 2) 349 FBgn0250845 FBgn0250845 FBtr0081604 CG1288 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6193 chr2R 20262225 20262444 + 12 NA TTS (FBgn0053537) tRNA-TTS (FBgn0053537) 748 FBgn0053537 FBgn0053537 FBtr0100849 tRNA:N5:60C tRNA Nup98-S2-pascual-garcia2017_R1_peak_11708 chr3R 22555524 22555690 + 12 NA TTS (FBgn0039452) protein_coding-TTS (FBgn0039452) 1342 FBgn0039452 FBgn0039452 FBtr0100553 CG14245 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7975 chr3L 13850588 13850861 + 12 NA exon (FBgn0029167, exon 22 of 26) protein_coding-exon (FBgn0029167, exon 22 of 26) 9281 FBgn0036381 FBgn0036381 FBtr0075801 CG8745 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10972 chr3R 15590347 15590446 + 12 NA TTS (FBgn0024963) protein_coding-TTS (FBgn0024963) 8551 FBgn0038730 FBgn0038730 FBtr0083798 CG6300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4873 chr2R 8833915 8833969 + 12 NA promoter-TSS (FBgn0004512) protein_coding-promoter-TSS (FBgn0004512) -2049 FBgn0004512 FBgn0004512 FBtr0302198 Mdr49 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2809 chr2L 17981089 17981165 + 12 NA exon (FBgn0023096, exon 5 of 25) protein_coding-exon (FBgn0023096, exon 5 of 25) 1345 FBgn0023096 FBgn0023096 FBtr0273418 btv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8536 chr3L 18956397 18956451 + 12 NA Intergenic Intergenic 12695 FBgn0036834 FBgn0036834 FBtr0075023 CG6836 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9669 chr3R 6121209 6121343 + 12 NA exon (FBgn0262617, exon 7 of 13) protein_coding-exon (FBgn0262617, exon 7 of 13) 4918 FBgn0262617 FBgn0262617 FBtr0305352 CG43143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4510 chr2R 6084289 6084361 + 12 NA TTS (FBgn0085250) protein_coding-TTS (FBgn0085250) 2871 FBgn0085250 FBgn0085250 FBtr0299834 CG34221 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13091 chrU 195543 195637 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4892 chr2R 8941780 8941916 + 12 NA Intergenic Intergenic -4725 FBgn0033789 FBgn0033789 FBtr0087796 CG13324 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11910 chr3R 23493708 23493762 + 12 NA exon (FBgn0039536, exon 14 of 29) protein_coding-exon (FBgn0039536, exon 14 of 29) 5574 FBgn0039536 FBgn0039536 FBtr0330112 CG18437 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10286 chr3R 11220527 11220681 + 12 NA intron (FBgn0262483, intron 12 of 12) protein_coding-intron (FBgn0262483, intron 12 of 13) 10623 FBgn0038337 FBgn0038337 FBtr0083106 CG6125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7840 chr3L 12878864 12878982 + 12 NA exon (FBgn0036321, exon 1 of 1) protein_coding-exon (FBgn0036321, exon 1 of 1) 771 FBgn0036321 FBgn0036321 FBtr0075868 CG14120 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3806 chr2L 22696680 22696823 + 12 NA Intergenic Intergenic -5743 FBgn0058439 FBgn0058439 FBtr0111233 CG40439 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_843 chr2L 6013874 6013953 + 12 NA exon (FBgn0001170, exon 2 of 3) protein_coding-exon (FBgn0001170, exon 2 of 3) -1575 FBgn0031762 FBgn0031762 FBtr0079229 CG9098 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6376 chr2RHet 577944 578121 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5494 chr2R 14355340 14355503 + 12 NA exon (FBgn0028496, exon 10 of 19) protein_coding-exon (FBgn0028496, exon 10 of 19) -13454 FBgn0034352 FBgn0034352 FBtr0086722 CG17669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_26 chr2L 339376 339544 + 12 NA intron (FBgn0004611, intron 10 of 16) protein_coding-intron (FBgn0004611, intron 10 of 16) -7125 FBgn0051921 FBgn0051921 FBtr0078096 CG31921 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11520 chr3R 21796480 21796614 + 12 NA Intergenic Intergenic -1747 FBgn0259146 FBgn0259146 FBtr0299575 CG42261 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9315 chr3R 3114309 3114363 + 12 NA TTS (FBgn0045843) protein_coding-TTS (FBgn0045843) 2652 FBgn0045843 FBgn0045843 FBtr0081581 RacGAP84C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8230 chr3L 16249619 16249750 + 12 NA exon (FBgn0036584, exon 1 of 1) protein_coding-exon (FBgn0036584, exon 1 of 1) 607 FBgn0036584 FBgn0036584 FBtr0075481 CG13054 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2489 chr2L 16567320 16567484 + 12 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -17443 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_587 chr2L 4131602 4131762 + 12 NA Intergenic Intergenic 9961 FBgn0014033 FBgn0014033 FBtr0077467 Sr-CI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_321 chr2L 1624700 1624827 + 12 NA Intergenic Intergenic -10581 FBgn0021906 FBgn0021906 FBtr0310021 RFeSP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10935 chr3R 15416590 15416758 + 12 NA intron (FBgn0260003, intron 29 of 35) protein_coding-intron (FBgn0260003, intron 29 of 34) 4756 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_570 chr2L 3940335 3940431 + 12 NA intron (FBgn0051774, intron 3 of 9) protein_coding-intron (FBgn0051774, intron 3 of 8) -26095 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5685 chr2R 15978652 15978738 + 12 NA Intergenic Intergenic -20321 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10454 chr3R 12204166 12204233 + 12 NA exon (FBgn0003513, exon 6 of 8) protein_coding-exon (FBgn0003513, exon 6 of 8) -7944 FBgn0038423 FBgn0038423 FBtr0300678 CG10317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5849 chr2R 17440114 17440435 + 12 NA intron (FBgn0003731, intron 1 of 4) protein_coding-intron (FBgn0003731, intron 1 of 4) 5200 FBgn0003731 FBgn0003731 FBtr0071654 Egfr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9074 chr3R 1403773 1403839 + 12 NA exon (FBgn0023023, exon 9 of 10) protein_coding-exon (FBgn0023023, exon 9 of 10) 6976 FBgn0023023 FBgn0023023 FBtr0114453 CRMP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5656 chr2R 15820573 15820637 + 12 NA Intergenic Intergenic 7444 FBgn0263340 FBgn0263340 FBtr0308772 CR43421 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7286 chr3L 7169297 7169504 + 12 NA intron (FBgn0263218, intron 7 of 20) protein_coding-intron (FBgn0263218, intron 7 of 7) 13617 FBgn0263218 FBgn0263218 FBtr0299546 Dscam2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8075 chr3L 14663348 14663473 + 12 NA exon (FBgn0041604, exon 8 of 8) protein_coding-exon (FBgn0041604, exon 8 of 8) 2127 FBgn0262581 FBgn0262581 FBtr0304960 CG43121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5648 chr2R 15723666 15723831 + 12 NA Intergenic Intergenic 9338 FBgn0034476 FBgn0034476 FBtr0086336 Toll-7 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4458 chr2R 5629328 5629461 + 12 NA intron (FBgn0259678, intron 1 of 8) protein_coding-intron (FBgn0259678, intron 1 of 7) 6229 FBgn0259678 FBgn0259678 FBtr0299929 sqa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3687 chr2L 22323614 22323708 + 12 NA intron (FBgn0039972, intron 1 of 6) protein_coding-intron (FBgn0039972, intron 1 of 6) -16961 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_7446 chr3L 8794883 8795032 + 12 NA promoter-TSS (FBgn0085455) protein_coding-promoter-TSS (FBgn0085455) 307 FBgn0035929 FBgn0035929 FBtr0076589 CG13311 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1045 chr2L 8060106 8060367 + 12 NA exon (FBgn0011230, exon 9 of 13) protein_coding-exon (FBgn0011230, exon 9 of 13) 11388 FBgn0011230 FBgn0011230 FBtr0333088 poe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11517 chr3R 21791818 21791888 + 12 NA exon (FBgn0000206, exon 5 of 6) protein_coding-exon (FBgn0000206, exon 5 of 6) 4137 FBgn0000206 FBgn0000206 FBtr0084949 boss protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12458 chr3R 25665883 25666024 + 12 NA Intergenic Intergenic -1426 FBgn0039709 FBgn0039709 FBtr0085488 Cad99C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10834 chr3R 14640523 14640577 + 12 NA intron (FBgn0038653, intron 1 of 3) protein_coding-intron (FBgn0038653, intron 1 of 2) -22480 FBgn0038652 FBgn0038652 FBtr0083679 CG7720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_188 chr2L 1238420 1238589 + 12 NA Intergenic Intergenic -1534 FBgn0031327 FBgn0031327 FBtr0077920 CG5397 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5451 chr2R 13937225 13937449 + 12 NA promoter-TSS (FBgn0034293) protein_coding-promoter-TSS (FBgn0034293) -107 FBgn0034293 FBgn0034293 FBtr0086810 CG14495 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_453 chr2L 2957879 2957969 + 12 NA intron (FBgn0010263, intron 1 of 7) protein_coding-intron (FBgn0010263, intron 1 of 8) 1013 FBgn0010263 FBgn0010263 FBtr0077640 Rbp9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7831 chr3L 12772185 12772239 + 12 NA promoter-TSS (FBgn0052106) protein_coding-promoter-TSS (FBgn0052106) -396 FBgn0052106 FBgn0052106 FBtr0307888 CG32106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8878 chr3LHet 1050047 1050206 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_1744 chr2L 12941375 12941458 + 12 NA Intergenic Intergenic 15805 FBgn0040506 FBgn0040506 FBtr0310556 ACXE protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5616 chr2R 15514503 15514587 + 12 NA intron (FBgn0003435, intron 2 of 10) protein_coding-intron (FBgn0003435, intron 2 of 9) -8239 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10176 chr3R 10094641 10094813 + 12 NA exon (FBgn0003862, exon 6 of 9) protein_coding-exon (FBgn0003862, exon 6 of 9) -6587 FBgn0038218 FBgn0038218 FBtr0082951 CG14841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7673 chr3L 11671639 11671733 + 12 NA intron (FBgn0052085, intron 1 of 5) protein_coding-intron (FBgn0052085, intron 1 of 5) 1758 FBgn0052085 FBgn0052085 FBtr0076133 CG32085 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3359 chr2L 21240177 21240231 + 12 NA intron (FBgn0261239, intron 2 of 7) protein_coding-intron (FBgn0261239, intron 2 of 4) 2954 FBgn0261239 FBgn0261239 FBtr0081478 Hr39 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13574 chrX 6241012 6241103 + 12 NA promoter-TSS (FBgn0029867) protein_coding-promoter-TSS (FBgn0029867) -79 FBgn0029867 FBgn0029867 FBtr0070905 CG3847 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13306 chrUextra 332767 332851 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7751 chr3L 12283873 12283949 + 12 NA TTS (FBgn0036274) protein_coding-TTS (FBgn0036274) 5312 FBgn0036274 FBgn0036274 FBtr0301071 CG4328 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3015 chr2L 19321152 19321280 + 12 NA Intergenic Intergenic 20910 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10729 chr3R 13907619 13907715 + 12 NA exon (FBgn0038566, exon 1 of 1) protein_coding-exon (FBgn0038566, exon 1 of 1) 824 FBgn0038566 FBgn0038566 FBtr0083541 CG14317 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7832 chr3L 12776449 12776506 + 12 NA promoter-TSS (FBgn0036311) protein_coding-promoter-TSS (FBgn0036311) 73 FBgn0036311 FBgn0036311 FBtr0075924 CG17666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9539 chr3R 4958542 4958686 + 12 NA intron (FBgn0003165, intron 1 of 6) protein_coding-intron (FBgn0003165, intron 8 of 12) 25058 FBgn0003165 FBgn0003165 FBtr0305197 pum protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9569 chr3R 5124053 5124178 + 12 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -23377 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8587 chr3L 20118506 20118657 + 12 NA exon (FBgn0036939, exon 3 of 4) protein_coding-exon (FBgn0036939, exon 3 of 4) 1021 FBgn0036939 FBgn0036939 FBtr0332700 CG7365 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6896 chr3L 2129006 2129081 + 12 NA intron (FBgn0052311, intron 14 of 19) protein_coding-intron (FBgn0052311, intron 15 of 19) -13432 FBgn0086906 FBgn0086906 FBtr0072848 sls protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2325 chr2L 15652362 15652443 + 12 NA exon (FBgn0028863, exon 2 of 13) protein_coding-exon (FBgn0028863, exon 2 of 13) -8639 FBgn0028864 FBgn0028864 FBtr0080756 CG18477 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11619 chr3R 22212883 22212960 + 12 NA Intergenic Intergenic 16457 FBgn0039424 FBgn0039424 FBtr0113295 CG14239 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2264 chr2L 15482880 15483087 + 12 NA Intergenic Intergenic -1785 FBgn0020371 FBgn0020371 FBtr0089699 Tim17b2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7001 chr3L 3530283 3530393 + 12 NA intron (FBgn0005640, intron 1 of 10) protein_coding-intron (FBgn0005640, intron 1 of 10) 14587 FBgn0005640 FBgn0005640 FBtr0110924 Eip63E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2239 chr2L 15404946 15405044 + 12 NA Intergenic Intergenic 20590 FBgn0001983 FBgn0001983 FBtr0080740 wor protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12125 chr3R 24342978 24343111 + 12 NA exon (FBgn0013813, exon 42 of 47) protein_coding-exon (FBgn0013813, exon 42 of 47) 3193 FBgn0051051 FBgn0051051 FBtr0085296 CG31051 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_51 chr2L 700560 700619 + 12 NA intron (FBgn0000497, intron 2 of 11) protein_coding-intron (FBgn0000497, intron 2 of 11) 14379 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12657 chr3R 27014829 27014992 + 12 NA intron (FBgn0051004, intron 4 of 14) protein_coding-intron (FBgn0051004, intron 4 of 15) -4036 FBgn0004389 FBgn0004389 FBtr0085754 bnk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9028 chr3R 983338 983445 + 12 NA intron (FBgn0037295, intron 2 of 5) protein_coding-intron (FBgn0037295, intron 2 of 5) -1943 FBgn0037294 FBgn0037294 FBtr0078773 CG12590 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6019 chr2R 18795536 18795631 + 12 NA intron (FBgn0034797, intron 2 of 11) protein_coding-intron (FBgn0034797, intron 2 of 10) 10706 FBgn0050187 FBgn0050187 FBtr0304796 CG30187 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11752 chr3R 22848474 22848636 + 12 NA exon (FBgn0039475, exon 2 of 2) protein_coding-exon (FBgn0039475, exon 2 of 2) 384 FBgn0039475 FBgn0039475 FBtr0085150 CG6277 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3494 chr2L 21860677 21860754 + 12 NA Intergenic Intergenic 32122 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11860 chr3R 23287752 23287868 + 12 NA Intergenic Intergenic -2101 FBgn0039518 FBgn0039518 FBtr0085182 CG13978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10737 chr3R 13956194 13956397 + 12 NA exon (FBgn0003499, exon 5 of 5) protein_coding-exon (FBgn0003499, exon 5 of 5) -21547 FBgn0038567 FBgn0038567 FBtr0083546 CG14316 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6189 chr2R 20239573 20239731 + 12 NA intron (FBgn0004101, intron 2 of 3) protein_coding-intron (FBgn0004101, intron 2 of 3) 9263 FBgn0004101 FBgn0004101 FBtr0072271 bs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13152 chrU 1228291 1228345 + 12 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_9004 chr3R 802832 802986 + 12 NA Intergenic Intergenic -5078 FBgn0263455 FBgn0263455 FBtr0309311 CR43478 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_11990 chr3R 23858155 23858274 + 12 NA intron (FBgn0085391, intron 2 of 9) protein_coding-intron (FBgn0085391, intron 2 of 9) 5880 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8429 chr3L 17687309 17687399 + 12 NA intron (FBgn0052183, intron 1 of 9) protein_coding-intron (FBgn0052183, intron 1 of 9) 4239 FBgn0052183 FBgn0052183 FBtr0075186 Ccn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8644 chr3L 21485717 21485795 + 12 NA promoter-TSS (FBgn0037087) protein_coding-promoter-TSS (FBgn0037087) 117 FBgn0037086 FBgn0037086 FBtr0078393 CG7202 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1361 chr2L 9595154 9595212 + 12 NA Intergenic Intergenic 5670 FBgn0032132 FBgn0032132 FBtr0114535 CG4382 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_987 chr2L 7333994 7334126 + 12 NA promoter-TSS (FBgn0031902) protein_coding-promoter-TSS (FBgn0031902) -741 FBgn0031902 FBgn0031902 FBtr0303251 Wnt6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6174 chr2R 20180654 20180820 + 12 NA promoter-TSS (FBgn0034999) protein_coding-promoter-TSS (FBgn0034999) -1081 FBgn0263546 FBgn0263546 FBtr0309662 mir-4985 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_683 chr2L 4689794 4689934 + 12 NA TTS (FBgn0031621) protein_coding-TTS (FBgn0031621) 838 FBgn0031622 FBgn0031622 FBtr0077422 CG3251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9634 chr3R 5795475 5795566 + 12 NA intron (FBgn0263097, intron 4 of 6) protein_coding-intron (FBgn0263097, intron 4 of 6) 16262 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11355 chr3R 19091447 19091651 + 12 NA exon (FBgn0004882, exon 10 of 10) protein_coding-exon (FBgn0004882, exon 10 of 10) 4483 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1565 chr2L 11727470 11727524 + 12 NA Intergenic Intergenic -11455 FBgn0032373 FBgn0032373 FBtr0080255 Vha100-5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1976 chr2L 14426034 14426093 + 12 NA promoter-TSS (FBgn0028871) protein_coding-promoter-TSS (FBgn0028871) -932 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9079 chr3R 1539902 1540070 + 12 NA exon (FBgn0004878, exon 3 of 4) protein_coding-exon (FBgn0004878, exon 3 of 4) 3036 FBgn0004878 FBgn0004878 FBtr0078725 cas protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2292 chr2L 15555787 15555881 + 12 NA intron (FBgn0028370, intron 2 of 3) protein_coding-intron (FBgn0028370, intron 2 of 3) 3111 FBgn0028370 FBgn0028370 FBtr0300848 kek3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3273 chr2L 20690900 20691033 + 12 NA intron (FBgn0014859, intron 2 of 5) protein_coding-intron (FBgn0014859, intron 1 of 4) 8596 FBgn0032877 FBgn0032877 FBtr0081391 CG2617 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1336 chr2L 9364704 9364758 + 12 NA exon (FBgn0263323, exon 2 of 2) protein_coding-exon (FBgn0263323, exon 2 of 2) 434 FBgn0263323 FBgn0263323 FBtr0308747 CG43404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2453 chr2L 16342128 16342182 + 12 NA TTS (FBgn0000307) protein_coding-TTS (FBgn0000307) 169 FBgn0259151 FBgn0259151 FBtr0299599 CG42266 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7218 chr3L 6700963 6701165 + 12 NA intron (FBgn0035711, intron 2 of 3) protein_coding-intron (FBgn0035711, intron 1 of 2) 379 FBgn0035711 FBgn0035711 FBtr0333072 CG8519 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9574 chr3R 5130095 5130261 + 12 NA intron (FBgn0037676, intron 2 of 3) protein_coding-intron (FBgn0037676, intron 2 of 3) -17314 FBgn0037675 FBgn0037675 FBtr0082016 HP1e protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11253 chr3R 17604259 17604393 + 12 NA promoter-TSS (FBgn0038903) protein_coding-promoter-TSS (FBgn0038903) -816 FBgn0038903 FBgn0038903 FBtr0084166 RpI12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6894 chr3L 2098441 2098580 + 12 NA exon (FBgn0086906, exon 7 of 14) protein_coding-exon (FBgn0086906, exon 7 of 14) 10344 FBgn0262107 FBgn0262107 FBtr0304033 CR42860 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4241 chr2R 4104616 4104729 + 12 NA exon (FBgn0053087, exon 15 of 23) protein_coding-exon (FBgn0053087, exon 15 of 23) -11461 FBgn0033275 FBgn0033275 FBtr0088804 CG14756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10904 chr3R 15201082 15201428 + 12 NA promoter-TSS (FBgn0038697) protein_coding-promoter-TSS (FBgn0038697) 490 FBgn0051404 FBgn0051404 FBtr0083774 CG31404 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8623 chr3L 20970835 20970924 + 12 NA promoter-TSS (FBgn0053283) pseudogene-promoter-TSS (FBgn0053283) -986 FBgn0053283 FBgn0053283 FBtr0302444 CR33283 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5209 