PeakID (cmd=annotatePeaks.pl CG8478-S2-modencode_R1_peaks.broadPeak dm3.fa -gid -gtf Drosophila_melanogaster.BDGP5.78.chr.gtf -cpu 6) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type CG8478-S2-modencode_R1_peak_575 chr3L 377741 378561 + 126 NA promoter-TSS (FBgn0262139) protein_coding-promoter-TSS (FBgn0262139) -835 FBgn0262139 FBgn0262139 FBtr0333902 trh protein_coding CG8478-S2-modencode_R1_peak_1002 chr3R 12589426 12590204 + 107 NA promoter-TSS (FBgn0084245) ncRNA-promoter-TSS (FBgn0084245) -374 FBgn0084245 FBgn0084245 FBtr0113490 tre-3 ncRNA CG8478-S2-modencode_R1_peak_1249 chrUextra 19603922 19604022 + 101 NA NA NA NA NA CG8478-S2-modencode_R1_peak_510 chr2R 15993894 15994368 + 98 NA Intergenic Intergenic -4885 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding CG8478-S2-modencode_R1_peak_125 chr2L 12586824 12587337 + 95 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -31268 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding CG8478-S2-modencode_R1_peak_1531 chrX 17662176 17662630 + 95 NA Intergenic Intergenic -1013 FBgn0024184 FBgn0024184 FBtr0074460 unc-4 protein_coding CG8478-S2-modencode_R1_peak_1229 chrM 17077 17452 + 94 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1328 chrX 4319046 4319453 + 86 NA intron (FBgn0000179, intron 1 of 7) protein_coding-intron (FBgn0000179, intron 1 of 7) 12360 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding CG8478-S2-modencode_R1_peak_1162 chr3R 25381850 25382139 + 85 NA promoter-TSS (FBgn0000492) protein_coding-promoter-TSS (FBgn0000492) -115 FBgn0000492 FBgn0000492 FBtr0085441 Dr protein_coding CG8478-S2-modencode_R1_peak_948 chr3R 8889456 8890348 + 83 NA intron (FBgn0004666, intron 1 of 7) protein_coding-intron (FBgn0004666, intron 1 of 7) 6421 FBgn0004666 FBgn0004666 FBtr0082710 sim protein_coding CG8478-S2-modencode_R1_peak_58 chr2L 5460954 5461819 + 83 NA promoter-TSS (FBgn0261963) protein_coding-promoter-TSS (FBgn0261963) -255 FBgn0261963 FBgn0261963 FBtr0310358 mid protein_coding CG8478-S2-modencode_R1_peak_1225 chrM 10343 10441 + 82 NA NA NA NA NA CG8478-S2-modencode_R1_peak_175 chr2L 20770405 20770757 + 81 NA promoter-TSS (FBgn0000251) protein_coding-promoter-TSS (FBgn0000251) -313 FBgn0000251 FBgn0000251 FBtr0081413 cad protein_coding CG8478-S2-modencode_R1_peak_390 chr2R 9844327 9845857 + 80 NA TTS (FBgn0033886) protein_coding-TTS (FBgn0033886) 502 FBgn0262739 FBgn0262739 FBtr0087613 AGO1 protein_coding CG8478-S2-modencode_R1_peak_1386 chrX 8544637 8545546 + 79 NA promoter-TSS (FBgn0004102) protein_coding-promoter-TSS (FBgn0004102) -377 FBgn0004102 FBgn0004102 FBtr0331305 oc protein_coding CG8478-S2-modencode_R1_peak_1001 chr3R 12528466 12529177 + 79 NA intron (FBgn0003944, intron 1 of 1) protein_coding-intron (FBgn0003944, intron 3 of 3) 31527 FBgn0003944 FBgn0003944 FBtr0083350 Ubx protein_coding CG8478-S2-modencode_R1_peak_1326 chrX 4305357 4305918 + 78 NA intron (FBgn0052773, intron 3 of 4) protein_coding-intron (FBgn0052773, intron 3 of 4) -1252 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding CG8478-S2-modencode_R1_peak_1422 chrX 9586604 9588323 + 74 NA promoter-TSS (FBgn0000233) protein_coding-promoter-TSS (FBgn0000233) -758 FBgn0000233 FBgn0000233 FBtr0071379 btd protein_coding CG8478-S2-modencode_R1_peak_56 chr2L 5403540 5404008 + 73 NA promoter-TSS (FBgn0016660) protein_coding-promoter-TSS (FBgn0016660) -568 FBgn0016660 FBgn0016660 FBtr0079076 H15 protein_coding CG8478-S2-modencode_R1_peak_479 chr2R 14540117 14540841 + 72 NA promoter-TSS (FBgn0034371) protein_coding-promoter-TSS (FBgn0034371) -200 FBgn0034371 FBgn0034371 FBtr0086658 SP2637 protein_coding CG8478-S2-modencode_R1_peak_773 chr3L 17995789 17996987 + 72 NA promoter-TSS (FBgn0086081) snoRNA-promoter-TSS (FBgn0086081) -210 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_576 chr3L 432588 432893 + 72 NA TTS (FBgn0035139) protein_coding-TTS (FBgn0035139) 1166 FBgn0035139 FBgn0035139 FBtr0072566 CG13891 protein_coding CG8478-S2-modencode_R1_peak_19 chr2L 1644202 1644820 + 72 NA Intergenic Intergenic -6747 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_953 chr3R 9700691 9701083 + 70 NA promoter-TSS (FBgn0008646) protein_coding-promoter-TSS (FBgn0008646) -249 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding CG8478-S2-modencode_R1_peak_105 chr2L 11445706 11446576 + 69 NA promoter-TSS (FBgn0261648) protein_coding-promoter-TSS (FBgn0261648) -538 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding CG8478-S2-modencode_R1_peak_1515 chrX 16110660 16111867 + 69 NA promoter-TSS (FBgn0000459) protein_coding-promoter-TSS (FBgn0000459) -484 FBgn0000459 FBgn0000459 FBtr0100384 disco protein_coding CG8478-S2-modencode_R1_peak_1320 chrX 3755096 3755578 + 68 NA exon (FBgn0019661, exon 1 of 1) ncRNA-exon (FBgn0019661, exon 1 of 1) 1121 FBgn0019661 FBgn0019661 FBtr0070634 roX1 ncRNA CG8478-S2-modencode_R1_peak_1227 chrM 13515 13626 + 67 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1192 chr3R 26737942 26738541 + 67 NA promoter-TSS (FBgn0020912) protein_coding-promoter-TSS (FBgn0020912) -369 FBgn0020912 FBgn0020912 FBtr0089390 Ptx1 protein_coding CG8478-S2-modencode_R1_peak_537 chr2R 17771573 17772221 + 66 NA intron (FBgn0085397, intron 1 of 6) protein_coding-intron (FBgn0085397, intron 1 of 4) 1080 FBgn0085397 FBgn0085397 FBtr0330338 Fili protein_coding CG8478-S2-modencode_R1_peak_834 chr3R 677796 678819 + 66 NA promoter-TSS (FBgn0003002) protein_coding-promoter-TSS (FBgn0003002) -228 FBgn0003002 FBgn0003002 FBtr0078836 opa protein_coding CG8478-S2-modencode_R1_peak_833 chr3R 660897 661512 + 65 NA Intergenic Intergenic -4185 FBgn0037284 FBgn0037284 FBtr0078873 CG14659 protein_coding CG8478-S2-modencode_R1_peak_345 chr2R 7415418 7416168 + 65 NA promoter-TSS (FBgn0000577) protein_coding-promoter-TSS (FBgn0000577) -405 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding CG8478-S2-modencode_R1_peak_929 chr3R 6439972 6440440 + 65 NA promoter-TSS (FBgn0001235) protein_coding-promoter-TSS (FBgn0001235) -8814 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding CG8478-S2-modencode_R1_peak_785 chr3L 18752249 18752711 + 64 NA intron (FBgn0001078, intron 1 of 7) protein_coding-intron (FBgn0001078, intron 3 of 9) 6364 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding CG8478-S2-modencode_R1_peak_731 chr3L 14355921 14357149 + 63 NA intron (FBgn0001085, intron 4 of 4) protein_coding-intron (FBgn0001085, intron 4 of 4) 6272 FBgn0036421 FBgn0036421 FBtr0113170 CG13481 protein_coding CG8478-S2-modencode_R1_peak_705 chr3L 10849681 10850875 + 61 NA promoter-TSS (FBgn0026160) protein_coding-promoter-TSS (FBgn0026160) -1226 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_1336 chrX 5454432 5455047 + 61 NA promoter-TSS (FBgn0263512) protein_coding-promoter-TSS (FBgn0263512) -523 FBgn0263512 FBgn0263512 FBtr0100024 Vsx2 protein_coding CG8478-S2-modencode_R1_peak_404 chr2R 10345534 10345873 + 61 NA promoter-TSS (FBgn0261613) protein_coding-promoter-TSS (FBgn0261613) 22299 FBgn0261613 FBgn0261613 FBtr0302926 Oaz protein_coding CG8478-S2-modencode_R1_peak_1513 chrX 16041636 16042492 + 60 NA exon (FBgn0042650, exon 1 of 4) protein_coding-exon (FBgn0042650, exon 1 of 4) -23699 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding CG8478-S2-modencode_R1_peak_1329 chrX 4320734 4321173 + 60 NA promoter-TSS (FBgn0000179) protein_coding-promoter-TSS (FBgn0000179) 14064 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding CG8478-S2-modencode_R1_peak_1241 chrUextra 7039501 7039662 + 60 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1390 chrX 8700562 8701156 + 59 NA Intergenic Intergenic -21473 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding CG8478-S2-modencode_R1_peak_429 chr2R 12715769 12716684 + 59 NA promoter-TSS (FBgn0263659) ncRNA-promoter-TSS (FBgn0263659) 1849 FBgn0085489 FBgn0085489 FBtr0112766 CG34460 protein_coding CG8478-S2-modencode_R1_peak_1337 chrX 5487878 5488225 + 58 NA promoter-TSS (FBgn0263511) protein_coding-promoter-TSS (FBgn0263511) -255 FBgn0263511 FBgn0263511 FBtr0070781 Vsx1 protein_coding CG8478-S2-modencode_R1_peak_1481 chrX 12644520 12647333 + 58 NA Intergenic Intergenic 5576 FBgn0030418 FBgn0030418 FBtr0333722 CG4004 protein_coding CG8478-S2-modencode_R1_peak_1472 chrX 12557508 12560583 + 58 NA intron (FBgn0011837, intron 2 of 3) protein_coding-intron (FBgn0011837, intron 2 of 3) 5550 FBgn0053963 FBgn0053963 FBtr0100004 CR33963 ncRNA CG8478-S2-modencode_R1_peak_282 chr2R 6310726 6311292 + 57 NA promoter-TSS (FBgn0033520) protein_coding-promoter-TSS (FBgn0033520) -932 FBgn0033520 FBgn0033520 FBtr0088261 Prx2540-1 protein_coding CG8478-S2-modencode_R1_peak_1477 chrX 12628352 12630733 + 57 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 6935 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding CG8478-S2-modencode_R1_peak_1551 chrX 19760266 19761198 + 56 NA intron (FBgn0052529, intron 1 of 8) protein_coding-intron (FBgn0052529, intron 1 of 8) 553 FBgn0052529 FBgn0052529 FBtr0306523 Hers protein_coding CG8478-S2-modencode_R1_peak_1510 chrX 15754369 15754882 + 56 NA intron (FBgn0001105, intron 1 of 2) protein_coding-intron (FBgn0001105, intron 1 of 3) 477 FBgn0001105 FBgn0001105 FBtr0074107 Gbeta13F protein_coding CG8478-S2-modencode_R1_peak_719 chr3L 12602313 12602946 + 56 NA promoter-TSS (FBgn0015919) protein_coding-promoter-TSS (FBgn0015919) -102 FBgn0015919 FBgn0015919 FBtr0075909 caup protein_coding CG8478-S2-modencode_R1_peak_972 chr3R 11112028 11112805 + 56 NA intron (FBgn0003721, intron 4 of 11) protein_coding-intron (FBgn0003721, intron 3 of 9) 5144 FBgn0003721 FBgn0003721 FBtr0305656 Tm1 protein_coding CG8478-S2-modencode_R1_peak_1557 chrX 20053034 20053789 + 56 NA TTS (FBgn0031091) protein_coding-TTS (FBgn0031091) 494 FBgn0031090 FBgn0031090 FBtr0333548 Rab35 protein_coding CG8478-S2-modencode_R1_peak_931 chr3R 6447939 6448232 + 56 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -16693 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding CG8478-S2-modencode_R1_peak_1089 chr3R 19200552 19200828 + 55 NA TTS (FBgn0262010) protein_coding-TTS (FBgn0262010) 1265 FBgn0262010 FBgn0262010 FBtr0303835 CG42828 protein_coding CG8478-S2-modencode_R1_peak_14 chr2L 594785 595469 + 55 NA promoter-TSS (FBgn0010323) protein_coding-promoter-TSS (FBgn0010323) -317 FBgn0010323 FBgn0010323 FBtr0078072 Gsc protein_coding CG8478-S2-modencode_R1_peak_857 chr3R 2826259 2826917 + 55 NA Intergenic Intergenic -51469 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding CG8478-S2-modencode_R1_peak_1054 chr3R 17260028 17260291 + 55 NA promoter-TSS (FBgn0008651) protein_coding-promoter-TSS (FBgn0008651) -304 FBgn0008651 FBgn0008651 FBtr0300061 lbl protein_coding CG8478-S2-modencode_R1_peak_256 chr2R 4519897 4520417 + 55 NA promoter-TSS (FBgn0033317) protein_coding-promoter-TSS (FBgn0033317) -690 FBgn0033317 FBgn0033317 FBtr0088727 CG8635 protein_coding CG8478-S2-modencode_R1_peak_1339 chrX 5640375 5641212 + 54 NA promoter-TSS (FBgn0029798) protein_coding-promoter-TSS (FBgn0029798) 494 FBgn0261383 FBgn0261383 FBtr0070842 IntS6 protein_coding CG8478-S2-modencode_R1_peak_189 chr2L 22024493 22024805 + 54 NA TTS (FBgn0028979) protein_coding-TTS (FBgn0028979) 4614 FBgn0028979 FBgn0028979 FBtr0089377 tio protein_coding CG8478-S2-modencode_R1_peak_343 chr2R 7356835 7357451 + 53 NA Intergenic Intergenic -6067 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding CG8478-S2-modencode_R1_peak_1 chr2L 5119 6046 + 53 NA Intergenic Intergenic -1947 FBgn0031208 FBgn0031208 FBtr0330654 CG11023 protein_coding CG8478-S2-modencode_R1_peak_30 chr2L 1970408 1970919 + 53 NA promoter-TSS (FBgn0031375) protein_coding-promoter-TSS (FBgn0031375) -3463 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding CG8478-S2-modencode_R1_peak_511 chr2R 15998456 15999002 + 53 NA promoter-TSS (FBgn0004364) protein_coding-promoter-TSS (FBgn0004364) -287 FBgn0004364 FBgn0004364 FBtr0086309 18w protein_coding CG8478-S2-modencode_R1_peak_1003 chr3R 12655806 12656042 + 53 NA promoter-TSS (FBgn0000014) protein_coding-promoter-TSS (FBgn0000014) -157 FBgn0000014 FBgn0000014 FBtr0083388 abd-A protein_coding CG8478-S2-modencode_R1_peak_1211 chr4 1010023 1010510 + 53 NA promoter-TSS (FBgn0019650) protein_coding-promoter-TSS (FBgn0019650) -85 FBgn0019650 FBgn0019650 FBtr0089185 toy protein_coding CG8478-S2-modencode_R1_peak_1245 chrUextra 17026125 17026214 + 53 NA NA NA NA NA CG8478-S2-modencode_R1_peak_2 chr2L 129009 129453 + 52 NA promoter-TSS (FBgn0025683) protein_coding-promoter-TSS (FBgn0025683) 10 FBgn0025683 FBgn0025683 FBtr0100379 CG3164 protein_coding CG8478-S2-modencode_R1_peak_31 chr2L 1972510 1973073 + 52 NA Intergenic Intergenic -1335 FBgn0031376 FBgn0031376 FBtr0077813 Der-1 protein_coding CG8478-S2-modencode_R1_peak_149 chr2L 16485817 16486998 + 52 NA promoter-TSS (FBgn0005677) protein_coding-promoter-TSS (FBgn0005677) -423 FBgn0005677 FBgn0005677 FBtr0080879 dac protein_coding CG8478-S2-modencode_R1_peak_344 chr2R 7362766 7363263 + 52 NA promoter-TSS (FBgn0001269) protein_coding-promoter-TSS (FBgn0001269) -196 FBgn0001269 FBgn0001269 FBtr0088070 inv protein_coding CG8478-S2-modencode_R1_peak_727 chr3L 14124591 14125365 + 52 NA promoter-TSS (FBgn0042630) protein_coding-promoter-TSS (FBgn0042630) -581 FBgn0042630 FBgn0042630 FBtr0330116 Sox21b protein_coding CG8478-S2-modencode_R1_peak_1188 chr3R 26625467 26626756 + 52 NA exon (FBgn0011739, exon 2 of 8) protein_coding-exon (FBgn0011739, exon 2 of 8) 6230 FBgn0011739 FBgn0011739 FBtr0085720 wts protein_coding CG8478-S2-modencode_R1_peak_518 chr2R 16885397 16887088 + 51 NA intron (FBgn0034570, intron 1 of 6) protein_coding-intron (FBgn0034570, intron 1 of 6) 2517 FBgn0034570 FBgn0034570 FBtr0303195 CG10543 protein_coding CG8478-S2-modencode_R1_peak_1444 chrX 10418025 10419109 + 51 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) -37907 FBgn0052687 FBgn0052687 FBtr0071458 CG32687 protein_coding CG8478-S2-modencode_R1_peak_1356 chrX 7098568 7099367 + 51 NA intron (FBgn0029939, intron 1 of 3) protein_coding-intron (FBgn0029939, intron 2 of 5) 8905 FBgn0029939 FBgn0029939 FBtr0301241 CG9650 protein_coding CG8478-S2-modencode_R1_peak_754 chr3L 17480200 17480564 + 51 NA intron (FBgn0036732, intron 1 of 8) protein_coding-intron (FBgn0036732, intron 1 of 8) 164 FBgn0036732 FBgn0036732 FBtr0302041 Oatp74D protein_coding CG8478-S2-modencode_R1_peak_126 chr2L 12618046 12618554 + 50 NA promoter-TSS (FBgn0085424) protein_coding-promoter-TSS (FBgn0085424) -48 FBgn0085424 FBgn0085424 FBtr0112643 nub protein_coding CG8478-S2-modencode_R1_peak_207 chr2R 1614128 1614830 + 50 NA promoter-TSS (FBgn0000099) protein_coding-promoter-TSS (FBgn0000099) -9925 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding CG8478-S2-modencode_R1_peak_540 chr2R 18129479 18130693 + 50 NA Intergenic Intergenic -14362 FBgn0034716 FBgn0034716 FBtr0301476 Oatp58Dc protein_coding CG8478-S2-modencode_R1_peak_91 chr2L 8825248 8825754 + 50 NA promoter-TSS (FBgn0029123) protein_coding-promoter-TSS (FBgn0029123) -124 FBgn0029123 FBgn0029123 FBtr0330210 SoxN protein_coding CG8478-S2-modencode_R1_peak_1439 chrX 10366513 10368702 + 50 NA promoter-TSS (FBgn0030206) protein_coding-promoter-TSS (FBgn0030206) 13 FBgn0261710 FBgn0261710 FBtr0307488 nocte protein_coding CG8478-S2-modencode_R1_peak_1166 chr3R 25598314 25600266 + 50 NA exon (FBgn0001297, exon 1 of 3) protein_coding-exon (FBgn0001297, exon 1 of 3) 7163 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding CG8478-S2-modencode_R1_peak_23 chr2L 1666651 1667142 + 50 NA promoter-TSS (FBgn0086758) protein_coding-promoter-TSS (FBgn0086758) 15638 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_1385 chrX 8518847 8519153 + 50 NA Intergenic Intergenic -18665 FBgn0030054 FBgn0030054 FBtr0071228 Caf1-180 protein_coding CG8478-S2-modencode_R1_peak_1055 chr3R 17272073 17272500 + 49 NA promoter-TSS (FBgn0011278) protein_coding-promoter-TSS (FBgn0011278) -244 FBgn0011278 FBgn0011278 FBtr0084091 lbe protein_coding CG8478-S2-modencode_R1_peak_1232 chrU 5289310 5289398 + 49 NA NA NA NA NA CG8478-S2-modencode_R1_peak_916 chr3R 5912891 5913693 + 49 NA Intergenic Intergenic -3611 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_370 chr2R 8791671 8792132 + 49 NA Intergenic Intergenic -11601 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding CG8478-S2-modencode_R1_peak_516 chr2R 16790951 16791462 + 49 NA promoter-TSS (FBgn0015524) protein_coding-promoter-TSS (FBgn0015524) -306 FBgn0015524 FBgn0015524 FBtr0110772 otp protein_coding CG8478-S2-modencode_R1_peak_281 chr2R 6308590 6309367 + 49 NA promoter-TSS (FBgn0053474) protein_coding-promoter-TSS (FBgn0053474) 218 FBgn0033519 FBgn0033519 FBtr0088316 CG11825 protein_coding CG8478-S2-modencode_R1_peak_599 chr3L 1177890 1178594 + 49 NA promoter-TSS (FBgn0025525) protein_coding-promoter-TSS (FBgn0025525) -966 FBgn0025525 FBgn0025525 FBtr0333271 bab2 protein_coding CG8478-S2-modencode_R1_peak_856 chr3R 2756090 2756566 + 48 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) 2234 FBgn0260642 FBgn0260642 FBtr0081646 Antp protein_coding CG8478-S2-modencode_R1_peak_1257 chrX 1293156 1294190 + 48 NA Intergenic Intergenic 6586 FBgn0024985 FBgn0024985 FBtr0332292 CG11448 protein_coding CG8478-S2-modencode_R1_peak_1420 chrX 9579777 9581329 + 48 NA promoter-TSS (FBgn0261617) protein_coding-promoter-TSS (FBgn0261617) 138 FBgn0261617 FBgn0261617 FBtr0302722 nej protein_coding CG8478-S2-modencode_R1_peak_1004 chr3R 12673006 12673196 + 48 NA intron (FBgn0263610, intron 5 of 7) ncRNA-intron (FBgn0263610, intron 4 of 6) -2625 FBgn0020546 FBgn0020546 FBtr0083363 iab-4 ncRNA CG8478-S2-modencode_R1_peak_373 chr2R 8843342 8843706 + 48 NA TTS (FBgn0033787) protein_coding-TTS (FBgn0033787) 2463 FBgn0033787 FBgn0033787 FBtr0087792 CG13321 protein_coding CG8478-S2-modencode_R1_peak_1361 chrX 7520986 7521443 + 47 NA intron (FBgn0004198, intron 1 of 6) protein_coding-intron (FBgn0004198, intron 1 of 6) 18033 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding CG8478-S2-modencode_R1_peak_841 chr3R 2159208 2159497 + 47 NA Intergenic Intergenic -1734 FBgn0037429 FBgn0037429 FBtr0301493 Osi19 protein_coding CG8478-S2-modencode_R1_peak_804 chr3L 19784298 19785418 + 47 NA promoter-TSS (FBgn0261360) protein_coding-promoter-TSS (FBgn0261360) 1811 FBgn0261360 FBgn0261360 FBtr0302277 CG42637 protein_coding CG8478-S2-modencode_R1_peak_718 chr3L 12461024 12461498 + 47 NA promoter-TSS (FBgn0000625) protein_coding-promoter-TSS (FBgn0000625) -140 FBgn0000625 FBgn0000625 FBtr0100170 eyg protein_coding CG8478-S2-modencode_R1_peak_1113 chr3R 20455583 20456182 + 47 NA promoter-TSS (FBgn0039213) protein_coding-promoter-TSS (FBgn0039213) -72 FBgn0046685 FBgn0046685 FBtr0084669 Wsck protein_coding CG8478-S2-modencode_R1_peak_983 chr3R 11851350 11852025 + 47 NA promoter-TSS (FBgn0003117) protein_coding-promoter-TSS (FBgn0003117) -8425 FBgn0003117 FBgn0003117 FBtr0083221 pnr protein_coding CG8478-S2-modencode_R1_peak_1419 chrX 9578123 9579332 + 46 NA intron (FBgn0261617, intron 1 of 13) protein_coding-intron (FBgn0261617, intron 1 of 13) 1964 FBgn0261617 FBgn0261617 FBtr0302722 nej protein_coding CG8478-S2-modencode_R1_peak_1307 chrX 3643033 3643151 + 46 NA exon (FBgn0086899, exon 2 of 10) protein_coding-exon (FBgn0086899, exon 2 of 10) -23581 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_1258 chrX 1515393 1516274 + 46 NA promoter-TSS (FBgn0000210) protein_coding-promoter-TSS (FBgn0000210) -3645 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding CG8478-S2-modencode_R1_peak_867 chr3R 4007178 4007660 + 45 NA promoter-TSS (FBgn0001138) protein_coding-promoter-TSS (FBgn0001138) -255 FBgn0001138 FBgn0001138 FBtr0330188 grn protein_coding CG8478-S2-modencode_R1_peak_1141 chr3R 22087253 22087591 + 45 NA promoter-TSS (FBgn0000064) protein_coding-promoter-TSS (FBgn0000064) -109 FBgn0000064 FBgn0000064 FBtr0085000 Ald protein_coding CG8478-S2-modencode_R1_peak_656 chr3L 6735400 6735935 + 45 NA intron (FBgn0261934, intron 1 of 9) protein_coding-intron (FBgn0261934, intron 1 of 4) 597 FBgn0261934 FBgn0261934 FBtr0303748 dikar protein_coding CG8478-S2-modencode_R1_peak_250 chr2R 3906340 3906732 + 45 NA Intergenic Intergenic 3726 FBgn0263572 FBgn0263572 FBtr0309728 mir-4981 pre_miRNA CG8478-S2-modencode_R1_peak_1224 chrM 8939 9217 + 45 NA NA NA NA NA CG8478-S2-modencode_R1_peak_930 chr3R 6442357 6443230 + 45 NA intron (FBgn0001235, intron 1 of 7) protein_coding-intron (FBgn0001235, intron 1 of 7) -11401 FBgn0001235 FBgn0001235 FBtr0100455 hth protein_coding CG8478-S2-modencode_R1_peak_51 chr2L 5093092 5093450 + 44 NA promoter-TSS (FBgn0031682) protein_coding-promoter-TSS (FBgn0031682) 321 FBgn0031681 FBgn0031681 FBtr0111024 pgant5 protein_coding CG8478-S2-modencode_R1_peak_722 chr3L 12685828 12686581 + 44 NA promoter-TSS (FBgn0014343) protein_coding-promoter-TSS (FBgn0014343) -535 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding CG8478-S2-modencode_R1_peak_995 chr3R 12228966 12229791 + 44 NA promoter-TSS (FBgn0003513) protein_coding-promoter-TSS (FBgn0003513) 34 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding CG8478-S2-modencode_R1_peak_1101 chr3R 19882935 19883320 + 43 NA promoter-TSS (FBgn0040283) protein_coding-promoter-TSS (FBgn0040283) -98 FBgn0001230 FBgn0001230 FBtr0084589 Hsp68 protein_coding CG8478-S2-modencode_R1_peak_1532 chrX 17683321 17683852 + 43 NA Intergenic Intergenic -1497 FBgn0026058 FBgn0026058 FBtr0074461 OdsH protein_coding CG8478-S2-modencode_R1_peak_976 chr3R 11619214 11620558 + 43 NA TTS (FBgn0038363) protein_coding-TTS (FBgn0038363) 347 FBgn0262527 FBgn0262527 FBtr0309863 wah protein_coding CG8478-S2-modencode_R1_peak_643 chr3L 4233646 4234020 + 43 NA intron (FBgn0001257, intron 1 of 2) protein_coding-intron (FBgn0001257, intron 1 of 2) -6475 FBgn0035515 FBgn0035515 FBtr0073226 CG14997 protein_coding CG8478-S2-modencode_R1_peak_135 chr2L 14020275 14021071 + 43 NA promoter-TSS (FBgn0001967) protein_coding-promoter-TSS (FBgn0001967) -465 FBgn0001967 FBgn0001967 FBtr0290243 nimC3 protein_coding CG8478-S2-modencode_R1_peak_346 chr2R 7417049 7417296 + 43 NA Intergenic Intergenic -1784 FBgn0000577 FBgn0000577 FBtr0088096 en protein_coding CG8478-S2-modencode_R1_peak_369 chr2R 8771583 8772494 + 43 NA exon (FBgn0003975, exon 1 of 8) protein_coding-exon (FBgn0003975, exon 1 of 8) 332 FBgn0003975 FBgn0003975 FBtr0087785 vg protein_coding CG8478-S2-modencode_R1_peak_812 chr3L 21472707 21473080 + 43 NA Intergenic Intergenic -3314 FBgn0014143 FBgn0014143 FBtr0078395 croc protein_coding CG8478-S2-modencode_R1_peak_1266 chrX 2051907 2052880 + 42 NA TTS (FBgn0005670) protein_coding-TTS (FBgn0005670) -2416 FBgn0004655 FBgn0004655 FBtr0070430 wapl protein_coding CG8478-S2-modencode_R1_peak_1496 chrX 13888960 13889502 + 42 NA Intergenic Intergenic -1459 FBgn0000173 FBgn0000173 FBtr0332844 ben protein_coding CG8478-S2-modencode_R1_peak_223 chr2R 2389223 2389462 + 42 NA promoter-TSS (FBgn0086655) protein_coding-promoter-TSS (FBgn0086655) 31758 FBgn0264506 FBgn0264506 FBtr0332951 CR43905 ncRNA CG8478-S2-modencode_R1_peak_1265 chrX 2050020 2050295 + 41 NA promoter-TSS (FBgn0004655) protein_coding-promoter-TSS (FBgn0004655) -180 FBgn0004655 FBgn0004655 FBtr0070430 wapl protein_coding CG8478-S2-modencode_R1_peak_1417 chrX 9560389 9560874 + 41 NA exon (FBgn0261617, exon 14 of 14) protein_coding-exon (FBgn0261617, exon 14 of 14) -3840 FBgn0030148 FBgn0030148 FBtr0071403 CG3106 protein_coding CG8478-S2-modencode_R1_peak_1040 chr3R 16086932 16087708 + 41 NA intron (FBgn0262582, intron 2 of 18) protein_coding-intron (FBgn0262582, intron 2 of 18) -31667 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding CG8478-S2-modencode_R1_peak_579 chr3L 548357 549587 + 41 NA intron (FBgn0035142, intron 2 of 10) protein_coding-intron (FBgn0035142, intron 2 of 10) -6041 FBgn0035141 FBgn0035141 FBtr0072564 Cypl protein_coding CG8478-S2-modencode_R1_peak_300 chr2R 6456020 6456660 + 41 NA promoter-TSS (FBgn0263102) protein_coding-promoter-TSS (FBgn0263102) 10947 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_1493 chrX 13783128 13784059 + 41 NA intron (FBgn0263115, intron 3 of 7) protein_coding-intron (FBgn0263115, intron 2 of 4) -32436 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding CG8478-S2-modencode_R1_peak_1226 chrM 12049 12388 + 41 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1005 chr3R 12695123 12695359 + 40 NA intron (FBgn0263610, intron 4 of 7) ncRNA-intron (FBgn0263610, intron 3 of 6) 13204 FBgn0262462 FBgn0262462 FBtr0304522 mir-iab-4 pre_miRNA CG8478-S2-modencode_R1_peak_1024 chr3R 14069547 14070660 + 40 NA intron (FBgn0020238, intron 1 of 3) protein_coding-intron (FBgn0020238, intron 1 of 3) 1850 FBgn0020238 FBgn0020238 FBtr0083567 14-3-3epsilon protein_coding CG8478-S2-modencode_R1_peak_581 chr3L 616735 617046 + 40 NA promoter-TSS (FBgn0261636) protein_coding-promoter-TSS (FBgn0261636) -244 FBgn0261636 FBgn0261636 FBtr0303002 CG42719 protein_coding CG8478-S2-modencode_R1_peak_908 chr3R 5550781 5551132 + 40 NA TTS (FBgn0262477) protein_coding-TTS (FBgn0262477) 377 FBgn0002431 FBgn0002431 FBtr0082090 hyd protein_coding CG8478-S2-modencode_R1_peak_954 chr3R 9702923 9703288 + 40 NA Intergenic Intergenic -2467 FBgn0008646 FBgn0008646 FBtr0082880 E5 protein_coding CG8478-S2-modencode_R1_peak_1286 chrX 3274659 3276364 + 40 NA intron (FBgn0262656, intron 2 of 2) protein_coding-intron (FBgn0262656, intron 2 of 2) 8319 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_1094 chr3R 19697104 19697288 + 40 NA intron (FBgn0025574, intron 2 of 9) protein_coding-intron (FBgn0025574, intron 2 of 9) -11844 FBgn0004185 FBgn0004185 FBtr0084528 snRNA:U1:95Ca snRNA CG8478-S2-modencode_R1_peak_789 chr3L 18784247 18784664 + 40 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -25611 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding CG8478-S2-modencode_R1_peak_1131 chr3R 21929155 21929577 + 40 NA Intergenic Intergenic -4933 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_502 chr2R 15343933 15344748 + 39 NA exon (FBgn0260934, exon 1 of 16) protein_coding-exon (FBgn0260934, exon 1 of 16) 640 FBgn0002716 FBgn0002716 FBtr0086461 mei-W68 protein_coding CG8478-S2-modencode_R1_peak_276 chr2R 6011236 6011627 + 39 NA promoter-TSS (FBgn0050011) protein_coding-promoter-TSS (FBgn0050011) -362 FBgn0050011 FBgn0050011 FBtr0300943 gem protein_coding CG8478-S2-modencode_R1_peak_858 chr3R 2863042 2863414 + 39 NA Intergenic Intergenic -14829 FBgn0024289 FBgn0024289 FBtr0081627 Sodh-1 protein_coding CG8478-S2-modencode_R1_peak_984 chr3R 11924935 11926013 + 39 NA promoter-TSS (FBgn0026059) protein_coding-promoter-TSS (FBgn0026059) 536 FBgn0010379 FBgn0010379 FBtr0083228 Akt1 protein_coding CG8478-S2-modencode_R1_peak_1228 chrM 15473 15789 + 39 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1008 chr3R 12774393 12774650 + 39 NA intron (FBgn0000015, intron 1 of 6) protein_coding-intron (FBgn0000015, intron 1 of 6) -17186 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding CG8478-S2-modencode_R1_peak_1560 chrX 20122971 20123117 + 39 NA promoter-TSS (FBgn0031098) protein_coding-promoter-TSS (FBgn0031098) -528 FBgn0031098 FBgn0031098 FBtr0077341 CG17068 protein_coding CG8478-S2-modencode_R1_peak_1344 chrX 5907316 5907708 + 38 NA promoter-TSS (FBgn0029003) protein_coding-promoter-TSS (FBgn0029003) -301 FBgn0029003 FBgn0029003 FBtr0070890 mab-21 protein_coding CG8478-S2-modencode_R1_peak_582 chr3L 626084 628588 + 38 NA Intergenic Intergenic -1134 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_851 chr3R 2674345 2674643 + 38 NA promoter-TSS (FBgn0003339) protein_coding-promoter-TSS (FBgn0003339) 1209 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding CG8478-S2-modencode_R1_peak_1223 chrM 619 798 + 38 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1028 chr3R 14273799 14274791 + 38 NA intron (FBgn0004652, intron 2 of 7) protein_coding-intron (FBgn0004652, intron 2 of 7) -36942 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_444 chr2R 13339172 13340140 + 38 NA intron (FBgn0028956, intron 1 of 8) protein_coding-intron (FBgn0028956, intron 1 of 8) 443 FBgn0028956 FBgn0028956 FBtr0086955 mthl3 protein_coding CG8478-S2-modencode_R1_peak_618 chr3L 3035212 3035674 + 38 NA promoter-TSS (FBgn0035388) protein_coding-promoter-TSS (FBgn0035388) -550 FBgn0035388 FBgn0035388 FBtr0300175 CG2162 protein_coding CG8478-S2-modencode_R1_peak_782 chr3L 18393231 18393427 + 38 NA Intergenic Intergenic -1794 FBgn0011706 FBgn0011706 FBtr0075120 rpr protein_coding CG8478-S2-modencode_R1_peak_1076 chr3R 19121088 19121554 + 38 NA promoter-TSS (FBgn0003118) protein_coding-promoter-TSS (FBgn0003118) -5410 FBgn0039071 FBgn0039071 FBtr0084382 CG4434 protein_coding CG8478-S2-modencode_R1_peak_67 chr2L 7306803 7307127 + 38 NA promoter-TSS (FBgn0004009) protein_coding-promoter-TSS (FBgn0004009) -196 FBgn0004009 FBgn0004009 FBtr0079432 wg protein_coding CG8478-S2-modencode_R1_peak_541 chr2R 18158145 18158410 + 38 NA promoter-TSS (FBgn0020307) protein_coding-promoter-TSS (FBgn0020307) -148 FBgn0020307 FBgn0020307 FBtr0071776 dve protein_coding CG8478-S2-modencode_R1_peak_79 chr2L 8084163 8084877 + 37 NA intron (FBgn0261822, intron 1 of 6) protein_coding-intron (FBgn0261822, intron 1 of 6) -1538 FBgn0020240 FBgn0020240 FBtr0079543 Mcr protein_coding CG8478-S2-modencode_R1_peak_484 chr2R 14577348 14577679 + 37 NA intron (FBgn0262103, intron 1 of 7) protein_coding-intron (FBgn0262103, intron 1 of 7) 1876 FBgn0262103 FBgn0262103 FBtr0304024 Sik3 protein_coding CG8478-S2-modencode_R1_peak_1319 chrX 3680202 3680333 + 37 NA exon (FBgn0086899, exon 8 of 8) protein_coding-exon (FBgn0086899, exon 8 of 8) -3808 FBgn0029676 FBgn0029676 FBtr0333764 HIP-R protein_coding CG8478-S2-modencode_R1_peak_1242 chrUextra 8511089 8511246 + 37 NA NA NA NA NA CG8478-S2-modencode_R1_peak_55 chr2L 5306515 5307157 + 37 NA intron (FBgn0016076, intron 1 of 2) protein_coding-intron (FBgn0016076, intron 1 of 2) 1114 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_92 chr2L 9176001 9176716 + 37 NA promoter-TSS (FBgn0041092) protein_coding-promoter-TSS (FBgn0041092) 9580 FBgn0041092 FBgn0041092 FBtr0303872 tai protein_coding CG8478-S2-modencode_R1_peak_652 chr3L 5763584 5764261 + 37 NA promoter-TSS (FBgn0260936) protein_coding-promoter-TSS (FBgn0260936) -343 FBgn0260936 FBgn0260936 FBtr0330127 scny protein_coding CG8478-S2-modencode_R1_peak_1482 chrX 12647602 12648252 + 36 NA Intergenic Intergenic 6723 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding CG8478-S2-modencode_R1_peak_1010 chr3R 12881965 12882729 + 36 NA intron (FBgn0020493, intron 2 of 7) protein_coding-intron (FBgn0020493, intron 2 of 7) 2618 FBgn0020493 FBgn0020493 FBtr0083394 Dad protein_coding CG8478-S2-modencode_R1_peak_267 chr2R 5579541 5580698 + 36 NA exon (FBgn0023143, exon 1 of 4) protein_coding-exon (FBgn0023143, exon 1 of 4) 714 FBgn0023143 FBgn0023143 FBtr0310357 Uba1 protein_coding CG8478-S2-modencode_R1_peak_868 chr3R 4016427 4017013 + 36 NA Intergenic Intergenic 6713 FBgn0262994 FBgn0262994 FBtr0306837 CR43302 ncRNA CG8478-S2-modencode_R1_peak_1382 chrX 8304387 8304577 + 36 NA promoter-TSS (FBgn0262976) protein_coding-promoter-TSS (FBgn0262976) -351 FBgn0262976 FBgn0262976 FBtr0307287 lawc protein_coding CG8478-S2-modencode_R1_peak_1193 chr3R 26886207 26886821 + 36 NA promoter-TSS (FBgn0002413) protein_coding-promoter-TSS (FBgn0002413) 89 FBgn0002413 FBgn0002413 FBtr0085744 dco protein_coding CG8478-S2-modencode_R1_peak_955 chr3R 9727331 9727615 + 35 NA promoter-TSS (FBgn0000576) protein_coding-promoter-TSS (FBgn0000576) -108 FBgn0000576 FBgn0000576 FBtr0082863 ems protein_coding CG8478-S2-modencode_R1_peak_78 chr2L 8083458 8083961 + 35 NA promoter-TSS (FBgn0020240) protein_coding-promoter-TSS (FBgn0020240) -727 FBgn0020240 FBgn0020240 FBtr0079543 Mcr protein_coding CG8478-S2-modencode_R1_peak_899 chr3R 5253903 5254125 + 35 NA promoter-TSS (FBgn0261552) protein_coding-promoter-TSS (FBgn0261552) 10350 FBgn0261552 FBgn0261552 FBtr0302691 ps protein_coding CG8478-S2-modencode_R1_peak_1157 chr3R 24672409 24672974 + 35 NA intron (FBgn0264324, intron 2 of 13) protein_coding-intron (FBgn0264324, intron 2 of 12) 1669 FBgn0264324 FBgn0264324 FBtr0330305 spg protein_coding CG8478-S2-modencode_R1_peak_885 chr3R 5051810 5051898 + 35 NA intron (FBgn0003165, intron 3 of 12) protein_coding-intron (FBgn0003165, intron 3 of 12) 14135 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_936 chr3R 8106464 8106968 + 35 NA promoter-TSS (FBgn0003651) protein_coding-promoter-TSS (FBgn0003651) -158 FBgn0003651 FBgn0003651 FBtr0331183 svp protein_coding CG8478-S2-modencode_R1_peak_493 chr2R 15156158 15156884 + 35 NA Intergenic Intergenic -6710 FBgn0003254 FBgn0003254 FBtr0330058 rib protein_coding CG8478-S2-modencode_R1_peak_39 chr2L 3534145 3534524 + 35 NA Intergenic Intergenic 3545 FBgn0031550 FBgn0031550 FBtr0077529 Che-13 protein_coding CG8478-S2-modencode_R1_peak_831 chr3R 629135 629378 + 34 NA intron (FBgn0260794, intron 1 of 10) protein_coding-intron (FBgn0260794, intron 1 of 11) 8527 FBgn0026417 FBgn0026417 FBtr0078876 Hus1-like protein_coding CG8478-S2-modencode_R1_peak_148 chr2L 16422564 16423218 + 34 NA intron (FBgn0028523, intron 1 of 3) protein_coding-intron (FBgn0028523, intron 1 of 3) -5007 FBgn0086037 FBgn0086037 FBtr0114313 snoRNA:Me28S-A2958 snoRNA CG8478-S2-modencode_R1_peak_842 chr3R 2160512 2161126 + 34 NA promoter-TSS (FBgn0037429) protein_coding-promoter-TSS (FBgn0037429) -267 FBgn0037429 FBgn0037429 FBtr0301493 Osi19 protein_coding CG8478-S2-modencode_R1_peak_759 chr3L 17563163 17564016 + 34 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -4327 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_1030 chr3R 14300012 14300583 + 34 NA intron (FBgn0004652, intron 2 of 8) protein_coding-intron (FBgn0004652, intron 2 of 7) -62944 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_1075 chr3R 19118771 19119056 + 34 NA intron (FBgn0003118, intron 6 of 8) protein_coding-intron (FBgn0003118, intron 1 of 3) -3002 FBgn0039071 FBgn0039071 FBtr0084382 CG4434 protein_coding CG8478-S2-modencode_R1_peak_1434 chrX 10250563 10251227 + 34 NA TTS (FBgn0028331) protein_coding-TTS (FBgn0028331) 8692 FBgn0065046 FBgn0065046 FBtr0091641 snoRNA:U3:9B snoRNA CG8478-S2-modencode_R1_peak_569 chr2R 21003126 21003307 + 33 NA Intergenic Intergenic -13739 FBgn0050430 FBgn0050430 FBtr0072448 CG30430 protein_coding CG8478-S2-modencode_R1_peak_616 chr3L 2823442 2824128 + 33 NA intron (FBgn0263392, intron 5 of 10) protein_coding-intron (FBgn0263392, intron 4 of 9) 41530 FBgn0035375 FBgn0035375 FBtr0333442 pgant6 protein_coding CG8478-S2-modencode_R1_peak_261 chr2R 5171617 5172398 + 33 NA TTS (FBgn0033400) protein_coding-TTS (FBgn0033400) 595 FBgn0020621 FBgn0020621 FBtr0302603 Pkn protein_coding CG8478-S2-modencode_R1_peak_815 chr3L 21872506 21872633 + 33 NA promoter-TSS (FBgn0262737) protein_coding-promoter-TSS (FBgn0262737) 7570 FBgn0264470 FBgn0264470 FBtr0332737 CR43878 ncRNA CG8478-S2-modencode_R1_peak_40 chr2L 3538627 3540383 + 33 NA promoter-TSS (FBgn0024244) protein_coding-promoter-TSS (FBgn0024244) -230 FBgn0024244 FBgn0024244 FBtr0077531 drm protein_coding CG8478-S2-modencode_R1_peak_632 chr3L 3418075 3419266 + 33 NA promoter-TSS (FBgn0014388) protein_coding-promoter-TSS (FBgn0014388) -743 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding CG8478-S2-modencode_R1_peak_847 chr3R 2504256 2504580 + 33 NA promoter-TSS (FBgn0002522) protein_coding-promoter-TSS (FBgn0002522) -5754 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding CG8478-S2-modencode_R1_peak_876 chr3R 4636187 4637683 + 33 NA intron (FBgn0037635, intron 1 of 1) protein_coding-intron (FBgn0037635, intron 1 of 1) -1402 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding CG8478-S2-modencode_R1_peak_113 chr2L 12404444 12404789 + 33 NA promoter-TSS (FBgn0043841) protein_coding-promoter-TSS (FBgn0043841) 6342 FBgn0041195 FBgn0041195 FBtr0080365 Pkd2 protein_coding CG8478-S2-modencode_R1_peak_1237 chrU 7544519 7545071 + 32 NA NA NA NA NA CG8478-S2-modencode_R1_peak_406 chr2R 10391420 10392196 + 32 NA promoter-TSS (FBgn0024698) protein_coding-promoter-TSS (FBgn0024698) 345 FBgn0261823 FBgn0261823 FBtr0100154 Asx protein_coding CG8478-S2-modencode_R1_peak_720 chr3L 12646334 12646698 + 32 NA promoter-TSS (FBgn0263379) ncRNA-promoter-TSS (FBgn0263379) -326 FBgn0263379 FBgn0263379 FBtr0309061 CR43431 ncRNA CG8478-S2-modencode_R1_peak_1536 chrX 18671491 18671759 + 32 NA intron (FBgn0030955, intron 1 of 2) protein_coding-intron (FBgn0030955, intron 1 of 2) -2110 FBgn0030955 FBgn0030955 FBtr0074632 CG6891 protein_coding CG8478-S2-modencode_R1_peak_872 chr3R 4495007 4495277 + 32 NA promoter-TSS (FBgn0037607) protein_coding-promoter-TSS (FBgn0037607) -246 FBgn0012024 FBgn0012024 FBtr0081884 tRNA:Y1:85Aa tRNA CG8478-S2-modencode_R1_peak_455 chr2R 14013467 14013561 + 32 NA promoter-TSS (FBgn0028983) protein_coding-promoter-TSS (FBgn0028983) -177 FBgn0003520 FBgn0003520 FBtr0301614 stau protein_coding CG8478-S2-modencode_R1_peak_696 chr3L 10657907 10658065 + 32 NA TTS (FBgn0052068) protein_coding-TTS (FBgn0052068) 147 FBgn0010762 FBgn0010762 FBtr0331573 simj protein_coding CG8478-S2-modencode_R1_peak_910 chr3R 5757578 5757704 + 32 NA intron (FBgn0263097, intron 2 of 6) protein_coding-intron (FBgn0263097, intron 2 of 6) 54141 FBgn0037770 FBgn0037770 FBtr0082150 Art4 protein_coding CG8478-S2-modencode_R1_peak_47 chr2L 4811687 4811944 + 32 NA Intergenic Intergenic -1194 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding CG8478-S2-modencode_R1_peak_311 chr2R 6959060 6959777 + 32 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -13673 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_88 chr2L 8691172 8691923 + 31 NA promoter-TSS (FBgn0004914) protein_coding-promoter-TSS (FBgn0004914) 5316 FBgn0260861 FBgn0260861 FBtr0079730 Trs23 protein_coding CG8478-S2-modencode_R1_peak_1548 chrX 19531293 19532203 + 31 NA exon (FBgn0087008, exon 1 of 12) protein_coding-exon (FBgn0087008, exon 1 of 12) 637 FBgn0087008 FBgn0087008 FBtr0074762 e(y)3 protein_coding CG8478-S2-modencode_R1_peak_368 chr2R 8512890 8513048 + 31 NA promoter-TSS (FBgn0033756) protein_coding-promoter-TSS (FBgn0033756) -344 FBgn0033756 FBgn0033756 FBtr0110824 CG17760 protein_coding CG8478-S2-modencode_R1_peak_1360 chrX 7498533 7499122 + 31 NA Intergenic Intergenic -4354 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding CG8478-S2-modencode_R1_peak_825 chr3LHet 207006 207276 + 31 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1519 chrX 16342823 16343190 + 31 NA promoter-TSS (FBgn0054015) protein_coding-promoter-TSS (FBgn0054015) 296 FBgn0262734 FBgn0262734 FBtr0074281 Rbp2 protein_coding CG8478-S2-modencode_R1_peak_1314 chrX 3671106 3672125 + 31 NA TTS (FBgn0263532) pre_miRNA-TTS (FBgn0263532) 126 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_850 chr3R 2617157 2617470 + 31 NA promoter-TSS (FBgn0000439) protein_coding-promoter-TSS (FBgn0000439) -245 FBgn0000439 FBgn0000439 FBtr0081621 Dfd protein_coding CG8478-S2-modencode_R1_peak_1367 chrX 7596610 7596999 + 31 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) -5004 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_1450 chrX 10496471 10496922 + 31 NA promoter-TSS (FBgn0030218) protein_coding-promoter-TSS (FBgn0030218) -1017 FBgn0030218 FBgn0030218 FBtr0071510 CG1628 protein_coding CG8478-S2-modencode_R1_peak_77 chr2L 8030960 8031629 + 31 NA TTS (FBgn0031977) protein_coding-TTS (FBgn0031977) 573 FBgn0044323 FBgn0044323 FBtr0079539 Cka protein_coding CG8478-S2-modencode_R1_peak_467 chr2R 14293039 14293229 + 31 NA promoter-TSS (FBgn0063494) protein_coding-promoter-TSS (FBgn0063494) -384 FBgn0063494 FBgn0063494 FBtr0086674 GstE6 protein_coding CG8478-S2-modencode_R1_peak_1514 chrX 16043124 16043458 + 31 NA promoter-TSS (FBgn0042650) protein_coding-promoter-TSS (FBgn0042650) -24926 FBgn0042650 FBgn0042650 FBtr0310303 disco-r protein_coding CG8478-S2-modencode_R1_peak_70 chr2L 7828079 7828975 + 30 NA intron (FBgn0004177, intron 1 of 3) protein_coding-intron (FBgn0004177, intron 1 of 3) 784 FBgn0004177 FBgn0004177 FBtr0079525 mts protein_coding CG8478-S2-modencode_R1_peak_1445 chrX 10426173 10426960 + 30 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 34058 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_279 chr2R 6190353 6190558 + 30 NA promoter-TSS (FBgn0033504) protein_coding-promoter-TSS (FBgn0033504) 6821 FBgn0028426 FBgn0028426 FBtr0088360 JhI-1 protein_coding CG8478-S2-modencode_R1_peak_1305 chrX 3638424 3639044 + 30 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -25069 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_792 chr3L 18807119 18807613 + 30 NA intron (FBgn0036814, intron 2 of 5) protein_coding-intron (FBgn0036814, intron 2 of 5) 6409 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_716 chr3L 12426963 12427340 + 30 NA Intergenic Intergenic -1383 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding CG8478-S2-modencode_R1_peak_674 chr3L 8057041 8057393 + 30 NA exon (FBgn0262579, exon 1 of 12) protein_coding-exon (FBgn0262579, exon 1 of 12) 1608 FBgn0052361 FBgn0052361 FBtr0076741 tRNA:CR32361 tRNA CG8478-S2-modencode_R1_peak_1453 chrX 10709658 10709936 + 30 NA promoter-TSS (FBgn0262735) protein_coding-promoter-TSS (FBgn0262735) -1671 FBgn0262735 FBgn0262735 FBtr0073419 Imp protein_coding CG8478-S2-modencode_R1_peak_1521 chrX 16352598 16352948 + 30 NA TTS (FBgn0264255) protein_coding-TTS (FBgn0264255) 10063 FBgn0262734 FBgn0262734 FBtr0074281 Rbp2 protein_coding CG8478-S2-modencode_R1_peak_1051 chr3R 17010567 17010746 + 30 NA intron (FBgn0264357, intron 1 of 8) protein_coding-intron (FBgn0264357, intron 6 of 12) -16729 FBgn0260004 FBgn0260004 FBtr0084027 Snmp1 protein_coding CG8478-S2-modencode_R1_peak_1159 chr3R 25032488 25033096 + 30 NA Intergenic Intergenic -2937 FBgn0039651 FBgn0039651 FBtr0085406 CG14508 protein_coding CG8478-S2-modencode_R1_peak_864 chr3R 3349640 3350054 + 30 NA promoter-TSS (FBgn0015575) protein_coding-promoter-TSS (FBgn0015575) -371 FBgn0015575 FBgn0015575 FBtr0081550 alpha-Est7 protein_coding CG8478-S2-modencode_R1_peak_242 chr2R 3622432 3623081 + 30 NA exon (FBgn0042135, exon 1 of 13) protein_coding-exon (FBgn0042135, exon 1 of 13) 368 FBgn0042135 FBgn0042135 FBtr0330328 CG18812 protein_coding CG8478-S2-modencode_R1_peak_52 chr2L 5292428 5293896 + 30 NA Intergenic Intergenic -12560 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_1112 chr3R 20412256 20412629 + 30 NA intron (FBgn0263490, intron 1 of 4) protein_coding-intron (FBgn0263490, intron 1 of 5) 1067 FBgn0263490 FBgn0263490 FBtr0304914 mld protein_coding CG8478-S2-modencode_R1_peak_746 chr3L 16370877 16371265 + 29 NA intron (FBgn0036621, intron 1 of 3) protein_coding-intron (FBgn0036621, intron 1 of 3) 679 FBgn0036621 FBgn0036621 FBtr0331173 roq protein_coding CG8478-S2-modencode_R1_peak_981 chr3R 11830779 11830873 + 29 NA exon (FBgn0262028, exon 2 of 2) ncRNA-exon (FBgn0262028, exon 2 of 2) 2969 FBgn0262028 FBgn0262028 FBtr0303861 CR42839 ncRNA CG8478-S2-modencode_R1_peak_1034 chr3R 14748819 14749799 + 29 NA promoter-TSS (FBgn0261113) protein_coding-promoter-TSS (FBgn0261113) 5087 FBgn0038662 FBgn0038662 FBtr0083723 CG14290 protein_coding CG8478-S2-modencode_R1_peak_790 chr3L 18793172 18794720 + 29 NA exon (FBgn0001078, exon 1 of 10) protein_coding-exon (FBgn0001078, exon 1 of 10) 19829 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_753 chr3L 17043841 17043932 + 29 NA promoter-TSS (FBgn0036697) protein_coding-promoter-TSS (FBgn0036697) -491 FBgn0036697 FBgn0036697 FBtr0075283 rogdi protein_coding CG8478-S2-modencode_R1_peak_249 chr2R 3901887 3902081 + 29 NA promoter-TSS (FBgn0033250) protein_coding-promoter-TSS (FBgn0033250) -725 FBgn0033250 FBgn0033250 FBtr0304750 CG14762 protein_coding CG8478-S2-modencode_R1_peak_944 chr3R 8549620 8549731 + 29 NA Intergenic Intergenic -4161 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_60 chr2L 6323980 6324551 + 29 NA intron (FBgn0021873, intron 1 of 6) protein_coding-intron (FBgn0021873, intron 1 of 7) 498 FBgn0021873 FBgn0021873 FBtr0300039 Gef26 protein_coding CG8478-S2-modencode_R1_peak_1053 chr3R 17202042 17202439 + 29 NA intron (FBgn0002781, intron 3 of 4) protein_coding-intron (FBgn0002781, intron 3 of 4) 881 FBgn0002781 FBgn0002781 FBtr0084073 mod(mdg4) protein_coding CG8478-S2-modencode_R1_peak_262 chr2R 5296494 5297133 + 29 NA exon (FBgn0016078, exon 2 of 7) protein_coding-exon (FBgn0016078, exon 2 of 7) 4152 FBgn0016078 FBgn0016078 FBtr0306111 wun protein_coding CG8478-S2-modencode_R1_peak_1469 chrX 12548092 12548661 + 29 NA promoter-TSS (FBgn0015024) protein_coding-promoter-TSS (FBgn0015024) 560 FBgn0015024 FBgn0015024 FBtr0073682 CkIalpha protein_coding CG8478-S2-modencode_R1_peak_761 chr3L 17570579 17571608 + 29 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -11831 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_297 chr2R 6451713 6452671 + 29 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 6799 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_1209 chr4 817881 817969 + 29 NA Intergenic Intergenic -2134 FBgn0039939 FBgn0039939 FBtr0089242 CG11231 protein_coding CG8478-S2-modencode_R1_peak_771 chr3L 17988506 17988816 + 28 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) 7517 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_49 chr2L 5001234 5001675 + 28 NA intron (FBgn0053113, intron 1 of 4) protein_coding-intron (FBgn0053113, intron 1 of 4) 3474 FBgn0053113 FBgn0053113 FBtr0301538 Rtnl1 protein_coding CG8478-S2-modencode_R1_peak_1149 chr3R 23070375 23071483 + 28 NA promoter-TSS (FBgn0042111) protein_coding-promoter-TSS (FBgn0042111) -389 FBgn0042111 FBgn0042111 FBtr0333327 CG18766 protein_coding CG8478-S2-modencode_R1_peak_1484 chrX 12650381 12650842 + 28 NA TTS (FBgn0020513) protein_coding-TTS (FBgn0020513) 4039 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding CG8478-S2-modencode_R1_peak_1074 chr3R 19046973 19047651 + 28 NA intron (FBgn0262975, intron 1 of 10) protein_coding-intron (FBgn0262975, intron 1 of 10) 371 FBgn0262975 FBgn0262975 FBtr0308227 cnc protein_coding CG8478-S2-modencode_R1_peak_1259 chrX 1516947 1517514 + 28 NA intron (FBgn0000210, intron 1 of 7) protein_coding-intron (FBgn0000210, intron 1 of 7) -5042 FBgn0025390 FBgn0025390 FBtr0070284 Mur2B protein_coding CG8478-S2-modencode_R1_peak_778 chr3L 18056021 18056500 + 28 NA intron (FBgn0000568, intron 1 of 7) protein_coding-intron (FBgn0000568, intron 1 of 7) 1536 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding CG8478-S2-modencode_R1_peak_1065 chr3R 17721944 17722262 + 28 NA intron (FBgn0038917, intron 4 of 4) protein_coding-intron (FBgn0038917, intron 4 of 4) 6842 FBgn0264426 FBgn0264426 FBtr0332545 CR43844 ncRNA CG8478-S2-modencode_R1_peak_1231 chrU 5288473 5288585 + 28 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1406 chrX 9396208 9396873 + 28 NA TTS (FBgn0263508) ncRNA-TTS (FBgn0263508) 3993 FBgn0263508 FBgn0263508 FBtr0309529 CR43497 ncRNA CG8478-S2-modencode_R1_peak_853 chr3R 2718853 2719271 + 28 NA Intergenic Intergenic 11342 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding CG8478-S2-modencode_R1_peak_443 chr2R 13331823 13332066 + 28 NA TTS (FBgn0034219) protein_coding-TTS (FBgn0034219) 499 FBgn0027506 FBgn0027506 FBtr0086959 EDTP protein_coding CG8478-S2-modencode_R1_peak_375 chr2R 8878108 8879493 + 28 NA Intergenic Intergenic -2602 FBgn0053798 FBgn0053798 FBtr0091802 CG33798 protein_coding CG8478-S2-modencode_R1_peak_963 chr3R 10547983 10548439 + 28 NA intron (FBgn0262127, intron 1 of 8) protein_coding-intron (FBgn0262127, intron 1 of 8) 1767 FBgn0262127 FBgn0262127 FBtr0100008 kibra protein_coding CG8478-S2-modencode_R1_peak_837 chr3R 1089674 1089968 + 28 NA promoter-TSS (FBgn0264652) protein_coding-promoter-TSS (FBgn0264652) -845 FBgn0264652 FBgn0264652 FBtr0078782 Hph protein_coding CG8478-S2-modencode_R1_peak_913 chr3R 5907840 5909003 + 28 NA Intergenic Intergenic -7326 FBgn0037786 FBgn0037786 FBtr0309853 CG5361 protein_coding CG8478-S2-modencode_R1_peak_926 chr3R 6216700 6217019 + 27 NA intron (FBgn0259938, intron 1 of 2) protein_coding-intron (FBgn0259938, intron 1 of 3) 2874 FBgn0259938 FBgn0259938 FBtr0305152 cwo protein_coding CG8478-S2-modencode_R1_peak_233 chr2R 3137656 3137928 + 27 NA exon (FBgn0033153, exon 1 of 1) protein_coding-exon (FBgn0033153, exon 1 of 1) 1124 FBgn0033153 FBgn0033153 FBtr0089049 Gadd45 protein_coding CG8478-S2-modencode_R1_peak_86 chr2L 8478043 8478195 + 27 NA promoter-TSS (FBgn0262029) protein_coding-promoter-TSS (FBgn0262029) 770 FBgn0053194 FBgn0053194 FBtr0079676 CheA29a protein_coding CG8478-S2-modencode_R1_peak_74 chr2L 7976685 7977075 + 27 NA exon (FBgn0085450, exon 1 of 2) protein_coding-exon (FBgn0085450, exon 1 of 2) 185 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding CG8478-S2-modencode_R1_peak_367 chr2R 8500597 8500898 + 27 NA intron (FBgn0004435, intron 1 of 8) protein_coding-intron (FBgn0004435, intron 1 of 9) 502 FBgn0004435 FBgn0004435 FBtr0087833 Galpha49B protein_coding CG8478-S2-modencode_R1_peak_769 chr3L 17955315 17955422 + 27 NA promoter-TSS (FBgn0000568) protein_coding-promoter-TSS (FBgn0000568) 28236 FBgn0262793 FBgn0262793 FBtr0305909 CG43174 protein_coding CG8478-S2-modencode_R1_peak_210 chr2R 1669923 1670504 + 27 NA exon (FBgn0025693, exon 1 of 10) protein_coding-exon (FBgn0025693, exon 1 of 10) 147 FBgn0025693 FBgn0025693 FBtr0086056 CG11163 protein_coding CG8478-S2-modencode_R1_peak_1190 chr3R 26631465 26631979 + 27 NA intron (FBgn0011739, intron 1 of 7) protein_coding-intron (FBgn0011739, intron 1 of 7) 619 FBgn0011739 FBgn0011739 FBtr0085720 wts protein_coding CG8478-S2-modencode_R1_peak_672 chr3L 8049154 8049809 + 27 NA promoter-TSS (FBgn0026263) protein_coding-promoter-TSS (FBgn0026263) -6 FBgn0026263 FBgn0026263 FBtr0302329 bip1 protein_coding CG8478-S2-modencode_R1_peak_236 chr2R 3376221 3376951 + 27 NA promoter-TSS (FBgn0259745) protein_coding-promoter-TSS (FBgn0259745) -395 FBgn0259745 FBgn0259745 FBtr0300081 wech protein_coding CG8478-S2-modencode_R1_peak_1062 chr3R 17679445 17680051 + 27 NA intron (FBgn0015229, intron 1 of 1) protein_coding-intron (FBgn0015229, intron 1 of 1) 2236 FBgn0015229 FBgn0015229 FBtr0084157 glec protein_coding CG8478-S2-modencode_R1_peak_828 chr3R 13037 13239 + 27 NA TTS (FBgn0037213) protein_coding-TTS (FBgn0037213) 453 FBgn0053294 FBgn0053294 FBtr0308945 CR33294 pseudogene CG8478-S2-modencode_R1_peak_191 chr2L 22168446 22169134 + 27 NA intron (FBgn0032979, intron 1 of 6) protein_coding-intron (FBgn0032979, intron 1 of 6) 353 FBgn0032979 FBgn0032979 FBtr0085964 CG1832 protein_coding CG8478-S2-modencode_R1_peak_401 chr2R 10061851 10063319 + 27 NA intron (FBgn0000289, intron 1 of 11) protein_coding-intron (FBgn0000289, intron 1 of 9) 1410 FBgn0000289 FBgn0000289 FBtr0112795 cg protein_coding CG8478-S2-modencode_R1_peak_1185 chr3R 26589821 26590471 + 27 NA Intergenic Intergenic -1502 FBgn0004606 FBgn0004606 FBtr0085702 zfh1 protein_coding CG8478-S2-modencode_R1_peak_1566 chrX 21102615 21103062 + 27 NA promoter-TSS (FBgn0011954) tRNA-promoter-TSS (FBgn0011954) -280 FBgn0011954 FBgn0011954 FBtr0077184 tRNA:R:19F tRNA CG8478-S2-modencode_R1_peak_683 chr3L 9012406 9012662 + 27 NA promoter-TSS (FBgn0035956) protein_coding-promoter-TSS (FBgn0035956) -188 FBgn0035956 FBgn0035956 FBtr0076547 Doc2 protein_coding CG8478-S2-modencode_R1_peak_1364 chrX 7588305 7588507 + 27 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) 545 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding CG8478-S2-modencode_R1_peak_271 chr2R 5932803 5933208 + 27 NA intron (FBgn0033476, intron 1 of 6) protein_coding-intron (FBgn0033476, intron 1 of 6) -2010 FBgn0085249 FBgn0085249 FBtr0112413 CG34220 protein_coding CG8478-S2-modencode_R1_peak_1547 chrX 19472811 19473423 + 27 NA intron (FBgn0031030, intron 1 of 12) protein_coding-intron (FBgn0031030, intron 1 of 12) 656 FBgn0031030 FBgn0031030 FBtr0309237 Tao protein_coding CG8478-S2-modencode_R1_peak_613 chr3L 2635073 2635291 + 27 NA promoter-TSS (FBgn0035357) protein_coding-promoter-TSS (FBgn0035357) 3467 FBgn0250911 FBgn0250911 FBtr0290341 CG42245 protein_coding CG8478-S2-modencode_R1_peak_214 chr2R 2008029 2008287 + 27 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) 11188 FBgn0000546 FBgn0000546 FBtr0086011 EcR protein_coding CG8478-S2-modencode_R1_peak_33 chr2L 2130162 2130973 + 27 NA promoter-TSS (FBgn0004507) protein_coding-promoter-TSS (FBgn0004507) -248 FBgn0004507 FBgn0004507 FBtr0100485 GlyP protein_coding CG8478-S2-modencode_R1_peak_588 chr3L 634978 635294 + 27 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 2905 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA CG8478-S2-modencode_R1_peak_1120 chr3R 21341117 21341359 + 27 NA promoter-TSS (FBgn0011666) protein_coding-promoter-TSS (FBgn0011666) 9241 FBgn0039343 FBgn0039343 FBtr0084880 CG5111 protein_coding CG8478-S2-modencode_R1_peak_1122 chr3R 21344076 21344776 + 27 NA intron (FBgn0011666, intron 1 of 6) protein_coding-intron (FBgn0011666, intron 1 of 6) 12429 FBgn0039343 FBgn0039343 FBtr0084880 CG5111 protein_coding CG8478-S2-modencode_R1_peak_529 chr2R 17368064 17368480 + 27 NA intron (FBgn0010415, intron 1 of 6) protein_coding-intron (FBgn0010415, intron 1 of 5) -1162 FBgn0026369 FBgn0026369 FBtr0071642 Sara protein_coding CG8478-S2-modencode_R1_peak_1379 chrX 7987201 7987744 + 26 NA intron (FBgn0029996, intron 1 of 1) protein_coding-intron (FBgn0029996, intron 1 of 1) -1347 FBgn0029996 FBgn0029996 FBtr0071114 Ubc-E2H protein_coding CG8478-S2-modencode_R1_peak_1150 chr3R 23106959 23107426 + 26 NA promoter-TSS (FBgn0039507) protein_coding-promoter-TSS (FBgn0039507) 1760 FBgn0039507 FBgn0039507 FBtr0305974 mrt protein_coding CG8478-S2-modencode_R1_peak_501 chr2R 15338327 15338933 + 26 NA intron (FBgn0003887, intron 1 of 1) protein_coding-intron (FBgn0003887, intron 1 of 1) -1384 FBgn0034447 FBgn0034447 FBtr0086535 CG7744 protein_coding CG8478-S2-modencode_R1_peak_1132 chr3R 21929911 21930698 + 26 NA Intergenic Intergenic -5871 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_533 chr2R 17521933 17522776 + 26 NA promoter-TSS (FBgn0260720) ncRNA-promoter-TSS (FBgn0260720) 181 FBgn0034643 FBgn0034643 FBtr0330228 CG10321 protein_coding CG8478-S2-modencode_R1_peak_108 chr2L 11516526 11517026 + 26 NA promoter-TSS (FBgn0032364) protein_coding-promoter-TSS (FBgn0032364) 259 FBgn0032363 FBgn0032363 FBtr0080247 CG6509 protein_coding CG8478-S2-modencode_R1_peak_1483 chrX 12649069 12649940 + 26 NA Intergenic Intergenic 5146 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding CG8478-S2-modencode_R1_peak_1437 chrX 10357103 10357793 + 26 NA TTS (FBgn0261710) protein_coding-TTS (FBgn0261710) 2679 FBgn0083167 FBgn0083167 FBtr0071449 Neb-cGP protein_coding CG8478-S2-modencode_R1_peak_714 chr3L 12117355 12117592 + 26 NA intron (FBgn0022959, intron 1 of 2) protein_coding-intron (FBgn0022959, intron 1 of 3) 777 FBgn0022959 FBgn0022959 FBtr0076027 yps protein_coding CG8478-S2-modencode_R1_peak_946 chr3R 8837742 8839153 + 26 NA intron (FBgn0020496, intron 1 of 5) protein_coding-intron (FBgn0020496, intron 1 of 5) 1059 FBgn0020496 FBgn0020496 FBtr0082702 CtBP protein_coding CG8478-S2-modencode_R1_peak_488 chr2R 14689761 14690320 + 26 NA promoter-TSS (FBgn0010651) protein_coding-promoter-TSS (FBgn0010651) -136 FBgn0010651 FBgn0010651 FBtr0086635 l(2)08717 protein_coding CG8478-S2-modencode_R1_peak_621 chr3L 3246164 3246974 + 26 NA Intergenic Intergenic -1446 FBgn0263246 FBgn0263246 FBtr0308062 CG43389 protein_coding CG8478-S2-modencode_R1_peak_1118 chr3R 21298231 21298539 + 26 NA promoter-TSS (FBgn0039335) protein_coding-promoter-TSS (FBgn0039335) 393 FBgn0004509 FBgn0004509 FBtr0310618 Fur1 protein_coding CG8478-S2-modencode_R1_peak_1129 chr3R 21867732 21868722 + 26 NA promoter-TSS (FBgn0001139) protein_coding-promoter-TSS (FBgn0001139) 795 FBgn0001139 FBgn0001139 FBtr0084965 gro protein_coding CG8478-S2-modencode_R1_peak_826 chr3LHet 715428 715841 + 26 NA NA NA NA NA CG8478-S2-modencode_R1_peak_888 chr3R 5060535 5060931 + 26 NA intron (FBgn0003165, intron 1 of 12) protein_coding-intron (FBgn0003165, intron 1 of 12) 5256 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_998 chr3R 12257369 12257919 + 26 NA promoter-TSS (FBgn0051282) tRNA-promoter-TSS (FBgn0051282) -18 FBgn0051282 FBgn0051282 FBtr0083285 tRNA:CR31282 tRNA CG8478-S2-modencode_R1_peak_328 chr2R 6984977 6986213 + 26 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) 8726 FBgn0040765 FBgn0040765 FBtr0088210 luna protein_coding CG8478-S2-modencode_R1_peak_1281 chrX 3246886 3247479 + 26 NA Intergenic Intergenic -20010 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_209 chr2R 1669450 1669676 + 26 NA intron (FBgn0025693, intron 1 of 9) protein_coding-intron (FBgn0025693, intron 1 of 9) 797 FBgn0025693 FBgn0025693 FBtr0086056 CG11163 protein_coding CG8478-S2-modencode_R1_peak_348 chr2R 7490489 7491138 + 26 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 1628 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding CG8478-S2-modencode_R1_peak_165 chr2L 19141702 19141799 + 26 NA intron (FBgn0010300, intron 1 of 4) protein_coding-intron (FBgn0010300, intron 1 of 3) -6517 FBgn0086447 FBgn0086447 FBtr0081161 l(2)37Cg protein_coding CG8478-S2-modencode_R1_peak_1212 chr4 1041821 1041940 + 26 NA intron (FBgn0025741, intron 1 of 8) protein_coding-intron (FBgn0025741, intron 2 of 9) 5840 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding CG8478-S2-modencode_R1_peak_660 chr3L 7363451 7363611 + 26 NA promoter-TSS (FBgn0082598) protein_coding-promoter-TSS (FBgn0082598) -369 FBgn0082598 FBgn0082598 FBtr0332730 akirin protein_coding CG8478-S2-modencode_R1_peak_717 chr3L 12427547 12427853 + 26 NA Intergenic Intergenic -1932 FBgn0036285 FBgn0036285 FBtr0332087 toe protein_coding CG8478-S2-modencode_R1_peak_1428 chrX 10105633 10106069 + 26 NA intron (FBgn0030183, intron 1 of 1) protein_coding-intron (FBgn0030183, intron 1 of 2) -1152 FBgn0028342 FBgn0028342 FBtr0071438 l(1)G0230 protein_coding CG8478-S2-modencode_R1_peak_1059 chr3R 17477151 17477597 + 25 NA intron (FBgn0011766, intron 1 of 7) protein_coding-intron (FBgn0011766, intron 1 of 7) 11306 FBgn0038893 FBgn0038893 FBtr0084116 CG6353 protein_coding CG8478-S2-modencode_R1_peak_1144 chr3R 22362115 22362926 + 25 NA intron (FBgn0263289, intron 1 of 26) protein_coding-intron (FBgn0263289, intron 1 of 22) 448 FBgn0263289 FBgn0263289 FBtr0308629 scrib protein_coding CG8478-S2-modencode_R1_peak_807 chr3L 20614757 20615144 + 25 NA Intergenic Intergenic -1191 FBgn0001323 FBgn0001323 FBtr0078212 knrl protein_coding CG8478-S2-modencode_R1_peak_967 chr3R 10565964 10566736 + 25 NA promoter-TSS (FBgn0263929) protein_coding-promoter-TSS (FBgn0263929) 136 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding CG8478-S2-modencode_R1_peak_384 chr2R 9224889 9225554 + 25 NA Intergenic Intergenic -8275 FBgn0262391 FBgn0262391 FBtr0304273 mir-184 pre_miRNA CG8478-S2-modencode_R1_peak_169 chr2L 19425150 19425239 + 25 NA intron (FBgn0032779, intron 1 of 1) protein_coding-intron (FBgn0041789, intron 1 of 7) 1104 FBgn0032779 FBgn0032779 FBtr0302874 CG16771 protein_coding CG8478-S2-modencode_R1_peak_1345 chrX 6173216 6173495 + 25 NA promoter-TSS (FBgn0086558) protein_coding-promoter-TSS (FBgn0086558) -50 FBgn0086558 FBgn0086558 FBtr0070933 Ubi-p5E protein_coding CG8478-S2-modencode_R1_peak_380 chr2R 8930847 8930964 + 25 NA Intergenic Intergenic 3888 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding CG8478-S2-modencode_R1_peak_639 chr3L 3765665 3766134 + 25 NA promoter-TSS (FBgn0052264) protein_coding-promoter-TSS (FBgn0052264) -10698 FBgn0035458 FBgn0035458 FBtr0303094 CG10858 protein_coding CG8478-S2-modencode_R1_peak_708 chr3L 11112543 11113732 + 25 NA promoter-TSS (FBgn0036135) protein_coding-promoter-TSS (FBgn0036135) 738 FBgn0036134 FBgn0036134 FBtr0300785 fd68A protein_coding CG8478-S2-modencode_R1_peak_1316 chrX 3674006 3675335 + 25 NA exon (FBgn0086899, exon 1 of 8) protein_coding-exon (FBgn0086899, exon 1 of 8) 3181 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_388 chr2R 9813092 9813635 + 25 NA promoter-TSS (FBgn0013733) protein_coding-promoter-TSS (FBgn0013733) -14912 FBgn0013733 FBgn0013733 FBtr0304853 shot protein_coding CG8478-S2-modencode_R1_peak_617 chr3L 2867146 2867912 + 25 NA intron (FBgn0263392, intron 3 of 10) protein_coding-intron (FBgn0263392, intron 3 of 9) 11629 FBgn0263392 FBgn0263392 FBtr0309119 CG43444 protein_coding CG8478-S2-modencode_R1_peak_188 chr2L 21899334 21899428 + 25 NA Intergenic Intergenic -1092 FBgn0032965 FBgn0032965 FBtr0085950 CG11629 protein_coding CG8478-S2-modencode_R1_peak_528 chr2R 17347994 17348245 + 25 NA intron (FBgn0010415, intron 2 of 6) protein_coding-intron (FBgn0010415, intron 2 of 5) -21315 FBgn0026369 FBgn0026369 FBtr0071642 Sara protein_coding CG8478-S2-modencode_R1_peak_1394 chrX 9058010 9058415 + 25 NA promoter-TSS (FBgn0026206) protein_coding-promoter-TSS (FBgn0026206) 16 FBgn0026206 FBgn0026206 FBtr0333475 mei-P26 protein_coding CG8478-S2-modencode_R1_peak_538 chr2R 18100462 18100763 + 25 NA TTS (FBgn0034713) protein_coding-TTS (FBgn0034713) 266 FBgn0025186 FBgn0025186 FBtr0071774 ari-2 protein_coding CG8478-S2-modencode_R1_peak_1354 chrX 6753440 6753994 + 25 NA Intergenic Intergenic -7046 FBgn0029915 FBgn0029915 FBtr0071040 CG14434 protein_coding CG8478-S2-modencode_R1_peak_1568 chrX 21194257 21194710 + 25 NA promoter-TSS (FBgn0031174) protein_coding-promoter-TSS (FBgn0031174) 577 FBgn0029067 FBgn0029067 FBtr0077226 Dd protein_coding CG8478-S2-modencode_R1_peak_869 chr3R 4159606 4160263 + 25 NA promoter-TSS (FBgn0003129) protein_coding-promoter-TSS (FBgn0003129) -420 FBgn0003129 FBgn0003129 FBtr0111026 Poxm protein_coding CG8478-S2-modencode_R1_peak_895 chr3R 5177535 5177648 + 25 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) -2399 