chr2R 11656787 11656899 + 12 NA exon (FBgn0083919, exon 12 of 15) protein_coding-intron (FBgn0083919, intron 10 of 13) 41940 FBgn0050089 FBgn0050089 FBtr0087285 CG30089 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6897 chr3L 2134443 2134605 + 12 NA exon (FBgn0052311, exon 11 of 20) protein_coding-exon (FBgn0052311, exon 11 of 20) 17176 FBgn0052311 FBgn0052311 FBtr0332119 zormin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7536 chr3L 10103838 10104015 + 12 NA intron (FBgn0040823, intron 6 of 6) protein_coding-intron (FBgn0040823, intron 6 of 6) -9945 FBgn0262008 FBgn0262008 FBtr0303832 CG42826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5222 chr2R 11777856 11778072 + 12 NA exon (FBgn0264089, exon 2 of 20) protein_coding-exon (FBgn0264089, exon 2 of 20) 5968 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2511 chr2L 16711908 16712094 + 12 NA intron (FBgn0062978, intron 1 of 1) protein_coding-intron (FBgn0062978, intron 1 of 1) -3857 FBgn0086907 FBgn0086907 FBtr0080888 Cyt-c-d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_651 chr2L 4481115 4481181 + 12 NA exon (FBgn0053196, exon 45 of 47) protein_coding-exon (FBgn0053196, exon 45 of 47) -4124 FBgn0011603 FBgn0011603 FBtr0301408 ine protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12142 chr3R 24401762 24401897 + 12 NA Intergenic Intergenic 9005 FBgn0000659 FBgn0000659 FBtr0085321 fkh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5166 chr2R 11283467 11283665 + 12 NA Intergenic Intergenic -12785 FBgn0014865 FBgn0014865 FBtr0087386 Mtk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11612 chr3R 22188847 22188922 + 12 NA Intergenic Intergenic 7674 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9527 chr3R 4784963 4785121 + 12 NA intron (FBgn0037645, intron 1 of 1) protein_coding-intron (FBgn0037645, intron 1 of 1) 3641 FBgn0037645 FBgn0037645 FBtr0082014 CG11966 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6288 chr2R 21115442 21115582 + 12 NA exon (FBgn0001325, exon 2 of 2) protein_coding-exon (FBgn0001325, exon 2 of 2) 1378 FBgn0001325 FBgn0001325 FBtr0072449 Kr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9286 chr3R 2874380 2874567 + 12 NA Intergenic Intergenic -3584 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10937 chr3R 15419321 15419667 + 12 NA intron (FBgn0260003, intron 33 of 33) protein_coding-intron (FBgn0260003, intron 34 of 34) 5177 FBgn0038714 FBgn0038714 FBtr0083811 Cpr92A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11668 chr3R 22446702 22446852 + 12 NA TTS (FBgn0039434) protein_coding-TTS (FBgn0039434) 305 FBgn0039435 FBgn0039435 FBtr0085058 TwdlP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9191 chr3R 2402658 2402890 + 12 NA intron (FBgn0053202, intron 1 of 7) protein_coding-intron (FBgn0053202, intron 1 of 7) -3732 FBgn0037455 FBgn0037455 FBtr0089748 CG2336 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10681 chr3R 13608703 13608782 + 12 NA exon (FBgn0262562, exon 3 of 17) protein_coding-exon (FBgn0262562, exon 3 of 17) 11554 FBgn0262562 FBgn0262562 FBtr0305013 CG43102 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2481 chr2L 16540970 16541068 + 12 NA Intergenic Intergenic -1527 FBgn0051816 FBgn0051816 FBtr0080868 CG31816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8099 chr3L 14931432 14931546 + 12 NA intron (FBgn0259099, intron 2 of 10) protein_coding-intron (FBgn0259099, intron 2 of 10) 5942 FBgn0040809 FBgn0040809 FBtr0075674 CG13465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12036 chr3R 24027335 24027452 + 12 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 54791 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12188 chr3R 24577620 24577723 + 12 NA promoter-TSS (FBgn0039596) protein_coding-promoter-TSS (FBgn0039596) -358 FBgn0039596 FBgn0039596 FBtr0085315 CG10000 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5241 chr2R 11932274 11932472 + 12 NA exon (FBgn0034070, exon 12 of 15) protein_coding-exon (FBgn0034070, exon 12 of 15) -2804 FBgn0034071 FBgn0034071 FBtr0087210 CG8405 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13749 chrX 15157430 15157484 + 12 NA Intergenic Intergenic 8475 FBgn0030624 FBgn0030624 FBtr0074022 CG9106 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9355 chr3R 3398741 3398902 + 12 NA exon (FBgn0083963, exon 13 of 13) protein_coding-exon (FBgn0083963, exon 13 of 13) -23977 FBgn0015568 FBgn0015568 FBtr0081544 alpha-Est1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7744 chr3L 12214049 12214182 + 12 NA exon (FBgn0260941, exon 4 of 10) protein_coding-exon (FBgn0260941, exon 4 of 10) -6565 FBgn0260941 FBgn0260941 FBtr0301053 app protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3390 chr2L 21374299 21374438 + 12 NA exon (FBgn0032945, exon 2 of 3) protein_coding-exon (FBgn0032945, exon 2 of 3) 3141 FBgn0032945 FBgn0032945 FBtr0081517 CG8665 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1440 chr2L 10572115 10572252 + 12 NA intron (FBgn0051721, intron 1 of 9) protein_coding-intron (FBgn0051721, intron 1 of 8) 4893 FBgn0032268 FBgn0032268 FBtr0080098 CG6138 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8083 chr3L 14795262 14795353 + 12 NA promoter-TSS (FBgn0029148) protein_coding-promoter-TSS (FBgn0029148) -39 FBgn0029148 FBgn0029148 FBtr0075698 NHP2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7867 chr3L 13082507 13082650 + 12 NA exon (FBgn0036346, exon 1 of 1) protein_coding-exon (FBgn0036346, exon 1 of 1) 491 FBgn0036346 FBgn0036346 FBtr0075891 CG11251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13433 chrX 1324542 1324665 + 12 NA intron (FBgn0259108, intron 3 of 8) protein_coding-intron (FBgn0259108, intron 2 of 7) 21501 FBgn0259108 FBgn0259108 FBtr0112628 futsch protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8717 chr3L 23052502 23052565 + 12 NA Intergenic Intergenic 36038 FBgn0024733 FBgn0024733 FBtr0299870 RpL10 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12281 chr3R 25018383 25018598 + 12 NA intron (FBgn0039647, intron 1 of 7) protein_coding-intron (FBgn0039647, intron 1 of 6) 2225 FBgn0039647 FBgn0039647 FBtr0113304 CG14509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_549 chr2L 3747613 3747667 + 12 NA exon (FBgn0031568, exon 4 of 12) protein_coding-exon (FBgn0031568, exon 4 of 12) -9616 FBgn0263846 FBgn0263846 FBtr0321309 CG43707 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3790 chr2L 22639151 22639488 + 12 NA intron (FBgn0058006, intron 1 of 9) protein_coding-intron (FBgn0058006, intron 1 of 9) 5208 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1074 chr2L 8476509 8476658 + 12 NA promoter-TSS (FBgn0053194) protein_coding-promoter-TSS (FBgn0053194) -766 FBgn0053194 FBgn0053194 FBtr0079676 CheA29a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11084 chr3R 16213214 16213280 + 12 NA exon (FBgn0262869, exon 13 of 20) protein_coding-exon (FBgn0262869, exon 13 of 20) 20321 FBgn0038795 FBgn0038795 FBtr0083894 CG4335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12029 chr3R 24007142 24007207 + 12 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 34572 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13722 chrX 13484025 13484180 + 12 NA exon (FBgn0086674, exon 8 of 8) protein_coding-exon (FBgn0086674, exon 8 of 8) 12434 FBgn0004169 FBgn0004169 FBtr0073853 up protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10014 chr3R 8867819 8868026 + 12 NA promoter-TSS (FBgn0003450) protein_coding-promoter-TSS (FBgn0003450) 132 FBgn0038114 FBgn0038114 FBtr0300071 CG11670 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2058 chr2L 14693613 14693778 + 11 NA Intergenic Intergenic -4370 FBgn0003016 FBgn0003016 FBtr0301496 osp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9724 chr3R 6504807 6504894 + 11 NA intron (FBgn0037819, intron 1 of 2) protein_coding-intron (FBgn0037819, intron 1 of 2) 1649 FBgn0037819 FBgn0037819 FBtr0113215 CG14688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10745 chr3R 14038618 14038789 + 11 NA exon (FBgn0028499, exon 2 of 4) protein_coding-exon (FBgn0028499, exon 2 of 4) -3153 FBgn0038581 FBgn0038581 FBtr0083560 CG14314 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3363 chr2L 21255519 21255624 + 11 NA exon (FBgn0261239, exon 4 of 5) protein_coding-exon (FBgn0261239, exon 4 of 5) -5597 FBgn0021856 FBgn0021856 FBtr0081482 l(2)k14505 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6850 chr3L 1611537 1611622 + 11 NA exon (FBgn0035241, exon 1 of 1) protein_coding-exon (FBgn0035241, exon 1 of 1) 2931 FBgn0035241 FBgn0035241 FBtr0331463 CG12105 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3655 chr2L 22213187 22213375 + 11 NA exon (FBgn0259683, exon 3 of 7) protein_coding-exon (FBgn0259683, exon 3 of 7) 984 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1912 chr2L 14291310 14291407 + 11 NA exon (FBgn0263648, exon 2 of 2) ncRNA-exon (FBgn0263648, exon 2 of 2) 157 FBgn0263648 FBgn0263648 FBtr0310012 CR43639 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1375 chr2L 9743952 9744133 + 11 NA exon (FBgn0028704, exon 2 of 8) protein_coding-exon (FBgn0028704, exon 2 of 8) 2441 FBgn0028704 FBgn0028704 FBtr0079928 Nckx30C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6209 chr2R 20361392 20361486 + 11 NA promoter-TSS (FBgn0035008) protein_coding-promoter-TSS (FBgn0035008) -442 FBgn0035008 FBgn0035008 FBtr0072296 CG3494 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_76 chr2L 758342 758528 + 11 NA TTS (FBgn0031275) protein_coding-TTS (FBgn0031275) 7826 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11039 chr3R 15959349 15959506 + 11 NA Intergenic Intergenic 6216 FBgn0262025 FBgn0262025 FBtr0303856 CR42836 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1931 chr2L 14318421 14318603 + 11 NA intron (FBgn0261563, intron 2 of 13) protein_coding-intron (FBgn0261563, intron 4 of 15) -9917 FBgn0261529 FBgn0261529 FBtr0080623 ms(2)34Fe protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8116 chr3L 15111529 15111583 + 11 NA exon (FBgn0036480, exon 5 of 13) protein_coding-exon (FBgn0036480, exon 5 of 13) 1719 FBgn0036480 FBgn0036480 FBtr0333853 Cep135 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3342 chr2L 21086934 21087032 + 11 NA promoter-TSS (FBgn0053509) protein_coding-promoter-TSS (FBgn0053509) -477 FBgn0053509 FBgn0053509 FBtr0091449 CG33509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11723 chr3R 22609926 22609993 + 11 NA promoter-TSS (FBgn0261861) protein_coding-promoter-TSS (FBgn0261861) -29 FBgn0261860 FBgn0261860 FBtr0310471 CG42789 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1972 chr2L 14420455 14420540 + 11 NA Intergenic Intergenic -3179 FBgn0032546 FBgn0032546 FBtr0080634 pburs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13444 chrX 1394286 1394497 + 11 NA intron (FBgn0053513, intron 1 of 9) protein_coding-intron (FBgn0053513, intron 2 of 10) 7451 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_877 chr2L 6356033 6356185 + 11 NA exon (FBgn0031803, exon 3 of 3) protein_coding-exon (FBgn0031803, exon 3 of 3) 1153 FBgn0031803 FBgn0031803 FBtr0079252 ppk14 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1054 chr2L 8142749 8142820 + 11 NA TTS (FBgn0261830) protein_coding-TTS (FBgn0261830) -1195 FBgn0263561 FBgn0263561 FBtr0309701 mir-4984 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3286 chr2L 20720336 20720499 + 11 NA Intergenic Intergenic -6001 FBgn0014859 FBgn0014859 FBtr0081398 Hr38 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4550 chr2R 6255321 6255375 + 11 NA intron (FBgn0261698, intron 2 of 27) protein_coding-intron (FBgn0261698, intron 2 of 28) 5538 FBgn0041242 FBgn0041242 FBtr0303149 Gr47a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4468 chr2R 5665836 5666050 + 11 NA intron (FBgn0027589, intron 3 of 8) protein_coding-intron (FBgn0027589, intron 3 of 8) -14905 FBgn0033443 FBgn0033443 FBtr0088474 CG1698 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8695 chr3L 22356973 22357163 + 11 NA intron (FBgn0004449, intron 1 of 11) protein_coding-intron (FBgn0004449, intron 1 of 8) 34190 FBgn0052450 FBgn0052450 FBtr0078501 CG32450 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6127 chr2R 19618528 19618620 + 11 NA exon (FBgn0034897, exon 5 of 10) protein_coding-exon (FBgn0034897, exon 5 of 10) 3027 FBgn0263543 FBgn0263543 FBtr0309652 mir-4979 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1021 chr2L 7898502 7898640 + 11 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) -7977 FBgn0053121 FBgn0053121 FBtr0079557 Spn28Db protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3098 chr2L 19803426 19803539 + 11 NA intron (FBgn0263873, intron 1 of 15) protein_coding-intron (FBgn0263873, intron 1 of 15) -7252 FBgn0003931 FBgn0003931 FBtr0081292 snRNA:U4:38AB snRNA Nup98-S2-pascual-garcia2017_R1_peak_7788 chr3L 12478049 12478282 + 11 NA promoter-TSS (FBgn0053725) protein_coding-promoter-TSS (FBgn0053725) -111 FBgn0036287 FBgn0036287 FBtr0113167 CG10663 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11134 chr3R 16555308 16555393 + 11 NA Intergenic Intergenic -2003 FBgn0051205 FBgn0051205 FBtr0300451 CG31205 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10354 chr3R 11581344 11581501 + 11 NA Intergenic Intergenic -7415 FBgn0038356 FBgn0038356 FBtr0083169 CG12784 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5401 chr2R 13511734 13511788 + 11 NA intron (FBgn0034253, intron 2 of 8) protein_coding-intron (FBgn0034253, intron 2 of 8) 7500 FBgn0082922 FBgn0082922 FBtr0113512 snoRNA:Or-aca4 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_3920 chr2R 426323 426534 + 11 NA Intergenic Intergenic -7753 FBgn0046692 FBgn0046692 FBtr0308810 Stlk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_267 chr2L 1463437 1463491 + 11 NA Intergenic Intergenic 20738 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_943 chr2L 6933528 6933653 + 11 NA exon (FBgn0031869, exon 13 of 16) protein_coding-exon (FBgn0031869, exon 13 of 16) 1469 FBgn0262877 FBgn0262877 FBtr0306284 CG43232 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12338 chr3R 25300656 25300745 + 11 NA intron (FBgn0004369, intron 11 of 18) protein_coding-intron (FBgn0004369, intron 5 of 12) -4720 FBgn0004369 FBgn0004369 FBtr0303454 Ptp99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7280 chr3L 7070566 7070620 + 11 NA promoter-TSS (FBgn0035733) protein_coding-promoter-TSS (FBgn0035733) -31 FBgn0035733 FBgn0035733 FBtr0076931 CG8641 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7384 chr3L 8267567 8267749 + 11 NA exon (FBgn0263219, exon 20 of 32) protein_coding-exon (FBgn0263219, exon 20 of 32) 11911 FBgn0027569 FBgn0027569 FBtr0332136 cert protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4467 chr2R 5660892 5660946 + 11 NA intron (FBgn0027589, intron 5 of 8) protein_coding-intron (FBgn0027589, intron 5 of 8) -15346 FBgn0033442 FBgn0033442 FBtr0088496 CG1690 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7909 chr3L 13411888 13411970 + 11 NA exon (FBgn0052121, exon 4 of 5) protein_coding-exon (FBgn0052121, exon 4 of 5) 3507 FBgn0052121 FBgn0052121 FBtr0113424 CG32121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4146 chr2R 3304670 3304766 + 11 NA Intergenic Intergenic -1819 FBgn0003460 FBgn0003460 FBtr0088970 so protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12622 chr3R 26892127 26892278 + 11 NA intron (FBgn0024288, intron 1 of 2) protein_coding-intron (FBgn0024288, intron 1 of 2) 1123 FBgn0024288 FBgn0024288 FBtr0085735 Sox100B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9550 chr3R 5098545 5098651 + 11 NA Intergenic Intergenic 5844 FBgn0261241 FBgn0261241 FBtr0081979 Vps16A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11293 chr3R 18092875 18093065 + 11 NA intron (FBgn0051163, intron 4 of 18) protein_coding-intron (FBgn0051163, intron 4 of 18) -25678 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1902 chr2L 14261394 14261469 + 11 NA Intergenic Intergenic -1596 FBgn0261563 FBgn0261563 FBtr0302735 wb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_993 chr2L 7375573 7375815 + 11 NA exon (FBgn0031903, exon 5 of 6) protein_coding-exon (FBgn0031903, exon 5 of 6) -2042 FBgn0002938 FBgn0002938 FBtr0079437 ninaC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6796 chr3L 1126630 1126790 + 11 NA Intergenic Intergenic -25621 FBgn0004870 FBgn0004870 FBtr0072643 bab1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2817 chr2L 18008443 18008613 + 11 NA promoter-TSS (FBgn0051740) protein_coding-promoter-TSS (FBgn0051740) -260 FBgn0051740 FBgn0051740 FBtr0081028 CG31740 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2136 chr2L 14966212 14966292 + 11 NA intron (FBgn0259213, intron 1 of 19) protein_coding-intron (FBgn0259213, intron 1 of 19) 6048 FBgn0259213 FBgn0259213 FBtr0299711 CG42313 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12728 chr3R 27359918 27359993 + 11 NA Intergenic Intergenic -8930 FBgn0039852 FBgn0039852 FBtr0300876 nyo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6832 chr3L 1430743 1430842 + 11 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 3 of 7) 7080 FBgn0043865 FBgn0043865 FBtr0301788 SA-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2737 chr2L 17745279 17745436 + 11 NA intron (FBgn0015609, intron 3 of 23) protein_coding-intron (FBgn0015609, intron 1 of 21) 6989 FBgn0015609 FBgn0015609 FBtr0100316 CadN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10371 chr3R 11695465 11695693 + 11 NA exon (FBgn0051183, exon 1 of 8) protein_coding-exon (FBgn0051183, exon 1 of 8) 195 FBgn0051183 FBgn0051183 FBtr0083187 CG31183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_49 chr2L 699298 699424 + 11 NA intron (FBgn0000497, intron 2 of 11) protein_coding-intron (FBgn0000497, intron 2 of 11) 15607 FBgn0000497 FBgn0000497 FBtr0078045 ds protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6167 chr2R 20128996 20129098 + 11 NA Intergenic Intergenic -1739 FBgn0050418 FBgn0050418 FBtr0072263 nord protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12784 chr3R 27663487 27663660 + 11 NA TTS (FBgn0039883) protein_coding-TTS (FBgn0039883) 12007 FBgn0039883 FBgn0039883 FBtr0304596 RhoGAP100F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5016 chr2R 9927945 9928110 + 11 NA exon (FBgn0002643, exon 4 of 7) protein_coding-exon (FBgn0002643, exon 4 of 7) 8843 FBgn0002643 FBgn0002643 FBtr0087598 mam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11800 chr3R 23138941 23139030 + 11 NA exon (FBgn0039510, exon 15 of 32) protein_coding-exon (FBgn0039510, exon 15 of 32) 9062 FBgn0039510 FBgn0039510 FBtr0273193 CG3339 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5819 chr2R 17156964 17157189 + 11 NA intron (FBgn0085426, intron 2 of 8) protein_coding-intron (FBgn0085426, intron 2 of 8) -1992 FBgn0050393 FBgn0050393 FBtr0071620 CG30393 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3762 chr2L 22590815 22590952 + 11 NA intron (FBgn0058006, intron 4 of 9) protein_coding-intron (FBgn0058006, intron 4 of 9) 53644 FBgn0264548 FBgn0264548 FBtr0333244 CR43927 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4096 chr2R 2831839 2831986 + 11 NA promoter-TSS (FBgn0066293) protein_coding-promoter-TSS (FBgn0066293) -412 FBgn0066293 FBgn0066293 FBtr0086192 CheB42b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8970 chr3R 577334 577512 + 11 NA exon (FBgn0051530, exon 5 of 5) protein_coding-exon (FBgn0051530, exon 5 of 5) -2645 FBgn0026620 FBgn0026620 FBtr0089951 tacc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1463 chr2L 10755433 10755546 + 11 NA intron (FBgn0032297, intron 1 of 3) protein_coding-intron (FBgn0032297, intron 1 of 3) 827 FBgn0032297 FBgn0032297 FBtr0080117 CG17124 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6952 chr3L 2829909 2830025 + 11 NA intron (FBgn0263392, intron 5 of 10) protein_coding-intron (FBgn0263392, intron 4 of 9) 47712 FBgn0035375 FBgn0035375 FBtr0333442 pgant6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2194 chr2L 15208150 15208248 + 11 NA Intergenic Intergenic 5940 FBgn0263089 FBgn0263089 FBtr0307107 CR43357 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4048 chr2R 2089053 2089130 + 11 NA exon (FBgn0033069, exon 2 of 2) protein_coding-exon (FBgn0033069, exon 2 of 2) 791 FBgn0033069 FBgn0033069 FBtr0085990 CG8335 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7724 chr3L 12018445 12018639 + 11 NA intron (FBgn0041096, intron 4 of 6) protein_coding-intron (FBgn0041096, intron 4 of 7) -2359 FBgn0264726 FBgn0264726 FBtr0334107 CR43994 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_437 chr2L 2813026 2813284 + 11 NA exon (FBgn0031462, exon 1 of 2) protein_coding-exon (FBgn0031462, exon 1 of 2) 718 FBgn0031462 FBgn0031462 FBtr0077722 CG2964 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10188 chr3R 10216785 10216839 + 11 NA TTS (FBgn0086901) protein_coding-TTS (FBgn0086901) 5353 FBgn0262327 FBgn0262327 FBtr0304502 mir-2281 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6267 chr2R 20941043 20941097 + 11 NA Intergenic Intergenic -1220 FBgn0001147 FBgn0001147 FBtr0072461 gsb-n protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10224 chr3R 10598968 10599055 + 11 NA intron (FBgn0263929, intron 2 of 6) protein_coding-intron (FBgn0263929, intron 1 of 5) -18829 FBgn0038258 FBgn0038258 FBtr0331700 CG7362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7328 chr3L 7596371 7596524 + 11 NA exon (FBgn0035802, exon 2 of 17) protein_coding-exon (FBgn0035802, exon 2 of 17) 6117 FBgn0035802 FBgn0035802 FBtr0089851 CG33275 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12497 chr3R 25968758 25968815 + 11 NA intron (FBgn0039747, intron 1 of 4) protein_coding-intron (FBgn0039747, intron 1 of 4) 6542 FBgn0039747 FBgn0039747 FBtr0085581 AdoR protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2916 chr2L 18676343 18676443 + 11 NA promoter-TSS (FBgn0086909) protein_coding-promoter-TSS (FBgn0086909) 605 FBgn0086681 FBgn0086681 FBtr0305341 Mst36Fa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11252 chr3R 17600317 17600516 + 11 NA exon (FBgn0027575, exon 3 of 13) protein_coding-exon (FBgn0027575, exon 3 of 13) 1146 FBgn0027575 FBgn0027575 FBtr0084168 GABA-B-R2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1429 chr2L 10282506 10282595 + 11 NA exon (FBgn0032208, exon 7 of 8) protein_coding-exon (FBgn0032208, exon 7 of 8) -1678 FBgn0054043 FBgn0054043 FBtr0300408 CG34043 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5029 chr2R 10131754 10131808 + 11 NA TTS (FBgn0033916) protein_coding-TTS (FBgn0033916) 589 FBgn0033917 FBgn0033917 FBtr0087536 CG8503 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12170 chr3R 24536350 24536450 + 11 NA exon (FBgn0027655, exon 10 of 29) protein_coding-exon (FBgn0027655, exon 10 of 29) 14436 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11570 chr3R 22022385 22022439 + 11 NA Intergenic Intergenic -5485 FBgn0083965 FBgn0083965 FBtr0110870 CG34129 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3676 chr2L 22278874 22279023 + 11 NA Intergenic Intergenic 29070 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7380 chr3L 8246581 8246742 + 11 NA intron (FBgn0263219, intron 2 of 31) protein_coding-intron (FBgn0263219, intron 2 of 31) 12430 FBgn0263219 FBgn0263219 FBtr0333590 Dscam4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9226 chr3R 2592014 2592149 + 11 NA promoter-TSS (FBgn0261638) ncRNA-promoter-TSS (FBgn0261638) -691 FBgn0261638 FBgn0261638 FBtr0309069 CR42721 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_2600 chr2L 17092799 17092853 + 11 NA Intergenic Intergenic 5185 FBgn0032626 FBgn0032626 FBtr0080953 CG12620 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9752 chr3R 6758857 6758940 + 11 NA Intergenic Intergenic -17108 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11649 chr3R 22334085 22334155 + 11 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 26819 FBgn0039431 FBgn0039431 FBtr0302210 CG6490 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2362 chr2L 15930093 15930226 + 11 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) 6764 FBgn0028514 FBgn0028514 FBtr0300612 CG4793 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5591 chr2R 15233946 15234000 + 11 NA TTS (FBgn0034435) protein_coding-TTS (FBgn0034435) 4659 FBgn0034435 FBgn0034435 FBtr0304055 CG9975 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11613 chr3R 22189202 22189282 + 11 NA Intergenic Intergenic 8032 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7030 chr3L 4201645 4201756 + 11 NA exon (FBgn0035508, exon 2 of 2) protein_coding-exon (FBgn0035508, exon 2 of 2) 2638 FBgn0035508 FBgn0035508 FBtr0073255 CG15005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9375 chr3R 3571017 3571080 + 11 NA Intergenic Intergenic 4750 FBgn0037513 FBgn0037513 FBtr0081780 pyd3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2483 chr2L 16548807 16548964 + 11 NA TTS (FBgn0032588) protein_coding-TTS (FBgn0032588) 1074 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_87 chr2L 786536 786596 + 11 NA TTS (FBgn0031279) protein_coding-TTS (FBgn0031279) 2230 FBgn0031279 FBgn0031279 FBtr0078007 CG3544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9417 chr3R 3895311 3895494 + 11 NA intron (FBgn0037546, intron 1 of 3) protein_coding-intron (FBgn0037546, intron 1 of 3) -5951 FBgn0086052 FBgn0086052 FBtr0114328 snoRNA:Me18S-G423 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_116 chr2L 927189 927349 + 11 NA intron (FBgn0028481, intron 1 of 9) protein_coding-intron (FBgn0028481, intron 1 of 10) 4476 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3845 chr2L 22903072 22903225 + 11 NA intron (FBgn0250907, intron 5 of 8) protein_coding-intron (FBgn0250907, intron 5 of 8) 15412 FBgn0250907 FBgn0250907 FBtr0331165 Cht3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10220 chr3R 10498087 10498187 + 11 NA intron (FBgn0051314, intron 2 of 6) protein_coding-intron (FBgn0051314, intron 2 of 7) 8972 FBgn0038252 FBgn0038252 FBtr0082969 CG3509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8563 chr3L 19529545 19529599 + 11 NA exon (FBgn0036881, exon 2 of 5) protein_coding-exon (FBgn0036881, exon 2 of 5) 3729 FBgn0036881 FBgn0036881 FBtr0332756 Cpr76Bd protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10152 chr3R 9842335 9842443 + 11 NA intron (FBgn0264493, intron 2 of 8) protein_coding-intron (FBgn0264493, intron 2 of 8) 9292 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11989 chr3R 23856349 23856472 + 11 NA exon (FBgn0085391, exon 2 of 10) protein_coding-exon (FBgn0085391, exon 2 of 10) 4076 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4718 chr2R 7662473 7662669 + 11 NA intron (FBgn0033652, intron 1 of 3) protein_coding-intron (FBgn0033652, intron 1 of 3) -3512 FBgn0260007 FBgn0260007 FBtr0300507 CG42493 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11858 chr3R 23281580 23281804 + 11 NA Intergenic Intergenic -8219 FBgn0039518 FBgn0039518 FBtr0085182 CG13978 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6172 chr2R 20169443 20169497 + 11 NA intron (FBgn0005636, intron 1 of 5) protein_coding-intron (FBgn0005636, intron 1 of 5) 6212 FBgn0005636 FBgn0005636 FBtr0330611 nvy protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7377 chr3L 8218751 8218813 + 11 NA Intergenic Intergenic 3541 FBgn0035859 FBgn0035859 FBtr0076700 CG13678 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3010 chr2L 19308019 19308149 + 11 NA Intergenic Intergenic 7778 FBgn0032769 FBgn0032769 FBtr0081196 CG10750 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9185 chr3R 2347222 2347372 + 11 NA Intergenic Intergenic -5954 FBgn0037449 FBgn0037449 FBtr0081675 CG15185 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6196 chr2R 20266949 20267011 + 11 NA TTS (FBgn0035000) protein_coding-TTS (FBgn0035000) 1626 FBgn0035000 FBgn0035000 FBtr0072289 CG13578 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5974 chr2R 18342503 18342643 + 11 NA Intergenic Intergenic -11421 FBgn0034731 FBgn0034731 FBtr0300683 CG10384 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3118 chr2L 19885785 19885949 + 11 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 6683 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11425 chr3R 20464778 20464934 + 11 NA intron (FBgn0039214, intron 17 of 20) protein_coding-intron (FBgn0039214, intron 17 of 20) -3969 FBgn0262858 FBgn0262858 FBtr0306166 CG43222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7009 chr3L 3833276 3833330 + 11 NA exon (FBgn0004875, exon 6 of 12) protein_coding-exon (FBgn0004875, exon 6 of 12) 7854 FBgn0064227 FBgn0064227 FBtr0073154 Rdh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12556 chr3R 26669744 26669865 + 11 NA Intergenic Intergenic -8233 FBgn0003720 FBgn0003720 FBtr0085709 tll protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11222 chr3R 17369447 17369533 + 11 NA Intergenic Intergenic -10782 FBgn0263130 FBgn0263130 FBtr0307362 CR43372 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9219 chr3R 2578913 2579140 + 11 NA exon (FBgn0004053, exon 2 of 2) protein_coding-exon (FBgn0004053, exon 2 of 2) 890 FBgn0004053 FBgn0004053 FBtr0081670 zen protein_coding Nup98-S2-pascual-garcia2017_R1_peak_85 chr2L 779239 779491 + 11 NA exon (FBgn0031277, exon 1 of 1) protein_coding-exon (FBgn0031277, exon 1 of 1) 192 FBgn0031277 FBgn0031277 FBtr0078005 CG13947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5803 chr2R 17066813 17067061 + 11 NA promoter-TSS (FBgn0034601) protein_coding-promoter-TSS (FBgn0034601) 297 FBgn0003162 FBgn0003162 FBtr0308706 Pu protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5522 chr2R 14577521 14577592 + 11 NA intron (FBgn0262103, intron 1 of 7) protein_coding-intron (FBgn0262103, intron 1 of 7) 1919 FBgn0262103 FBgn0262103 FBtr0304024 Sik3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3473 chr2L 21812588 21812683 + 11 NA Intergenic Intergenic -15958 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7448 chr3L 8799044 8799216 + 11 NA TTS (FBgn0085456) protein_coding-TTS (FBgn0085456) 1183 FBgn0035931 FBgn0035931 FBtr0076587 CG13312 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6199 chr2R 20298002 20298278 + 11 NA promoter-TSS (FBgn0010414) protein_coding-promoter-TSS (FBgn0010414) -70 FBgn0010414 FBgn0010414 FBtr0072362 SerT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7814 chr3L 12657125 12657292 + 11 NA Intergenic Intergenic -11018 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4293 chr2R 4525483 4525537 + 11 NA Intergenic Intergenic -6043 FBgn0033317 FBgn0033317 FBtr0088727 CG8635 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9397 chr3R 3717762 3717816 + 11 NA intron (FBgn0260005, intron 1 of 3) protein_coding-intron (FBgn0260005, intron 1 of 3) 736 FBgn0260005 FBgn0260005 FBtr0081755 wtrw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6074 chr2R 19237436 19237652 + 11 NA Intergenic Intergenic -1563 FBgn0085239 FBgn0085239 FBtr0112403 CG34210 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1195 chr2L 8790005 8790085 + 11 NA Intergenic Intergenic -7551 FBgn0261627 FBgn0261627 FBtr0302991 CG42710 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6620 chr2RHet 2238500 2238554 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_4224 chr2R 3922869 3922972 + 11 NA intron (FBgn0025360, intron 3 of 3) protein_coding-intron (FBgn0025360, intron 3 of 3) 4131 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5254 chr2R 12105973 12106085 + 11 NA TTS (FBgn0050238) tRNA-TTS (FBgn0050238) 921 FBgn0050238 FBgn0050238 FBtr0087197 tRNA:CR30238 tRNA Nup98-S2-pascual-garcia2017_R1_peak_5764 chr2R 16712803 16712957 + 11 NA exon (FBgn0011674, exon 2 of 4) protein_coding-exon (FBgn0011674, exon 2 of 4) 7039 FBgn0016984 FBgn0016984 FBtr0071563 sktl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4190 chr2R 3724470 3724646 + 11 NA TTS (FBgn0040780) protein_coding-TTS (FBgn0040780) 4687 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11776 chr3R 22995986 22996191 + 11 NA Intergenic Intergenic 4648 FBgn0003482 FBgn0003482 FBtr0085116 spn-D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12316 chr3R 25216275 25216376 + 11 NA intron (FBgn0004369, intron 2 of 18) protein_coding-intron (FBgn0004369, intron 2 of 18) -70989 FBgn0015622 FBgn0015622 FBtr0110909 Cnx99A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_722 chr2L 5129604 5129817 + 11 NA exon (FBgn0261836, exon 7 of 18) protein_coding-exon (FBgn0261836, exon 7 of 18) -22039 FBgn0261836 FBgn0261836 FBtr0303384 Msp-300 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3476 chr2L 21817013 21817200 + 11 NA Intergenic Intergenic -11487 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9971 chr3R 8600598 8600652 + 11 NA intron (FBgn0038084, intron 1 of 5) protein_coding-intron (FBgn0038084, intron 1 of 5) 3249 FBgn0038084 FBgn0038084 FBtr0082658 beat-Vc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3693 chr2L 22339769 22339928 + 11 NA promoter-TSS (FBgn0263091) pseudogene-promoter-TSS (FBgn0263091) -774 FBgn0263091 FBgn0263091 FBtr0307110 CR43359 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_4085 chr2R 2782795 2782906 + 11 NA intron (FBgn0050158, intron 2 of 7) protein_coding-intron (FBgn0050158, intron 2 of 7) 3582 FBgn0050158 FBgn0050158 FBtr0086165 CG30158 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4634 chr2R 7147030 7147170 + 11 NA TTS (FBgn0033599) protein_coding-TTS (FBgn0033599) 244 FBgn0033600 FBgn0033600 FBtr0088189 Cpr47Ec protein_coding Nup98-S2-pascual-garcia2017_R1_peak_288 chr2L 1512995 1513157 + 11 NA Intergenic Intergenic 4402 FBgn0031345 FBgn0031345 FBtr0077919 CG18132 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_236 chr2L 1392629 1392898 + 11 NA exon (FBgn0002543, exon 6 of 14) protein_coding-exon (FBgn0002543, exon 6 of 14) 24674 FBgn0031337 FBgn0031337 FBtr0077926 CG14346 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2938 chr2L 18825948 18826002 + 11 NA promoter-TSS (FBgn0027070) protein_coding-promoter-TSS (FBgn0027070) -795 FBgn0027070 FBgn0027070 FBtr0081108 CG17322 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7250 chr3L 6938723 6938842 + 11 NA intron (FBgn0035719, intron 2 of 6) protein_coding-intron (FBgn0035719, intron 1 of 5) 2826 FBgn0035719 FBgn0035719 FBtr0113150 tow protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6955 chr3L 2848165 2848296 + 11 NA intron (FBgn0263392, intron 5 of 10) protein_coding-intron (FBgn0263392, intron 4 of 9) 30928 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1044 chr2L 8055710 8055831 + 11 NA exon (FBgn0011230, exon 12 of 13) protein_coding-exon (FBgn0011230, exon 12 of 13) 12299 FBgn0031981 FBgn0031981 FBtr0079541 CG7466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4377 chr2R 4948808 4948862 + 11 NA exon (FBgn0033369, exon 2 of 2) protein_coding-exon (FBgn0033369, exon 2 of 2) 594 FBgn0033369 FBgn0033369 FBtr0088661 CG8197 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10943 chr3R 15430993 15431198 + 11 NA exon (FBgn0038716, exon 5 of 6) protein_coding-exon (FBgn0038716, exon 5 of 6) -1881 FBgn0038717 FBgn0038717 FBtr0273217 CG17751 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5986 chr2R 18516986 18517166 + 11 NA intron (FBgn0053143, intron 5 of 8) protein_coding-intron (FBgn0053143, intron 6 of 7) 2017 FBgn0053143 FBgn0053143 FBtr0071859 CG33143 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2087 chr2L 14795599 14795653 + 11 NA exon (FBgn0028866, exon 4 of 4) protein_coding-exon (FBgn0028866, exon 4 of 4) 911 FBgn0028866 FBgn0028866 FBtr0080687 CG18420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7721 chr3L 12003645 12003916 + 11 NA exon (FBgn0041096, exon 7 of 8) protein_coding-exon (FBgn0041096, exon 7 of 8) 7525 FBgn0036240 FBgn0036240 FBtr0332709 CG6928 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4614 chr2R 6873663 6873788 + 11 NA intron (FBgn0040765, intron 4 of 4) protein_coding-intron (FBgn0040765, intron 4 of 4) -44519 FBgn0033574 FBgn0033574 FBtr0088211 Spn47C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6215 chr2R 20407506 20407634 + 11 NA TTS (FBgn0259186) pseudogene-TTS (FBgn0259186) 624 FBgn0259187 FBgn0259187 FBtr0302288 Ir60d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6846 chr3L 1580253 1580369 + 11 NA intron (FBgn0035237, intron 1 of 4) protein_coding-intron (FBgn0035237, intron 1 of 4) 3612 FBgn0035237 FBgn0035237 FBtr0303993 CG13917 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3326 chr2L 21005745 21005893 + 11 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -36852 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10992 chr3R 15697597 15697752 + 11 NA exon (FBgn0038740, exon 4 of 9) protein_coding-exon (FBgn0038740, exon 4 of 9) 3267 FBgn0038740 FBgn0038740 FBtr0113250 CG4562 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_100 chr2L 891730 891816 + 11 NA Intergenic Intergenic -6632 FBgn0031292 FBgn0031292 FBtr0332181 CG15824 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10262 chr3R 10944839 10944893 + 11 NA intron (FBgn0261859, intron 1 of 9) protein_coding-intron (FBgn0261859, intron 1 of 9) 11648 FBgn0262315 FBgn0262315 FBtr0304477 mir-2493 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_504 chr2L 3428714 3428768 + 11 NA Intergenic Intergenic -2099 FBgn0031530 FBgn0031530 FBtr0077592 pgant2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1792 chr2L 13348551 13348741 + 11 NA exon (FBgn0032505, exon 1 of 1) protein_coding-exon (FBgn0032505, exon 1 of 1) 855 FBgn0032505 FBgn0032505 FBtr0080464 CG16826 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11881 chr3R 23363975 23364096 + 11 NA Intergenic Intergenic -4184 FBgn0046887 FBgn0046887 FBtr0085186 Gr98b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2124 chr2L 14927038 14927130 + 11 NA exon (FBgn0028887, exon 1 of 3) protein_coding-exon (FBgn0028887, exon 1 of 3) 2349 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3344 chr2L 21089781 21089978 + 11 NA exon (FBgn0032913, exon 1 of 1) protein_coding-exon (FBgn0032913, exon 1 of 1) 504 FBgn0032913 FBgn0032913 FBtr0332033 CG9259 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9349 chr3R 3296211 3296378 + 11 NA Intergenic Intergenic 1560 FBgn0012000 FBgn0012000 FBtr0081561 tRNA:V3b:84Dc tRNA Nup98-S2-pascual-garcia2017_R1_peak_11546 chr3R 21907688 21907843 + 11 NA exon (FBgn0039411, exon 6 of 11) protein_coding-exon (FBgn0039411, exon 6 of 11) 16668 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7767 chr3L 12332874 12333062 + 11 NA exon (FBgn0036278, exon 6 of 6) protein_coding-exon (FBgn0036278, exon 6 of 6) 3192 FBgn0036277 FBgn0036277 FBtr0075954 CG10418 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9050 chr3R 1252457 1252567 + 11 NA exon (FBgn0037325, exon 1 of 1) protein_coding-exon (FBgn0037325, exon 1 of 1) 467 FBgn0037325 FBgn0037325 FBtr0078793 CG12147 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12130 chr3R 24358973 24359176 + 11 NA intron (FBgn0003137, intron 1 of 16) protein_coding-intron (FBgn0003137, intron 1 of 11) 6979 FBgn0003137 FBgn0003137 FBtr0301839 Ppn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7416 chr3L 8565211 8565351 + 11 NA TTS (FBgn0262387) pre_miRNA-TTS (FBgn0262387) 359 FBgn0262387 FBgn0262387 FBtr0304251 mir-190 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_6429 chr2RHet 936889 937040 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_7795 chr3L 12569067 12569143 + 11 NA Intergenic Intergenic -3463 FBgn0036302 FBgn0036302 FBtr0332042 sowah protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7141 chr3L 6036062 6036116 + 11 NA Intergenic Intergenic 3834 FBgn0250815 FBgn0250815 FBtr0077040 Jon65Aiv protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3500 chr2L 21869209 21869364 + 11 NA Intergenic Intergenic -24941 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9346 chr3R 3279703 3279887 + 11 NA Intergenic Intergenic 2013 FBgn0011998 FBgn0011998 FBtr0081536 tRNA:V3b:84Da tRNA Nup98-S2-pascual-garcia2017_R1_peak_1980 chr2L 14432368 14432553 + 11 NA Intergenic Intergenic -7329 FBgn0028871 FBgn0028871 FBtr0080633 Cpr35B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10537 chr3R 12637597 12637718 + 11 NA intron (FBgn0000014, intron 4 of 5) protein_coding-intron (FBgn0000014, intron 5 of 6) 18110 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5312 chr2R 12520781 12520894 + 11 NA exon (FBgn0040505, exon 3 of 9) protein_coding-exon (FBgn0040505, exon 3 of 9) 6679 FBgn0040505 FBgn0040505 FBtr0087118 Alk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8513 chr3L 18480873 18481093 + 11 NA exon (FBgn0036789, exon 2 of 4) protein_coding-exon (FBgn0036789, exon 2 of 4) 14674 FBgn0036789 FBgn0036789 FBtr0330088 AlCR2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_79 chr2L 759902 760077 + 11 NA exon (FBgn0031275, exon 10 of 10) protein_coding-exon (FBgn0031275, exon 10 of 10) 9380 FBgn0031275 FBgn0031275 FBtr0078002 GABA-B-R3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8635 chr3L 21288391 21288492 + 11 NA promoter-TSS (FBgn0037068) protein_coding-promoter-TSS (FBgn0037068) 849 FBgn0037068 FBgn0037068 FBtr0078337 Cpr78Cb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4999 chr2R 9733076 9733202 + 11 NA promoter-TSS (FBgn0050484) protein_coding-promoter-TSS (FBgn0050484) 618 FBgn0033876 FBgn0033876 FBtr0087645 synaptogyrin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5445 chr2R 13904377 13904431 + 11 NA Intergenic Intergenic -1767 FBgn0034288 FBgn0034288 FBtr0086804 CG5084 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6610 chr2RHet 2159853 2159907 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_8385 chr3L 17372653 17372743 + 11 NA promoter-TSS (FBgn0036715) protein_coding-promoter-TSS (FBgn0036715) -68 FBgn0036715 FBgn0036715 FBtr0309231 Cad74A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13481 chrX 1873579 1873755 + 11 NA intron (FBgn0264562, intron 5 of 11) protein_coding-intron (FBgn0264562, intron 5 of 11) 29730 FBgn0023545 FBgn0023545 FBtr0070347 CG4406 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1056 chr2L 8190741 8190844 + 11 NA promoter-TSS (FBgn0083970) protein_coding-promoter-TSS (FBgn0083970) -11 FBgn0083970 FBgn0083970 FBtr0110894 CG34134 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4664 chr2R 7349305 7349469 + 11 NA exon (FBgn0000581, exon 11 of 11) protein_coding-exon (FBgn0000581, exon 11 of 11) 9839 FBgn0000581 FBgn0000581 FBtr0088140 E(Pc) protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4195 chr2R 3749639 3749693 + 11 NA intron (FBgn0085390, intron 2 of 19) protein_coding-intron (FBgn0085390, intron 2 of 20) 23821 FBgn0085390 FBgn0085390 FBtr0308590 Dgk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2883 chr2L 18312907 18312977 + 11 NA Intergenic Intergenic -3535 FBgn0263086 FBgn0263086 FBtr0307101 CG43354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12254 chr3R 24897003 24897179 + 11 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 7541 FBgn0039633 FBgn0039633 FBtr0330300 CG11873 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2352 chr2L 15881729 15881877 + 11 NA Intergenic Intergenic -1738 FBgn0028935 FBgn0028935 FBtr0306681 CG7653 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2558 chr2L 16964106 16964252 + 11 NA Intergenic Intergenic -8912 FBgn0053179 FBgn0053179 FBtr0329973 beat-IIIb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2111 chr2L 14901193 14901336 + 11 NA Intergenic Intergenic -17549 FBgn0013301 FBgn0013301 FBtr0080681 Mst35Bb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_492 chr2L 3343235 3343323 + 11 NA intron (FBgn0020445, intron 3 of 9) protein_coding-intron (FBgn0020445, intron 2 of 8) 10465 FBgn0031523 FBgn0031523 FBtr0304701 CG15408 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11140 chr3R 16600059 16600154 + 11 NA intron (FBgn0038826, intron 2 of 11) protein_coding-intron (FBgn0038826, intron 2 of 11) -1783 FBgn0046689 FBgn0046689 FBtr0083996 Takl1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10087 chr3R 9412405 9412573 + 11 NA Intergenic Intergenic -1230 FBgn0038158 FBgn0038158 FBtr0082788 CG14370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13431 chrX 1304338 1304489 + 11 NA intron (FBgn0259108, intron 1 of 8) protein_coding-intron (FBgn0259108, intron 1 of 8) 1311 FBgn0259108 FBgn0259108 FBtr0112628 futsch protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4933 chr2R 9281457 9281532 + 11 NA promoter-TSS (FBgn0263774) protein_coding-promoter-TSS (FBgn0263774) 284 FBgn0041579 FBgn0041579 FBtr0305795 AttC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9874 chr3R 7832213 7832305 + 11 NA Intergenic Intergenic -1065 FBgn0037976 FBgn0037976 FBtr0082488 Tk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5823 chr2R 17226959 17227086 + 11 NA exon (FBgn0020306, exon 13 of 15) protein_coding-exon (FBgn0020306, exon 13 of 15) -2468 FBgn0034622 FBgn0034622 FBtr0300455 CG15666 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_201 chr2L 1293437 1293523 + 11 NA exon (FBgn0041097, exon 12 of 12) protein_coding-exon (FBgn0041097, exon 12 of 12) -35681 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10941 chr3R 15427953 15428224 + 11 NA exon (FBgn0038715, exon 5 of 6) protein_coding-exon (FBgn0038715, exon 5 of 6) -1009 FBgn0038716 FBgn0038716 FBtr0304745 CG7342 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7699 chr3L 11860038 11860137 + 11 NA Intergenic Intergenic -3540 FBgn0085449 FBgn0085449 FBtr0330129 CG34420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11091 chr3R 16246407 16246481 + 11 NA intron (FBgn0262869, intron 3 of 20) protein_coding-intron (FBgn0262869, intron 2 of 19) 12457 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4523 chr2R 6184210 6184361 + 11 NA exon (FBgn0033504, exon 6 of 11) protein_coding-exon (FBgn0033504, exon 6 of 11) 12991 FBgn0028426 FBgn0028426 FBtr0088360 JhI-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6975 chr3L 3072405 3072496 + 11 NA promoter-TSS (FBgn0035397) protein_coding-promoter-TSS (FBgn0035397) -757 FBgn0035397 FBgn0035397 FBtr0072996 CG11486 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11146 chr3R 16679836 16679970 + 11 NA promoter-TSS (FBgn0259215) protein_coding-promoter-TSS (FBgn0259215) 499 FBgn0259215 FBgn0259215 FBtr0299719 Ir93a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10119 chr3R 9653041 9653133 + 11 NA promoter-TSS (FBgn0262992) ncRNA-promoter-TSS (FBgn0262992) 345 FBgn0002862 FBgn0002862 FBtr0082884 Mst87F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10870 chr3R 14865446 14865589 + 11 NA exon (FBgn0038676, exon 2 of 3) protein_coding-exon (FBgn0038676, exon 2 of 3) 6261 FBgn0038676 FBgn0038676 FBtr0273301 CG6026 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4193 chr2R 3733296 3733363 + 11 NA exon (FBgn0085390, exon 2 of 10) protein_coding-exon (FBgn0085390, exon 2 of 10) 13458 FBgn0040780 FBgn0040780 FBtr0113332 CG12821 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8307 chr3L 16845808 16845885 + 11 NA TTS (FBgn0036668) protein_coding-TTS (FBgn0036668) -3173 FBgn0003410 FBgn0003410 FBtr0075333 sina protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13703 chrX 13181974 13182078 + 11 NA promoter-TSS (FBgn0030466) protein_coding-promoter-TSS (FBgn0030466) -370 FBgn0030466 FBgn0030466 FBtr0073756 CG15744 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8863 chr3LHet 840573 840715 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5999 chr2R 18646738 18646853 + 11 NA TTS (FBgn0050267) ncRNA-TTS (FBgn0050267) 3125 FBgn0050267 FBgn0050267 FBtr0309275 CR30267 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10067 chr3R 9263622 9263676 + 11 NA TTS (FBgn0261814) ncRNA-TTS (FBgn0261814) 1282 FBgn0261814 FBgn0261814 FBtr0303300 CR42756 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8442 chr3L 17801592 17801798 + 11 NA TTS (FBgn0036756) protein_coding-TTS (FBgn0036756) 209 FBgn0052191 FBgn0052191 FBtr0307509 CG32191 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8585 chr3L 20095560 20095786 + 11 NA exon (FBgn0036935, exon 1 of 5) protein_coding-exon (FBgn0036935, exon 1 of 5) 1254 FBgn0036935 FBgn0036935 FBtr0074870 CG14186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11574 chr3R 22073759 22073833 + 11 NA intron (FBgn0261708, intron 2 of 2) ncRNA-intron (FBgn0261708, intron 2 of 2) 12749 FBgn0261708 FBgn0261708 FBtr0303214 CR42745 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_9181 chr3R 2319738 2319894 + 11 NA exon (FBgn0037448, exon 7 of 7) protein_coding-exon (FBgn0037448, exon 7 of 7) 2017 FBgn0011919 FBgn0011919 FBtr0081706 tRNA:M2:83F tRNA Nup98-S2-pascual-garcia2017_R1_peak_4341 chr2R 4765674 4765916 + 11 NA exon (FBgn0011286, exon 17 of 27) protein_coding-exon (FBgn0011286, exon 17 of 27) 13146 FBgn0033337 FBgn0033337 FBtr0330246 CG8272 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13710 chrX 13241612 13241766 + 11 NA Intergenic Intergenic 9302 FBgn0030474 FBgn0030474 FBtr0073766 CG15747 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4577 chr2R 6554771 6554915 + 11 NA Intergenic Intergenic -6007 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12496 chr3R 25950285 25950534 + 11 NA promoter-TSS (FBgn0040625) protein_coding-promoter-TSS (FBgn0040625) -1424 FBgn0040625 FBgn0040625 FBtr0302312 CG18682 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_268 chr2L 1464621 1464740 + 11 NA Intergenic Intergenic 21954 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_181 chr2L 1218596 1218759 + 11 NA promoter-TSS (FBgn0259229) protein_coding-promoter-TSS (FBgn0259229) -641 FBgn0259229 FBgn0259229 FBtr0299796 CG42329 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9414 chr3R 3887956 3888034 + 11 NA intron (FBgn0037546, intron 1 of 3) protein_coding-intron (FBgn0037546, intron 1 of 3) 2989 FBgn0037546 FBgn0037546 FBtr0081789 CG7918 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3140 chr2L 20023067 20023134 + 11 NA Intergenic Intergenic 2711 FBgn0032839 FBgn0032839 FBtr0081350 CG10659 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2165 chr2L 15097849 15097924 + 11 NA TTS (FBgn0028879) protein_coding-TTS (FBgn0028879) -11519 FBgn0028878 FBgn0028878 FBtr0080704 CG15269 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12118 chr3R 24318538 24318608 + 11 NA exon (FBgn0013813, exon 10 of 47) protein_coding-exon (FBgn0013813, exon 10 of 47) 5898 FBgn0013813 FBgn0013813 FBtr0301303 Dhc98D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6371 chr2RHet 557476 557668 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12914 chr4 128092 128425 + 11 NA exon (FBgn0085432, exon 13 of 13) protein_coding-exon (FBgn0085432, exon 13 of 13) 21820 FBgn0011747 FBgn0011747 FBtr0089173 Ank protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1779 chr2L 13272374 13272535 + 11 NA exon (FBgn0032497, exon 4 of 11) protein_coding-exon (FBgn0032497, exon 4 of 11) -4922 FBgn0032498 FBgn0032498 FBtr0080459 CG6108 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2706 chr2L 17609065 17609248 + 11 NA Intergenic Intergenic 14491 FBgn0261089 FBgn0261089 FBtr0303255 Sytalpha protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2446 chr2L 16251741 16251860 + 11 NA promoter-TSS (FBgn0024734) protein_coding-promoter-TSS (FBgn0024734) 4355 FBgn0024734 FBgn0024734 FBtr0332357 PRL-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4153 chr2R 3311931 3312111 + 11 NA exon (FBgn0003460, exon 2 of 7) protein_coding-exon (FBgn0003460, exon 2 of 7) 4077 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11089 chr3R 16234739 16234793 + 11 NA exon (FBgn0038796, exon 1 of 1) protein_coding-exon (FBgn0038796, exon 1 of 1) 779 FBgn0038796 FBgn0038796 FBtr0083885 CG10881 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_220 chr2L 1361458 1361863 + 11 NA promoter-TSS (FBgn0053126) protein_coding-promoter-TSS (FBgn0053126) 72 FBgn0053126 FBgn0053126 FBtr0329947 NLaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7422 chr3L 8611814 8611944 + 11 NA exon (FBgn0035915, exon 2 of 3) protein_coding-exon (FBgn0035915, exon 2 of 3) -1109 FBgn0052351 FBgn0052351 FBtr0076639 S-Lap2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8554 chr3L 19239141 19239221 + 11 NA Intergenic Intergenic -5942 FBgn0264484 FBgn0264484 FBtr0332796 CR43892 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10126 chr3R 9684122 9684274 + 11 NA Intergenic Intergenic -3022 FBgn0038186 FBgn0038186 FBtr0082881 CG14362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12261 chr3R 24920536 24920660 + 11 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 17944 FBgn0039634 FBgn0039634 FBtr0085416 CG11874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8065 chr3L 14567709 14567812 + 11 NA Intergenic Intergenic 7220 FBgn0261816 FBgn0261816 FBtr0303303 CG42758 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12179 chr3R 24551685 24551851 + 11 NA exon (FBgn0027655, exon 25 of 29) protein_coding-exon (FBgn0027655, exon 25 of 29) 18717 FBgn0039595 FBgn0039595 FBtr0308641 AR-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9598 chr3R 5283801 5283855 + 11 NA exon (FBgn0037697, exon 4 of 4) protein_coding-exon (FBgn0037697, exon 4 of 4) 1070 FBgn0037697 FBgn0037697 FBtr0082042 CG9363 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12435 chr3R 25544163 25544468 + 11 NA promoter-TSS (FBgn0039686) protein_coding-promoter-TSS (FBgn0039686) -1697 FBgn0039685 FBgn0039685 FBtr0085462 Obp99b protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5514 chr2R 14477325 14477472 + 11 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 21862 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4082 chr2R 2776082 2776255 + 11 NA TTS (FBgn0033115) protein_coding-TTS (FBgn0033115) 3045 FBgn0033115 FBgn0033115 FBtr0086164 Spn42De protein_coding Nup98-S2-pascual-garcia2017_R1_peak_215 chr2L 1347815 1347869 + 11 NA Intergenic Intergenic 3362 FBgn0026141 FBgn0026141 FBtr0305553 Cdlc2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5187 chr2R 11423542 11423599 + 11 NA exon (FBgn0050471, exon 3 of 6) protein_coding-exon (FBgn0050471, exon 3 of 6) -2148 FBgn0050467 FBgn0050467 FBtr0087334 CG30467 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5880 chr2R 17475808 17475961 + 11 NA Intergenic Intergenic -2007 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9590 chr3R 5154227 5154344 + 11 NA promoter-TSS (FBgn0037676) protein_coding-promoter-TSS (FBgn0037676) -58 FBgn0037676 FBgn0037676 FBtr0301210 CG8861 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8664 chr3L 21812842 21812896 + 11 NA Intergenic Intergenic -2228 FBgn0022936 FBgn0022936 FBtr0078439 CycH protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2935 chr2L 18797693 18797807 + 11 NA Intergenic Intergenic 7597 FBgn0264362 FBgn0264362 FBtr0332209 CG43814 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11251 chr3R 17597093 17597188 + 11 NA exon (FBgn0027575, exon 12 of 13) protein_coding-exon (FBgn0027575, exon 12 of 13) 1867 FBgn0038901 FBgn0038901 FBtr0084131 burs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_875 chr2L 6350101 6350217 + 11 NA exon (FBgn0031801, exon 3 of 3) protein_coding-exon (FBgn0031801, exon 3 of 3) 875 FBgn0031801 FBgn0031801 FBtr0079282 CG9498 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11413 chr3R 20109483 20109581 + 11 NA promoter-TSS (FBgn0039178) protein_coding-promoter-TSS (FBgn0039178) -324 FBgn0039178 FBgn0039178 FBtr0084601 CG6356 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10288 chr3R 11228755 11228865 + 11 NA TTS (FBgn0262483) protein_coding-TTS (FBgn0262483) 2417 FBgn0038337 FBgn0038337 FBtr0083106 CG6125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3361 chr2L 21247383 21247757 + 11 NA intron (FBgn0261239, intron 2 of 7) protein_coding-intron (FBgn0261239, intron 2 of 4) 10320 FBgn0261239 FBgn0261239 FBtr0081478 Hr39 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5152 chr2R 11111744 11111870 + 11 NA TTS (FBgn0034002) protein_coding-TTS (FBgn0034002) -3890 FBgn0001187 FBgn0001187 FBtr0087399 Hex-C protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2115 chr2L 14911202 14911359 + 11 NA intron (FBgn0259213, intron 19 of 19) protein_coding-intron (FBgn0259213, intron 19 of 19) -13455 FBgn0028887 FBgn0028887 FBtr0080675 CG3491 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_944 chr2L 6934295 6934359 + 11 NA exon (FBgn0031869, exon 12 of 16) protein_coding-exon (FBgn0031869, exon 12 of 16) 2206 FBgn0262877 FBgn0262877 FBtr0306284 CG43232 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2476 chr2L 16500666 16500847 + 11 NA intron (FBgn0032586, intron 2 of 4) protein_coding-intron (FBgn0032586, intron 1 of 3) 9216 FBgn0032586 FBgn0032586 FBtr0333486 Tpr2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6929 chr3L 2437659 2437713 + 11 NA intron (FBgn0261551, intron 2 of 6) protein_coding-intron (FBgn0261551, intron 3 of 9) 19731 FBgn0261551 FBgn0261551 FBtr0302675 CG42669 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4500 chr2R 5974149 5974282 + 11 NA promoter-TSS (FBgn0033484) protein_coding-promoter-TSS (FBgn0033484) 353 FBgn0028560 FBgn0028560 FBtr0089674 sut4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8366 chr3L 17275014 17275216 + 11 NA Intergenic Intergenic 17599 FBgn0036705 FBgn0036705 FBtr0075213 CG13723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1578 chr2L 11793648 11793751 + 11 NA TTS (FBgn0020309) protein_coding-TTS (FBgn0020309) 384 FBgn0032377 FBgn0032377 FBtr0080264 CG14937 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1776 chr2L 13234685 13234825 + 11 NA promoter-TSS (FBgn0032493) protein_coding-promoter-TSS (FBgn0032493) -122 FBgn0032493 FBgn0032493 FBtr0080481 CG15479 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6719 chr3L 451172 451233 + 11 NA exon (FBgn0001316, exon 9 of 19) protein_coding-exon (FBgn0001316, exon 9 of 19) -3070 FBgn0001316 FBgn0001316 FBtr0112808 klar protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6346 chr2RHet 447119 447251 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_5348 chr2R 13017082 13017243 + 11 NA exon (FBgn0034197, exon 2 of 3) protein_coding-exon (FBgn0034197, exon 2 of 3) 824 FBgn0034197 FBgn0034197 FBtr0086984 Cda9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5102 chr2R 10688262 10688316 + 11 NA intron (FBgn0001319, intron 1 of 11) protein_coding-intron (FBgn0001319, intron 1 of 11) -3757 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding Nup98-S2-pascual-garcia2017_R1_peak_947 chr2L 6977639 6977778 + 11 NA exon (FBgn0031879, exon 8 of 12) protein_coding-exon (FBgn0031879, exon 8 of 12) 5465 FBgn0262616 FBgn0262616 FBtr0305347 CR43142 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5251 chr2R 12061029 12061104 + 11 NA exon (FBgn0034085, exon 12 