FBgn0086053 FBgn0086053 FBtr0114329 snoRNA:Me18S-G1358a snoRNA CG8478-S2-modencode_R1_peak_659 chr3L 6982116 6982323 + 25 NA Intergenic Intergenic -1503 FBgn0045759 FBgn0045759 FBtr0076900 bin protein_coding CG8478-S2-modencode_R1_peak_725 chr3L 13997176 13997380 + 25 NA intron (FBgn0036398, intron 2 of 7) protein_coding-intron (FBgn0036398, intron 2 of 7) 2051 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding CG8478-S2-modencode_R1_peak_928 chr3R 6361444 6361959 + 25 NA intron (FBgn0001235, intron 7 of 12) protein_coding-intron (FBgn0001235, intron 6 of 11) -22923 FBgn0263547 FBgn0263547 FBtr0309664 mir-4944 pre_miRNA CG8478-S2-modencode_R1_peak_1176 chr3R 26133785 26134158 + 25 NA intron (FBgn0010113, intron 1 of 5) protein_coding-intron (FBgn0010113, intron 1 of 5) -1612 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_164 chr2L 18936038 18936435 + 25 NA intron (FBgn0032723, intron 6 of 10) protein_coding-intron (FBgn0032723, intron 6 of 10) 7712 FBgn0032723 FBgn0032723 FBtr0081193 ssp3 protein_coding CG8478-S2-modencode_R1_peak_919 chr3R 5919058 5919671 + 25 NA promoter-TSS (FBgn0263413) ncRNA-promoter-TSS (FBgn0263413) -120 FBgn0263413 FBgn0263413 FBtr0309196 CR43459 ncRNA CG8478-S2-modencode_R1_peak_400 chr2R 10022151 10022673 + 24 NA intron (FBgn0040752, intron 1 of 11) protein_coding-intron (FBgn0040752, intron 1 of 11) 5991 FBgn0040752 FBgn0040752 FBtr0087601 Prosap protein_coding CG8478-S2-modencode_R1_peak_485 chr2R 14662838 14662993 + 24 NA promoter-TSS (FBgn0264679) ncRNA-promoter-TSS (FBgn0264679) -1 FBgn0264679 FBgn0264679 FBtr0333776 CR43964 ncRNA CG8478-S2-modencode_R1_peak_457 chr2R 14044513 14044954 + 24 NA promoter-TSS (FBgn0022238) protein_coding-promoter-TSS (FBgn0022238) -338 FBgn0022238 FBgn0022238 FBtr0300484 lolal protein_coding CG8478-S2-modencode_R1_peak_293 chr2R 6430783 6431128 + 24 NA promoter-TSS (FBgn0005630) protein_coding-promoter-TSS (FBgn0005630) -6180 FBgn0263483 FBgn0263483 FBtr0309782 snoRNA:lola-d snoRNA CG8478-S2-modencode_R1_peak_871 chr3R 4485166 4485576 + 24 NA intron (FBgn0263231, intron 1 of 3) protein_coding-intron (FBgn0263231, intron 1 of 3) 1112 FBgn0263231 FBgn0263231 FBtr0081888 bel protein_coding CG8478-S2-modencode_R1_peak_1238 chrUextra 439418 439522 + 24 NA NA NA NA NA CG8478-S2-modencode_R1_peak_921 chr3R 5926383 5926577 + 24 NA promoter-TSS (FBgn0262459) pre_miRNA-promoter-TSS (FBgn0262459) -194 FBgn0262459 FBgn0262459 FBtr0304500 mir-34 pre_miRNA CG8478-S2-modencode_R1_peak_706 chr3L 10891278 10891912 + 24 NA exon (FBgn0036111, exon 1 of 4) protein_coding-exon (FBgn0036111, exon 1 of 4) 628 FBgn0036111 FBgn0036111 FBtr0076251 Aps protein_coding CG8478-S2-modencode_R1_peak_1461 chrX 11711604 11711952 + 24 NA promoter-TSS (FBgn0262684) protein_coding-promoter-TSS (FBgn0262684) -592 FBgn0262684 FBgn0262684 FBtr0333015 CG43154 protein_coding CG8478-S2-modencode_R1_peak_18 chr2L 1643628 1643909 + 24 NA Intergenic Intergenic -7490 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_454 chr2R 13949456 13949711 + 24 NA promoter-TSS (FBgn0085415) protein_coding-promoter-TSS (FBgn0085415) -626 FBgn0085415 FBgn0085415 FBtr0112627 CG34386 protein_coding CG8478-S2-modencode_R1_peak_1163 chr3R 25516844 25517153 + 24 NA Intergenic Intergenic -1315 FBgn0039683 FBgn0039683 FBtr0085454 dmrt99B protein_coding CG8478-S2-modencode_R1_peak_441 chr2R 13279907 13280390 + 24 NA promoter-TSS (FBgn0050232) tRNA-promoter-TSS (FBgn0050232) 428 FBgn0011879 FBgn0011879 FBtr0086908 tRNA:H:56E tRNA CG8478-S2-modencode_R1_peak_702 chr3L 10845619 10846417 + 24 NA Intergenic Intergenic -5486 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_691 chr3L 10317967 10318569 + 24 NA Intergenic Intergenic 5322 FBgn0262381 FBgn0262381 FBtr0304227 mir-276b pre_miRNA CG8478-S2-modencode_R1_peak_1277 chrX 3057015 3057130 + 24 NA intron (FBgn0004647, intron 5 of 8) protein_coding-intron (FBgn0004647, intron 5 of 8) 10101 FBgn0028746 FBgn0028746 FBtr0070543 CG18508 protein_coding CG8478-S2-modencode_R1_peak_779 chr3L 18081286 18081415 + 24 NA promoter-TSS (FBgn0085282) protein_coding-promoter-TSS (FBgn0085282) -930 FBgn0085282 FBgn0085282 FBtr0112447 CG34253 protein_coding CG8478-S2-modencode_R1_peak_855 chr3R 2738553 2738969 + 24 NA intron (FBgn0260642, intron 2 of 6) protein_coding-intron (FBgn0260642, intron 1 of 4) -8357 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding CG8478-S2-modencode_R1_peak_110 chr2L 11807383 11808191 + 24 NA intron (FBgn0020309, intron 1 of 7) protein_coding-intron (FBgn0020309, intron 1 of 7) 1185 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding CG8478-S2-modencode_R1_peak_1020 chr3R 13526600 13527771 + 24 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) -14402 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding CG8478-S2-modencode_R1_peak_556 chr2R 19544842 19545064 + 24 NA promoter-TSS (FBgn0034886) protein_coding-promoter-TSS (FBgn0034886) -141 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding CG8478-S2-modencode_R1_peak_543 chr2R 18314460 18314554 + 24 NA promoter-TSS (FBgn0034730) protein_coding-promoter-TSS (FBgn0034730) -48 FBgn0034729 FBgn0034729 FBtr0071841 CG10344 protein_coding CG8478-S2-modencode_R1_peak_1026 chr3R 14238243 14238438 + 24 NA promoter-TSS (FBgn0038621) protein_coding-promoter-TSS (FBgn0038621) -987 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_1146 chr3R 22779677 22780617 + 24 NA intron (FBgn0039464, intron 2 of 5) protein_coding-intron (FBgn0039464, intron 2 of 5) -1172 FBgn0039464 FBgn0039464 FBtr0085085 CG6330 protein_coding CG8478-S2-modencode_R1_peak_889 chr3R 5061532 5062302 + 24 NA intron (FBgn0003165, intron 1 of 12) protein_coding-intron (FBgn0003165, intron 1 of 12) 4072 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_623 chr3L 3249141 3249521 + 24 NA promoter-TSS (FBgn0263617) ncRNA-promoter-TSS (FBgn0263617) -42 FBgn0263617 FBgn0263617 FBtr0309982 CR43626 ncRNA CG8478-S2-modencode_R1_peak_483 chr2R 14575989 14576988 + 24 NA TTS (FBgn0262102) protein_coding-TTS (FBgn0262102) 851 FBgn0262103 FBgn0262103 FBtr0304024 Sik3 protein_coding CG8478-S2-modencode_R1_peak_1271 chrX 2211470 2211787 + 24 NA intron (FBgn0003079, intron 2 of 5) protein_coding-intron (FBgn0003079, intron 2 of 5) 4669 FBgn0054052 FBgn0054052 FBtr0308938 CR34052 ncRNA CG8478-S2-modencode_R1_peak_1038 chr3R 16078786 16079174 + 24 NA intron (FBgn0262582, intron 1 of 18) protein_coding-intron (FBgn0262582, intron 1 of 18) -40007 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding CG8478-S2-modencode_R1_peak_854 chr3R 2733874 2734051 + 24 NA exon (FBgn0260642, exon 5 of 5) protein_coding-exon (FBgn0260642, exon 5 of 5) -3558 FBgn0262897 FBgn0262897 FBtr0306313 CG43252 protein_coding CG8478-S2-modencode_R1_peak_340 chr2R 7176664 7177091 + 24 NA TTS (FBgn0033610) protein_coding-TTS (FBgn0033610) 376 FBgn0033609 FBgn0033609 FBtr0088178 fbl6 protein_coding CG8478-S2-modencode_R1_peak_1331 chrX 4580184 4580615 + 24 NA exon (FBgn0022768, exon 1 of 3) protein_coding-exon (FBgn0022768, exon 1 of 3) 505 FBgn0022768 FBgn0022768 FBtr0070685 Pp2C1 protein_coding CG8478-S2-modencode_R1_peak_1263 chrX 2034580 2035089 + 24 NA promoter-TSS (FBgn0023507) protein_coding-promoter-TSS (FBgn0023507) -1886 FBgn0023507 FBgn0023507 FBtr0070383 CG3835 protein_coding CG8478-S2-modencode_R1_peak_1529 chrX 16970707 16972019 + 24 NA exon (FBgn0030812, exon 2 of 15) protein_coding-exon (FBgn0030812, exon 2 of 15) 567 FBgn0030812 FBgn0030812 FBtr0310525 CG8949 protein_coding CG8478-S2-modencode_R1_peak_915 chr3R 5909888 5910151 + 24 NA Intergenic Intergenic -6884 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_489 chr2R 14693704 14694105 + 24 NA Intergenic Intergenic -4000 FBgn0010651 FBgn0010651 FBtr0086635 l(2)08717 protein_coding CG8478-S2-modencode_R1_peak_1414 chrX 9520476 9520655 + 24 NA exon (FBgn0028341, exon 7 of 7) protein_coding-exon (FBgn0028341, exon 7 of 7) 10474 FBgn0261931 FBgn0261931 FBtr0303709 CG42797 protein_coding CG8478-S2-modencode_R1_peak_134 chr2L 14011417 14011735 + 24 NA promoter-TSS (FBgn0028909) tRNA-promoter-TSS (FBgn0028909) -940 FBgn0028909 FBgn0028909 FBtr0080609 tRNA:Q:34E tRNA CG8478-S2-modencode_R1_peak_638 chr3L 3461575 3461687 + 24 NA promoter-TSS (FBgn0026259) protein_coding-promoter-TSS (FBgn0026259) 316 FBgn0041164 FBgn0041164 FBtr0309840 armi protein_coding CG8478-S2-modencode_R1_peak_839 chr3R 1108584 1108894 + 24 NA exon (FBgn0013576, exon 1 of 5) protein_coding-exon (FBgn0013576, exon 1 of 5) -5182 FBgn0051538 FBgn0051538 FBtr0078819 CG31538 protein_coding CG8478-S2-modencode_R1_peak_237 chr2R 3418395 3418880 + 24 NA intron (FBgn0033188, intron 1 of 2) protein_coding-intron (FBgn0033188, intron 1 of 2) -1871 FBgn0033188 FBgn0033188 FBtr0088958 CG1600 protein_coding CG8478-S2-modencode_R1_peak_700 chr3L 10733156 10733533 + 24 NA Intergenic Intergenic -31748 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding CG8478-S2-modencode_R1_peak_932 chr3R 6503381 6503473 + 24 NA promoter-TSS (FBgn0037818) protein_coding-promoter-TSS (FBgn0037818) -535 FBgn0037818 FBgn0037818 FBtr0082323 CG6465 protein_coding CG8478-S2-modencode_R1_peak_63 chr2L 6833612 6834017 + 24 NA intron (FBgn0051632, intron 4 of 4) protein_coding-intron (FBgn0051632, intron 4 of 4) 11497 FBgn0051632 FBgn0051632 FBtr0079341 sens-2 protein_coding CG8478-S2-modencode_R1_peak_1454 chrX 11048687 11049182 + 24 NA promoter-TSS (FBgn0261277) protein_coding-promoter-TSS (FBgn0261277) -1099 FBgn0261277 FBgn0261277 FBtr0331743 rtv protein_coding CG8478-S2-modencode_R1_peak_824 chr3L 23689096 23689835 + 23 NA Intergenic Intergenic -18926 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding CG8478-S2-modencode_R1_peak_446 chr2R 13422795 13423306 + 23 NA promoter-TSS (FBgn0034237) protein_coding-promoter-TSS (FBgn0034237) 321 FBgn0263197 FBgn0263197 FBtr0086948 Patronin protein_coding CG8478-S2-modencode_R1_peak_797 chr3L 19072603 19073128 + 23 NA intron (FBgn0036844, intron 1 of 4) protein_coding-intron (FBgn0036844, intron 1 of 4) 6661 FBgn0036844 FBgn0036844 FBtr0075035 Mkp3 protein_coding CG8478-S2-modencode_R1_peak_308 chr2R 6754842 6755162 + 23 NA intron (FBgn0050015, intron 1 of 7) protein_coding-intron (FBgn0050015, intron 1 of 7) 7895 FBgn0050016 FBgn0050016 FBtr0088241 CG30016 protein_coding CG8478-S2-modencode_R1_peak_229 chr2R 2553566 2553784 + 23 NA intron (FBgn0000054, intron 1 of 2) protein_coding-intron (FBgn0000054, intron 2 of 3) -1980 FBgn0033085 FBgn0033085 FBtr0086114 CG15908 protein_coding CG8478-S2-modencode_R1_peak_1284 chrX 3272343 3272902 + 23 NA intron (FBgn0262656, intron 2 of 2) protein_coding-intron (FBgn0262656, intron 2 of 2) 5430 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_136 chr2L 14234830 14235091 + 23 NA promoter-TSS (FBgn0016930) protein_coding-promoter-TSS (FBgn0016930) -838 FBgn0016930 FBgn0016930 FBtr0329933 smi35A protein_coding CG8478-S2-modencode_R1_peak_195 chr2L 22365164 22365883 + 23 NA exon (FBgn0039972, exon 4 of 7) protein_coding-exon (FBgn0039972, exon 4 of 7) 11168 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding CG8478-S2-modencode_R1_peak_158 chr2L 18150994 18151747 + 23 NA intron (FBgn0041184, intron 1 of 3) protein_coding-intron (FBgn0041184, intron 1 of 3) 1040 FBgn0041184 FBgn0041184 FBtr0329929 Socs36E protein_coding CG8478-S2-modencode_R1_peak_942 chr3R 8542860 8544545 + 23 NA intron (FBgn0002719, intron 1 of 2) protein_coding-intron (FBgn0002719, intron 2 of 3) 1812 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_1480 chrX 12633086 12633378 + 23 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 3245 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding CG8478-S2-modencode_R1_peak_704 chr3L 10849205 10849389 + 23 NA Intergenic Intergenic -2207 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_449 chr2R 13676682 13676776 + 23 NA promoter-TSS (FBgn0028744) protein_coding-promoter-TSS (FBgn0028744) 185 FBgn0026316 FBgn0026316 FBtr0089553 UbcD10 protein_coding CG8478-S2-modencode_R1_peak_1538 chrX 19047158 19047320 + 23 NA exon (FBgn0261461, exon 2 of 8) protein_coding-exon (FBgn0261461, exon 2 of 8) -6462 FBgn0261461 FBgn0261461 FBtr0299625 RhoGAP18B protein_coding CG8478-S2-modencode_R1_peak_918 chr3R 5914744 5915447 + 23 NA Intergenic Intergenic -1808 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_259 chr2R 4926927 4927212 + 23 NA TTS (FBgn0033366) protein_coding-TTS (FBgn0033366) 2578 FBgn0033366 FBgn0033366 FBtr0088664 Ance-4 protein_coding CG8478-S2-modencode_R1_peak_1342 chrX 5795815 5796013 + 23 NA promoter-TSS (FBgn0000042) protein_coding-promoter-TSS (FBgn0000042) 1020 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding CG8478-S2-modencode_R1_peak_809 chr3L 21233211 21233324 + 23 NA promoter-TSS (FBgn0004865) protein_coding-promoter-TSS (FBgn0004865) 13558 FBgn0004865 FBgn0004865 FBtr0078307 Eip78C protein_coding CG8478-S2-modencode_R1_peak_1136 chr3R 21943259 21944243 + 23 NA intron (FBgn0051324, intron 3 of 4) protein_coding-intron (FBgn0051324, intron 1 of 2) -8630 FBgn0039413 FBgn0039413 FBtr0273389 CG14556 protein_coding CG8478-S2-modencode_R1_peak_299 chr2R 6454047 6454721 + 23 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 8991 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_332 chr2R 6996137 6996228 + 23 NA Intergenic Intergenic -1861 FBgn0040765 FBgn0040765 FBtr0088210 luna protein_coding CG8478-S2-modencode_R1_peak_506 chr2R 15519233 15519586 + 23 NA promoter-TSS (FBgn0003435) protein_coding-promoter-TSS (FBgn0003435) -3375 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding CG8478-S2-modencode_R1_peak_1317 chrX 3679069 3679168 + 23 NA exon (FBgn0086899, exon 5 of 8) protein_coding-exon (FBgn0086899, exon 5 of 8) -4957 FBgn0029676 FBgn0029676 FBtr0333764 HIP-R protein_coding CG8478-S2-modencode_R1_peak_724 chr3L 13995473 13996821 + 23 NA intron (FBgn0036398, intron 1 of 7) protein_coding-intron (FBgn0036398, intron 1 of 7) 920 FBgn0036398 FBgn0036398 FBtr0333050 CG9007 protein_coding CG8478-S2-modencode_R1_peak_935 chr3R 7774513 7774673 + 23 NA promoter-TSS (FBgn0051211) protein_coding-promoter-TSS (FBgn0051211) 258 FBgn0037963 FBgn0037963 FBtr0082513 Cad87A protein_coding CG8478-S2-modencode_R1_peak_1310 chrX 3666051 3667236 + 23 NA promoter-TSS (FBgn0086899) protein_coding-promoter-TSS (FBgn0086899) -30 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_305 chr2R 6491071 6492038 + 23 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) -18154 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_275 chr2R 5989277 5989424 + 22 NA intron (FBgn0004907, intron 1 of 6) protein_coding-intron (FBgn0004907, intron 1 of 6) -2259 FBgn0033485 FBgn0033485 FBtr0088425 RpLP0-like protein_coding CG8478-S2-modencode_R1_peak_487 chr2R 14687887 14688201 + 22 NA intron (FBgn0010651, intron 1 of 3) protein_coding-intron (FBgn0010651, intron 2 of 4) 1860 FBgn0010651 FBgn0010651 FBtr0086635 l(2)08717 protein_coding CG8478-S2-modencode_R1_peak_1264 chrX 2035843 2035937 + 22 NA promoter-TSS (FBgn0023507) protein_coding-promoter-TSS (FBgn0023507) -830 FBgn0023507 FBgn0023507 FBtr0070383 CG3835 protein_coding CG8478-S2-modencode_R1_peak_776 chr3L 18019256 18019381 + 22 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -14099 FBgn0052192 FBgn0052192 FBtr0300047 CG32192 protein_coding CG8478-S2-modencode_R1_peak_65 chr2L 7038147 7038954 + 22 NA TTS (FBgn0031883) protein_coding-TTS (FBgn0031883) -3809 FBgn0262872 FBgn0262872 FBtr0306230 milt protein_coding CG8478-S2-modencode_R1_peak_419 chr2R 12047663 12047996 + 22 NA intron (FBgn0034083, intron 1 of 8) protein_coding-intron (FBgn0034083, intron 1 of 8) -1530 FBgn0034082 FBgn0034082 FBtr0087250 CG10734 protein_coding CG8478-S2-modencode_R1_peak_1373 chrX 7603438 7604544 + 22 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) 2183 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_186 chr2L 21628717 21629751 + 22 NA intron (FBgn0022893, intron 1 of 2) protein_coding-intron (FBgn0022893, intron 1 of 2) 698 FBgn0022893 FBgn0022893 FBtr0085920 Df31 protein_coding CG8478-S2-modencode_R1_peak_1279 chrX 3188781 3189086 + 22 NA promoter-TSS (FBgn0000479) protein_coding-promoter-TSS (FBgn0000479) 21502 FBgn0029656 FBgn0029656 FBtr0070536 CG10793 protein_coding CG8478-S2-modencode_R1_peak_1507 chrX 15646054 15646186 + 22 NA TTS (FBgn0030683) protein_coding-TTS (FBgn0030683) 2910 FBgn0030683 FBgn0030683 FBtr0074087 CG8239 protein_coding CG8478-S2-modencode_R1_peak_1050 chr3R 16966983 16967350 + 22 NA intron (FBgn0264357, intron 1 of 12) protein_coding-intron (FBgn0264357, intron 1 of 12) 3174 FBgn0250820 FBgn0250820 FBtr0084017 CG5802 protein_coding CG8478-S2-modencode_R1_peak_966 chr3R 10564741 10565665 + 22 NA intron (FBgn0011217, intron 1 of 4) protein_coding-intron (FBgn0011217, intron 2 of 5) 1283 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding CG8478-S2-modencode_R1_peak_938 chr3R 8268393 8268964 + 22 NA promoter-TSS (FBgn0086687) protein_coding-promoter-TSS (FBgn0086687) -1085 FBgn0086687 FBgn0086687 FBtr0082630 desat1 protein_coding CG8478-S2-modencode_R1_peak_199 chr2R 601511 601942 + 22 NA intron (FBgn0026401, intron 10 of 23) protein_coding-intron (FBgn0026401, intron 9 of 22) 14789 FBgn0026401 FBgn0026401 FBtr0111118 Nipped-B protein_coding CG8478-S2-modencode_R1_peak_1492 chrX 13633510 13634098 + 22 NA promoter-TSS (FBgn0030519) protein_coding-promoter-TSS (FBgn0030519) -11 FBgn0030519 FBgn0030519 FBtr0331719 CG11151 protein_coding CG8478-S2-modencode_R1_peak_1165 chr3R 25597393 25597776 + 22 NA intron (FBgn0001297, intron 1 of 2) protein_coding-intron (FBgn0001297, intron 1 of 2) 8869 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding CG8478-S2-modencode_R1_peak_93 chr2L 9387190 9387804 + 22 NA promoter-TSS (FBgn0012036) protein_coding-promoter-TSS (FBgn0012036) -62 FBgn0012036 FBgn0012036 FBtr0332597 Aldh protein_coding CG8478-S2-modencode_R1_peak_46 chr2L 4810100 4810270 + 22 NA Intergenic Intergenic -2824 FBgn0031630 FBgn0031630 FBtr0077383 CG15629 protein_coding CG8478-S2-modencode_R1_peak_57 chr2L 5421589 5421850 + 22 NA Intergenic Intergenic -10123 FBgn0263866 FBgn0263866 FBtr0329835 CR43713 ncRNA CG8478-S2-modencode_R1_peak_1524 chrX 16480474 16481003 + 22 NA promoter-TSS (FBgn0030758) protein_coding-promoter-TSS (FBgn0030758) -1168 FBgn0030759 FBgn0030759 FBtr0074282 CG13014 protein_coding CG8478-S2-modencode_R1_peak_437 chr2R 12914826 12916141 + 22 NA intron (FBgn0023172, intron 1 of 23) protein_coding-intron (FBgn0023172, intron 1 of 22) 737 FBgn0023172 FBgn0023172 FBtr0305083 RhoGEF2 protein_coding CG8478-S2-modencode_R1_peak_1158 chr3R 24714912 24715178 + 22 NA promoter-TSS (FBgn0053203) protein_coding-promoter-TSS (FBgn0053203) -322 FBgn0053203 FBgn0053203 FBtr0301016 CG33203 protein_coding CG8478-S2-modencode_R1_peak_1396 chrX 9237669 9239010 + 22 NA intron (FBgn0085478, intron 2 of 10) protein_coding-intron (FBgn0085478, intron 2 of 10) 11921 FBgn0085478 FBgn0085478 FBtr0112755 CG34449 protein_coding CG8478-S2-modencode_R1_peak_355 chr2R 7520397 7521194 + 22 NA promoter-TSS (FBgn0033638) protein_coding-promoter-TSS (FBgn0033638) 7623 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding CG8478-S2-modencode_R1_peak_723 chr3L 13221568 13221736 + 22 NA promoter-TSS (FBgn0023095) protein_coding-promoter-TSS (FBgn0023095) -140 FBgn0023095 FBgn0023095 FBtr0305480 caps protein_coding CG8478-S2-modencode_R1_peak_1208 chr4 529100 529295 + 22 NA intron (FBgn0004607, intron 2 of 12) protein_coding-intron (FBgn0004607, intron 2 of 13) 6761 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding CG8478-S2-modencode_R1_peak_677 chr3L 8151910 8152575 + 22 NA promoter-TSS (FBgn0259916) protein_coding-promoter-TSS (FBgn0259916) -242 FBgn0259916 FBgn0259916 FBtr0332760 CG42445 protein_coding CG8478-S2-modencode_R1_peak_194 chr2L 22364268 22364768 + 22 NA intron (FBgn0039972, intron 3 of 7) protein_coding-intron (FBgn0039972, intron 2 of 6) 10163 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding CG8478-S2-modencode_R1_peak_337 chr2R 7090017 7090277 + 22 NA intron (FBgn0003396, intron 1 of 6) protein_coding-intron (FBgn0003396, intron 2 of 7) 16622 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding CG8478-S2-modencode_R1_peak_548 chr2R 18573307 18573582 + 22 NA exon (FBgn0020257, exon 1 of 1) protein_coding-exon (FBgn0020257, exon 1 of 1) 3034 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding CG8478-S2-modencode_R1_peak_657 chr3L 6897083 6897577 + 22 NA Intergenic Intergenic 9734 FBgn0041194 FBgn0041194 FBtr0076946 Prat2 protein_coding CG8478-S2-modencode_R1_peak_16 chr2L 