of 18) protein_coding-exon (FBgn0034085, exon 12 of 18) -2700 FBgn0034084 FBgn0034084 FBtr0087249 CG8435 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4072 chr2R 2679901 2679966 + 11 NA intron (FBgn0085421, intron 3 of 19) protein_coding-intron (FBgn0085421, intron 3 of 19) -10937 FBgn0000473 FBgn0000473 FBtr0086133 Cyp6a2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11777 chr3R 22998740 22998869 + 11 NA exon (FBgn0004197, exon 15 of 15) protein_coding-exon (FBgn0004197, exon 15 of 15) 7364 FBgn0003482 FBgn0003482 FBtr0085116 spn-D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9072 chr3R 1366778 1366928 + 11 NA exon (FBgn0037336, exon 13 of 13) protein_coding-exon (FBgn0037336, exon 13 of 13) 6637 FBgn0037336 FBgn0037336 FBtr0078762 CG2519 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10578 chr3R 12857718 12857884 + 11 NA exon (FBgn0051268, exon 2 of 3) protein_coding-exon (FBgn0051268, exon 2 of 3) 262 FBgn0051268 FBgn0051268 FBtr0307190 CG31268 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12711 chr3R 27272969 27273023 + 11 NA intron (FBgn0261988, intron 3 of 12) protein_coding-intron (FBgn0261988, intron 3 of 12) 12595 FBgn0039848 FBgn0039848 FBtr0085810 lox protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6951 chr3L 2826206 2826260 + 11 NA intron (FBgn0263392, intron 5 of 10) protein_coding-intron (FBgn0263392, intron 4 of 9) 43978 FBgn0035375 FBgn0035375 FBtr0333442 pgant6 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4160 chr2R 3319093 3319316 + 11 NA intron (FBgn0003460, intron 6 of 6) protein_coding-intron (FBgn0003460, intron 6 of 6) -3106 FBgn0033168 FBgn0033168 FBtr0089004 CG11145 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12024 chr3R 23981568 23981704 + 11 NA intron (FBgn0085383, intron 2 of 8) protein_coding-intron (FBgn0085383, intron 2 of 8) 9034 FBgn0085383 FBgn0085383 FBtr0304917 CG34354 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11303 chr3R 18119759 18119904 + 11 NA exon (FBgn0051163, exon 19 of 19) protein_coding-exon (FBgn0051163, exon 19 of 19) 1183 FBgn0262382 FBgn0262382 FBtr0304229 mir-1010 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_11780 chr3R 23002158 23002285 + 11 NA exon (FBgn0004197, exon 11 of 15) protein_coding-exon (FBgn0004197, exon 11 of 15) 10781 FBgn0003482 FBgn0003482 FBtr0085116 spn-D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11969 chr3R 23793201 23793255 + 11 NA TTS (FBgn0039566) protein_coding-TTS (FBgn0039566) 4090 FBgn0039566 FBgn0039566 FBtr0085257 CG4849 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11543 chr3R 21903320 21903416 + 11 NA exon (FBgn0039411, exon 10 of 11) protein_coding-exon (FBgn0039411, exon 10 of 11) -14635 FBgn0039408 FBgn0039408 FBtr0084971 CG14551 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2500 chr2L 16656753 16656822 + 11 NA promoter-TSS (FBgn0259735) protein_coding-promoter-TSS (FBgn0259735) -328 FBgn0259735 FBgn0259735 FBtr0300005 CG42389 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4724 chr2R 7699000 7699152 + 11 NA exon (FBgn0033652, exon 4 of 4) protein_coding-exon (FBgn0033652, exon 4 of 4) -13794 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3379 chr2L 21324587 21324667 + 11 NA Intergenic Intergenic -2033 FBgn0261586 FBgn0261586 FBtr0302900 CG42696 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1330 chr2L 9328864 9328967 + 11 NA exon (FBgn0032109, exon 4 of 6) protein_coding-exon (FBgn0032109, exon 4 of 6) 1171 FBgn0032109 FBgn0032109 FBtr0273186 CG17005 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_462 chr2L 3080566 3080741 + 11 NA exon (FBgn0015600, exon 8 of 11) protein_coding-exon (FBgn0015600, exon 8 of 11) 22191 FBgn0027571 FBgn0027571 FBtr0290093 CG3523 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3214 chr2L 20476993 20477063 + 11 NA TTS (FBgn0262879) protein_coding-TTS (FBgn0262879) 521 FBgn0262879 FBgn0262879 FBtr0306286 CG43234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1234 chr2L 8855883 8855978 + 11 NA Intergenic Intergenic -6846 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11407 chr3R 19941801 19941897 + 11 NA promoter-TSS (FBgn0039151) protein_coding-promoter-TSS (FBgn0039151) 195 FBgn0039151 FBgn0039151 FBtr0084585 CG13607 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12443 chr3R 25597877 25597931 + 11 NA promoter-TSS (FBgn0001297) protein_coding-promoter-TSS (FBgn0001297) 8549 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5347 chr2R 12956164 12956327 + 11 NA exon (FBgn0050460, exon 4 of 5) protein_coding-exon (FBgn0050460, exon 4 of 5) 3169 FBgn0050460 FBgn0050460 FBtr0302611 CG30460 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13076 chrU 135529 135808 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12206 chr3R 24608172 24608272 + 11 NA Intergenic Intergenic -7117 FBgn0085324 FBgn0085324 FBtr0112491 CG34295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7895 chr3L 13315379 13315433 + 11 NA Intergenic Intergenic -6829 FBgn0040814 FBgn0040814 FBtr0075837 CG14113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_465 chr2L 3086829 3086971 + 11 NA promoter-TSS (FBgn0015600) protein_coding-promoter-TSS (FBgn0015600) 21242 FBgn0015600 FBgn0015600 FBtr0112883 toc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1242 chr2L 8865038 8865162 + 11 NA promoter-TSS (FBgn0052983) protein_coding-promoter-TSS (FBgn0052983) 236 FBgn0052988 FBgn0052988 FBtr0079736 CG32988 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10185 chr3R 10213128 10213269 + 11 NA Intergenic Intergenic -5777 FBgn0038225 FBgn0038225 FBtr0082940 soti protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6934 chr3L 2524823 2525081 + 11 NA TTS (FBgn0260480) protein_coding-TTS (FBgn0260480) 2021 FBgn0260480 FBgn0260480 FBtr0072962 CG32295 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4783 chr2R 8002045 8002111 + 11 NA intron (FBgn0086677, intron 1 of 2) protein_coding-intron (FBgn0086677, intron 1 of 2) 4767 FBgn0086677 FBgn0086677 FBtr0088021 jeb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2257 chr2L 15461336 15461530 + 11 NA Intergenic Intergenic 16836 FBgn0003448 FBgn0003448 FBtr0080739 sna protein_coding Nup98-S2-pascual-garcia2017_R1_peak_572 chr2L 3941242 3941296 + 11 NA intron (FBgn0051774, intron 3 of 9) protein_coding-intron (FBgn0051774, intron 3 of 8) -26981 FBgn0051773 FBgn0051773 FBtr0077509 CG31773 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6216 chr2R 20408374 20408484 + 11 NA TTS (FBgn0035016) protein_coding-TTS (FBgn0035016) 1483 FBgn0259187 FBgn0259187 FBtr0302288 Ir60d protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5346 chr2R 12954569 12954666 + 11 NA TTS (FBgn0034187) protein_coding-TTS (FBgn0034187) 4335 FBgn0034187 FBgn0034187 FBtr0300277 CG6967 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3470 chr2L 21799494 21799708 + 11 NA Intergenic Intergenic -4171 FBgn0051612 FBgn0051612 FBtr0300999 CG31612 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5018 chr2R 9943316 9943391 + 11 NA exon (FBgn0002643, exon 5 of 7) protein_coding-exon (FBgn0002643, exon 5 of 7) 24169 FBgn0002643 FBgn0002643 FBtr0087598 mam protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5378 chr2R 13250893 13251043 + 11 NA exon (FBgn0261642, exon 8 of 8) protein_coding-exon (FBgn0261642, exon 8 of 8) 28382 FBgn0050232 FBgn0050232 FBtr0086965 tRNA:CR30232 tRNA Nup98-S2-pascual-garcia2017_R1_peak_9386 chr3R 3678226 3678321 + 11 NA exon (FBgn0085413, exon 11 of 12) protein_coding-exon (FBgn0085413, exon 11 of 12) 34182 FBgn0037525 FBgn0037525 FBtr0300826 CG17816 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8394 chr3L 17489907 17490033 + 11 NA intron (FBgn0036732, intron 2 of 8) protein_coding-intron (FBgn0036732, intron 2 of 8) 1990 FBgn0052185 FBgn0052185 FBtr0075174 edin protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10656 chr3R 13472391 13472564 + 11 NA promoter-TSS (FBgn0038532) protein_coding-promoter-TSS (FBgn0038532) 0 FBgn0051580 FBgn0051580 FBtr0083492 tRNA:CR31580 tRNA Nup98-S2-pascual-garcia2017_R1_peak_4102 chr2R 2934825 2934926 + 11 NA exon (FBgn0033134, exon 2 of 5) protein_coding-exon (FBgn0033134, exon 2 of 5) 1597 FBgn0033134 FBgn0033134 FBtr0089032 Tsp42El protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11716 chr3R 22584211 22584345 + 11 NA Intergenic Intergenic 20930 FBgn0039454 FBgn0039454 FBtr0085043 CG14247 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10258 chr3R 10892499 10892687 + 11 NA exon (FBgn0038282, exon 4 of 8) protein_coding-exon (FBgn0038282, exon 4 of 8) 10334 FBgn0038282 FBgn0038282 FBtr0089376 dpr9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6129 chr2R 19631327 19631484 + 11 NA intron (FBgn0000562, intron 2 of 7) protein_coding-intron (FBgn0000562, intron 2 of 7) 2943 FBgn0000562 FBgn0000562 FBtr0114586 egl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11326 chr3R 18587826 18587908 + 11 NA exon (FBgn0039023, exon 1 of 1) protein_coding-exon (FBgn0039023, exon 1 of 1) -1074 FBgn0039022 FBgn0039022 FBtr0084319 CG4725 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13725 chrX 13597903 13597977 + 11 NA exon (FBgn0052627, exon 1 of 10) protein_coding-exon (FBgn0052627, exon 1 of 10) 7245 FBgn0052627 FBgn0052627 FBtr0304972 NnaD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5917 chr2R 17862722 17862828 + 11 NA intron (FBgn0034674, intron 4 of 4) protein_coding-intron (FBgn0034674, intron 4 of 4) -1392 FBgn0041237 FBgn0041237 FBtr0071727 Gr58c protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5722 chr2R 16238046 16238137 + 11 NA Intergenic Intergenic 3550 FBgn0042198 FBgn0042198 FBtr0086289 CG16741 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7162 chr3L 6194355 6194522 + 11 NA TTS (FBgn0024921) protein_coding-TTS (FBgn0024921) 865 FBgn0035693 FBgn0035693 FBtr0077003 CG8219 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1340 chr2L 9381067 9381158 + 11 NA exon (FBgn0085395, exon 6 of 12) protein_coding-exon (FBgn0085395, exon 6 of 12) -6447 FBgn0012036 FBgn0012036 FBtr0332597 Aldh protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4907 chr2R 9128775 9129142 + 11 NA TTS (FBgn0033817) protein_coding-TTS (FBgn0033817) 1724 FBgn0033817 FBgn0033817 FBtr0087744 CG4688 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4754 chr2R 7820803 7820941 + 11 NA Intergenic Intergenic -6117 FBgn0033668 FBgn0033668 FBtr0088039 CG13188 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11529 chr3R 21855013 21855183 + 11 NA exon (FBgn0002631, exon 1 of 1) protein_coding-exon (FBgn0002631, exon 1 of 1) 359 FBgn0002631 FBgn0002631 FBtr0084979 HLHm5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2901 chr2L 18493510 18493573 + 11 NA exon (FBgn0032683, exon 7 of 12) protein_coding-exon (FBgn0032683, exon 7 of 12) 7316 FBgn0032683 FBgn0032683 FBtr0332323 kon protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8640 chr3L 21326287 21326578 + 11 NA intron (FBgn0086913, intron 4 of 5) protein_coding-intron (FBgn0086913, intron 3 of 4) -1883 FBgn0037073 FBgn0037073 FBtr0078342 CG7338 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5809 chr2R 17110080 17110198 + 11 NA intron (FBgn0034606, intron 3 of 7) protein_coding-intron (FBgn0034606, intron 3 of 7) -4855 FBgn0034605 FBgn0034605 FBtr0110814 CG15661 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5611 chr2R 15485242 15485338 + 11 NA TTS (FBgn0034459) protein_coding-TTS (FBgn0034459) 3995 FBgn0034459 FBgn0034459 FBtr0300829 CG16716 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9155 chr3R 2120020 2120101 + 11 NA Intergenic Intergenic 2436 FBgn0037422 FBgn0037422 FBtr0078605 Osi13 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_450 chr2L 2930582 2930677 + 11 NA intron (FBgn0041111, intron 3 of 12) protein_coding-intron (FBgn0041111, intron 3 of 12) -26282 FBgn0010263 FBgn0010263 FBtr0077640 Rbp9 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2319 chr2L 15635377 15635546 + 11 NA Intergenic Intergenic 5377 FBgn0028518 FBgn0028518 FBtr0080755 CG18480 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8704 chr3L 22515983 22516139 + 11 NA Intergenic Intergenic -4730 FBgn0262182 FBgn0262182 FBtr0304193 mir-957 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_3044 chr2L 19514947 19515015 + 11 NA exon (FBgn0032797, exon 6 of 17) protein_coding-exon (FBgn0032797, exon 6 of 17) 2220 FBgn0032797 FBgn0032797 FBtr0299519 CG10186 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4521 chr2R 6146580 6146717 + 11 NA exon (FBgn0033501, exon 2 of 5) protein_coding-exon (FBgn0033501, exon 2 of 5) 2454 FBgn0033501 FBgn0033501 FBtr0289962 CG12911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8797 chr3L 23874927 23875053 + 11 NA exon (FBgn0264569, exon 2 of 2) ncRNA-exon (FBgn0264569, exon 2 of 2) 1252 FBgn0264569 FBgn0264569 FBtr0333471 CR43941 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1215 chr2L 8819386 8819555 + 11 NA Intergenic Intergenic -6155 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11367 chr3R 19195622 19195819 + 11 NA Intergenic Intergenic -3112 FBgn0262009 FBgn0262009 FBtr0304566 CG42827 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3572 chr2L 22018928 22019036 + 11 NA promoter-TSS (FBgn0053987) ncRNA-promoter-TSS (FBgn0053987) -334 FBgn0053987 FBgn0053987 FBtr0100032 CR33987 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1032 chr2L 7940845 7941124 + 11 NA intron (FBgn0085450, intron 2 of 2) protein_coding-intron (FBgn0085450, intron 1 of 1) 36081 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13829 chrX 19765489 19765598 + 11 NA exon (FBgn0052529, exon 3 of 9) protein_coding-exon (FBgn0052529, exon 3 of 9) 5364 FBgn0052529 FBgn0052529 FBtr0306523 Hers protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8943 chr3R 106077 106221 + 11 NA promoter-TSS (FBgn0041605) protein_coding-promoter-TSS (FBgn0041605) -2634 FBgn0037229 FBgn0037229 FBtr0078980 CG9766 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10312 chr3R 11344728 11344842 + 11 NA Intergenic Intergenic -10225 FBgn0038346 FBgn0038346 FBtr0083157 CG14872 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3723 chr2L 22446559 22446647 + 11 NA exon (FBgn0040010, exon 2 of 2) protein_coding-exon (FBgn0040010, exon 2 of 2) 3631 FBgn0040010 FBgn0040010 FBtr0332631 CG17493 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_370 chr2L 2140972 2141046 + 11 NA exon (FBgn0031390, exon 10 of 15) protein_coding-exon (FBgn0031390, exon 10 of 15) 4166 FBgn0031390 FBgn0031390 FBtr0301660 tho2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4568 chr2R 6374101 6374197 + 11 NA TTS (FBgn0005630) protein_coding-TTS (FBgn0005630) 6484 FBgn0033529 FBgn0033529 FBtr0088274 CG17765 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1717 chr2L 12814129 12814183 + 11 NA Intergenic Intergenic -5816 FBgn0264366 FBgn0264366 FBtr0332211 CR43818 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4738 chr2R 7719731 7719890 + 11 NA intron (FBgn0033654, intron 2 of 3) protein_coding-intron (FBgn0033654, intron 2 of 3) 6940 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6830 chr3L 1424275 1424471 + 11 NA promoter-TSS (FBgn0035218) protein_coding-promoter-TSS (FBgn0035218) -902 FBgn0035218 FBgn0035218 FBtr0072720 CG9173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4623 chr2R 7019897 7019955 + 11 NA Intergenic Intergenic -3507 FBgn0033578 FBgn0033578 FBtr0088202 BBS4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9761 chr3R 6809838 6809919 + 11 NA Intergenic Intergenic -9327 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9934 chr3R 8342344 8342520 + 11 NA exon (FBgn0250910, exon 7 of 10) protein_coding-exon (FBgn0250910, exon 7 of 10) 7634 FBgn0013279 FBgn0013279 FBtr0082638 Hsp70Bc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8450 chr3L 17924808 17925147 + 11 NA Intergenic Intergenic -2131 FBgn0262792 FBgn0262792 FBtr0305908 CG43173 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6528 chr2RHet 1893716 1893821 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2491 chr2L 16569275 16569399 + 11 NA intron (FBgn0259735, intron 2 of 4) protein_coding-intron (FBgn0259735, intron 2 of 2) -19378 FBgn0032588 FBgn0032588 FBtr0080872 CG5968 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8155 chr3L 15609375 15609474 + 11 NA intron (FBgn0259236, intron 1 of 1) protein_coding-intron (FBgn0259236, intron 1 of 1) -3577 FBgn0036522 FBgn0036522 FBtr0075570 CG7372 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10272 chr3R 11014560 11014620 + 11 NA exon (FBgn0038295, exon 10 of 11) protein_coding-exon (FBgn0038295, exon 10 of 11) 2817 FBgn0038295 FBgn0038295 FBtr0083028 Gyc88E protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8422 chr3L 17672831 17672979 + 11 NA intron (FBgn0085280, intron 3 of 3) protein_coding-intron (FBgn0085280, intron 3 of 3) 8009 FBgn0085280 FBgn0085280 FBtr0301012 CG34251 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1220 chr2L 8828008 8828062 + 11 NA exon (FBgn0029123, exon 1 of 1) protein_coding-exon (FBgn0029123, exon 1 of 1) 2410 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_913 chr2L 6740076 6740146 + 11 NA promoter-TSS (FBgn0031854) protein_coding-promoter-TSS (FBgn0031854) 65 FBgn0031854 FBgn0031854 FBtr0079305 TTLL3A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_155 chr2L 1034004 1034145 + 11 NA exon (FBgn0031294, exon 2 of 11) protein_coding-exon (FBgn0031294, exon 2 of 11) 508 FBgn0031294 FBgn0031294 FBtr0332270 IA-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13259 chrU 5510008 5510094 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_13758 chrX 15804132 15804220 + 11 NA promoter-TSS (FBgn0030706) protein_coding-promoter-TSS (FBgn0030706) -467 FBgn0010315 FBgn0010315 FBtr0300393 CycD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4527 chr2R 6209076 6209158 + 11 NA TTS (FBgn0261698) protein_coding-TTS (FBgn0261698) -1112 FBgn0250822 FBgn0250822 FBtr0112415 CG34222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10836 chr3R 14645751 14645920 + 11 NA intron (FBgn0038653, intron 1 of 3) protein_coding-intron (FBgn0038653, intron 1 of 2) -27765 FBgn0038652 FBgn0038652 FBtr0083679 CG7720 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11634 chr3R 22275883 22276080 + 11 NA promoter-TSS (FBgn0042710) protein_coding-promoter-TSS (FBgn0042710) -393 FBgn0042710 FBgn0042710 FBtr0085011 Hex-t2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2822 chr2L 18028081 18028190 + 11 NA intron (FBgn0243486, intron 2 of 14) protein_coding-intron (FBgn0243486, intron 2 of 14) 15728 FBgn0243486 FBgn0243486 FBtr0081029 rdo protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1396 chr2L 9886385 9886510 + 11 NA promoter-TSS (FBgn0032151) protein_coding-promoter-TSS (FBgn0032151) -197 FBgn0032151 FBgn0032151 FBtr0331284 nAcRalpha-30D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9759 chr3R 6794068 6794229 + 11 NA Intergenic Intergenic 18142 FBgn0037857 FBgn0037857 FBtr0082326 Tengl4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7497 chr3L 9466254 9466335 + 11 NA TTS (FBgn0052043) protein_coding-TTS (FBgn0052043) 139 FBgn0036003 FBgn0036003 FBtr0310528 CG14180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2922 chr2L 18728935 18729051 + 11 NA intron (FBgn0032707, intron 1 of 1) protein_coding-intron (FBgn0032707, intron 1 of 1) 2426 FBgn0032707 FBgn0032707 FBtr0301647 CG10348 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3198 chr2L 20384398 20384566 + 11 NA TTS (FBgn0032857) protein_coding-TTS (FBgn0032857) -2127 FBgn0032856 FBgn0032856 FBtr0081371 CG16798 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5329 chr2R 12646121 12646211 + 11 NA exon (FBgn0034155, exon 14 of 27) protein_coding-exon (FBgn0034155, exon 14 of 27) 3560 FBgn0034154 FBgn0034154 FBtr0087021 CG5267 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10855 chr3R 14773182 14773272 + 11 NA exon (FBgn0261262, exon 5 of 19) protein_coding-exon (FBgn0261262, exon 5 of 19) -2691 FBgn0263983 FBgn0263983 FBtr0330024 CG43732 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10431 chr3R 11961903 11962018 + 11 NA intron (FBgn0003319, intron 2 of 10) protein_coding-intron (FBgn0003319, intron 2 of 10) 7509 FBgn0003319 FBgn0003319 FBtr0083250 Sb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6836 chr3L 1460739 1460856 + 11 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 3 of 7) -3014 FBgn0004635 FBgn0004635 FBtr0072694 rho protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5690 chr2R 15999963 16000149 + 11 NA exon (FBgn0004364, exon 1 of 1) protein_coding-exon (FBgn0004364, exon 1 of 1) 1040 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1413 chr2L 10065670 10065761 + 11 NA exon (FBgn0032180, exon 13 of 14) protein_coding-exon (FBgn0032180, exon 13 of 14) 4844 FBgn0032178 FBgn0032178 FBtr0079938 Spn31A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11909 chr3R 23493141 23493212 + 11 NA exon (FBgn0039536, exon 13 of 29) protein_coding-exon (FBgn0039536, exon 13 of 29) 5015 FBgn0039536 FBgn0039536 FBtr0330112 CG18437 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2497 chr2L 16628766 16628994 + 11 NA intron (FBgn0259735, intron 3 of 5) protein_coding-intron (FBgn0259735, intron 2 of 4) 21457 FBgn0032590 FBgn0032590 FBtr0080871 CG4631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9656 chr3R 5987818 5988015 + 11 NA promoter-TSS (FBgn0037794) protein_coding-promoter-TSS (FBgn0037794) -866 FBgn0037794 FBgn0037794 FBtr0082184 CG6254 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_879 chr2L 6384532 6384668 + 11 NA exon (FBgn0259716, exon 1 of 1) protein_coding-exon (FBgn0259716, exon 1 of 1) 912 FBgn0259716 FBgn0259716 FBtr0299969 CG42370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3365 chr2L 21275430 21275624 + 11 NA exon (FBgn0032938, exon 6 of 11) protein_coding-exon (FBgn0032938, exon 6 of 11) 8746 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3115 chr2L 19879953 19880116 + 11 NA intron (FBgn0263873, intron 1 of 10) protein_coding-intron (FBgn0263873, intron 3 of 15) 12516 FBgn0032827 FBgn0032827 FBtr0081312 CG10481 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7145 chr3L 6049003 6049119 + 11 NA exon (FBgn0028980, exon 3 of 3) protein_coding-exon (FBgn0028980, exon 3 of 3) 825 FBgn0028980 FBgn0028980 FBtr0077043 tan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1120 chr2L 8612127 8612428 + 11 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) -7751 FBgn0051602 FBgn0051602 FBtr0079693 tRNA:CR31602 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1483 chr2L 10918893 10919036 + 11 NA exon (FBgn0261871, exon 6 of 8) protein_coding-exon (FBgn0261871, exon 6 of 8) -8429 FBgn0032315 FBgn0032315 FBtr0080175 CG14069 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9797 chr3R 7108856 7108918 + 11 NA intron (FBgn0051386, intron 3 of 4) ncRNA-intron (FBgn0051386, intron 3 of 4) 22443 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_203 chr2L 1308739 1308829 + 11 NA Intergenic Intergenic -20377 FBgn0011294 FBgn0011294 FBtr0077922 a5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7887 chr3L 13251721 13251775 + 11 NA intron (FBgn0023095, intron 3 of 3) protein_coding-intron (FBgn0023095, intron 3 of 4) 9101 FBgn0011844 FBgn0011844 FBtr0075834 tRNA:D2:69F tRNA Nup98-S2-pascual-garcia2017_R1_peak_10174 chr3R 10090702 10090769 + 11 NA exon (FBgn0003862, exon 9 of 9) protein_coding-exon (FBgn0003862, exon 9 of 9) -2595 FBgn0038218 FBgn0038218 FBtr0082951 CG14841 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_481 chr2L 3259257 3259434 + 11 NA Intergenic Intergenic -10092 FBgn0031513 FBgn0031513 FBtr0301033 CG3347 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9884 chr3R 7927423 7927477 + 11 NA intron (FBgn0051361, intron 1 of 6) protein_coding-intron (FBgn0051361, intron 2 of 6) 3642 FBgn0051361 FBgn0051361 FBtr0082543 dpr17 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10104 chr3R 9529627 9529681 + 11 NA TTS (FBgn0002937) protein_coding-TTS (FBgn0002937) 1526 FBgn0038172 FBgn0038172 FBtr0082845 Adgf-D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9869 chr3R 7765941 7765995 + 11 NA intron (FBgn0037963, intron 2 of 15) protein_coding-intron (FBgn0037963, intron 2 of 15) 8883 FBgn0037963 FBgn0037963 FBtr0082513 Cad87A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11760 chr3R 22864914 22865014 + 11 NA intron (FBgn0004842, intron 4 of 7) protein_coding-intron (FBgn0004842, intron 4 of 7) -9978 FBgn0029170 FBgn0029170 FBtr0085101 TwdlT protein_coding Nup98-S2-pascual-garcia2017_R1_peak_804 chr2L 5719665 5719719 + 11 NA exon (FBgn0031732, exon 2 of 3) protein_coding-exon (FBgn0031732, exon 2 of 3) 848 FBgn0031732 FBgn0031732 FBtr0332556 CG11149 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8991 chr3R 727908 727978 + 11 NA Intergenic Intergenic -4405 FBgn0004913 FBgn0004913 FBtr0100159 Gnf1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11226 chr3R 17428018 17428199 + 11 NA intron (FBgn0013984, intron 2 of 12) protein_coding-intron (FBgn0013984, intron 2 of 12) 10036 FBgn0263662 FBgn0263662 FBtr0310107 CR43653 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4487 chr2R 5806074 5806128 + 11 NA exon (FBgn0011656, exon 8 of 11) protein_coding-exon (FBgn0011656, exon 8 of 11) 7703 FBgn0033465 FBgn0033465 FBtr0308338 CG12140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8745 chr3L 23529523 23529639 + 11 NA Intergenic Intergenic -19444 FBgn0250816 FBgn0250816 FBtr0301725 AGO3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10588 chr3R 13015452 13015537 + 11 NA Intergenic Intergenic -29824 FBgn0038492 FBgn0038492 FBtr0083413 Mur89F protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11928 chr3R 23597352 23597520 + 11 NA intron (FBgn0085382, intron 11 of 11) protein_coding-intron (FBgn0085382, intron 11 of 11) 35174 FBgn0005659 FBgn0005659 FBtr0085224 Ets98B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11120 chr3R 16479089 16479238 + 11 NA promoter-TSS (FBgn0028422) protein_coding-promoter-TSS (FBgn0028422) -991 FBgn0028422 FBgn0028422 FBtr0083938 KaiRIA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_981 chr2L 7277115 7277206 + 11 NA promoter-TSS (FBgn0010453) protein_coding-promoter-TSS (FBgn0010453) 8 FBgn0010453 FBgn0010453 FBtr0089291 Wnt4 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1095 chr2L 8562915 8563167 + 11 NA intron (FBgn0011259, intron 2 of 20) protein_coding-intron (FBgn0011259, intron 2 of 21) -7847 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_138 chr2L 989969 990115 + 11 NA Intergenic Intergenic 36848 FBgn0031295 FBgn0031295 FBtr0310271 CG4375 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7742 chr3L 12205711 12205815 + 11 NA TTS (FBgn0260941) protein_coding-TTS (FBgn0260941) 1787 FBgn0260941 FBgn0260941 FBtr0301053 app protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7983 chr3L 13901385 13901611 + 11 NA exon (FBgn0026376, exon 7 of 7) protein_coding-exon (FBgn0026376, exon 7 of 7) -5162 FBgn0264006 FBgn0264006 FBtr0330416 dysc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8021 chr3L 14169488 14169548 + 11 NA exon (FBgn0000411, exon 2 of 2) protein_coding-exon (FBgn0000411, exon 2 of 2) 2202 FBgn0000411 FBgn0000411 FBtr0333034 D protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8073 chr3L 14654731 14654997 + 11 NA intron (FBgn0041604, intron 1 of 7) protein_coding-intron (FBgn0041604, intron 1 of 7) 10673 FBgn0262581 FBgn0262581 FBtr0304960 CG43121 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5221 chr2R 11770437 11770529 + 11 NA intron (FBgn0264089, intron 7 of 20) protein_coding-intron (FBgn0264089, intron 6 of 19) 13449 FBgn0053463 FBgn0053463 FBtr0087301 CG33463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9765 chr3R 6843352 6843585 + 11 NA intron (FBgn0083950, intron 5 of 13) protein_coding-intron (FBgn0083950, intron 5 of 15) 24263 FBgn0083950 FBgn0083950 FBtr0301070 CG34114 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11834 chr3R 23215040 23215145 + 11 NA intron (FBgn0016061, intron 12 of 16) protein_coding-intron (FBgn0016061, intron 12 of 16) -19505 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5143 chr2R 11025158 11025221 + 11 NA intron (FBgn0015371, intron 1 of 5) protein_coding-intron (FBgn0015371, intron 1 of 4) 7835 FBgn0262954 FBgn0262954 FBtr0112379 Rpb12 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_445 chr2L 2839171 2839307 + 11 NA promoter-TSS (FBgn0031468) protein_coding-promoter-TSS (FBgn0031468) 825 FBgn0031467 FBgn0031467 FBtr0077618 Cpr23B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5551 chr2R 14868497 14868563 + 11 NA Intergenic Intergenic 3511 FBgn0034411 FBgn0034411 FBtr0302494 CG18605 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4633 chr2R 7144418 7144582 + 11 NA exon (FBgn0033599, exon 2 of 7) protein_coding-exon (FBgn0033599, exon 2 of 7) 488 FBgn0033599 FBgn0033599 FBtr0088113 CG13223 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10230 chr3R 10666849 10666910 + 11 NA intron (FBgn0053555, intron 1 of 13) protein_coding-intron (FBgn0053555, intron 1 of 11) -3886 FBgn0038266 FBgn0038266 FBtr0082994 CG3610 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4723 chr2R 7698608 7698670 + 11 NA exon (FBgn0033652, exon 4 of 4) protein_coding-exon (FBgn0033652, exon 4 of 4) -14231 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1386 chr2L 9844762 9844896 + 11 NA intron (FBgn0032151, intron 3 of 13) protein_coding-intron (FBgn0032151, intron 2 of 13) -3460 FBgn0264266 FBgn0264266 FBtr0331283 CR43766 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13718 chrX 13365242 13365375 + 11 NA intron (FBgn0052635, intron 2 of 10) protein_coding-intron (FBgn0052635, intron 2 of 10) -13664 FBgn0085353 FBgn0085353 FBtr0112526 CG34324 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1960 chr2L 14388801 14388946 + 11 NA Intergenic Intergenic -7703 FBgn0020258 FBgn0020258 FBtr0080638 ppk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5516 chr2R 14488654 14488841 + 11 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 10513 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11265 chr3R 17663726 17663874 + 11 NA Intergenic Intergenic 5575 FBgn0041229 FBgn0041229 FBtr0084133 Gr93a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9606 chr3R 5464695 5464749 + 11 NA intron (FBgn0012344, intron 1 of 4) protein_coding-intron (FBgn0012344, intron 1 of 4) -1340 FBgn0012344 FBgn0012344 FBtr0112870 Dh44 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_744 chr2L 5378029 5378186 + 11 NA TTS (FBgn0262097) protein_coding-TTS (FBgn0262097) 2967 FBgn0262097 FBgn0262097 FBtr0310549 CG42850 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12285 chr3R 25062017 25062087 + 11 NA exon (FBgn0039656, exon 5 of 7) protein_coding-exon (FBgn0039656, exon 5 of 7) 2374 FBgn0039656 FBgn0039656 FBtr0085403 CG11951 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12934 chr4 546905 546988 + 11 NA exon (FBgn0004607, exon 6 of 14) protein_coding-exon (FBgn0004607, exon 6 of 14) 24510 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6839 chr3L 1488144 1488320 + 11 NA promoter-TSS (FBgn0086670) snoRNA-promoter-TSS (FBgn0086670) -507 FBgn0263839 FBgn0263839 FBtr0321280 CR43701 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7999 chr3L 14071910 14071964 + 11 NA intron (FBgn0005592, intron 1 of 2) protein_coding-intron (FBgn0005592, intron 2 of 3) 1772 FBgn0005592 FBgn0005592 FBtr0100676 btl protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5878 chr2R 17473157 17473477 + 11 NA TTS (FBgn0050222) protein_coding-TTS (FBgn0050222) 2320 FBgn0050222 FBgn0050222 FBtr0300458 CG30222 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5565 chr2R 14948790 14948982 + 11 NA TTS (FBgn0034416) protein_coding-TTS (FBgn0034416) 1960 FBgn0034416 FBgn0034416 FBtr0100137 CG15109 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10047 chr3R 9123647 9123847 + 11 NA promoter-TSS (FBgn0038136) protein_coding-promoter-TSS (FBgn0038136) -956 FBgn0038136 FBgn0038136 FBtr0082741 CG8774 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3063 chr2L 19679877 19679973 + 11 NA intron (FBgn0000464, intron 6 of 18) protein_coding-intron (FBgn0000464, intron 3 of 16) 21043 FBgn0005590 FBgn0005590 FBtr0081261 scw protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5452 chr2R 13940697 13940751 + 11 NA exon (FBgn0034295, exon 2 of 2) protein_coding-exon (FBgn0034295, exon 2 of 2) 845 FBgn0034295 FBgn0034295 FBtr0086808 CG10911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10373 chr3R 11705405 11705496 + 11 NA Intergenic Intergenic -9676 FBgn0051183 FBgn0051183 FBtr0083187 CG31183 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11567 chr3R 22010187 22010317 + 11 NA promoter-TSS (FBgn0051086) protein_coding-promoter-TSS (FBgn0051086) -721 FBgn0051086 FBgn0051086 FBtr0084989 CG31086 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1412 chr2L 10051613 10051769 + 11 NA TTS (FBgn0053301) protein_coding-TTS (FBgn0053301) 2209 FBgn0053301 FBgn0053301 FBtr0079935 CG33301 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12668 chr3R 27063844 27063972 + 11 NA intron (FBgn0051005, intron 6 of 7) protein_coding-intron (FBgn0051005, intron 6 of 7) -2905 FBgn0039833 FBgn0039833 FBtr0085770 CG15564 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1505 chr2L 11178281 11178413 + 11 NA promoter-TSS (FBgn0032354) protein_coding-promoter-TSS (FBgn0032354) -694 FBgn0032354 FBgn0032354 FBtr0080202 CG4788 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4822 chr2R 8359574 8359738 + 11 NA promoter-TSS (FBgn0033740) protein_coding-promoter-TSS (FBgn0033740) 236 FBgn0033742 FBgn0033742 FBtr0087935 CG8550 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4586 chr2R 6582996 6583050 + 11 NA intron (FBgn0024836, intron 2 of 5) protein_coding-intron (FBgn0024836, intron 2 of 5) 22173 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7507 chr3L 9595058 9595178 + 11 NA promoter-TSS (FBgn0036015) protein_coding-promoter-TSS (FBgn0036015) 495 FBgn0036016 FBgn0036016 FBtr0076380 CG3306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4728 chr2R 7705501 7705811 + 11 NA Intergenic Intergenic -7214 FBgn0033653 FBgn0033653 FBtr0088031 CG13192 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1101 chr2L 8575434 8575558 + 11 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 4608 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_284 chr2L 1505846 1505943 + 11 NA Intergenic Intergenic -2991 FBgn0031344 FBgn0031344 FBtr0077933 CG7420 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12808 chr3R 27786993 27787086 + 11 NA intron (FBgn0011224, intron 2 of 13) protein_coding-intron (FBgn0011224, intron 3 of 13) 19852 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding Nup98-S2-pascual-garcia2017_R1_peak_845 chr2L 6019960 6020190 + 11 NA promoter-TSS (FBgn0031763) protein_coding-promoter-TSS (FBgn0031763) -677 FBgn0001170 FBgn0001170 FBtr0079227 H2.0 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3897 chr2R 128612 128729 + 11 NA intron (FBgn0262117, intron 1 of 9) protein_coding-intron (FBgn0262117, intron 2 of 10) 1774 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6269 chr2R 20951860 20951950 + 11 NA exon (FBgn0001148, exon 2 of 2) protein_coding-exon (FBgn0001148, exon 2 of 2) 2403 FBgn0001148 FBgn0001148 FBtr0072444 gsb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3304 chr2L 20845435 20845615 + 11 NA exon (FBgn0051676, exon 2 of 3) protein_coding-exon (FBgn0051676, exon 2 of 3) -3832 FBgn0032894 FBgn0032894 FBtr0081425 CG14402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6121 chr2R 19576969 19577366 + 11 NA intron (FBgn0262728, intron 5 of 5) protein_coding-intron (FBgn0262728, intron 5 of 5) 1483 FBgn0262728 FBgn0262728 FBtr0301509 Pal2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3651 chr2L 22206784 22206876 + 11 NA intron (FBgn0259683, intron 4 of 6) protein_coding-intron (FBgn0259683, intron 4 of 6) 7435 FBgn0259683 FBgn0259683 FBtr0301086 Ir40a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4094 chr2R 2819041 2819278 + 11 NA exon (FBgn0053558, exon 10 of 16) protein_coding-exon (FBgn0053558, exon 10 of 16) 8208 FBgn0033117 FBgn0033117 FBtr0307183 CG3358 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2028 chr2L 14582417 14582759 + 11 NA Intergenic Intergenic 5646 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11356 chr3R 19092227 19092307 + 11 NA exon (FBgn0004882, exon 9 of 10) protein_coding-exon (FBgn0004882, exon 9 of 10) 3765 FBgn0004882 FBgn0004882 FBtr0301491 orb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12631 chr3R 26944008 26944088 + 11 NA Intergenic Intergenic 5191 FBgn0261395 FBgn0261395 FBtr0085738 Prosalpha3T protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2391 chr2L 16032763 16032858 + 11 NA intron (FBgn0028644, intron 3 of 7) protein_coding-intron (FBgn0028644, intron 3 of 7) -11742 FBgn0000182 FBgn0000182 FBtr0080805 BicC protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9611 chr3R 5554785 5554983 + 11 NA exon (FBgn0262477, exon 1 of 7) protein_coding-exon (FBgn0262477, exon 1 of 7) 281 FBgn0262477 FBgn0262477 FBtr0329937 FoxP protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9015 chr3R 928075 928403 + 11 NA Intergenic Intergenic 6661 FBgn0262605 FBgn0262605 FBtr0305279 CG43131 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1859 chr2L 13958233 13958427 + 11 NA intron (FBgn0261514, intron 1 of 4) protein_coding-intron (FBgn0261514, intron 1 of 4) 791 FBgn0261514 FBgn0261514 FBtr0304720 nimA protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1226 chr2L 8842740 8842963 + 11 NA Intergenic Intergenic 17226 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7860 chr3L 13067479 13067584 + 11 NA Intergenic Intergenic 8221 FBgn0263661 FBgn0263661 FBtr0310106 CR43652 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8675 chr3L 22057016 22057183 + 11 NA exon (FBgn0004514, exon 4 of 4) protein_coding-exon (FBgn0004514, exon 4 of 4) -1908 FBgn0037149 FBgn0037149 FBtr0078480 CG14561 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4584 chr2R 6580418 6580538 + 11 NA intron (FBgn0024836, intron 2 of 5) protein_coding-intron (FBgn0024836, intron 2 of 5) 19628 FBgn0024836 FBgn0024836 FBtr0300578 stan protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3712 chr2L 22370901 22370982 + 11 NA Intergenic Intergenic 16586 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7451 chr3L 8807720 8807958 + 11 NA Intergenic Intergenic 4344 FBgn0035933 FBgn0035933 FBtr0076582 CG13309 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_810 chr2L 5747064 5747270 + 11 NA exon (FBgn0031735, exon 1 of 1) protein_coding-exon (FBgn0031735, exon 1 of 1) 1010 FBgn0031735 FBgn0031735 FBtr0079136 CG11029 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6374 chr2RHet 566176 566592 + 11 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12375 chr3R 25455870 25455964 + 11 NA TTS (FBgn0015129) protein_coding-TTS (FBgn0015129) 11161 FBgn0039674 FBgn0039674 FBtr0085447 CG1907 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5318 chr2R 12572007 12572095 + 11 NA promoter-TSS (FBgn0050463) protein_coding-promoter-TSS (FBgn0050463) -553 FBgn0050463 FBgn0050463 FBtr0113381 CG30463 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1040 chr2L 8050075 8050191 + 11 NA exon (FBgn0031981, exon 5 of 6) protein_coding-exon (FBgn0031981, exon 5 of 6) 6662 FBgn0031981 FBgn0031981 FBtr0079541 CG7466 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_393 chr2L 2454635 2454751 + 11 NA promoter-TSS (FBgn0000490) protein_coding-promoter-TSS (FBgn0000490) -346 FBgn0000490 FBgn0000490 FBtr0310007 dpp protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9998 chr3R 8758072 8758363 + 11 NA intron (FBgn0038092, intron 4 of 6) protein_coding-intron (FBgn0038092, intron 4 of 6) 16373 FBgn0038092 FBgn0038092 FBtr0082684 beat-Vb protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1474 chr2L 10831803 10831879 + 11 NA exon (FBgn0011676, exon 2 of 19) protein_coding-exon (FBgn0011676, exon 2 of 19) 5670 FBgn0011676 FBgn0011676 FBtr0100487 Nos protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12438 chr3R 25556729 25556877 + 11 NA exon (FBgn0039688, exon 9 of 9) protein_coding-exon (FBgn0039688, exon 9 of 9) 5251 FBgn0039688 FBgn0039688 FBtr0085460 Kul protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5376 chr2R 13233214 13233482 + 11 NA intron (FBgn0261642, intron 2 of 7) protein_coding-intron (FBgn0261642, intron 2 of 3) -38541 FBgn0263709 FBgn0263709 FBtr0310348 CR43661 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10786 chr3R 14330579 14330657 + 11 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) 40690 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4840 chr2R 8589370 8589515 + 11 NA Intergenic Intergenic 1856 FBgn0033770 FBgn0033770 FBtr0113076 wuc protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3207 chr2L 20402698 20402814 + 11 NA Intergenic Intergenic -3362 FBgn0032857 FBgn0032857 FBtr0081370 CG10947 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8438 chr3L 17743822 17744025 + 11 NA promoter-TSS (FBgn0036751) protein_coding-promoter-TSS (FBgn0036751) -235 FBgn0036751 FBgn0036751 FBtr0075193 Adgf-B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12289 chr3R 25091253 25091330 + 11 NA Intergenic Intergenic -9789 FBgn0003525 FBgn0003525 FBtr0085397 stg protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1547 chr2L 11510222 11510369 + 11 NA intron (FBgn0032363, intron 8 of 11) protein_coding-intron (FBgn0032363, intron 6 of 9) 6740 FBgn0032363 FBgn0032363 FBtr0080247 CG6509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3340 chr2L 21079561 21079693 + 11 NA exon (FBgn0032911, exon 7 of 9) protein_coding-exon (FBgn0032911, exon 7 of 9) 2867 FBgn0053511 FBgn0053511 FBtr0091451 CG33511 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7889 chr3L 13270473 13270766 + 11 NA exon (FBgn0023095, exon 5 of 5) protein_coding-exon (FBgn0023095, exon 5 of 5) -2257 FBgn0052123 FBgn0052123 FBtr0075835 tRNA:CR32123:Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_11233 chr3R 17516557 17516640 + 11 NA intron (FBgn0051176, intron 1 of 2) protein_coding-intron (FBgn0051176, intron 1 of 2) -19126 FBgn0259113 FBgn0259113 FBtr0084115 DNApol-alpha180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8561 chr3L 19486652 19486761 + 11 NA exon (FBgn0036875, exon 4 of 5) protein_coding-exon (FBgn0036875, exon 4 of 5) 1575 FBgn0036875 FBgn0036875 FBtr0290043 CG9449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_353 chr2L 1971541 1971662 + 11 NA Intergenic Intergenic -2525 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8360 chr3L 17255056 17255110 + 11 NA intron (FBgn0264462, intron 1 of 1) ncRNA-intron (FBgn0264462, intron 1 of 1) 2322 FBgn0264466 FBgn0264466 FBtr0332784 CR43874 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8156 chr3L 15610066 15610120 + 11 NA intron (FBgn0259236, intron 1 of 1) protein_coding-intron (FBgn0259236, intron 1 of 1) -2908 FBgn0036522 FBgn0036522 FBtr0075570 CG7372 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6007 chr2R 18700228 18700389 + 11 NA exon (FBgn0086408, exon 1 of 6) protein_coding-exon (FBgn0086408, exon 1 of 6) -3671 FBgn0050271 FBgn0050271 FBtr0300927 CG30271 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11839 chr3R 23223512 23223633 + 10 NA exon (FBgn0016061, exon 7 of 17) protein_coding-exon (FBgn0016061, exon 7 of 17) -27985 FBgn0263453 FBgn0263453 FBtr0309308 CR43476 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7338 chr3L 7649988 7650061 + 10 NA exon (FBgn0261788, exon 5 of 6) protein_coding-exon (FBgn0261788, exon 5 of 6) -2172 FBgn0035807 FBgn0035807 FBtr0076821 CG7492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7894 chr3L 13310544 13310633 + 10 NA Intergenic Intergenic -11647 FBgn0040814 FBgn0040814 FBtr0075837 CG14113 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8499 chr3L 18286983 18287124 + 10 NA promoter-TSS (FBgn0262998) ncRNA-promoter-TSS (FBgn0262998) 309 FBgn0036784 FBgn0036784 FBtr0075132 CG5103 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7888 chr3L 13264703 13264780 + 10 NA intron (FBgn0023095, intron 4 of 4) protein_coding-intron (FBgn0023095, intron 4 of 4) -8135 FBgn0052123 FBgn0052123 FBtr0075835 tRNA:CR32123:Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_5883 chr2R 17480917 17481057 + 10 NA Intergenic Intergenic 3096 FBgn0053225 FBgn0053225 FBtr0300405 CG33225 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1231 chr2L 8850595 8850749 + 10 NA Intergenic Intergenic -12104 FBgn0052986 FBgn0052986 FBtr0079734 CG32986 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_114 chr2L 920146 920200 + 10 NA Intergenic Intergenic -2620 FBgn0028481 FBgn0028481 FBtr0305064 CG4341 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12883 chr3RHet 1894957 1895011 + 10 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_2198 chr2L 15215883 15216044 + 10 NA exon (FBgn0262875, exon 3 of 3) protein_coding-exon (FBgn0262875, exon 3 of 3) 741 FBgn0262875 FBgn0262875 FBtr0306282 CG43230 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1403 chr2L 9993959 9994073 + 10 NA exon (FBgn0000180, exon 5 of 5) protein_coding-exon (FBgn0000180, exon 5 of 5) 8430 FBgn0051875 FBgn0051875 FBtr0079973 CG31875 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11418 chr3R 20302723 20302847 + 10 NA Intergenic Intergenic 7666 FBgn0051128 FBgn0051128 FBtr0084638 CG31128 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12262 chr3R 24921140 24921374 + 10 NA intron (FBgn0039633, intron 1 of 7) protein_coding-intron (FBgn0039633, intron 2 of 8) 17285 FBgn0039634 FBgn0039634 FBtr0085416 CG11874 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11394 chr3R 19674010 19674079 + 10 NA exon (FBgn0085384, exon 9 of 13) protein_coding-exon (FBgn0085384, exon 9 of 13) 11308 FBgn0004185 FBgn0004185 FBtr0084528 snRNA:U1:95Ca snRNA Nup98-S2-pascual-garcia2017_R1_peak_5861 chr2R 17453640 17453707 + 10 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 9867 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5864 chr2R 17455572 17455834 + 10 NA intron (FBgn0034636, intron 3 of 5) protein_coding-intron (FBgn0034636, intron 2 of 4) 7837 FBgn0034636 FBgn0034636 FBtr0071692 CG10440 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2990 chr2L 19255331 19255515 + 10 NA Intergenic Intergenic 7470 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3231 chr2L 20521205 20521281 + 10 NA Intergenic Intergenic 26137 FBgn0054007 FBgn0054007 FBtr0100062 CG34007 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1339 chr2L 9377806 9377860 + 10 NA intron (FBgn0085395, intron 9 of 10) protein_coding-intron (FBgn0085395, intron 10 of 11) 5731 FBgn0264447 FBgn0264447 FBtr0332596 CR43865 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10607 chr3R 13136040 13136172 + 10 NA Intergenic Intergenic 22596 FBgn0263501 FBgn0263501 FBtr0309517 CR43490 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_8951 chr3R 319259 319365 + 10 NA exon (FBgn0085386, exon 14 of 14) protein_coding-exon (FBgn0085386, exon 14 of 14) 8549 FBgn0037255 FBgn0037255 FBtr0078928 Fip1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7689 chr3L 11792742 11792907 + 10 NA TTS (FBgn0004381) protein_coding-TTS (FBgn0004381) 1137 FBgn0036208 FBgn0036208 FBtr0076084 CG10361 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11648 chr3R 22331885 22331985 + 10 NA intron (FBgn0039431, intron 2 of 10) protein_coding-intron (FBgn0039431, intron 2 of 10) 29004 FBgn0039431 FBgn0039431 FBtr0302210 CG6490 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10583 chr3R 12927838 12927892 + 10 NA intron (FBgn0014141, intron 12 of 17) protein_coding-intron (FBgn0014141, intron 10 of 15) -3336 FBgn0014141 FBgn0014141 FBtr0089473 cher protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4183 chr2R 3600866 3601055 + 10 NA exon (FBgn0033215, exon 4 of 6) protein_coding-exon (FBgn0033215, exon 4 of 6) 832 FBgn0033215 FBgn0033215 FBtr0088928 CG1942 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9708 chr3R 6430941 6431065 + 10 NA exon (FBgn0001235, exon 1 of 12) protein_coding-exon (FBgn0001235, exon 1 of 12) 389 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding Nup98-S2-pascual-garcia2017_R1_peak_771 chr2L 5499815 5499941 + 10 NA Intergenic Intergenic -17741 FBgn0031707 FBgn0031707 FBtr0329966 CG14020 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5696 chr2R 16039830 16039961 + 10 NA Intergenic Intergenic 6257 FBgn0034481 FBgn0034481 FBtr0300692 CG11041 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9063 chr3R 1335559 1335699 + 10 NA exon (FBgn0010399, exon 15 of 15) protein_coding-exon (FBgn0010399, exon 15 of 15) -10893 FBgn0051547 FBgn0051547 FBtr0078765 CG31547 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7735 chr3L 12155291 12155374 + 10 NA intron (FBgn0036259, intron 1 of 2) protein_coding-intron (FBgn0036259, intron 1 of 2) 1503 FBgn0036259 FBgn0036259 FBtr0330196 CG9760 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6677 chr2RHet 2796027 2796135 + 10 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10293 chr3R 11244177 11244297 + 10 NA promoter-TSS (FBgn0262397) pre_miRNA-promoter-TSS (FBgn0262397) -732 FBgn0262397 FBgn0262397 FBtr0304297 mir-2c pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_8647 chr3L 21568418 21568517 + 10 NA TTS (FBgn0264567) ncRNA-TTS (FBgn0264567) 1236 FBgn0052441 FBgn0052441 FBtr0300057 CG32441 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2684 chr2L 17404174 17404236 + 10 NA exon (FBgn0020503, exon 9 of 9) protein_coding-exon (FBgn0020503, exon 9 of 9) 6201 FBgn0032634 FBgn0032634 FBtr0081011 Rpb11 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_542 chr2L 3692864 3692977 + 10 NA promoter-TSS (FBgn0031558) protein_coding-promoter-TSS (FBgn0031558) 262 FBgn0031559 FBgn0031559 FBtr0077549 CG3513 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8072 chr3L 14619696 14619807 + 10 NA intron (FBgn0036433, intron 1 of 3) protein_coding-intron (FBgn0036433, intron 1 of 3) 3855 FBgn0036433 FBgn0036433 FBtr0301239 CG9628 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10894 chr3R 15102040 15102134 + 10 NA Intergenic Intergenic -11992 FBgn0263405 FBgn0263405 FBtr0309184 CR43451 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_314 chr2L 1605375 1605470 + 10 NA exon (FBgn0261509, exon 9 of 11) protein_coding-exon (FBgn0261509, exon 9 of 11) 5703 FBgn0051935 FBgn0051935 FBtr0077916 CG31935 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10026 chr3R 8911325 8911501 + 10 NA promoter-TSS (FBgn0262365) protein_coding-promoter-TSS (FBgn0262365) -533 FBgn0262365 FBgn0262365 FBtr0304647 CG43063 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9523 chr3R 4747818 4747891 + 10 NA intron (FBgn0262614, intron 1 of 13) protein_coding-intron (FBgn0262614, intron 1 of 13) -12999 FBgn0003015 FBgn0003015 FBtr0081956 osk protein_coding Nup98-S2-pascual-garcia2017_R1_peak_98 chr2L 881547 881664 + 10 NA intron (FBgn0031292, intron 10 of 14) protein_coding-intron (FBgn0031292, intron 10 of 14) 3536 FBgn0031292 FBgn0031292 FBtr0332181 CG15824 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5902 chr2R 17725193 17725262 + 10 NA exon (FBgn0034665, exon 1 of 1) protein_coding-exon (FBgn0034665, exon 1 of 1) 1076 FBgn0034665 FBgn0034665 FBtr0071738 CG4372 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4856 chr2R 8703412 8703466 + 10 NA Intergenic Intergenic 9257 FBgn0040755 FBgn0040755 FBtr0087857 CG17580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11147 chr3R 16688709 16688797 + 10 NA exon (FBgn0038837, exon 6 of 13) protein_coding-exon (FBgn0038837, exon 6 of 13) 3198 FBgn0038837 FBgn0038837 FBtr0083987 CG3822 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8671 chr3L 21930484 21930604 + 10 NA exon (FBgn0037140, exon 4 of 5) protein_coding-exon (FBgn0037140, exon 4 of 5) 2740 FBgn0037140 FBgn0037140 FBtr0078471 CG7442 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9117 chr3R 1875690 1875745 + 10 NA Intergenic Intergenic 7542 FBgn0037398 FBgn0037398 FBtr0273439 CG15580 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12002 chr3R 23903270 23903539 + 10 NA intron (FBgn0085391, intron 4 of 9) protein_coding-intron (FBgn0085391, intron 4 of 9) 51070 FBgn0085391 FBgn0085391 FBtr0112583 CG34362 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4328 chr2R 4721374 4721508 + 10 NA exon (FBgn0024189, exon 17 of 22) protein_coding-exon (FBgn0024189, exon 17 of 22) 7545 FBgn0050350 FBgn0050350 FBtr0088636 CG30350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8669 chr3L 21902246 21902393 + 10 NA intron (FBgn0262737, intron 3 of 10) protein_coding-intron (FBgn0262737, intron 2 of 8) -22180 FBgn0264470 FBgn0264470 FBtr0332737 CR43878 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1775 chr2L 13227317 13227465 + 10 NA promoter-TSS (FBgn0032490) protein_coding-promoter-TSS (FBgn0032490) -462 FBgn0032490 FBgn0032490 FBtr0080446 CG16813 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7579 chr3L 10613948 10614018 + 10 NA Intergenic Intergenic 2693 FBgn0260396 FBgn0260396 FBtr0300668 CG42521 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4713 chr2R 7626876 7627006 + 10 NA Intergenic Intergenic 27174 FBgn0033649 FBgn0033649 FBtr0113070 pyr protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1104 chr2L 8580220 8580401 + 10 NA intron (FBgn0011259, intron 3 of 20) protein_coding-intron (FBgn0011259, intron 3 of 21) 9422 FBgn0051895 FBgn0051895 FBtr0079692 tRNA:CR31895 tRNA Nup98-S2-pascual-garcia2017_R1_peak_1253 chr2L 8875964 8876093 + 10 NA Intergenic Intergenic 9261 FBgn0032072 FBgn0032072 FBtr0079738 CG9483 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12075 chr3R 24143003 24143101 + 10 NA TTS (FBgn0261618) protein_coding-TTS (FBgn0261618) -12725 FBgn0039577 FBgn0039577 FBtr0301672 CG12516 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2154 chr2L 15049442 15049684 + 10 NA exon (FBgn0000317, exon 6 of 12) protein_coding-exon (FBgn0000317, exon 6 of 12) 8285 FBgn0000317 FBgn0000317 FBtr0080724 ck protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7348 chr3L 7816525 7816679 + 10 NA intron (FBgn0016694, intron 1 of 5) protein_coding-intron (FBgn0016694, intron 1 of 4) -13677 FBgn0052369 FBgn0052369 FBtr0076783 CG32369 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1371 chr2L 9679843 9679954 + 10 NA Intergenic Intergenic 19395 FBgn0000273 FBgn0000273 FBtr0079852 Pka-C1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6170 chr2R 20132331 20132418 + 10 NA exon (FBgn0050418, exon 2 of 8) protein_coding-exon (FBgn0050418, exon 2 of 8) 1588 FBgn0050418 FBgn0050418 FBtr0072263 nord protein_coding Nup98-S2-pascual-garcia2017_R1_peak_13446 chrX 1396162 1396237 + 10 NA promoter-TSS (FBgn0053513) protein_coding-promoter-TSS (FBgn0053513) 5643 FBgn0053513 FBgn0053513 FBtr0301844 Nmdar2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10109 chr3R 9574692 9574760 + 10 NA intron (FBgn0085412, intron 4 of 13) protein_coding-intron (FBgn0085412, intron 4 of 12) -16771 FBgn0038179 FBgn0038179 FBtr0082825 CG9312 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2638 chr2L 17222487 17222574 + 10 NA intron (FBgn0032629, intron 2 of 6) protein_coding-intron (FBgn0032629, intron 2 of 5) -16829 FBgn0040987 FBgn0040987 FBtr0304947 CG15139 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5181 chr2R 11375157 11375284 + 10 NA exon (FBgn0034022, exon 3 of 4) protein_coding-exon (FBgn0034022, exon 3 of 4) -4882 FBgn0034021 FBgn0034021 FBtr0087359 CG8180 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6923 chr3L 2332235 2332350 + 10 NA intron (FBgn0035331, intron 2 of 4) protein_coding-intron (FBgn0035331, intron 2 of 4) 9599 FBgn0035331 FBgn0035331 FBtr0330187 DmsR-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5727 chr2R 16300868 16300941 + 10 NA Intergenic Intergenic -10936 FBgn0086604 FBgn0086604 FBtr0112774 CG12484 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6337 chr2RHet 403329 403383 + 10 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_10657 chr3R 13475150 13475221 + 10 NA intron (FBgn0038532, intron 1 of 7) protein_coding-intron (FBgn0038532, intron 1 of 6) 1784 FBgn0038532 FBgn0038532 FBtr0331346 CG14322 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3317 chr2L 20974075 20974282 + 10 NA intron (FBgn0250867, intron 5 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -5211 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9993 chr3R 8717988 8718053 + 10 NA exon (FBgn0038089, exon 1 of 3) protein_coding-exon (FBgn0038089, exon 1 of 3) 303 FBgn0038089 FBgn0038089 FBtr0082683 d-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10473 chr3R 12313184 12313238 + 10 NA exon (FBgn0038439, exon 6 of 12) protein_coding-exon (FBgn0038439, exon 6 of 12) -3086 FBgn0038438 FBgn0038438 FBtr0083307 Der-2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_223 chr2L 1364313 1364386 + 10 NA Intergenic Intergenic -2617 FBgn0053126 FBgn0053126 FBtr0329947 NLaz protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3509 chr2L 21879191 21879317 + 10 NA Intergenic Intergenic -14973 FBgn0264262 FBgn0264262 FBtr0331274 CR43762 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_7659 chr3L 11457542 11457805 + 10 NA exon (FBgn0036162, exon 2 of 3) protein_coding-exon (FBgn0036162, exon 2 of 3) 1291 FBgn0036162 FBgn0036162 FBtr0076177 CG6140 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3313 chr2L 20903246 20903344 + 10 NA exon (FBgn0032901, exon 3 of 11) protein_coding-exon (FBgn0032901, exon 3 of 11) 2161 FBgn0053317 FBgn0053317 FBtr0089856 CR33317 pseudogene Nup98-S2-pascual-garcia2017_R1_peak_3028 chr2L 19378795 19378927 + 10 NA Intergenic Intergenic -2069 FBgn0032772 FBgn0032772 FBtr0081199 CG17350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4239 chr2R 4092797 4092851 + 10 NA exon (FBgn0033275, exon 1 of 1) protein_coding-exon (FBgn0033275, exon 1 of 1) 387 FBgn0033275 FBgn0033275 FBtr0088804 CG14756 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2899 chr2L 18486049 18486162 + 10 NA exon (FBgn0032682, exon 1 of 3) protein_coding-exon (FBgn0032682, exon 1 of 3) 688 FBgn0032682 FBgn0032682 FBtr0300674 CG10176 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2498 chr2L 16630747 16630862 + 10 NA intron (FBgn0259735, intron 3 of 5) protein_coding-intron (FBgn0259735, intron 2 of 4) 23381 FBgn0032590 FBgn0032590 FBtr0080871 CG4631 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5411 chr2R 13640472 13640642 + 10 NA TTS (FBgn0034276) protein_coding-TTS (FBgn0034276) 2754 FBgn0034275 FBgn0034275 FBtr0089546 CG5002 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6905 