1157609 1157803 + 22 NA promoter-TSS (FBgn0031312) protein_coding-promoter-TSS (FBgn0031312) -955 FBgn0031312 FBgn0031312 FBtr0331287 Tango14 protein_coding CG8478-S2-modencode_R1_peak_107 chr2L 11447450 11447665 + 22 NA Intergenic Intergenic -1954 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding CG8478-S2-modencode_R1_peak_835 chr3R 974981 975151 + 22 NA Intergenic Intergenic -10268 FBgn0037294 FBgn0037294 FBtr0078773 CG12590 protein_coding CG8478-S2-modencode_R1_peak_1179 chr3R 26160773 26161566 + 22 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) -28810 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_698 chr3L 10731336 10731675 + 22 NA Intergenic Intergenic -33587 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding CG8478-S2-modencode_R1_peak_389 chr2R 9840869 9841737 + 22 NA promoter-TSS (FBgn0050481) protein_coding-promoter-TSS (FBgn0050481) -397 FBgn0050481 FBgn0050481 FBtr0100285 mRpL53 protein_coding CG8478-S2-modencode_R1_peak_35 chr2L 2363569 2364623 + 22 NA promoter-TSS (FBgn0014010) protein_coding-promoter-TSS (FBgn0014010) -1498 FBgn0261647 FBgn0261647 FBtr0330666 Axud1 protein_coding CG8478-S2-modencode_R1_peak_423 chr2R 12157987 12158164 + 22 NA intron (FBgn0001308, intron 1 of 3) protein_coding-intron (FBgn0001308, intron 1 of 3) 1408 FBgn0001308 FBgn0001308 FBtr0087184 Khc protein_coding CG8478-S2-modencode_R1_peak_1553 chrX 19781430 19782090 + 22 NA exon (FBgn0086782, exon 1 of 1) protein_coding-exon (FBgn0086782, exon 1 of 1) 2333 FBgn0086782 FBgn0086782 FBtr0074802 amn protein_coding CG8478-S2-modencode_R1_peak_1449 chrX 10440194 10442454 + 22 NA promoter-TSS (FBgn0085443) protein_coding-promoter-TSS (FBgn0085443) 19300 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_416 chr2R 12017299 12017624 + 22 NA intron (FBgn0086676, intron 1 of 7) protein_coding-intron (FBgn0086676, intron 1 of 7) 4973 FBgn0086676 FBgn0086676 FBtr0089593 spin protein_coding CG8478-S2-modencode_R1_peak_554 chr2R 19524133 19524246 + 22 NA intron (FBgn0004795, intron 1 of 11) protein_coding-intron (FBgn0004795, intron 1 of 11) 4054 FBgn0004795 FBgn0004795 FBtr0072073 retn protein_coding CG8478-S2-modencode_R1_peak_758 chr3L 17556751 17557322 + 22 NA intron (FBgn0000567, intron 7 of 7) protein_coding-intron (FBgn0000567, intron 7 of 7) 2226 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_1189 chr3R 26629065 26629698 + 22 NA intron (FBgn0011739, intron 1 of 7) protein_coding-intron (FBgn0011739, intron 1 of 7) 2960 FBgn0011739 FBgn0011739 FBtr0085720 wts protein_coding CG8478-S2-modencode_R1_peak_673 chr3L 8051445 8051682 + 22 NA exon (FBgn0026263, exon 1 of 4) protein_coding-exon (FBgn0026263, exon 1 of 4) 1833 FBgn0052358 FBgn0052358 FBtr0076744 tRNA:CR32358 tRNA CG8478-S2-modencode_R1_peak_670 chr3L 8021197 8021287 + 22 NA TTS (FBgn0052370) tRNA-TTS (FBgn0052370) 476 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA CG8478-S2-modencode_R1_peak_138 chr2L 15339581 15339806 + 22 NA Intergenic Intergenic 5829 FBgn0001981 FBgn0001981 FBtr0080734 esg protein_coding CG8478-S2-modencode_R1_peak_606 chr3L 1861528 1861898 + 22 NA exon (FBgn0004636, exon 1 of 1) protein_coding-exon (FBgn0004636, exon 1 of 1) 103 FBgn0004636 FBgn0004636 FBtr0332671 R protein_coding CG8478-S2-modencode_R1_peak_669 chr3L 7860160 7860861 + 21 NA promoter-TSS (FBgn0016694) protein_coding-promoter-TSS (FBgn0016694) -41 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding CG8478-S2-modencode_R1_peak_945 chr3R 8807513 8808011 + 21 NA intron (FBgn0038100, intron 1 of 3) protein_coding-intron (FBgn0038100, intron 1 of 3) 994 FBgn0038100 FBgn0038100 FBtr0082693 Paip2 protein_coding CG8478-S2-modencode_R1_peak_495 chr2R 15180653 15181118 + 21 NA intron (FBgn0086358, intron 1 of 5) protein_coding-intron (FBgn0086358, intron 1 of 3) 851 FBgn0086358 FBgn0086358 FBtr0305333 Tab2 protein_coding CG8478-S2-modencode_R1_peak_1058 chr3R 17415433 17416060 + 21 NA exon (FBgn0013984, exon 1 of 12) protein_coding-exon (FBgn0013984, exon 1 of 12) 167 FBgn0013984 FBgn0013984 FBtr0290232 InR protein_coding CG8478-S2-modencode_R1_peak_965 chr3R 10563676 10564009 + 21 NA intron (FBgn0011217, intron 1 of 4) protein_coding-intron (FBgn0011217, intron 2 of 5) 2644 FBgn0011217 FBgn0011217 FBtr0310554 eff protein_coding CG8478-S2-modencode_R1_peak_667 chr3L 7856480 7856651 + 21 NA intron (FBgn0016694, intron 1 of 5) protein_coding-intron (FBgn0016694, intron 1 of 4) 3904 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding CG8478-S2-modencode_R1_peak_591 chr3L 640319 640880 + 21 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) -1660 FBgn0262451 FBgn0262451 FBtr0304469 ban pre_miRNA CG8478-S2-modencode_R1_peak_1452 chrX 10679702 10680155 + 21 NA intron (FBgn0003360, intron 1 of 4) protein_coding-intron (FBgn0003360, intron 1 of 3) -1437 FBgn0003360 FBgn0003360 FBtr0073423 sesB protein_coding CG8478-S2-modencode_R1_peak_230 chr2R 2759389 2759857 + 21 NA intron (FBgn0033109, intron 1 of 6) protein_coding-intron (FBgn0033109, intron 1 of 6) 651 FBgn0033109 FBgn0033109 FBtr0086208 coro protein_coding CG8478-S2-modencode_R1_peak_536 chr2R 17602054 17602445 + 21 NA intron (FBgn0004362, intron 2 of 3) protein_coding-intron (FBgn0004362, intron 1 of 2) 1413 FBgn0004362 FBgn0004362 FBtr0301410 HmgD protein_coding CG8478-S2-modencode_R1_peak_379 chr2R 8929673 8929762 + 21 NA Intergenic Intergenic 5076 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding CG8478-S2-modencode_R1_peak_1133 chr3R 21931047 21931309 + 21 NA Intergenic Intergenic -6745 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_468 chr2R 14300929 14301440 + 21 NA intron (FBgn0027835, intron 2 of 6) protein_coding-intron (FBgn0027835, intron 2 of 6) 1673 FBgn0027835 FBgn0027835 FBtr0086681 Dp1 protein_coding CG8478-S2-modencode_R1_peak_219 chr2R 2039308 2039417 + 21 NA TTS (FBgn0011938) tRNA-TTS (FBgn0011938) 819 FBgn0011938 FBgn0011938 FBtr0086016 tRNA:N5:42Ah tRNA CG8478-S2-modencode_R1_peak_372 chr2R 8804244 8805007 + 21 NA promoter-TSS (FBgn0010488) protein_coding-promoter-TSS (FBgn0010488) 1123 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding CG8478-S2-modencode_R1_peak_1154 chr3R 24372972 24373277 + 21 NA Intergenic Intergenic -2600 FBgn0039588 FBgn0039588 FBtr0085293 CG12413 protein_coding CG8478-S2-modencode_R1_peak_362 chr2R 8060241 8060930 + 21 NA intron (FBgn0014184, intron 1 of 2) protein_coding-intron (FBgn0014184, intron 1 of 2) -2016 FBgn0010621 FBgn0010621 FBtr0087988 Cct5 protein_coding CG8478-S2-modencode_R1_peak_817 chr3L 22817176 22817264 + 21 NA exon (FBgn0027339, exon 1 of 6) protein_coding-exon (FBgn0027339, exon 1 of 6) 9268 FBgn0027339 FBgn0027339 FBtr0100184 jim protein_coding CG8478-S2-modencode_R1_peak_1143 chr3R 22360374 22360898 + 21 NA exon (FBgn0039431, exon 1 of 11) protein_coding-exon (FBgn0039431, exon 1 of 11) 303 FBgn0039431 FBgn0039431 FBtr0302210 CG6490 protein_coding CG8478-S2-modencode_R1_peak_647 chr3L 4626094 4626416 + 21 NA promoter-TSS (FBgn0015805) protein_coding-promoter-TSS (FBgn0015805) -123 FBgn0262733 FBgn0262733 FBtr0302594 Src64B protein_coding CG8478-S2-modencode_R1_peak_1424 chrX 9623296 9623533 + 21 NA promoter-TSS (FBgn0020378) protein_coding-promoter-TSS (FBgn0020378) -267 FBgn0020378 FBgn0020378 FBtr0331335 Sp1 protein_coding CG8478-S2-modencode_R1_peak_104 chr2L 11045082 11045656 + 21 NA intron (FBgn0032330, intron 2 of 6) protein_coding-intron (FBgn0032330, intron 2 of 6) 10520 FBgn0040967 FBgn0040967 FBtr0080160 CG18666 protein_coding CG8478-S2-modencode_R1_peak_1197 chr3R 27049582 27050346 + 21 NA promoter-TSS (FBgn0039831) protein_coding-promoter-TSS (FBgn0039831) 3538 FBgn0039831 FBgn0039831 FBtr0113312 CG12054 protein_coding CG8478-S2-modencode_R1_peak_1252 chrX 530688 531289 + 21 NA intron (FBgn0003575, intron 1 of 5) protein_coding-intron (FBgn0003575, intron 1 of 5) 1068 FBgn0003575 FBgn0003575 FBtr0070120 su(s) protein_coding CG8478-S2-modencode_R1_peak_732 chr3L 14667200 14667297 + 21 NA promoter-TSS (FBgn0011928) tRNA-promoter-TSS (FBgn0011928) -135 FBgn0011927 FBgn0011927 FBtr0075713 tRNA:M3:70Fa tRNA CG8478-S2-modencode_R1_peak_752 chr3L 17003021 17003643 + 21 NA intron (FBgn0036684, intron 1 of 6) protein_coding-intron (FBgn0036684, intron 1 of 6) 5819 FBgn0036685 FBgn0036685 FBtr0332121 CG6664 protein_coding CG8478-S2-modencode_R1_peak_1109 chr3R 20145933 20146307 + 21 NA intron (FBgn0011785, intron 4 of 14) protein_coding-intron (FBgn0011785, intron 4 of 14) 1379 FBgn0011785 FBgn0011785 FBtr0084604 BRWD3 protein_coding CG8478-S2-modencode_R1_peak_1448 chrX 10429162 10430791 + 21 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 30648 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_1201 chr3R 27781404 27781762 + 21 NA intron (FBgn0011224, intron 5 of 15) protein_coding-intron (FBgn0011224, intron 4 of 13) 25308 FBgn0011224 FBgn0011224 FBtr0300265 heph protein_coding CG8478-S2-modencode_R1_peak_398 chr2R 9895896 9896271 + 21 NA promoter-TSS (FBgn0002643) protein_coding-promoter-TSS (FBgn0002643) -2597 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA CG8478-S2-modencode_R1_peak_156 chr2L 16852385 16852491 + 21 NA promoter-TSS (FBgn0051810) protein_coding-promoter-TSS (FBgn0051810) -70 FBgn0051810 FBgn0051810 FBtr0080925 CG31810 protein_coding CG8478-S2-modencode_R1_peak_1290 chrX 3308308 3308814 + 21 NA intron (FBgn0029657, intron 3 of 4) protein_coding-intron (FBgn0029657, intron 2 of 3) 12995 FBgn0052493 FBgn0052493 FBtr0070533 tRNA:CR32493 tRNA CG8478-S2-modencode_R1_peak_564 chr2R 20430789 20431276 + 21 NA promoter-TSS (FBgn0035023) protein_coding-promoter-TSS (FBgn0035023) -185 FBgn0035023 FBgn0035023 FBtr0300187 itp protein_coding CG8478-S2-modencode_R1_peak_1384 chrX 8463212 8463518 + 21 NA TTS (FBgn0030050) protein_coding-TTS (FBgn0030050) 1616 FBgn0030050 FBgn0030050 FBtr0071232 CG12111 protein_coding CG8478-S2-modencode_R1_peak_96 chr2L 9568232 9568698 + 21 NA promoter-TSS (FBgn0032130) protein_coding-promoter-TSS (FBgn0032130) -1852 FBgn0032130 FBgn0032130 FBtr0079835 CG3838 protein_coding CG8478-S2-modencode_R1_peak_412 chr2R 11236900 11237887 + 21 NA promoter-TSS (FBgn0034013) protein_coding-promoter-TSS (FBgn0034013) -266 FBgn0034013 FBgn0034013 FBtr0087382 unc-5 protein_coding CG8478-S2-modencode_R1_peak_62 chr2L 6787416 6787756 + 21 NA promoter-TSS (FBgn0015776) protein_coding-promoter-TSS (FBgn0015776) -725 FBgn0015776 FBgn0015776 FBtr0332370 nrv1 protein_coding CG8478-S2-modencode_R1_peak_1011 chr3R 12940241 12940459 + 21 NA intron (FBgn0014141, intron 3 of 17) protein_coding-intron (FBgn0014141, intron 2 of 15) -5851 FBgn0085307 FBgn0085307 FBtr0112473 CG34278 protein_coding CG8478-S2-modencode_R1_peak_1049 chr3R 16895548 16895707 + 21 NA TTS (FBgn0003257) protein_coding-TTS (FBgn0003257) 3414 FBgn0003257 FBgn0003257 FBtr0084038 r-l protein_coding CG8478-S2-modencode_R1_peak_1433 chrX 10223849 10224420 + 21 NA promoter-TSS (FBgn0011770) protein_coding-promoter-TSS (FBgn0011770) -252 FBgn0011770 FBgn0011770 FBtr0071472 Gip protein_coding CG8478-S2-modencode_R1_peak_241 chr2R 3552893 3553173 + 21 NA promoter-TSS (FBgn0033205) protein_coding-promoter-TSS (FBgn0033205) -305 FBgn0033205 FBgn0033205 FBtr0088923 CG2064 protein_coding CG8478-S2-modencode_R1_peak_1125 chr3R 21714417 21714868 + 21 NA exon (FBgn0028717, exon 1 of 4) protein_coding-exon (FBgn0028717, exon 1 of 4) 303 FBgn0028717 FBgn0028717 FBtr0084937 Lnk protein_coding CG8478-S2-modencode_R1_peak_1204 chr4 80675 80899 + 21 NA exon (FBgn0264617, exon 3 of 4) ncRNA-exon (FBgn0264617, exon 3 of 4) 3664 FBgn0264617 FBgn0264617 FBtr0333704 CR43957 ncRNA CG8478-S2-modencode_R1_peak_805 chr3L 19922166 19922526 + 21 NA promoter-TSS (FBgn0036920) protein_coding-promoter-TSS (FBgn0036920) 503 FBgn0036921 FBgn0036921 FBtr0331800 RhoGDI protein_coding CG8478-S2-modencode_R1_peak_664 chr3L 7797936 7798886 + 21 NA promoter-TSS (FBgn0052369) protein_coding-promoter-TSS (FBgn0052369) 4514 FBgn0052369 FBgn0052369 FBtr0076783 CG32369 protein_coding CG8478-S2-modencode_R1_peak_450 chr2R 13709873 13710251 + 21 NA intron (FBgn0259211, intron 3 of 13) protein_coding-intron (FBgn0259211, intron 3 of 12) -1008 FBgn0259211 FBgn0259211 FBtr0300540 grh protein_coding CG8478-S2-modencode_R1_peak_137 chr2L 14581004 14581159 + 21 NA Intergenic Intergenic 7153 FBgn0261566 FBgn0261566 FBtr0302802 CG42680 protein_coding CG8478-S2-modencode_R1_peak_734 chr3L 15097760 15098029 + 21 NA intron (FBgn0262707, intron 1 of 3) protein_coding-intron (FBgn0262707, intron 1 of 3) -1088 FBgn0262707 FBgn0262707 FBtr0075635 CTPsyn protein_coding CG8478-S2-modencode_R1_peak_1087 chr3R 19162775 19163226 + 21 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 8884 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_292 chr2R 6430278 6430445 + 21 NA intron (FBgn0005630, intron 1 of 5) protein_coding-intron (FBgn0005630, intron 1 of 5) -5586 FBgn0263483 FBgn0263483 FBtr0309782 snoRNA:lola-d snoRNA CG8478-S2-modencode_R1_peak_959 chr3R 10199270 10199366 + 21 NA promoter-TSS (FBgn0024321) protein_coding-promoter-TSS (FBgn0024321) -1850 FBgn0086058 FBgn0086058 FBtr0114334 snoRNA:Me18S-G1189 snoRNA CG8478-S2-modencode_R1_peak_507 chr2R 15615077 15615197 + 21 NA promoter-TSS (FBgn0011849) tRNA-promoter-TSS (FBgn0011849) -101 FBgn0011849 FBgn0011849 FBtr0086447 tRNA:E4:56Fb tRNA CG8478-S2-modencode_R1_peak_1476 chrX 12621864 12622198 + 20 NA intron (FBgn0264678, intron 1 of 1) protein_coding-intron (FBgn0263865, intron 2 of 9) -9538 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA CG8478-S2-modencode_R1_peak_1221 chr4 1276269 1276407 + 20 NA TTS (FBgn0053653) protein_coding-TTS (FBgn0053653) 41775 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_1285 chrX 3273426 3274010 + 20 NA intron (FBgn0262656, intron 2 of 2) protein_coding-intron (FBgn0262656, intron 2 of 2) 6526 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_890 chr3R 5062883 5063071 + 20 NA promoter-TSS (FBgn0003165) protein_coding-promoter-TSS (FBgn0003165) 3012 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_118 chr2L 12514329 12514417 + 20 NA intron (FBgn0259176, intron 5 of 6) protein_coding-intron (FBgn0259176, intron 6 of 7) 6265 FBgn0263458 FBgn0263458 FBtr0309757 snoRNA:CG43051-a snoRNA CG8478-S2-modencode_R1_peak_333 chr2R 6998272 6998492 + 20 NA Intergenic Intergenic -4061 FBgn0040765 FBgn0040765 FBtr0088210 luna protein_coding CG8478-S2-modencode_R1_peak_1435 chrX 10259705 10260183 + 20 NA TTS (FBgn0052679) protein_coding-TTS (FBgn0052679) 402 FBgn0028331 FBgn0028331 FBtr0071470 l(1)G0289 protein_coding CG8478-S2-modencode_R1_peak_772 chr3L 17995334 17995535 + 20 NA TTS (FBgn0086081) snoRNA-TTS (FBgn0086081) 744 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_1555 chrX 19788026 19788231 + 20 NA intron (FBgn0052529, intron 1 of 5) protein_coding-intron (FBgn0052529, intron 4 of 8) -4035 FBgn0086782 FBgn0086782 FBtr0074802 amn protein_coding CG8478-S2-modencode_R1_peak_170 chr2L 19425496 19425697 + 20 NA promoter-TSS (FBgn0032780) protein_coding-promoter-TSS (FBgn0032780) -726 FBgn0032780 FBgn0032780 FBtr0081203 CG13085 protein_coding CG8478-S2-modencode_R1_peak_791 chr3L 18805356 18805716 + 20 NA intron (FBgn0036814, intron 2 of 5) protein_coding-intron (FBgn0036814, intron 2 of 5) 8239 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_12 chr2L 521358 521848 + 20 NA intron (FBgn0003963, intron 2 of 8) protein_coding-intron (FBgn0003963, intron 1 of 7) 20977 FBgn0010602 FBgn0010602 FBtr0310029 lwr protein_coding CG8478-S2-modencode_R1_peak_97 chr2L 9698520 9698971 + 20 NA intron (FBgn0000273, intron 1 of 2) protein_coding-intron (FBgn0000273, intron 1 of 2) 548 FBgn0000273 FBgn0000273 FBtr0079852 Pka-C1 protein_coding CG8478-S2-modencode_R1_peak_405 chr2R 10368953 10369706 + 20 NA intron (FBgn0001332, intron 1 of 3) protein_coding-intron (FBgn0001332, intron 1 of 3) 613 FBgn0001332 FBgn0001332 FBtr0087492 L protein_coding CG8478-S2-modencode_R1_peak_239 chr2R 3502485 3502592 + 20 NA promoter-TSS (FBgn0033196) protein_coding-promoter-TSS (FBgn0033196) 5678 FBgn0033196 FBgn0033196 FBtr0088950 CG1358 protein_coding CG8478-S2-modencode_R1_peak_145 chr2L 16279909 16280229 + 20 NA intron (FBgn0001994, intron 1 of 2) protein_coding-intron (FBgn0001994, intron 1 of 2) 7659 FBgn0001994 FBgn0001994 FBtr0080854 crp protein_coding CG8478-S2-modencode_R1_peak_61 chr2L 6724244 6724336 + 20 NA promoter-TSS (FBgn0025777) protein_coding-promoter-TSS (FBgn0025777) 387 FBgn0046704 FBgn0046704 FBtr0329943 Liprin-alpha protein_coding CG8478-S2-modencode_R1_peak_633 chr3L 3419913 3420794 + 20 NA intron (FBgn0014388, intron 1 of 1) protein_coding-intron (FBgn0014388, intron 1 of 1) -2426 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding CG8478-S2-modencode_R1_peak_1151 chr3R 23406328 23406535 + 20 NA intron (FBgn0027492, intron 1 of 9) protein_coding-intron (FBgn0027492, intron 1 of 8) 834 FBgn0027492 FBgn0027492 FBtr0085209 wdb protein_coding CG8478-S2-modencode_R1_peak_1558 chrX 20102119 20102343 + 20 NA intron (FBgn0003654, intron 4 of 6) protein_coding-intron (FBgn0003654, intron 5 of 7) -5178 FBgn0053498 FBgn0053498 FBtr0089611 CG33498 protein_coding CG8478-S2-modencode_R1_peak_654 chr3L 5919704 5919995 + 20 NA promoter-TSS (FBgn0053523) protein_coding-promoter-TSS (FBgn0053523) 2696 FBgn0053523 FBgn0053523 FBtr0091476 CG33523 protein_coding CG8478-S2-modencode_R1_peak_490 chr2R 14745335 14745471 + 20 NA promoter-TSS (FBgn0034405) protein_coding-promoter-TSS (FBgn0034405) 40 FBgn0034405 FBgn0034405 FBtr0300593 Jheh2 protein_coding CG8478-S2-modencode_R1_peak_1486 chrX 12679091 12679370 + 20 NA promoter-TSS (FBgn0052647) protein_coding-promoter-TSS (FBgn0052647) -239 FBgn0052647 FBgn0052647 FBtr0073703 CG32647 protein_coding CG8478-S2-modencode_R1_peak_1471 chrX 12555485 12555977 + 20 NA intron (FBgn0011837, intron 2 of 3) protein_coding-intron (FBgn0011837, intron 2 of 3) 2236 FBgn0053963 FBgn0053963 FBtr0100004 CR33963 ncRNA CG8478-S2-modencode_R1_peak_1043 chr3R 16607567 16607965 + 20 NA promoter-TSS (FBgn0038826) protein_coding-promoter-TSS (FBgn0038826) -9443 FBgn0046689 FBgn0046689 FBtr0083996 Takl1 protein_coding CG8478-S2-modencode_R1_peak_1388 chrX 8651827 8652043 + 20 NA exon (FBgn0026411, exon 7 of 7) protein_coding-exon (FBgn0026411, exon 7 of 7) 27451 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding CG8478-S2-modencode_R1_peak_811 chr3L 21469758 21470018 + 20 NA promoter-TSS (FBgn0014143) protein_coding-promoter-TSS (FBgn0014143) -309 FBgn0014143 FBgn0014143 FBtr0078395 croc protein_coding CG8478-S2-modencode_R1_peak_950 chr3R 9291834 9292047 + 20 NA promoter-TSS (FBgn0040554) ncRNA-promoter-TSS (FBgn0040554) -112 FBgn0040554 FBgn0040554 FBtr0309274 CR17025 ncRNA CG8478-S2-modencode_R1_peak_756 chr3L 17526621 17526917 + 20 NA promoter-TSS (FBgn0259174) protein_coding-promoter-TSS (FBgn0259174) 3588 FBgn0259174 FBgn0259174 FBtr0299642 Nedd4 protein_coding CG8478-S2-modencode_R1_peak_438 chr2R 13028029 13028170 + 20 NA promoter-TSS (FBgn0262563) protein_coding-promoter-TSS (FBgn0262563) 285 FBgn0262567 FBgn0262567 FBtr0304890 CG43107 protein_coding CG8478-S2-modencode_R1_peak_347 chr2R 7481696 7482095 + 20 NA intron (FBgn0033636, intron 1 of 16) protein_coding-intron (FBgn0033636, intron 1 of 16) -2905 FBgn0086658 FBgn0086658 FBtr0091640 snoRNA:Psi28S-1180 snoRNA CG8478-S2-modencode_R1_peak_1375 chrX 7832053 7832265 + 20 NA intron (FBgn0260970, intron 2 of 11) protein_coding-intron (FBgn0260970, intron 1 of 10) 2230 FBgn0260970 FBgn0260970 FBtr0331299 CG42593 protein_coding CG8478-S2-modencode_R1_peak_922 chr3R 5934259 5935239 + 20 NA promoter-TSS (FBgn0028734) protein_coding-promoter-TSS (FBgn0028734) 1094 FBgn0028734 FBgn0028734 FBtr0082196 Fmr1 protein_coding CG8478-S2-modencode_R1_peak_112 chr2L 12366060 12366172 + 20 NA promoter-TSS (FBgn0262475) protein_coding-promoter-TSS (FBgn0262475) 9675 FBgn0032424 FBgn0032424 FBtr0080354 CG17010 protein_coding CG8478-S2-modencode_R1_peak_1301 chrX 3635929 3636112 + 20 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -22355 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_1341 chrX 5793511 5793789 + 20 NA Intergenic Intergenic -1244 FBgn0000042 FBgn0000042 FBtr0070823 Act5C protein_coding CG8478-S2-modencode_R1_peak_426 chr2R 12481780 12482462 + 20 NA promoter-TSS (FBgn0034142) protein_coding-promoter-TSS (FBgn0034142) 97 FBgn0034142 FBgn0034142 FBtr0087120 CG8306 protein_coding CG8478-S2-modencode_R1_peak_25 chr2L 1668538 1669352 + 20 NA intron (FBgn0086758, intron 1 of 5) protein_coding-intron (FBgn0086758, intron 2 of 6) 17687 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_757 chr3L 17550459 17550564 + 20 NA exon (FBgn0025455, exon 1 of 4) protein_coding-exon (FBgn0025455, exon 1 of 4) 377 FBgn0025455 FBgn0025455 FBtr0075206 CycT protein_coding CG8478-S2-modencode_R1_peak_456 chr2R 14029224 14029475 + 20 NA promoter-TSS (FBgn0083054) snoRNA-promoter-TSS (FBgn0083054) 527 FBgn0261619 FBgn0261619 FBtr0086740 pAbp protein_coding CG8478-S2-modencode_R1_peak_291 chr2R 6419530 6419621 + 20 NA exon (FBgn0005630, exon 5 of 6) protein_coding-exon (FBgn0005630, exon 5 of 6) 3008 FBgn0005630 FBgn0005630 FBtr0089362 lola protein_coding CG8478-S2-modencode_R1_peak_920 chr3R 5923767 5924047 + 20 NA exon (FBgn0263413, exon 1 of 1) ncRNA-exon (FBgn0263413, exon 1 of 1) -1895 FBgn0262419 FBgn0262419 FBtr0304362 mir-277 pre_miRNA CG8478-S2-modencode_R1_peak_1478 chrX 12631251 12631892 + 20 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 4906 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding CG8478-S2-modencode_R1_peak_464 chr2R 14242692 14242836 + 20 NA intron (FBgn0010575, intron 1 of 10) protein_coding-intron (FBgn0010575, intron 1 of 11) 2037 FBgn0010575 FBgn0010575 FBtr0329996 sbb protein_coding CG8478-S2-modencode_R1_peak_334 chr2R 7073245 7073477 + 20 NA intron (FBgn0003396, intron 1 of 7) protein_coding-intron (FBgn0003396, intron 1 of 7) 12053 FBgn0003396 FBgn0003396 FBtr0088100 shn protein_coding CG8478-S2-modencode_R1_peak_1085 chr3R 19161201 19161387 + 20 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 10590 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_743 chr3L 16036458 16036603 + 20 NA promoter-TSS (FBgn0260635) protein_coding-promoter-TSS (FBgn0260635) -5805 FBgn0264602 FBgn0264602 FBtr0333615 CR43951 ncRNA CG8478-S2-modencode_R1_peak_251 chr2R 3918390 3918685 + 20 NA promoter-TSS (FBgn0025360) protein_coding-promoter-TSS (FBgn0025360) -252 FBgn0025360 FBgn0025360 FBtr0088866 Optix protein_coding CG8478-S2-modencode_R1_peak_937 chr3R 8251659 8252031 + 20 NA promoter-TSS (FBgn0038045) protein_coding-promoter-TSS (FBgn0038045) -206 FBgn0004103 FBgn0004103 FBtr0082595 Pp1-87B protein_coding CG8478-S2-modencode_R1_peak_687 chr3L 9671319 9671516 + 20 NA promoter-TSS (FBgn0036028) protein_coding-promoter-TSS (FBgn0036028) 786 FBgn0016081 FBgn0016081 FBtr0333858 fry protein_coding CG8478-S2-modencode_R1_peak_32 chr2L 1987208 1987895 + 20 NA promoter-TSS (FBgn0031381) protein_coding-promoter-TSS (FBgn0031381) 237 FBgn0001125 FBgn0001125 FBtr0077868 Got2 protein_coding CG8478-S2-modencode_R1_peak_1468 chrX 12543370 12544327 + 20 NA intron (FBgn0030412, intron 14 of 22) protein_coding-intron (FBgn0030412, intron 14 of 22) -3968 FBgn0015024 FBgn0015024 FBtr0073682 CkIalpha protein_coding CG8478-S2-modencode_R1_peak_684 chr3L 9403324 9403757 + 20 NA promoter-TSS (FBgn0035987) protein_coding-promoter-TSS (FBgn0035987) 392 FBgn0035986 FBgn0035986 FBtr0076486 CG4022 protein_coding CG8478-S2-modencode_R1_peak_354 chr2R 7519576 7519666 + 20 NA exon (FBgn0033638, exon 1 of 8) protein_coding-exon (FBgn0033638, exon 1 of 8) 8797 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding CG8478-S2-modencode_R1_peak_1139 chr3R 22055238 22055392 + 20 NA promoter-TSS (FBgn0039419) protein_coding-promoter-TSS (FBgn0039419) -659 FBgn0039419 FBgn0039419 FBtr0084990 CG12290 protein_coding CG8478-S2-modencode_R1_peak_1366 chrX 7589853 7591350 + 20 NA exon (FBgn0029504, exon 1 of 6) protein_coding-exon (FBgn0029504, exon 1 of 6) -1650 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding CG8478-S2-modencode_R1_peak_1392 chrX 8799802 8800059 + 20 NA promoter-TSS (FBgn0011586) protein_coding-promoter-TSS (FBgn0011586) 93 FBgn0011586 FBgn0011586 FBtr0071266 e(r) protein_coding CG8478-S2-modencode_R1_peak_557 chr2R 19545297 19545419 + 20 NA exon (FBgn0034886, exon 1 of 19) protein_coding-exon (FBgn0034886, exon 1 of 19) 264 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding CG8478-S2-modencode_R1_peak_820 chr3L 22938333 22938489 + 19 NA promoter-TSS (FBgn0037207) protein_coding-promoter-TSS (FBgn0037207) -684 FBgn0037207 FBgn0037207 FBtr0078563 Mes2 protein_coding CG8478-S2-modencode_R1_peak_607 chr3L 2192211 2192540 + 19 NA promoter-TSS (FBgn0026593) protein_coding-promoter-TSS (FBgn0026593) -154 FBgn0026593 FBgn0026593 FBtr0308230 CG5707 protein_coding CG8478-S2-modencode_R1_peak_85 chr2L 8423370 8423547 + 19 NA intron (FBgn0027932, intron 1 of 4) protein_coding-intron (FBgn0027932, intron 1 of 5) 7768 FBgn0027932 FBgn0027932 FBtr0079666 Akap200 protein_coding CG8478-S2-modencode_R1_peak_44 chr2L 4333211 4333433 + 19 NA promoter-TSS (FBgn0020762) protein_coding-promoter-TSS (FBgn0020762) -604 FBgn0020762 FBgn0020762 FBtr0112898 Atet protein_coding CG8478-S2-modencode_R1_peak_1042 chr3R 16604139 16604577 + 19 NA intron (FBgn0038826, intron 2 of 11) protein_coding-intron (FBgn0038826, intron 2 of 11) -6035 FBgn0046689 FBgn0046689 FBtr0083996 Takl1 protein_coding CG8478-S2-modencode_R1_peak_1416 chrX 9552040 9552610 + 19 NA TTS (FBgn0030148) protein_coding-TTS (FBgn0030148) 4466 FBgn0030148 FBgn0030148 FBtr0071403 CG3106 protein_coding CG8478-S2-modencode_R1_peak_504 chr2R 15355426 15355746 + 19 NA TTS (FBgn0260934) protein_coding-TTS (FBgn0260934) 11886 FBgn0002716 FBgn0002716 FBtr0086461 mei-W68 protein_coding CG8478-S2-modencode_R1_peak_1078 chr3R 19141003 19141352 + 19 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) -25266 FBgn0039071 FBgn0039071 FBtr0084382 CG4434 protein_coding CG8478-S2-modencode_R1_peak_151 chr2L 16534190 16534445 + 19 NA Intergenic Intergenic -5395 FBgn0086038 FBgn0086038 FBtr0114314 snoRNA:Me28S-C1237 snoRNA CG8478-S2-modencode_R1_peak_994 chr3R 12106794 12107082 + 19 NA intron (FBgn0250823, intron 1 of 11) protein_coding-intron (FBgn0250823, intron 2 of 11) 8762 FBgn0250823 FBgn0250823 FBtr0100332 gish protein_coding CG8478-S2-modencode_R1_peak_1570 chrX 21239189 21239776 + 19 NA promoter-TSS (FBgn0024251) protein_coding-intron (FBgn0024251, intron 1 of 3) -159 FBgn0024251 FBgn0024251 FBtr0331744 bbx protein_coding CG8478-S2-modencode_R1_peak_174 chr2L 20174987 20175251 + 19 NA Intergenic Intergenic -40196 FBgn0032853 FBgn0032853 FBtr0081378 CG10651 protein_coding CG8478-S2-modencode_R1_peak_1147 chr3R 22814083 22814349 + 19 NA promoter-TSS (FBgn0051075) protein_coding-promoter-TSS (FBgn0051075) -843 FBgn0051075 FBgn0051075 FBtr0307506 CG31075 protein_coding CG8478-S2-modencode_R1_peak_601 chr3L 1349946 1350107 + 19 NA promoter-TSS (FBgn0003138) protein_coding-promoter-TSS (FBgn0003138) -1090 FBgn0029514 FBgn0029514 FBtr0310160 CG9166 protein_coding CG8478-S2-modencode_R1_peak_1446 chrX 10427268 10428081 + 19 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 32950 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_1110 chr3R 20390895 20391080 + 19 NA intron (FBgn0039209, intron 1 of 3) protein_coding-intron (FBgn0039209, intron 2 of 4) 8050 FBgn0004190 FBgn0004190 FBtr0084652 snRNA:U6:96Ac snRNA CG8478-S2-modencode_R1_peak_1466 chrX 12534957 12535198 + 19 NA intron (FBgn0030412, intron 14 of 23) protein_coding-intron (FBgn0030412, intron 13 of 22) 4648 FBgn0262187 FBgn0262187 FBtr0304204 mir-970 pre_miRNA CG8478-S2-modencode_R1_peak_813 chr3L 21762433 21762790 + 19 NA promoter-TSS (FBgn0037133) protein_coding-promoter-TSS (FBgn0037133) -304 FBgn0037133 FBgn0037133 FBtr0078436 CG7370 protein_coding CG8478-S2-modencode_R1_peak_159 chr2L 18576381 18576469 + 19 NA Intergenic Intergenic -4777 FBgn0085370 FBgn0085370 FBtr0303162 Pde11 protein_coding CG8478-S2-modencode_R1_peak_1502 chrX 14916916 14917122 + 19 NA intron (FBgn0030600, intron 13 of 22) protein_coding-intron (FBgn0030600, intron 13 of 22) -1448 FBgn0052594 FBgn0052594 FBtr0310270 be protein_coding CG8478-S2-modencode_R1_peak_432 chr2R 12743686 12744265 + 19 NA promoter-TSS (FBgn0026533) protein_coding-promoter-TSS (FBgn0026533) 249 FBgn0026533 FBgn0026533 FBtr0100437 Dek protein_coding CG8478-S2-modencode_R1_peak_726 chr3L 14048946 14049227 + 19 NA intron (FBgn0052138, intron 1 of 9) protein_coding-intron (FBgn0052138, intron 1 of 8) 2290 FBgn0052138 FBgn0052138 FBtr0334053 CG32138 protein_coding CG8478-S2-modencode_R1_peak_1365 chrX 7589288 7589614 + 19 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) -500 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding CG8478-S2-modencode_R1_peak_650 chr3L 5270359 5270942 + 19 NA intron (FBgn0052423, intron 1 of 11) protein_coding-intron (FBgn0052423, intron 1 of 10) 43067 FBgn0035598 FBgn0035598 FBtr0077171 CG4669 protein_coding CG8478-S2-modencode_R1_peak_459 chr2R 14194226 14194329 + 19 NA intron (FBgn0010575, intron 1 of 10) protein_coding-intron (FBgn0010575, intron 1 of 11) -2795 FBgn0034327 FBgn0034327 FBtr0307186 CG14505 protein_coding CG8478-S2-modencode_R1_peak_1039 chr3R 16079587 16079914 + 19 NA intron (FBgn0262582, intron 2 of 18) protein_coding-intron (FBgn0262582, intron 2 of 18) -39237 FBgn0262582 FBgn0262582 FBtr0305031 cic protein_coding CG8478-S2-modencode_R1_peak_1330 chrX 4578452 4578693 + 19 NA intron (FBgn0022768, intron 1 of 2) protein_coding-intron (FBgn0022768, intron 1 of 2) 2332 FBgn0022768 FBgn0022768 FBtr0070685 Pp2C1 protein_coding CG8478-S2-modencode_R1_peak_1064 chr3R 17721455 17721639 + 19 NA intron (FBgn0038917, intron 4 of 4) protein_coding-intron (FBgn0038917, intron 4 of 4) 6286 FBgn0264426 FBgn0264426 FBtr0332545 CR43844 ncRNA CG8478-S2-modencode_R1_peak_1389 chrX 8699981 8700110 + 19 NA promoter-TSS (FBgn0026411) protein_coding-promoter-TSS (FBgn0026411) -20659 FBgn0026411 FBgn0026411 FBtr0071279 Lim1 protein_coding CG8478-S2-modencode_R1_peak_1393 chrX 9046400 9046488 + 19 NA TTS (FBgn0030093) protein_coding-TTS (FBgn0030093) 3102 FBgn0030093 FBgn0030093 FBtr0071300 dalao protein_coding CG8478-S2-modencode_R1_peak_793 chr3L 18807857 18808020 + 19 NA intron (FBgn0036814, intron 2 of 5) protein_coding-intron (FBgn0036814, intron 2 of 5) 5837 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_1066 chr3R 18194159 18194352 + 19 NA promoter-TSS (FBgn0003178) protein_coding-promoter-TSS (FBgn0003178) -675 FBgn0003178 FBgn0003178 FBtr0084214 PyK protein_coding CG8478-S2-modencode_R1_peak_37 chr2L 2908870 2908958 + 19 NA intron (FBgn0041111, intron 2 of 10) protein_coding-intron (FBgn0041111, intron 2 of 10) 22985 FBgn0041111 FBgn0041111 FBtr0290038 lilli protein_coding CG8478-S2-modencode_R1_peak_658 chr3L 6957211 6957546 + 19 NA TTS (FBgn0035724) protein_coding-TTS (FBgn0035724) 480 FBgn0261445 FBgn0261445 FBtr0076938 sgl protein_coding CG8478-S2-modencode_R1_peak_1541 chrX 19055119 19055274 + 19 NA intron (FBgn0261461, intron 2 of 5) protein_coding-intron (FBgn0261461, intron 1 of 4) 8059 FBgn0263571 FBgn0263571 FBtr0309726 mir-4959 pre_miRNA CG8478-S2-modencode_R1_peak_585 chr3L 633177 633766 + 19 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 4570 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA CG8478-S2-modencode_R1_peak_420 chr2R 12048867 12049225 + 19 NA intron (FBgn0034083, intron 1 of 8) protein_coding-intron (FBgn0034083, intron 1 of 8) -2747 FBgn0034082 FBgn0034082 FBtr0087250 CG10734 protein_coding CG8478-S2-modencode_R1_peak_594 chr3L 646774 647542 + 19 NA Intergenic Intergenic -1616 FBgn0035147 FBgn0035147 FBtr0306917 Gale protein_coding CG8478-S2-modencode_R1_peak_1334 chrX 4977655 4978427 + 19 NA promoter-TSS (FBgn0052767) protein_coding-promoter-TSS (FBgn0052767) -983 FBgn0052767 FBgn0052767 FBtr0300994 CG32767 protein_coding CG8478-S2-modencode_R1_peak_45 chr2L 4371724 4372158 + 19 NA promoter-TSS (FBgn0026319) protein_coding-promoter-TSS (FBgn0026319) -6599 FBgn0026319 FBgn0026319 FBtr0290244 Traf4 protein_coding CG8478-S2-modencode_R1_peak_849 chr3R 2567483 2567836 + 19 NA exon (FBgn0051481, exon 1 of 9) protein_coding-exon (FBgn0051481, exon 1 of 9) 126 FBgn0051481 FBgn0051481 FBtr0089279 pb protein_coding CG8478-S2-modencode_R1_peak_1303 chrX 3637434 3637589 + 19 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -23846 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_1160 chr3R 25040575 25040836 + 19 NA promoter-TSS (FBgn0262448) pre_miRNA-promoter-TSS (FBgn0262448) 421 FBgn0051044 FBgn0051044 FBtr0303427 CR31044 ncRNA CG8478-S2-modencode_R1_peak_1171 chr3R 25959913 25960250 + 19 NA promoter-TSS (FBgn0086355) protein_coding-promoter-TSS (FBgn0086355) -84 FBgn0086355 FBgn0086355 FBtr0085584 Tpi protein_coding CG8478-S2-modencode_R1_peak_5 chr2L 247508 247878 + 19 NA intron (FBgn0086902, intron 1 of 16) protein_coding-intron (FBgn0086902, intron 1 of 17) 3130 FBgn0086902 FBgn0086902 FBtr0078145 kis protein_coding CG8478-S2-modencode_R1_peak_909 chr3R 5634445 5634958 + 19 NA exon (FBgn0037760, exon 1 of 4) protein_coding-exon (FBgn0037760, exon 1 of 4) 384 FBgn0037760 FBgn0037760 FBtr0082155 FBX011 protein_coding CG8478-S2-modencode_R1_peak_1235 chrU 5507306 5507691 + 19 NA NA NA NA NA CG8478-S2-modencode_R1_peak_109 chr2L 11806195 11807158 + 19 NA intron (FBgn0020309, intron 1 of 7) protein_coding-intron (FBgn0020309, intron 1 of 7) 2296 FBgn0020309 FBgn0020309 FBtr0305262 crol protein_coding CG8478-S2-modencode_R1_peak_288 chr2R 6418066 6418227 + 19 NA intron (FBgn0005630, intron 5 of 6) protein_coding-intron (FBgn0005630, intron 5 of 5) 4437 FBgn0005630 FBgn0005630 FBtr0089362 lola protein_coding CG8478-S2-modencode_R1_peak_1278 chrX 3080298 3080462 + 19 NA intron (FBgn0000479, intron 1 of 14) protein_coding-intron (FBgn0000479, intron 1 of 14) 9907 FBgn0000479 FBgn0000479 FBtr0070522 dnc protein_coding CG8478-S2-modencode_R1_peak_905 chr3R 5385662 5385863 + 19 NA promoter-TSS (FBgn0024833) protein_coding-promoter-TSS (FBgn0024833) 275 FBgn0027950 FBgn0027950 FBtr0082069 MBD-like protein_coding CG8478-S2-modencode_R1_peak_713 chr3L 11825530 11825939 + 19 NA promoter-TSS (FBgn0000404) protein_coding-promoter-TSS (FBgn0000404) 944 FBgn0000404 FBgn0000404 FBtr0076076 CycA protein_coding CG8478-S2-modencode_R1_peak_162 chr2L 18796062 18796397 + 19 NA Intergenic Intergenic 9118 FBgn0264362 FBgn0264362 FBtr0332209 CG43814 protein_coding CG8478-S2-modencode_R1_peak_619 chr3L 3071782 3071978 + 19 NA promoter-TSS (FBgn0035397) protein_coding-promoter-TSS (FBgn0035397) -1041 FBgn0052486 FBgn0052486 FBtr0073004 CG32486 protein_coding CG8478-S2-modencode_R1_peak_665 chr3L 7802271 7802835 + 19 NA exon (FBgn0052369, exon 1 of 7) protein_coding-exon (FBgn0052369, exon 1 of 7) 372 FBgn0052369 FBgn0052369 FBtr0076783 CG32369 protein_coding CG8478-S2-modencode_R1_peak_417 chr2R 12037821 12038485 + 19 NA exon (FBgn0034083, exon 1 of 9) protein_coding-exon (FBgn0034083, exon 1 of 9) 525 FBgn0034083 FBgn0034083 FBtr0302084 lbk protein_coding CG8478-S2-modencode_R1_peak_131 chr2L 13550248 13550336 + 19 NA promoter-TSS (FBgn0023407) protein_coding-promoter-TSS (FBgn0023407) 128 FBgn0259984 FBgn0259984 FBtr0301412 kuz protein_coding CG8478-S2-modencode_R1_peak_177 chr2L 20822880 20823005 + 19 NA Intergenic Intergenic -1494 FBgn0032889 FBgn0032889 FBtr0081418 CG9331 protein_coding CG8478-S2-modencode_R1_peak_1247 chrUextra 18119506 18119678 + 19 NA NA NA NA NA CG8478-S2-modencode_R1_peak_863 chr3R 3317978 3318215 + 19 NA promoter-TSS (FBgn0015569) protein_coding-promoter-TSS (FBgn0015569) 897 FBgn0261508 FBgn0261508 FBtr0302437 CG42656 protein_coding CG8478-S2-modencode_R1_peak_1083 chr3R 19158718 19159310 + 19 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 12870 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_430 chr2R 12718881 12718969 + 19 NA promoter-TSS (FBgn0262432) pre_miRNA-promoter-TSS (FBgn0262432) -64 FBgn0262432 FBgn0262432 FBtr0304405 mir-8 pre_miRNA CG8478-S2-modencode_R1_peak_364 chr2R 8340771 8340906 + 19 NA TTS (FBgn0033739) protein_coding-TTS (FBgn0033739) 142 FBgn0010238 FBgn0010238 FBtr0087933 Lac protein_coding CG8478-S2-modencode_R1_peak_274 chr2R 5988245 5988702 + 19 NA promoter-TSS (FBgn0004907) protein_coding-promoter-TSS (FBgn0004907) -1382 FBgn0033485 FBgn0033485 FBtr0088425 RpLP0-like protein_coding CG8478-S2-modencode_R1_peak_439 chr2R 13149306 13149465 + 19 NA promoter-TSS (FBgn0261642) protein_coding-promoter-TSS (FBgn0261642) -459 FBgn0261642 FBgn0261642 FBtr0086993 mbl protein_coding CG8478-S2-modencode_R1_peak_154 chr2L 16612222 16612323 + 19 NA intron (FBgn0259735, intron 2 of 5) protein_coding-intron (FBgn0259735, intron 2 of 4) 4849 FBgn0032590 FBgn0032590 FBtr0080871 CG4631 protein_coding CG8478-S2-modencode_R1_peak_228 chr2R 2519972 2520495 + 19 NA promoter-TSS (FBgn0262736) protein_coding-promoter-TSS (FBgn0262736) -347 FBgn0262736 FBgn0262736 FBtr0086153 Vha16-1 protein_coding CG8478-S2-modencode_R1_peak_1564 chrX 20931805 20931931 + 19 NA exon (FBgn0031150, exon 2 of 7) protein_coding-exon (FBgn0031150, exon 2 of 7) 3747 FBgn0052512 FBgn0052512 FBtr0332847 CG32512 protein_coding CG8478-S2-modencode_R1_peak_1533 chrX 18260176 18260450 + 18 NA promoter-TSS (FBgn0014467) protein_coding-promoter-TSS (FBgn0014467) -420 FBgn0014467 FBgn0014467 FBtr0300205 CrebB-17A protein_coding CG8478-S2-modencode_R1_peak_1451 chrX 10678674 10679039 + 18 NA promoter-TSS (FBgn0003360) protein_coding-promoter-TSS (FBgn0003360) -365 FBgn0003360 FBgn0003360 FBtr0073423 sesB protein_coding CG8478-S2-modencode_R1_peak_1092 chr3R 19427320 19427584 + 18 NA promoter-TSS (FBgn0051143) tRNA-promoter-TSS (FBgn0051143) -275 FBgn0051143 FBgn0051143 FBtr0084482 tRNA:CR31143 tRNA CG8478-S2-modencode_R1_peak_1251 chrX 530019 530273 + 18 NA promoter-TSS (FBgn0020381) protein_coding-promoter-TSS (FBgn0020381) 226 FBgn0003575 FBgn0003575 FBtr0070120 su(s) protein_coding CG8478-S2-modencode_R1_peak_371 chr2R 8803645 8803904 + 18 NA intron (FBgn0010488, intron 1 of 3) protein_coding-intron (FBgn0010488, intron 1 of 3) 272 FBgn0010488 FBgn0010488 FBtr0087787 NAT1 protein_coding CG8478-S2-modencode_R1_peak_1427 chrX 9770320 9770547 + 18 NA exon (FBgn0030156, exon 1 of 2) protein_coding-exon (FBgn0030156, exon 1 of 2) 272 FBgn0030156 FBgn0030156 FBtr0071397 CG15247 protein_coding CG8478-S2-modencode_R1_peak_1325 chrX 4255755 4255880 + 18 NA intron (FBgn0262738, intron 15 of 15) protein_coding-intron (FBgn0262738, intron 14 of 14) 4099 FBgn0262339 FBgn0262339 FBtr0304529 mir-982 pre_miRNA CG8478-S2-modencode_R1_peak_378 chr2R 8926427 8926613 + 18 NA Intergenic Intergenic 8273 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding CG8478-S2-modencode_R1_peak_620 chr3L 3193004 3193170 + 18 NA promoter-TSS (FBgn0001233) protein_coding-promoter-TSS (FBgn0001233) 118 FBgn0001233 FBgn0001233 FBtr0073040 Hsp83 protein_coding CG8478-S2-modencode_R1_peak_551 chr2R 18588083 18588328 + 18 NA promoter-TSS (FBgn0005631) protein_coding-promoter-TSS (FBgn0005631) -352 FBgn0005631 FBgn0005631 FBtr0071923 robo protein_coding CG8478-S2-modencode_R1_peak_1552 chrX 19778245 19778379 + 18 NA intron (FBgn0052529, intron 1 of 6) protein_coding-intron (FBgn0052529, intron 4 of 8) 5781 FBgn0086782 FBgn0086782 FBtr0074802 amn protein_coding CG8478-S2-modencode_R1_peak_1155 chr3R 24498107 24498250 + 18 NA TTS (FBgn0039593) protein_coding-TTS (FBgn0039593) 1720 FBgn0039593 FBgn0039593 FBtr0085307 CG9989 protein_coding CG8478-S2-modencode_R1_peak_185 chr2L 21560284 21560415 + 18 NA Intergenic Intergenic -13040 FBgn0032949 FBgn0032949 FBtr0085896 Lamp1 protein_coding CG8478-S2-modencode_R1_peak_448 chr2R 13604000 13605130 + 18 NA promoter-TSS (FBgn0028494) protein_coding-promoter-TSS (FBgn0028494) -5279 FBgn0034263 FBgn0034263 FBtr0086859 CG10934 protein_coding CG8478-S2-modencode_R1_peak_952 chr3R 9473638 9473853 + 18 NA promoter-TSS (FBgn0015778) protein_coding-promoter-TSS (FBgn0015778) -794 FBgn0015778 FBgn0015778 FBtr0082800 rin protein_coding CG8478-S2-modencode_R1_peak_1299 chrX 3614362 3614571 + 18 NA promoter-TSS (FBgn0015286) protein_coding-promoter-TSS (FBgn0015286) -801 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_21 chr2L 1656640 1657109 + 18 NA intron (FBgn0086758, intron 2 of 6) protein_coding-intron (FBgn0086758, intron 2 of 6) 5616 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_941 chr3R 8542423 8542545 + 18 NA intron (FBgn0002719, intron 1 of 2) protein_coding-intron (FBgn0002719, intron 2 of 3) 3030 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_860 chr3R 2948352 2949007 + 18 NA intron (FBgn0261238, intron 1 of 9) protein_coding-intron (FBgn0261238, intron 1 of 9) -1593 FBgn0037472 FBgn0037472 FBtr0081563 CG10098 protein_coding CG8478-S2-modencode_R1_peak_1383 chrX 8454829 8455072 + 18 NA promoter-TSS (FBgn0030049) protein_coding-promoter-TSS (FBgn0030049) 22 FBgn0030049 FBgn0030049 FBtr0331723 Trf4-1 protein_coding CG8478-S2-modencode_R1_peak_583 chr3L 629020 630143 + 18 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 1111 