chr3L 2221458 2221674 + 10 NA Intergenic Intergenic -8080 FBgn0035317 FBgn0035317 FBtr0332661 osm-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4457 chr2R 5628440 5628494 + 10 NA intron (FBgn0259678, intron 1 of 8) protein_coding-intron (FBgn0259678, intron 1 of 7) 7156 FBgn0259678 FBgn0259678 FBtr0299929 sqa protein_coding Nup98-S2-pascual-garcia2017_R1_peak_63 chr2L 739825 739949 + 10 NA exon (FBgn0026438, exon 5 of 8) protein_coding-exon (FBgn0026438, exon 5 of 8) 4508 FBgn0026438 FBgn0026438 FBtr0301316 Eaat2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7638 chr3L 11094588 11094678 + 10 NA TTS (FBgn0261112) protein_coding-TTS (FBgn0261112) 165 FBgn0036128 FBgn0036128 FBtr0113161 Elo68beta protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5393 chr2R 13395677 13395798 + 10 NA TTS (FBgn0262720) protein_coding-TTS (FBgn0262720) -1712 FBgn0085222 FBgn0085222 FBtr0112386 CG34193 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6909 chr3L 2238157 2238338 + 10 NA intron (FBgn0040507, intron 1 of 11) protein_coding-intron (FBgn0040507, intron 1 of 11) 639 FBgn0040507 FBgn0040507 FBtr0332662 ACXD protein_coding Nup98-S2-pascual-garcia2017_R1_peak_851 chr2L 6120153 6120294 + 10 NA promoter-TSS (FBgn0051641) protein_coding-promoter-TSS (FBgn0051641) 1711 FBgn0051642 FBgn0051642 FBtr0079199 CG31642 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_520 chr2L 3573317 3573411 + 10 NA Intergenic Intergenic -1986 FBgn0264370 FBgn0264370 FBtr0332221 CR43822 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_13702 chrX 13085551 13085700 + 10 NA exon (FBgn0030459, exon 1 of 3) protein_coding-exon (FBgn0030459, exon 1 of 3) 290 FBgn0030459 FBgn0030459 FBtr0073738 CG12723 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8651 chr3L 21622504 21622701 + 10 NA TTS (FBgn0037109) protein_coding-TTS (FBgn0037109) 3607 FBgn0037108 FBgn0037108 FBtr0078422 CG11306 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_265 chr2L 1458340 1458598 + 10 NA Intergenic Intergenic 15743 FBgn0263321 FBgn0263321 FBtr0308745 CG43402 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3421 chr2L 21645841 21645938 + 10 NA intron (FBgn0023416, intron 18 of 18) protein_coding-intron (FBgn0023416, intron 18 of 18) -11667 FBgn0262620 FBgn0262620 FBtr0305481 CG43144 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9773 chr3R 6883014 6883121 + 10 NA Intergenic Intergenic -31075 FBgn0263403 FBgn0263403 FBtr0309182 CG43449 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3026 chr2L 19375826 19376037 + 10 NA Intergenic Intergenic -4999 FBgn0032772 FBgn0032772 FBtr0081199 CG17350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1772 chr2L 13159540 13159685 + 10 NA promoter-TSS (FBgn0032473) protein_coding-promoter-TSS (FBgn0032473) 802 FBgn0028410 FBgn0028410 FBtr0080432 Pk34A protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9796 chr3R 7107929 7107983 + 10 NA intron (FBgn0051386, intron 3 of 4) ncRNA-intron (FBgn0051386, intron 3 of 4) 23374 FBgn0051386 FBgn0051386 FBtr0308921 CR31386 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4346 chr2R 4824741 4824861 + 10 NA exon (FBgn0033354, exon 9 of 13) protein_coding-exon (FBgn0033354, exon 9 of 13) 2498 FBgn0033354 FBgn0033354 FBtr0088675 FANCI protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10712 chr3R 13846083 13846185 + 10 NA exon (FBgn0000477, exon 2 of 2) protein_coding-exon (FBgn0000477, exon 2 of 2) 1037 FBgn0000477 FBgn0000477 FBtr0083538 DNaseII protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12270 chr3R 24991941 24992176 + 10 NA exon (FBgn0039645, exon 2 of 6) protein_coding-exon (FBgn0039645, exon 2 of 6) 543 FBgn0039645 FBgn0039645 FBtr0273260 CG11898 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3720 chr2L 22406657 22406759 + 10 NA Intergenic Intergenic 21617 FBgn0082980 FBgn0082980 FBtr0309749 snoRNA:Psi28S-2996 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_8251 chr3L 16336972 16337077 + 10 NA exon (FBgn0036612, exon 3 of 4) protein_coding-exon (FBgn0036612, exon 3 of 4) -2399 FBgn0053257 FBgn0053257 FBtr0075378 CG33257 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8271 chr3L 16498078 16498193 + 10 NA intron (FBgn0263131, intron 26 of 28) protein_coding-intron (FBgn0263131, intron 26 of 30) 7384 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12050 chr3R 24057441 24057639 + 10 NA intron (FBgn0085383, intron 4 of 8) protein_coding-intron (FBgn0085383, intron 4 of 8) 31804 FBgn0262588 FBgn0262588 FBtr0305117 CG43125 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7386 chr3L 8310591 8310645 + 10 NA Intergenic Intergenic 1448 FBgn0262361 FBgn0262361 FBtr0304642 CG43059 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11611 chr3R 22187125 22187202 + 10 NA exon (FBgn0053970, exon 9 of 9) protein_coding-exon (FBgn0053970, exon 9 of 9) 5953 FBgn0053970 FBgn0053970 FBtr0100013 CG33970 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12555 chr3R 26665621 26665708 + 10 NA exon (FBgn0039804, exon 3 of 4) protein_coding-exon (FBgn0039804, exon 3 of 4) 12092 FBgn0039804 FBgn0039804 FBtr0085708 CG15544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12899 chr3RHet 2289559 2289718 + 10 NA NA NA NA NA Nup98-S2-pascual-garcia2017_R1_peak_12552 chr3R 26661483 26661555 + 10 NA intron (FBgn0039804, intron 2 of 3) protein_coding-intron (FBgn0039804, intron 2 of 3) 7947 FBgn0039804 FBgn0039804 FBtr0085708 CG15544 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3323 chr2L 20996206 20996328 + 10 NA intron (FBgn0250867, intron 4 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -27300 FBgn0250867 FBgn0250867 FBtr0331200 CG42238 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1501 chr2L 11161398 11161452 + 10 NA intron (FBgn0259822, intron 7 of 8) protein_coding-intron (FBgn0259822, intron 8 of 9) -5709 FBgn0032350 FBgn0032350 FBtr0080222 CG6287 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6768 chr3L 898150 898298 + 10 NA TTS (FBgn0054056) protein_coding-TTS (FBgn0054056) 844 FBgn0054057 FBgn0054057 FBtr0100835 CG34057 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12468 chr3R 25733700 25733841 + 10 NA promoter-TSS (FBgn0051036) protein_coding-promoter-TSS (FBgn0051036) -59 FBgn0051036 FBgn0051036 FBtr0331354 CG31036 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7480 chr3L 9059718 9059885 + 10 NA promoter-TSS (FBgn0000116) protein_coding-promoter-TSS (FBgn0000116) 6030 FBgn0035959 FBgn0035959 FBtr0331549 CG4911 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3369 chr2L 21281306 21281470 + 10 NA intron (FBgn0032938, intron 9 of 9) protein_coding-intron (FBgn0032938, intron 10 of 10) 2885 FBgn0041336 FBgn0041336 FBtr0330681 Cyp6t2Psi pseudogene Nup98-S2-pascual-garcia2017_R1_peak_1599 chr2L 11959243 11959321 + 10 NA exon (FBgn0263019, exon 2 of 2) ncRNA-exon (FBgn0263019, exon 2 of 2) -5793 FBgn0263107 FBgn0263107 FBtr0304301 bft pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_1113 chr2L 8592094 8592246 + 10 NA intron (FBgn0264437, intron 1 of 1) protein_coding-intron (FBgn0011259, intron 3 of 21) 2319 FBgn0264437 FBgn0264437 FBtr0332517 CR43855 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_4027 chr2R 1931518 1931633 + 10 NA intron (FBgn0033055, intron 3 of 4) protein_coding-intron (FBgn0033055, intron 3 of 4) 1415 FBgn0033055 FBgn0033055 FBtr0085974 tbce protein_coding Nup98-S2-pascual-garcia2017_R1_peak_418 chr2L 2647044 2647122 + 10 NA promoter-TSS (FBgn0264433) protein_coding-promoter-TSS (FBgn0264433) 637 FBgn0031441 FBgn0031441 FBtr0077743 CG9962 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3024 chr2L 19368260 19368440 + 10 NA Intergenic Intergenic -2128 FBgn0032771 FBgn0032771 FBtr0081198 CG17349 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9732 chr3R 6540673 6540756 + 10 NA exon (FBgn0037827, exon 1 of 1) protein_coding-exon (FBgn0037827, exon 1 of 1) 194 FBgn0037827 FBgn0037827 FBtr0082269 CG4073 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4307 chr2R 4635753 4635807 + 10 NA promoter-TSS (FBgn0027585) protein_coding-promoter-TSS (FBgn0027585) 10905 FBgn0261267 FBgn0261267 FBtr0302222 CG42615 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_880 chr2L 6384948 6385134 + 10 NA exon (FBgn0259716, exon 1 of 1) protein_coding-exon (FBgn0259716, exon 1 of 1) 471 FBgn0259716 FBgn0259716 FBtr0299969 CG42370 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_416 chr2L 2641383 2641452 + 10 NA Intergenic Intergenic -4613 FBgn0264434 FBgn0264434 FBtr0332511 CR43852 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_5040 chr2R 10215710 10215882 + 10 NA exon (FBgn0085408, exon 5 of 10) protein_coding-exon (FBgn0085408, exon 5 of 10) -4104 FBgn0085408 FBgn0085408 FBtr0112616 Shroom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4039 chr2R 2056557 2056652 + 10 NA promoter-TSS (FBgn0011956) tRNA-promoter-TSS (FBgn0011956) -508 FBgn0011956 FBgn0011956 FBtr0085985 tRNA:R2:42Ab tRNA Nup98-S2-pascual-garcia2017_R1_peak_7022 chr3L 4020500 4020626 + 10 NA promoter-TSS (FBgn0035483) protein_coding-promoter-TSS (FBgn0035483) -894 FBgn0035483 FBgn0035483 FBtr0073193 Mul1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6914 chr3L 2277102 2277222 + 10 NA exon (FBgn0035328, exon 1 of 2) protein_coding-exon (FBgn0035328, exon 1 of 2) 612 FBgn0035328 FBgn0035328 FBtr0072883 yellow-g2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11270 chr3R 17705676 17705730 + 10 NA promoter-TSS (FBgn0051465) protein_coding-promoter-TSS (FBgn0051465) -829 FBgn0051465 FBgn0051465 FBtr0084147 CG31465 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7318 chr3L 7538625 7538814 + 10 NA Intergenic Intergenic -3162 FBgn0052376 FBgn0052376 FBtr0076827 CG32376 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_598 chr2L 4171915 4172072 + 10 NA Intergenic Intergenic -5859 FBgn0026394 FBgn0026394 FBtr0289965 Or24a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_7369 chr3L 8146828 8146946 + 10 NA TTS (FBgn0259916) protein_coding-TTS (FBgn0259916) -1974 FBgn0035844 FBgn0035844 FBtr0332761 CG13676 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8974 chr3R 604449 604594 + 10 NA exon (FBgn0037275, exon 2 of 3) protein_coding-exon (FBgn0037275, exon 2 of 3) 1532 FBgn0037275 FBgn0037275 FBtr0078881 CG14655 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10008 chr3R 8773397 8773601 + 10 NA Intergenic Intergenic -13975 FBgn0087021 FBgn0087021 FBtr0082690 Spc25 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_11736 chr3R 22719310 22719415 + 10 NA intron (FBgn0004359, intron 2 of 2) protein_coding-intron (FBgn0004359, intron 2 of 2) 11906 FBgn0004359 FBgn0004359 FBtr0085065 T48 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_576 chr2L 4004983 4005129 + 10 NA promoter-TSS (FBgn0031579) protein_coding-promoter-TSS (FBgn0031579) 72 FBgn0031579 FBgn0031579 FBtr0077505 CG15422 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10221 chr3R 10498610 10498711 + 10 NA intron (FBgn0051314, intron 1 of 6) protein_coding-intron (FBgn0051314, intron 1 of 7) 9495 FBgn0038252 FBgn0038252 FBtr0082969 CG3509 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10876 chr3R 14967649 14967753 + 10 NA exon (FBgn0261285, exon 4 of 5) protein_coding-exon (FBgn0261285, exon 4 of 5) 5928 FBgn0261285 FBgn0261285 FBtr0330044 Ppcs protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8270 chr3L 16495833 16495940 + 10 NA exon (FBgn0263131, exon 29 of 29) protein_coding-exon (FBgn0263131, exon 29 of 29) 5135 FBgn0003515 FBgn0003515 FBtr0075391 st protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1964 chr2L 14400162 14400404 + 10 NA intron (FBgn0004858, intron 1 of 2) protein_coding-intron (FBgn0004858, intron 1 of 2) 9264 FBgn0004858 FBgn0004858 FBtr0080637 elB protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8267 chr3L 16484194 16484293 + 10 NA TTS (FBgn0260388) protein_coding-TTS (FBgn0260388) 4125 FBgn0260388 FBgn0260388 FBtr0300657 CG42514 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10996 chr3R 15719233 15719393 + 10 NA exon (FBgn0038744, exon 2 of 9) protein_coding-exon (FBgn0038744, exon 2 of 9) 2743 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6769 chr3L 909403 909552 + 10 NA exon (FBgn0028999, exon 1 of 1) protein_coding-exon (FBgn0028999, exon 1 of 1) 365 FBgn0028999 FBgn0028999 FBtr0072592 nerfin-1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5717 chr2R 16190720 16190841 + 10 NA Intergenic Intergenic 5364 FBgn0034500 FBgn0034500 FBtr0086300 CG11200 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_631 chr2L 4402587 4402839 + 10 NA promoter-TSS (FBgn0031601) protein_coding-promoter-TSS (FBgn0031601) -538 FBgn0031601 FBgn0031601 FBtr0077435 Dim1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4656 chr2R 7261614 7261683 + 10 NA exon (FBgn0033628, exon 1 of 3) protein_coding-exon (FBgn0033628, exon 1 of 3) -1040 FBgn0033628 FBgn0033628 FBtr0304902 CG13203 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4300 chr2R 4603789 4603907 + 10 NA promoter-TSS (FBgn0043575) protein_coding-promoter-TSS (FBgn0043575) -624 FBgn0043575 FBgn0043575 FBtr0088709 PGRP-SC2 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2312 chr2L 15617371 15617528 + 10 NA exon (FBgn0028947, exon 2 of 2) protein_coding-exon (FBgn0028947, exon 2 of 2) 447 FBgn0028947 FBgn0028947 FBtr0080753 CG11865 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1768 chr2L 13108970 13109024 + 10 NA exon (FBgn0032470, exon 5 of 5) protein_coding-exon (FBgn0032470, exon 5 of 5) 2126 FBgn0032470 FBgn0032470 FBtr0301366 CG5142 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3215 chr2L 20477293 20477448 + 10 NA TTS (FBgn0262879) protein_coding-TTS (FBgn0262879) 179 FBgn0262879 FBgn0262879 FBtr0306286 CG43234 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6818 chr3L 1284806 1285065 + 10 NA exon (FBgn0052333, exon 3 of 9) protein_coding-exon (FBgn0052333, exon 3 of 9) 8979 FBgn0052333 FBgn0052333 FBtr0100256 CG32333 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_1091 chr2L 8551320 8551458 + 10 NA intron (FBgn0011259, intron 2 of 20) protein_coding-intron (FBgn0011259, intron 2 of 21) 8059 FBgn0011259 FBgn0011259 FBtr0329930 Sema-1a protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5935 chr2R 18035398 18035585 + 10 NA intron (FBgn0000008, intron 2 of 9) protein_coding-intron (FBgn0000008, intron 2 of 9) 8051 FBgn0029084 FBgn0029084 FBtr0071766 gom protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12286 chr3R 25070849 25070931 + 10 NA promoter-TSS (FBgn0051445) protein_coding-promoter-TSS (FBgn0051445) -341 FBgn0051445 FBgn0051445 FBtr0085401 CG31445 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10113 chr3R 9594845 9594934 + 10 NA exon (FBgn0038180, exon 4 of 7) protein_coding-exon (FBgn0038180, exon 4 of 7) 1618 FBgn0038180 FBgn0038180 FBtr0082826 Cht5 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8973 chr3R 603741 603864 + 10 NA TTS (FBgn0010750) protein_coding-TTS (FBgn0010750) 2251 FBgn0037275 FBgn0037275 FBtr0078881 CG14655 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8619 chr3L 20836195 20836309 + 10 NA exon (FBgn0037031, exon 3 of 6) protein_coding-exon (FBgn0037031, exon 3 of 6) 1165 FBgn0037031 FBgn0037031 FBtr0333371 CG11456 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_8954 chr3R 362364 362462 + 10 NA intron (FBgn0085386, intron 3 of 14) protein_coding-intron (FBgn0085386, intron 3 of 13) 3396 FBgn0051526 FBgn0051526 FBtr0303865 CG31526 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_9237 chr3R 2641525 2641660 + 10 NA Intergenic Intergenic -3281 FBgn0261503 FBgn0261503 FBtr0302395 CG42651 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12500 chr3R 25980907 25980961 + 10 NA exon (FBgn0039749, exon 3 of 6) protein_coding-exon (FBgn0039749, exon 3 of 6) 3153 FBgn0039748 FBgn0039748 FBtr0085567 CG15529 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12341 chr3R 25332584 25332695 + 10 NA Intergenic Intergenic -3120 FBgn0039668 FBgn0039668 FBtr0085431 Trc8 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_12168 chr3R 24531490 24531597 + 10 NA exon (FBgn0027655, exon 7 of 29) protein_coding-exon (FBgn0027655, exon 7 of 29) 9579 FBgn0027655 FBgn0027655 FBtr0085310 htt protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6980 chr3L 3185825 3185957 + 10 NA promoter-TSS (FBgn0052284) protein_coding-promoter-TSS (FBgn0052284) -773 FBgn0052284 FBgn0052284 FBtr0073037 CG32284 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_6002 chr2R 18655316 18655459 + 10 NA intron (FBgn0259145, intron 2 of 11) protein_coding-intron (FBgn0259145, intron 2 of 11) 4148 FBgn0034776 FBgn0034776 FBtr0071880 CG13527 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_408 chr2L 2563577 2563755 + 10 NA intron (FBgn0031432, intron 3 of 5) protein_coding-intron (FBgn0031432, intron 3 of 5) 1182 FBgn0031432 FBgn0031432 FBtr0077749 Cyp309a1 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_361 chr2L 2026877 2027030 + 10 NA exon (FBgn0031384, exon 2 of 9) protein_coding-exon (FBgn0031384, exon 2 of 9) -4739 FBgn0011860 FBgn0011860 FBtr0077821 tRNA:G3:22BCb tRNA Nup98-S2-pascual-garcia2017_R1_peak_2994 chr2L 19267959 19268155 + 10 NA Intergenic Intergenic -5164 FBgn0051797 FBgn0051797 FBtr0081227 CG31797 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_306 chr2L 1585687 1585840 + 10 NA exon (FBgn0031347, exon 2 of 2) protein_coding-exon (FBgn0031347, exon 2 of 2) 1392 FBgn0031347 FBgn0031347 FBtr0077917 CG10869 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10227 chr3R 10640223 10640355 + 10 NA exon (FBgn0053555, exon 1 of 7) protein_coding-exon (FBgn0053555, exon 1 of 7) 12794 FBgn0038262 FBgn0038262 FBtr0082993 CG14857 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_518 chr2L 3565673 3565748 + 10 NA Intergenic Intergenic -9640 FBgn0264370 FBgn0264370 FBtr0332221 CR43822 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_10187 chr3R 10216029 10216167 + 10 NA Intergenic Intergenic 6067 FBgn0262327 FBgn0262327 FBtr0304502 mir-2281 pre_miRNA Nup98-S2-pascual-garcia2017_R1_peak_2750 chr2L 17794605 17794712 + 10 NA TTS (FBgn0263338) ncRNA-TTS (FBgn0263338) 2246 FBgn0263338 FBgn0263338 FBtr0308768 CR43419 ncRNA Nup98-S2-pascual-garcia2017_R1_peak_1364 chr2L 9621572 9621694 + 10 NA exon (FBgn0032135, exon 3 of 5) protein_coding-exon (FBgn0032135, exon 3 of 5) 3652 FBgn0051882 FBgn0051882 FBtr0079853 CG31882 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_10934 chr3R 15414290 15414459 + 10 NA intron (FBgn0260003, intron 2 of 10) protein_coding-intron (FBgn0260003, intron 26 of 34) 2456 FBgn0065080 FBgn0065080 FBtr0091611 snoRNA:Me18S-A1374 snoRNA Nup98-S2-pascual-garcia2017_R1_peak_9608 chr3R 5498736 5498811 + 10 NA exon (FBgn0037726, exon 4 of 35) protein_coding-exon (FBgn0037726, exon 4 of 35) 1592 FBgn0037726 FBgn0037726 FBtr0309028 CG9492 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_5781 chr2R 16831388 16831544 + 10 NA promoter-TSS (FBgn0000044) protein_coding-promoter-TSS (FBgn0000044) -67 FBgn0000044 FBgn0000044 FBtr0300946 Act57B protein_coding Nup98-S2-pascual-garcia2017_R1_peak_4824 chr2R 8382373 8382447 + 10 NA promoter-TSS (FBgn0050044) protein_coding-promoter-TSS (FBgn0050044) -620 FBgn0050044 FBgn0050044 FBtr0113358 s-cup protein_coding Nup98-S2-pascual-garcia2017_R1_peak_3027 chr2L 19376921 19377104 + 10 NA Intergenic Intergenic -3918 FBgn0032772 FBgn0032772 FBtr0081199 CG17350 protein_coding Nup98-S2-pascual-garcia2017_R1_peak_2592 chr2L 17063968 17064108 + 10 NA Intergenic Intergenic -15757 FBgn0032625 FBgn0032625 FBtr0080954 CG15136 protein_coding