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_41 chr2L 3803765 3804004 + 18 NA intron (FBgn0021800, intron 1 of 3) protein_coding-intron (FBgn0021800, intron 1 of 3) -1815 FBgn0021800 FBgn0021800 FBtr0077498 l(2)k16918 protein_coding CG8478-S2-modencode_R1_peak_1023 chr3R 13544886 13545168 + 18 NA promoter-TSS (FBgn0261987) protein_coding-promoter-TSS (FBgn0261987) -147 FBgn0261987 FBgn0261987 FBtr0083508 Pxt protein_coding CG8478-S2-modencode_R1_peak_1084 chr3R 19160544 19160946 + 18 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 11139 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_172 chr2L 19865814 19865902 + 18 NA promoter-TSS (FBgn0263873) protein_coding-promoter-TSS (FBgn0263873) 9757 FBgn0263873 FBgn0263873 FBtr0329844 sick protein_coding CG8478-S2-modencode_R1_peak_187 chr2L 21828191 21828472 + 18 NA promoter-TSS (FBgn0003866) protein_coding-promoter-TSS (FBgn0003866) -262 FBgn0003866 FBgn0003866 FBtr0085906 tsh protein_coding CG8478-S2-modencode_R1_peak_1475 chrX 12618551 12618657 + 18 NA intron (FBgn0264678, intron 1 of 1) protein_coding-intron (FBgn0263865, intron 2 of 9) -6111 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA CG8478-S2-modencode_R1_peak_861 chr3R 2949539 2949815 + 18 NA promoter-TSS (FBgn0037472) protein_coding-promoter-TSS (FBgn0037472) -595 FBgn0037472 FBgn0037472 FBtr0081563 CG10098 protein_coding CG8478-S2-modencode_R1_peak_1346 chrX 6267088 6267245 + 18 NA promoter-TSS (FBgn0003139) protein_coding-promoter-TSS (FBgn0003139) -218 FBgn0003139 FBgn0003139 FBtr0331432 PpV protein_coding CG8478-S2-modencode_R1_peak_268 chr2R 5751229 5751325 + 18 NA promoter-TSS (FBgn0050010) protein_coding-promoter-TSS (FBgn0050010) 121 FBgn0050010 FBgn0050010 FBtr0088374 CG30010 protein_coding CG8478-S2-modencode_R1_peak_737 chr3L 15524873 15525502 + 18 NA promoter-TSS (FBgn0262893) protein_coding-promoter-TSS (FBgn0262893) -614 FBgn0262893 FBgn0262893 FBtr0306309 CG43248 protein_coding CG8478-S2-modencode_R1_peak_146 chr2L 16325084 16325556 + 18 NA exon (FBgn0000250, exon 1 of 6) protein_coding-exon (FBgn0000250, exon 1 of 6) 123 FBgn0000250 FBgn0000250 FBtr0080846 cact protein_coding CG8478-S2-modencode_R1_peak_1537 chrX 19043586 19043779 + 18 NA intron (FBgn0261461, intron 2 of 5) protein_coding-intron (FBgn0261461, intron 1 of 4) -2905 FBgn0261461 FBgn0261461 FBtr0299625 RhoGAP18B protein_coding CG8478-S2-modencode_R1_peak_896 chr3R 5178022 5179001 + 18 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) -1479 FBgn0086053 FBgn0086053 FBtr0114329 snoRNA:Me18S-G1358a snoRNA CG8478-S2-modencode_R1_peak_515 chr2R 16719212 16719567 + 18 NA exon (FBgn0016984, exon 1 of 2) protein_coding-exon (FBgn0016984, exon 1 of 2) 530 FBgn0016984 FBgn0016984 FBtr0071563 sktl protein_coding CG8478-S2-modencode_R1_peak_320 chr2R 6978234 6978492 + 18 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -4219 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_498 chr2R 15304244 15304463 + 18 NA intron (FBgn0263391, intron 1 of 11) protein_coding-intron (FBgn0263391, intron 3 of 11) 1577 FBgn0050326 FBgn0050326 FBtr0086528 tRNA:CR30326 tRNA CG8478-S2-modencode_R1_peak_253 chr2R 4019202 4019526 + 18 NA promoter-TSS (FBgn0260398) protein_coding-promoter-TSS (FBgn0260398) 426 FBgn0005648 FBgn0005648 FBtr0088786 Pabp2 protein_coding CG8478-S2-modencode_R1_peak_912 chr3R 5904988 5905216 + 18 NA Intergenic Intergenic -4007 FBgn0037786 FBgn0037786 FBtr0309853 CG5361 protein_coding CG8478-S2-modencode_R1_peak_264 chr2R 5442217 5443024 + 18 NA Intergenic Intergenic 1313 FBgn0262447 FBgn0262447 FBtr0304459 mir-14 pre_miRNA CG8478-S2-modencode_R1_peak_260 chr2R 5052686 5052774 + 18 NA promoter-TSS (FBgn0033388) protein_coding-promoter-TSS (FBgn0033388) -275 FBgn0033388 FBgn0033388 FBtr0088621 CG8046 protein_coding CG8478-S2-modencode_R1_peak_1302 chrX 3636316 3637169 + 18 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -23077 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_1099 chr3R 19872399 19872682 + 18 NA promoter-TSS (FBgn0043455) protein_coding-promoter-TSS (FBgn0043455) 903 FBgn0005649 FBgn0005649 FBtr0333200 Rox8 protein_coding CG8478-S2-modencode_R1_peak_1545 chrX 19390011 19390334 + 18 NA promoter-TSS (FBgn0027621) protein_coding-promoter-TSS (FBgn0027621) -1147 FBgn0040890 FBgn0040890 FBtr0300214 ksh protein_coding CG8478-S2-modencode_R1_peak_1401 chrX 9388081 9388445 + 18 NA intron (FBgn0261260, intron 1 of 2) protein_coding-intron (FBgn0261260, intron 1 of 14) 1958 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_1534 chrX 18265108 18265712 + 18 NA promoter-TSS (FBgn0014467) protein_coding-promoter-TSS (FBgn0014467) -1259 FBgn0263769 FBgn0263769 FBtr0310488 CR43686 ncRNA CG8478-S2-modencode_R1_peak_988 chr3R 12035964 12036168 + 18 NA Intergenic Intergenic -5093 FBgn0010438 FBgn0010438 FBtr0083277 mtSSB protein_coding CG8478-S2-modencode_R1_peak_962 chr3R 10515577 10516013 + 18 NA intron (FBgn0051314, intron 1 of 6) protein_coding-intron (FBgn0051314, intron 1 of 7) 7262 FBgn0051314 FBgn0051314 FBtr0301499 Neu3 protein_coding CG8478-S2-modencode_R1_peak_692 chr3L 10347888 10348111 + 18 NA Intergenic Intergenic -10382 FBgn0262439 FBgn0262439 FBtr0304433 mir-276a pre_miRNA CG8478-S2-modencode_R1_peak_843 chr3R 2208996 2209169 + 18 NA promoter-TSS (FBgn0037442) protein_coding-promoter-TSS (FBgn0037442) 449 FBgn0037442 FBgn0037442 FBtr0081722 CG10277 protein_coding CG8478-S2-modencode_R1_peak_852 chr3R 2675724 2675837 + 18 NA promoter-TSS (FBgn0003339) protein_coding-promoter-TSS (FBgn0003339) -77 FBgn0003339 FBgn0003339 FBtr0081657 Scr protein_coding CG8478-S2-modencode_R1_peak_810 chr3L 21278996 21279115 + 18 NA promoter-TSS (FBgn0259785) protein_coding-promoter-TSS (FBgn0259785) -144 FBgn0259785 FBgn0259785 FBtr0331793 pzg protein_coding CG8478-S2-modencode_R1_peak_848 chr3R 2508969 2509298 + 18 NA Intergenic Intergenic -1039 FBgn0000552 FBgn0000552 FBtr0081688 Edg84A protein_coding CG8478-S2-modencode_R1_peak_1430 chrX 10159695 10160164 + 18 NA promoter-TSS (FBgn0040942) protein_coding-promoter-TSS (FBgn0040942) -633 FBgn0040942 FBgn0040942 FBtr0071481 CG12643 protein_coding CG8478-S2-modencode_R1_peak_1013 chr3R 12942582 12942680 + 18 NA intron (FBgn0014141, intron 3 of 17) protein_coding-intron (FBgn0014141, intron 2 of 15) -3570 FBgn0085307 FBgn0085307 FBtr0112473 CG34278 protein_coding CG8478-S2-modencode_R1_peak_535 chr2R 17596666 17597108 + 18 NA TTS (FBgn0050403) protein_coding-TTS (FBgn0050403) 2227 FBgn0050403 FBgn0050403 FBtr0114523 CG30403 protein_coding CG8478-S2-modencode_R1_peak_1411 chrX 9478480 9478605 + 18 NA Intergenic Intergenic -1381 FBgn0001186 FBgn0001186 FBtr0071362 Hex-A protein_coding CG8478-S2-modencode_R1_peak_701 chr3L 10843347 10843436 + 18 NA Intergenic Intergenic -8113 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_1098 chr3R 19857143 19857237 + 18 NA promoter-TSS (FBgn0020647) protein_coding-promoter-TSS (FBgn0020647) -724 FBgn0039139 FBgn0039139 FBtr0084532 Ime4 protein_coding CG8478-S2-modencode_R1_peak_482 chr2R 14561613 14561718 + 18 NA promoter-TSS (FBgn0023214) protein_coding-promoter-TSS (FBgn0023214) -628 FBgn0023214 FBgn0023214 FBtr0086652 edl protein_coding CG8478-S2-modencode_R1_peak_774 chr3L 18009749 18009917 + 18 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -13655 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_1357 chrX 7194311 7194509 + 18 NA intron (FBgn0029941, intron 2 of 6) protein_coding-intron (FBgn0029941, intron 2 of 6) -7564 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding CG8478-S2-modencode_R1_peak_1377 chrX 7861296 7861560 + 18 NA intron (FBgn0003656, intron 1 of 10) protein_coding-intron (FBgn0003656, intron 1 of 10) 841 FBgn0003656 FBgn0003656 FBtr0071126 sws protein_coding CG8478-S2-modencode_R1_peak_240 chr2R 3503108 3503720 + 18 NA intron (FBgn0033196, intron 2 of 10) protein_coding-intron (FBgn0033196, intron 2 of 10) 4802 FBgn0033196 FBgn0033196 FBtr0088950 CG1358 protein_coding CG8478-S2-modencode_R1_peak_411 chr2R 10849571 10849858 + 18 NA intron (FBgn0261854, intron 1 of 9) protein_coding-intron (FBgn0261854, intron 1 of 9) -3471 FBgn0033987 FBgn0033987 FBtr0087411 ckn protein_coding CG8478-S2-modencode_R1_peak_1298 chrX 3612633 3612870 + 18 NA intron (FBgn0015286, intron 1 of 6) protein_coding-intron (FBgn0015286, intron 1 of 4) 914 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_410 chr2R 10678204 10678590 + 18 NA intron (FBgn0001319, intron 3 of 10) protein_coding-intron (FBgn0001319, intron 3 of 10) 6135 FBgn0001319 FBgn0001319 FBtr0329882 kn protein_coding CG8478-S2-modencode_R1_peak_122 chr2L 12527715 12528245 + 18 NA intron (FBgn0259176, intron 5 of 7) protein_coding-intron (FBgn0259176, intron 5 of 7) -15196 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA CG8478-S2-modencode_R1_peak_653 chr3L 5801003 5801125 + 18 NA exon (FBgn0015806, exon 2 of 10) protein_coding-exon (FBgn0015806, exon 2 of 10) 2967 FBgn0015806 FBgn0015806 FBtr0077114 S6k protein_coding CG8478-S2-modencode_R1_peak_129 chr2L 13514145 13514507 + 18 NA intron (FBgn0023407, intron 3 of 6) protein_coding-intron (FBgn0023407, intron 3 of 6) -13515 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding CG8478-S2-modencode_R1_peak_879 chr3R 4645594 4645842 + 18 NA promoter-TSS (FBgn0262604) protein_coding-promoter-TSS (FBgn0262604) 378 FBgn0262604 FBgn0262604 FBtr0305278 CG43130 protein_coding CG8478-S2-modencode_R1_peak_690 chr3L 9847824 9847946 + 18 NA exon (FBgn0004390, exon 1 of 5) protein_coding-exon (FBgn0004390, exon 1 of 5) 500 FBgn0004390 FBgn0004390 FBtr0330168 Gap1 protein_coding CG8478-S2-modencode_R1_peak_597 chr3L 685350 685789 + 18 NA promoter-TSS (FBgn0035153) protein_coding-promoter-TSS (FBgn0035153) -20 FBgn0035153 FBgn0035153 FBtr0072610 ebd1 protein_coding CG8478-S2-modencode_R1_peak_1100 chr3R 19873119 19873294 + 18 NA promoter-TSS (FBgn0043455) protein_coding-promoter-TSS (FBgn0043455) 237 FBgn0005649 FBgn0005649 FBtr0333200 Rox8 protein_coding CG8478-S2-modencode_R1_peak_4 chr2L 182907 183415 + 18 NA exon (FBgn0016977, exon 1 of 10) protein_coding-intron (FBgn0016977, intron 1 of 10) 341 FBgn0016977 FBgn0016977 FBtr0332337 spen protein_coding CG8478-S2-modencode_R1_peak_978 chr3R 11810441 11810853 + 18 NA Intergenic Intergenic -1276 FBgn0003507 FBgn0003507 FBtr0083216 srp protein_coding CG8478-S2-modencode_R1_peak_1474 chrX 12610029 12610177 + 17 NA intron (FBgn0263865, intron 3 of 10) protein_coding-intron (FBgn0263865, intron 2 of 9) 2390 FBgn0264678 FBgn0264678 FBtr0333775 CR43963 ncRNA CG8478-S2-modencode_R1_peak_1530 chrX 17545854 17546417 + 17 NA promoter-TSS (FBgn0026375) protein_coding-promoter-TSS (FBgn0026375) 460 FBgn0026375 FBgn0026375 FBtr0074481 RhoGAPp190 protein_coding CG8478-S2-modencode_R1_peak_80 chr2L 8100897 8100985 + 17 NA intron (FBgn0261822, intron 2 of 7) protein_coding-intron (FBgn0261822, intron 2 of 6) 12637 FBgn0261822 FBgn0261822 FBtr0079573 Bsg protein_coding CG8478-S2-modencode_R1_peak_1292 chrX 3337349 3337663 + 17 NA intron (FBgn0029657, intron 3 of 6) protein_coding-intron (FBgn0029657, intron 1 of 3) -3327 FBgn0029657 FBgn0029657 FBtr0332304 CG12535 protein_coding CG8478-S2-modencode_R1_peak_641 chr3L 4108491 4108777 + 17 NA exon (FBgn0028484, exon 1 of 3) protein_coding-exon (FBgn0028484, exon 1 of 3) 448 FBgn0028484 FBgn0028484 FBtr0073211 Ack protein_coding CG8478-S2-modencode_R1_peak_1126 chr3R 21831730 21832277 + 17 NA promoter-TSS (FBgn0002733) protein_coding-promoter-TSS (FBgn0002733) -258 FBgn0002733 FBgn0002733 FBtr0084982 HLHmbeta protein_coding CG8478-S2-modencode_R1_peak_68 chr2L 7424894 7425016 + 17 NA promoter-TSS (FBgn0262453) pre_miRNA-promoter-TSS (FBgn0262453) -898 FBgn0262453 FBgn0262453 FBtr0304473 mir-275 pre_miRNA CG8478-S2-modencode_R1_peak_1318 chrX 3679690 3679886 + 17 NA exon (FBgn0086899, exon 7 of 8) protein_coding-exon (FBgn0086899, exon 7 of 8) -4287 FBgn0029676 FBgn0029676 FBtr0333764 HIP-R protein_coding CG8478-S2-modencode_R1_peak_1200 chr3R 27550748 27552481 + 17 NA promoter-TSS (FBgn0003870) protein_coding-intron (FBgn0003870, intron 1 of 4) -510 FBgn0003870 FBgn0003870 FBtr0303228 ttk protein_coding CG8478-S2-modencode_R1_peak_190 chr2L 22148993 22149400 + 17 NA intron (FBgn0261802, intron 5 of 6) protein_coding-intron (FBgn0261802, intron 5 of 7) -2558 FBgn0083973 FBgn0083973 FBtr0303249 CG34137 protein_coding CG8478-S2-modencode_R1_peak_1207 chr4 522131 522261 + 17 NA promoter-TSS (FBgn0004607) protein_coding-promoter-TSS (FBgn0004607) -240 FBgn0004607 FBgn0004607 FBtr0332913 zfh2 protein_coding CG8478-S2-modencode_R1_peak_1289 chrX 3301820 3302312 + 17 NA intron (FBgn0029657, intron 3 of 4) protein_coding-intron (FBgn0029657, intron 2 of 3) 19490 FBgn0052493 FBgn0052493 FBtr0070533 tRNA:CR32493 tRNA CG8478-S2-modencode_R1_peak_609 chr3L 2418429 2419155 + 17 NA intron (FBgn0261551, intron 1 of 6) protein_coding-intron (FBgn0261551, intron 2 of 9) 837 FBgn0261551 FBgn0261551 FBtr0302675 CG42669 protein_coding CG8478-S2-modencode_R1_peak_327 chr2R 6983762 6984467 + 17 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -9970 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_1447 chrX 10428503 10428657 + 17 NA intron (FBgn0085443, intron 3 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) 32044 FBgn0030215 FBgn0030215 FBtr0310297 CG15296 protein_coding CG8478-S2-modencode_R1_peak_1321 chrX 3844197 3844490 + 17 NA intron (FBgn0029687, intron 1 of 5) protein_coding-intron (FBgn0029687, intron 2 of 6) 1334 FBgn0029687 FBgn0029687 FBtr0070618 Vap-33-1 protein_coding CG8478-S2-modencode_R1_peak_1137 chr3R 21963124 21963298 + 17 NA TTS (FBgn0039415) protein_coding-TTS (FBgn0039415) 4335 FBgn0039415 FBgn0039415 FBtr0084987 CG6142 protein_coding CG8478-S2-modencode_R1_peak_496 chr2R 15277549 15277684 + 17 NA promoter-TSS (FBgn0034442) protein_coding-promoter-TSS (FBgn0034442) -17 FBgn0034442 FBgn0034442 FBtr0086525 CG11257 protein_coding CG8478-S2-modencode_R1_peak_395 chr2R 9888367 9888474 + 17 NA intron (FBgn0002643, intron 2 of 6) protein_coding-intron (FBgn0002643, intron 2 of 6) 5066 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA CG8478-S2-modencode_R1_peak_1234 chrU 5300438 5300553 + 17 NA NA NA NA NA CG8478-S2-modencode_R1_peak_231 chr2R 2880119 2880461 + 17 NA promoter-TSS (FBgn0050159) protein_coding-promoter-TSS (FBgn0050159) 99 FBgn0050159 FBgn0050159 FBtr0089760 CG30159 protein_coding CG8478-S2-modencode_R1_peak_803 chr3L 19626276 19626776 + 17 NA promoter-TSS (FBgn0036896) protein_coding-promoter-TSS (FBgn0036896) -330 FBgn0036896 FBgn0036896 FBtr0302513 wnd protein_coding CG8478-S2-modencode_R1_peak_363 chr2R 8061247 8061357 + 17 NA promoter-TSS (FBgn0010621) protein_coding-promoter-TSS (FBgn0010621) -1299 FBgn0010621 FBgn0010621 FBtr0087988 Cct5 protein_coding CG8478-S2-modencode_R1_peak_1470 chrX 12554883 12555215 + 17 NA TTS (FBgn0053963) ncRNA-TTS (FBgn0053963) 1554 FBgn0053963 FBgn0053963 FBtr0100004 CR33963 ncRNA CG8478-S2-modencode_R1_peak_221 chr2R 2055779 2056763 + 17 NA promoter-TSS (FBgn0011956) tRNA-promoter-TSS (FBgn0011956) -841 FBgn0011956 FBgn0011956 FBtr0085985 tRNA:R2:42Ab tRNA CG8478-S2-modencode_R1_peak_1340 chrX 5774347 5774572 + 17 NA promoter-TSS (FBgn0029819) protein_coding-promoter-TSS (FBgn0029819) 568 FBgn0029820 FBgn0029820 FBtr0070821 CG16721 protein_coding CG8478-S2-modencode_R1_peak_1297 chrX 3589156 3589247 + 17 NA intron (FBgn0023215, intron 2 of 7) protein_coding-intron (FBgn0023215, intron 2 of 7) 5803 FBgn0023215 FBgn0023215 FBtr0301825 Mnt protein_coding CG8478-S2-modencode_R1_peak_447 chr2R 13568983 13569071 + 17 NA intron (FBgn0016059, intron 1 of 6) protein_coding-intron (FBgn0016059, intron 1 of 6) -2280 FBgn0016059 FBgn0016059 FBtr0302161 Sema-1b protein_coding CG8478-S2-modencode_R1_peak_266 chr2R 5464897 5465342 + 17 NA intron (FBgn0033426, intron 1 of 6) protein_coding-intron (FBgn0033426, intron 1 of 6) 1393 FBgn0085436 FBgn0085436 FBtr0302122 Not1 protein_coding CG8478-S2-modencode_R1_peak_1567 chrX 21152416 21152514 + 17 NA promoter-TSS (FBgn0052521) protein_coding-promoter-TSS (FBgn0052521) -285 FBgn0052521 FBgn0052521 FBtr0310654 CG32521 protein_coding CG8478-S2-modencode_R1_peak_542 chr2R 18205358 18205758 + 17 NA intron (FBgn0013272, intron 1 of 4) protein_coding-intron (FBgn0013272, intron 2 of 5) -4850 FBgn0013272 FBgn0013272 FBtr0071816 Gp150 protein_coding CG8478-S2-modencode_R1_peak_694 chr3L 10515607 10515743 + 17 NA intron (FBgn0052062, intron 2 of 13) protein_coding-intron (FBgn0052062, intron 2 of 14) 6572 FBgn0052062 FBgn0052062 FBtr0305094 A2bp1 protein_coding CG8478-S2-modencode_R1_peak_1069 chr3R 18452811 18453037 + 17 NA promoter-TSS (FBgn0020278) protein_coding-promoter-TSS (FBgn0020278) -1595 FBgn0263452 FBgn0263452 FBtr0309305 CR43475 ncRNA CG8478-S2-modencode_R1_peak_245 chr2R 3661282 3661370 + 17 NA intron (FBgn0050497, intron 2 of 2) protein_coding-intron (FBgn0050497, intron 2 of 2) 11385 FBgn0000337 FBgn0000337 FBtr0088931 cn protein_coding CG8478-S2-modencode_R1_peak_971 chr3R 11068660 11069522 + 17 NA promoter-TSS (FBgn0001219) protein_coding-promoter-TSS (FBgn0001219) -850 FBgn0001219 FBgn0001219 FBtr0083056 Hsc70-4 protein_coding CG8478-S2-modencode_R1_peak_640 chr3L 3787495 3787812 + 17 NA exon (FBgn0052264, exon 1 of 12) protein_coding-exon (FBgn0052264, exon 1 of 12) -3151 FBgn0052266 FBgn0052266 FBtr0073147 CG32266 protein_coding CG8478-S2-modencode_R1_peak_739 chr3L 15559489 15559665 + 17 NA TTS (FBgn0036510) protein_coding-TTS (FBgn0036510) 464 FBgn0036511 FBgn0036511 FBtr0332091 CG6498 protein_coding CG8478-S2-modencode_R1_peak_127 chr2L 13511270 13511692 + 17 NA intron (FBgn0023407, intron 4 of 6) protein_coding-intron (FBgn0023407, intron 4 of 6) -16360 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding CG8478-S2-modencode_R1_peak_1123 chr3R 21472823 21473298 + 17 NA promoter-TSS (FBgn0039350) protein_coding-promoter-TSS (FBgn0039350) 73 FBgn0039350 FBgn0039350 FBtr0113288 jigr1 protein_coding CG8478-S2-modencode_R1_peak_514 chr2R 16505457 16505587 + 17 NA promoter-TSS (FBgn0034527) protein_coding-promoter-TSS (FBgn0034527) 180 FBgn0050147 FBgn0050147 FBtr0086256 Hil protein_coding CG8478-S2-modencode_R1_peak_956 chr3R 9850528 9850850 + 17 NA intron (FBgn0264493, intron 1 of 8) protein_coding-intron (FBgn0264493, intron 1 of 8) 992 FBgn0264493 FBgn0264493 FBtr0301632 rdx protein_coding CG8478-S2-modencode_R1_peak_695 chr3L 10651562 10651682 + 17 NA intron (FBgn0052066, intron 1 of 3) protein_coding-intron (FBgn0052066, intron 2 of 4) 1459 FBgn0052066 FBgn0052066 FBtr0076277 CG32066 protein_coding CG8478-S2-modencode_R1_peak_544 chr2R 18441890 18441994 + 17 NA intron (FBgn0003175, intron 3 of 14) protein_coding-intron (FBgn0003175, intron 3 of 13) 4343 FBgn0034736 FBgn0034736 FBtr0071835 CG6018 protein_coding CG8478-S2-modencode_R1_peak_709 chr3L 11358191 11358895 + 17 NA promoter-TSS (FBgn0036155) protein_coding-promoter-TSS (FBgn0036155) -558 FBgn0036155 FBgn0036155 FBtr0333387 CG6163 protein_coding CG8478-S2-modencode_R1_peak_512 chr2R 16475496 16475688 + 17 NA promoter-TSS (FBgn0034523) protein_coding-promoter-TSS (FBgn0034523) 582 FBgn0015907 FBgn0015907 FBtr0086222 bl protein_coding CG8478-S2-modencode_R1_peak_517 chr2R 16801642 16801766 + 17 NA Intergenic Intergenic -2581 FBgn0020617 FBgn0020617 FBtr0071518 Rx protein_coding CG8478-S2-modencode_R1_peak_671 chr3L 8021764 8021922 + 17 NA promoter-TSS (FBgn0052370) tRNA-promoter-TSS (FBgn0052370) -125 FBgn0052370 FBgn0052370 FBtr0076762 tRNA:CR32370 tRNA CG8478-S2-modencode_R1_peak_180 chr2L 21042187 21042331 + 17 NA intron (FBgn0250867, intron 2 of 6) protein_coding-intron (FBgn0250867, intron 1 of 1) -10774 FBgn0010395 FBgn0010395 FBtr0081461 betaInt-nu protein_coding CG8478-S2-modencode_R1_peak_636 chr3L 3450113 3450415 + 17 NA intron (FBgn0026259, intron 4 of 8) protein_coding-intron (FBgn0026259, intron 4 of 8) 10713 FBgn0026259 FBgn0026259 FBtr0073144 eIF5B protein_coding CG8478-S2-modencode_R1_peak_1335 chrX 5412289 5412389 + 17 NA exon (FBgn0029771, exon 3 of 3) protein_coding-exon (FBgn0029771, exon 3 of 3) 1045 FBgn0029771 FBgn0029771 FBtr0070780 CG12730 protein_coding CG8478-S2-modencode_R1_peak_121 chr2L 12521088 12521329 + 17 NA intron (FBgn0259176, intron 5 of 7) protein_coding-intron (FBgn0259176, intron 5 of 7) 13100 FBgn0263458 FBgn0263458 FBtr0309757 snoRNA:CG43051-a snoRNA CG8478-S2-modencode_R1_peak_181 chr2L 21124024 21124112 + 17 NA intron (FBgn0040297, intron 12 of 20) protein_coding-intron (FBgn0040297, intron 12 of 19) 16109 FBgn0040297 FBgn0040297 FBtr0299911 Nhe2 protein_coding CG8478-S2-modencode_R1_peak_765 chr3L 17609991 17610224 + 17 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 2318 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding CG8478-S2-modencode_R1_peak_747 chr3L 16608544 16608649 + 17 NA promoter-TSS (FBgn0017572) protein_coding-promoter-TSS (FBgn0017572) -24 FBgn0017572 FBgn0017572 FBtr0331560 Mo25 protein_coding CG8478-S2-modencode_R1_peak_503 chr2R 15348652 15349247 + 17 NA intron (FBgn0260934, intron 2 of 15) protein_coding-intron (FBgn0260934, intron 2 of 15) 5249 FBgn0002716 FBgn0002716 FBtr0086461 mei-W68 protein_coding CG8478-S2-modencode_R1_peak_1135 chr3R 21934353 21934554 + 17 NA exon (FBgn0051324, exon 2 of 5) protein_coding-exon (FBgn0051324, exon 2 of 5) -10020 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_1173 chr3R 26106595 26107968 + 17 NA intron (FBgn0010113, intron 1 of 5) protein_coding-intron (FBgn0010113, intron 1 of 5) 3625 FBgn0010113 FBgn0010113 FBtr0085620 hdc protein_coding CG8478-S2-modencode_R1_peak_1494 chrX 13784648 13785459 + 17 NA intron (FBgn0263115, intron 3 of 7) protein_coding-intron (FBgn0263115, intron 2 of 4) -33896 FBgn0030532 FBgn0030532 FBtr0073829 CG11071 protein_coding CG8478-S2-modencode_R1_peak_414 chr2R 11748695 11749342 + 17 NA promoter-TSS (FBgn0022160) protein_coding-promoter-TSS (FBgn0022160) -169 FBgn0022160 FBgn0022160 FBtr0112900 Gpo-1 protein_coding CG8478-S2-modencode_R1_peak_1086 chr3R 19162233 19162364 + 17 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 9586 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_845 chr3R 2236717 2236805 + 17 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 4182 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding CG8478-S2-modencode_R1_peak_509 chr2R 15616113 15616370 + 17 NA promoter-TSS (FBgn0050220) tRNA-promoter-TSS (FBgn0050220) -151 FBgn0050220 FBgn0050220 FBtr0086332 tRNA:CR30220 tRNA CG8478-S2-modencode_R1_peak_682 chr3L 8698364 8698540 + 17 NA Intergenic Intergenic 14873 FBgn0011509 FBgn0011509 FBtr0076598 SrpRbeta protein_coding CG8478-S2-modencode_R1_peak_1006 chr3R 12708315 12708403 + 17 NA intron (FBgn0263610, intron 3 of 7) ncRNA-intron (FBgn0263610, intron 2 of 6) -9773 FBgn0263595 FBgn0263595 FBtr0309896 CR43617 ncRNA CG8478-S2-modencode_R1_peak_968 chr3R 10971163 10971309 + 17 NA promoter-TSS (FBgn0038293) protein_coding-promoter-TSS (FBgn0038293) 1593 FBgn0038293 FBgn0038293 FBtr0083037 CG6904 protein_coding CG8478-S2-modencode_R1_peak_286 chr2R 6416270 6416773 + 17 NA intron (FBgn0005630, intron 5 of 6) protein_coding-intron (FBgn0005630, intron 5 of 5) 6062 FBgn0005630 FBgn0005630 FBtr0089362 lola protein_coding CG8478-S2-modencode_R1_peak_394 chr2R 9883084 9883371 + 17 NA intron (FBgn0002643, intron 2 of 6) protein_coding-intron (FBgn0002643, intron 2 of 6) -5012 FBgn0020620 FBgn0020620 FBtr0087604 RN-tre protein_coding CG8478-S2-modencode_R1_peak_13 chr2L 523132 523528 + 17 NA promoter-TSS (FBgn0003963) protein_coding-promoter-TSS (FBgn0003963) 19250 FBgn0010602 FBgn0010602 FBtr0310029 lwr protein_coding CG8478-S2-modencode_R1_peak_377 chr2R 8920510 8920627 + 17 NA Intergenic Intergenic 14225 FBgn0033788 FBgn0033788 FBtr0087797 CG13323 protein_coding CG8478-S2-modencode_R1_peak_28 chr2L 1909663 1910156 + 17 NA exon (FBgn0031374, exon 2 of 19) protein_coding-exon (FBgn0031374, exon 2 of 19) 25287 FBgn0031374 FBgn0031374 FBtr0110882 CG7337 protein_coding CG8478-S2-modencode_R1_peak_216 chr2R 2028857 2029548 + 17 NA promoter-TSS (FBgn0011958) tRNA-promoter-TSS (FBgn0011958) -468 FBgn0011958 FBgn0011958 FBtr0085979 tRNA:R2:42Ad tRNA CG8478-S2-modencode_R1_peak_886 chr3R 5052611 5052752 + 17 NA promoter-TSS (FBgn0003165) protein_coding-promoter-TSS (FBgn0003165) 13308 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_1035 chr3R 14989923 14990471 + 17 NA exon (FBgn0010768, exon 1 of 3) protein_coding-exon (FBgn0010768, exon 1 of 3) 254 FBgn0010768 FBgn0010768 FBtr0083733 sqz protein_coding CG8478-S2-modencode_R1_peak_26 chr2L 1669644 1669734 + 17 NA intron (FBgn0086758, intron 1 of 5) protein_coding-intron (FBgn0086758, intron 2 of 6) 18431 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_1168 chr3R 25601403 25601760 + 17 NA intron (FBgn0001297, intron 1 of 2) protein_coding-intron (FBgn0001297, intron 1 of 2) 4872 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding CG8478-S2-modencode_R1_peak_827 chr3R 16 279 + 17 NA promoter-TSS (FBgn0037213) protein_coding-promoter-TSS (FBgn0037213) -207 FBgn0037213 FBgn0037213 FBtr0078962 CG12581 protein_coding CG8478-S2-modencode_R1_peak_1465 chrX 12528053 12528292 + 17 NA intron (FBgn0030412, intron 2 of 23) protein_coding-intron (FBgn0030412, intron 1 of 22) -2257 FBgn0262187 FBgn0262187 FBtr0304204 mir-970 pre_miRNA CG8478-S2-modencode_R1_peak_1073 chr3R 19026911 19027161 + 17 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) 2720 FBgn0011596 FBgn0011596 FBtr0084399 fzo protein_coding CG8478-S2-modencode_R1_peak_1295 chrX 3571352 3572035 + 17 NA intron (FBgn0023215, intron 1 of 8) protein_coding-intron (FBgn0023215, intron 1 of 8) -6158 FBgn0023216 FBgn0023216 FBtr0307279 Parg protein_coding CG8478-S2-modencode_R1_peak_1029 chr3R 14276144 14276374 + 17 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) -38906 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_331 chr2R 6995491 6995646 + 17 NA Intergenic Intergenic -1247 FBgn0040765 FBgn0040765 FBtr0088210 luna protein_coding CG8478-S2-modencode_R1_peak_1167 chr3R 25600479 25600657 + 17 NA intron (FBgn0001297, intron 1 of 2) protein_coding-intron (FBgn0001297, intron 1 of 2) 5885 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding CG8478-S2-modencode_R1_peak_182 chr2L 21250592 21250823 + 17 NA intron (FBgn0261239, intron 2 of 7) protein_coding-intron (FBgn0261239, intron 2 of 4) -10461 FBgn0021856 FBgn0021856 FBtr0081482 l(2)k14505 protein_coding CG8478-S2-modencode_R1_peak_424 chr2R 12467153 12467709 + 17 NA promoter-TSS (FBgn0016131) protein_coding-promoter-TSS (FBgn0016131) -198 FBgn0016131 FBgn0016131 FBtr0087104 Cdk4 protein_coding CG8478-S2-modencode_R1_peak_1276 chrX 3056060 3056399 + 17 NA intron (FBgn0004647, intron 5 of 8) protein_coding-intron (FBgn0004647, intron 5 of 8) 10944 FBgn0028746 FBgn0028746 FBtr0070543 CG18508 protein_coding CG8478-S2-modencode_R1_peak_1499 chrX 14733808 14734234 + 16 NA promoter-TSS (FBgn0052590) protein_coding-promoter-TSS (FBgn0052590) 614 FBgn0264078 FBgn0264078 FBtr0300435 Flo-2 protein_coding CG8478-S2-modencode_R1_peak_317 chr2R 6976696 6977012 + 16 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -2710 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_697 chr3L 10658555 10659243 + 16 NA intron (FBgn0010762, intron 1 of 8) protein_coding-intron (FBgn0010762, intron 2 of 9) 1060 FBgn0010762 FBgn0010762 FBtr0331573 simj protein_coding CG8478-S2-modencode_R1_peak_304 chr2R 6489187 6489962 + 16 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) -20134 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_167 chr2L 19361970 19362225 + 16 NA intron (FBgn0024245, intron 1 of 3) protein_coding-intron (FBgn0024245, intron 1 of 3) 1127 FBgn0024245 FBgn0024245 FBtr0081224 dnt protein_coding CG8478-S2-modencode_R1_peak_1254 chrX 549252 549690 + 16 NA promoter-TSS (FBgn0025637) protein_coding-promoter-TSS (FBgn0025637) -500 FBgn0025639 FBgn0025639 FBtr0308652 Hmt4-20 protein_coding CG8478-S2-modencode_R1_peak_1489 chrX 13094951 13095178 + 16 NA intron (FBgn0005410, intron 3 of 11) protein_coding-intron (FBgn0005410, intron 3 of 11) -6658 FBgn0030460 FBgn0030460 FBtr0073737 CG2453 protein_coding CG8478-S2-modencode_R1_peak_1255 chrX 1169423 1169696 + 16 NA promoter-TSS (FBgn0028550) protein_coding-promoter-TSS (FBgn0028550) -877 FBgn0028550 FBgn0028550 FBtr0330391 Atf3 protein_coding CG8478-S2-modencode_R1_peak_1080 chr3R 19152149 19152697 + 16 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 19461 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_1315 chrX 3673205 3673734 + 16 NA promoter-TSS (FBgn0086899) protein_coding-promoter-TSS (FBgn0086899) 1980 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_1300 chrX 3634754 3635330 + 16 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -21377 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_330 chr2R 6987906 6988094 + 16 NA intron (FBgn0040765, intron 1 of 4) protein_coding-intron (FBgn0040765, intron 1 of 4) 6321 FBgn0040765 FBgn0040765 FBtr0088210 luna protein_coding CG8478-S2-modencode_R1_peak_707 chr3L 11003349 11003765 + 16 NA Intergenic Intergenic -1624 FBgn0013469 FBgn0013469 FBtr0330080 klu protein_coding CG8478-S2-modencode_R1_peak_307 chr2R 6505758 6506035 + 16 NA intron (FBgn0033538, intron 1 of 9) protein_coding-intron (FBgn0033538, intron 1 of 8) -3812 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_1500 chrX 14768222 14768311 + 16 NA intron (FBgn0264078, intron 2 of 6) protein_coding-intron (FBgn0264078, intron 2 of 7) -3059 FBgn0030590 FBgn0030590 FBtr0073983 CG9518 protein_coding CG8478-S2-modencode_R1_peak_1535 chrX 18268550 18268922 + 16 NA TTS (FBgn0014467) protein_coding-TTS (FBgn0014467) -4585 FBgn0263769 FBgn0263769 FBtr0310488 CR43686 ncRNA CG8478-S2-modencode_R1_peak_1191 chr3R 26636799 26637199 + 16 NA intron (FBgn0027598, intron 1 of 5) protein_coding-intron (FBgn0027598, intron 1 of 5) 2661 FBgn0027598 FBgn0027598 FBtr0310072 cindr protein_coding CG8478-S2-modencode_R1_peak_1436 chrX 10276566 10276753 + 16 NA TTS (FBgn0030196) protein_coding-TTS (FBgn0030196) -1370 FBgn0052681 FBgn0052681 FBtr0071466 CG32681 protein_coding CG8478-S2-modencode_R1_peak_1324 chrX 4217782 4218046 + 16 NA intron (FBgn0262738, intron 1 of 14) protein_coding-intron (FBgn0262738, intron 1 of 14) 1255 FBgn0262738 FBgn0262738 FBtr0100670 norpA protein_coding CG8478-S2-modencode_R1_peak_1060 chr3R 17482222 17482492 + 16 NA intron (FBgn0011766, intron 1 of 7) protein_coding-intron (FBgn0011766, intron 1 of 7) 6323 FBgn0038893 FBgn0038893 FBtr0084116 CG6353 protein_coding CG8478-S2-modencode_R1_peak_933 chr3R 7179269 7179465 + 16 NA promoter-TSS (FBgn0026064) protein_coding-promoter-TSS (FBgn0026064) -514 FBgn0026064 FBgn0026064 FBtr0301426 KP78a protein_coding CG8478-S2-modencode_R1_peak_1203 chr4 76995 77166 + 16 NA promoter-TSS (FBgn0004859) protein_coding-promoter-TSS (FBgn0004859) -43 FBgn0264617 FBgn0264617 FBtr0333704 CR43957 ncRNA CG8478-S2-modencode_R1_peak_592 chr3L 641085 641606 + 16 NA promoter-TSS (FBgn0262451) pre_miRNA-promoter-TSS (FBgn0262451) -914 FBgn0262451 FBgn0262451 FBtr0304469 ban pre_miRNA CG8478-S2-modencode_R1_peak_1115 chr3R 20906148 20906427 + 16 NA Intergenic Intergenic -2987 FBgn0004897 FBgn0004897 FBtr0084770 fd96Ca protein_coding CG8478-S2-modencode_R1_peak_1243 chrUextra 10241479 10241616 + 16 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1372 chrX 7603001 7603142 + 16 NA TTS (FBgn0262979) protein_coding-TTS (FBgn0262979) 1263 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_326 chr2R 6982536 6982823 + 16 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -8535 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_1272 chrX 2228084 2228571 + 16 NA exon (FBgn0044047, exon 1 of 3) protein_coding-exon (FBgn0044047, exon 1 of 3) -1886 FBgn0044047 FBgn0044047 FBtr0333731 Ilp6 protein_coding CG8478-S2-modencode_R1_peak_203 chr2R 1598373 1598549 + 16 NA intron (FBgn0000099, intron 1 of 4) protein_coding-intron (FBgn0000099, intron 4 of 7) 6093 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding CG8478-S2-modencode_R1_peak_1359 chrX 7435197 7435394 + 16 NA Intergenic Intergenic -4373 FBgn0052720 FBgn0052720 FBtr0304870 CG32720 protein_coding CG8478-S2-modencode_R1_peak_114 chr2L 12457319 12457490 + 16 NA exon (FBgn0259176, exon 3 of 3) protein_coding-exon (FBgn0259176, exon 3 of 3) 2686 FBgn0262203 FBgn0262203 FBtr0304239 mir-967 pre_miRNA CG8478-S2-modencode_R1_peak_897 chr3R 5246091 5246253 + 16 NA intron (FBgn0261552, intron 1 of 6) protein_coding-intron (FBgn0261552, intron 2 of 7) 2508 FBgn0261552 FBgn0261552 FBtr0302691 ps protein_coding CG8478-S2-modencode_R1_peak_376 chr2R 8902246 8902543 + 16 NA Intergenic Intergenic 18388 FBgn0008654 FBgn0008654 FBtr0087793 Su(z)2 protein_coding CG8478-S2-modencode_R1_peak_278 chr2R 6098945 6099182 + 16 NA promoter-TSS (FBgn0000448) protein_coding-promoter-TSS (FBgn0000448) -11867 FBgn0085250 FBgn0085250 FBtr0299834 CG34221 protein_coding CG8478-S2-modencode_R1_peak_1138 chr3R 22054869 22054982 + 16 NA Intergenic Intergenic -1049 FBgn0039419 FBgn0039419 FBtr0084990 CG12290 protein_coding CG8478-S2-modencode_R1_peak_1371 chrX 7602055 7602601 + 16 NA exon (FBgn0262979, exon 1 of 2) protein_coding-exon (FBgn0262979, exon 1 of 2) 520 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_1198 chr3R 27050565 27050667 + 16 NA promoter-TSS (FBgn0039831) protein_coding-promoter-TSS (FBgn0039831) 4190 FBgn0039831 FBgn0039831 FBtr0113312 CG12054 protein_coding CG8478-S2-modencode_R1_peak_1403 chrX 9390298 9390705 + 16 NA promoter-TSS (FBgn0261260) protein_coding-promoter-TSS (FBgn0261260) -280 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_374 chr2R 8845119 8845305 + 16 NA Intergenic Intergenic 4151 FBgn0033787 FBgn0033787 FBtr0087792 CG13321 protein_coding CG8478-S2-modencode_R1_peak_252 chr2R 3955764 3956092 + 16 NA promoter-TSS (FBgn0040778) protein_coding-promoter-TSS (FBgn0040778) 468 FBgn0020279 FBgn0020279 FBtr0100575 lig protein_coding CG8478-S2-modencode_R1_peak_1546 chrX 19472386 19472571 + 16 NA intron (FBgn0031030, intron 1 of 12) protein_coding-intron (FBgn0031030, intron 1 of 12) 1295 FBgn0031030 FBgn0031030 FBtr0309237 Tao protein_coding CG8478-S2-modencode_R1_peak_298 chr2R 6453248 6453418 + 16 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 7940 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_1181 chr3R 26163454 26164091 + 16 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) -31413 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_741 chr3L 15820148 15820381 + 16 NA promoter-TSS (FBgn0036534) protein_coding-promoter-TSS (FBgn0036534) 276 FBgn0040230 FBgn0040230 FBtr0332133 dbo protein_coding CG8478-S2-modencode_R1_peak_589 chr3L 639275 639483 + 16 NA promoter-TSS (FBgn0263342) ncRNA-promoter-TSS (FBgn0263342) -1338 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA CG8478-S2-modencode_R1_peak_494 chr2R 15177897 15178030 + 16 NA TTS (FBgn0034429) protein_coding-TTS (FBgn0034429) 356 FBgn0013954 FBgn0013954 FBtr0086515 FK506-bp2 protein_coding CG8478-S2-modencode_R1_peak_1142 chr3R 22297540 22297744 + 16 NA exon (FBgn0039431, exon 11 of 11) protein_coding-exon (FBgn0039431, exon 11 of 11) 5847 FBgn0039430 FBgn0039430 FBtr0085017 CG5455 protein_coding CG8478-S2-modencode_R1_peak_524 chr2R 17262175 17262403 + 16 NA intron (FBgn0000395, intron 1 of 6) protein_coding-intron (FBgn0000395, intron 1 of 6) 4678 FBgn0000395 FBgn0000395 FBtr0071610 cv-2 protein_coding CG8478-S2-modencode_R1_peak_1239 chrUextra 3080976 3081086 + 16 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1106 chr3R 20059389 20060460 + 16 NA intron (FBgn0043884, intron 2 of 16) protein_coding-intron (FBgn0043884, intron 2 of 16) -2956 FBgn0261452 FBgn0261452 FBtr0309753 scaRNA:mgU2-25 snoRNA CG8478-S2-modencode_R1_peak_243 chr2R 3632950 3633454 + 16 NA promoter-TSS (FBgn0050497) protein_coding-promoter-TSS (FBgn0050497) -400 FBgn0050497 FBgn0050497 FBtr0088932 CG30497 protein_coding CG8478-S2-modencode_R1_peak_1490 chrX 13165072 13165256 + 16 NA intron (FBgn0041210, intron 4 of 13) protein_coding-intron (FBgn0041210, intron 2 of 11) 12151 FBgn0000346 FBgn0000346 FBtr0073754 comt protein_coding CG8478-S2-modencode_R1_peak_142 chr2L 16271961 16272167 + 16 NA intron (FBgn0001994, intron 2 of 2) protein_coding-intron (FBgn0001994, intron 2 of 2) 9923 FBgn0028897 FBgn0028897 FBtr0080825 CG4935 protein_coding CG8478-S2-modencode_R1_peak_1561 chrX 20282814 20282914 + 16 NA TTS (FBgn0031108) protein_coding-TTS (FBgn0031108) 1771 FBgn0031108 FBgn0031108 FBtr0077329 CG15459 protein_coding CG8478-S2-modencode_R1_peak_567 chr2R 20744782 20744870 + 16 NA Intergenic Intergenic 8327 FBgn0035070 FBgn0035070 FBtr0072380 CG3650 protein_coding CG8478-S2-modencode_R1_peak_124 chr2L 12546013 12546471 + 16 NA exon (FBgn0259176, exon 1 of 7) protein_coding-exon (FBgn0259176, exon 1 of 7) 3066 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA CG8478-S2-modencode_R1_peak_662 chr3L 7428629 7428829 + 16 NA promoter-TSS (FBgn0014011) protein_coding-promoter-TSS (FBgn0014011) -439 FBgn0014011 FBgn0014011 FBtr0076867 Rac2 protein_coding CG8478-S2-modencode_R1_peak_73 chr2L 7961763 7962054 + 16 NA intron (FBgn0085450, intron 1 of 1) protein_coding-intron (FBgn0085450, intron 1 of 1) 15157 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding CG8478-S2-modencode_R1_peak_357 chr2R 7527029 7527148 + 16 NA intron (FBgn0033638, intron 1 of 7) protein_coding-intron (FBgn0033638, intron 1 of 7) 1330 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding CG8478-S2-modencode_R1_peak_427 chr2R 12548047 12548224 + 16 NA intron (FBgn0024315, intron 2 of 5) protein_coding-intron (FBgn0024315, intron 2 of 5) -1477 FBgn0024315 FBgn0024315 FBtr0087115 Picot protein_coding CG8478-S2-modencode_R1_peak_1230 chrU 544337 544615 + 16 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1063 chr3R 17700770 17701193 + 16 NA promoter-TSS (FBgn0038912) protein_coding-promoter-TSS (FBgn0038912) -34 FBgn0038912 FBgn0038912 FBtr0300077 CG6656 protein_coding CG8478-S2-modencode_R1_peak_1565 chrX 21046101 21046273 + 16 NA Intergenic Intergenic -18093 FBgn0031163 FBgn0031163 FBtr0077256 CG14579 protein_coding CG8478-S2-modencode_R1_peak_193 chr2L 22363536 22364051 + 16 NA exon (FBgn0039972, exon 2 of 7) protein_coding-exon (FBgn0039972, exon 2 of 7) 9438 FBgn0039972 FBgn0039972 FBtr0306236 CG17018 protein_coding CG8478-S2-modencode_R1_peak_361 chr2R 7932286 7932431 + 16 NA exon (FBgn0024732, exon 1 of 4) protein_coding-exon (FBgn0024732, exon 1 of 4) 237 FBgn0024732 FBgn0024732 FBtr0330629 Drep-1 protein_coding CG8478-S2-modencode_R1_peak_270 chr2R 5817157 5817857 + 16 NA promoter-TSS (FBgn0011656) protein_coding-promoter-TSS (FBgn0011656) 19109 FBgn0033465 FBgn0033465 FBtr0308338 CG12140 protein_coding CG8478-S2-modencode_R1_peak_882 chr3R 4858906 4859116 + 16 NA exon (FBgn0002932, exon 1 of 3) protein_coding-exon (FBgn0002932, exon 1 of 3) -4990 FBgn0037657 FBgn0037657 FBtr0081968 hyx protein_coding CG8478-S2-modencode_R1_peak_1554 chrX 19787315 19787757 + 16 NA promoter-TSS (FBgn0052529) protein_coding-promoter-TSS (FBgn0052529) -3443 FBgn0086782 FBgn0086782 FBtr0074802 amn protein_coding CG8478-S2-modencode_R1_peak_1485 chrX 12654643 12655171 + 16 NA promoter-TSS (FBgn0020513) protein_coding-promoter-TSS (FBgn0020513) -257 FBgn0020513 FBgn0020513 FBtr0073705 ade5 protein_coding CG8478-S2-modencode_R1_peak_1311 chrX 3667743 3667951 + 16 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 3 of 9) 1174 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_1114 chr3R 20597385 20597475 + 16 NA promoter-TSS (FBgn0259233) protein_coding-promoter-TSS (FBgn0259233) -2239 FBgn0259233 FBgn0259233 FBtr0299843 CG42331 protein_coding CG8478-S2-modencode_R1_peak_1525 chrX 16493999 16494092 + 16 NA promoter-TSS (FBgn0030761) protein_coding-promoter-TSS (FBgn0030761) 689 FBgn0061200 FBgn0061200 FBtr0299587 Nup153 protein_coding CG8478-S2-modencode_R1_peak_750 chr3L 16703808 16703993 + 16 NA intron (FBgn0264605, intron 1 of 5) protein_coding-intron (FBgn0063485, intron 1 of 6) 877 FBgn0063485 FBgn0063485 FBtr0306152 Lasp protein_coding CG8478-S2-modencode_R1_peak_476 chr2R 14496899 14497002 + 16 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 2310 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding CG8478-S2-modencode_R1_peak_712 chr3L 11527706 11528099 + 16 NA promoter-TSS (FBgn0259481) protein_coding-promoter-TSS (FBgn0259481) -324 FBgn0259481 FBgn0259481 FBtr0333217 Mob2 protein_coding CG8478-S2-modencode_R1_peak_141 chr2L 15913409 15913842 + 16 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) -3263 FBgn0032577 FBgn0032577 FBtr0080792 CG13244 protein_coding CG8478-S2-modencode_R1_peak_407 chr2R 10414261 10414492 + 16 NA exon (FBgn0020245, exon 1 of 10) protein_coding-exon (FBgn0020245, exon 1 of 10) -11663 FBgn0033942 FBgn0033942 FBtr0087514 Cpr51A protein_coding CG8478-S2-modencode_R1_peak_1014 chr3R 13275268 13275376 + 16 NA promoter-TSS (FBgn0000564) protein_coding-promoter-TSS (FBgn0000564) -72 FBgn0000564 FBgn0000564 FBtr0083444 Eh protein_coding CG8478-S2-modencode_R1_peak_442 chr2R 13307928 13308525 + 16 NA exon (FBgn0022029, exon 1 of 7) protein_coding-exon (FBgn0022029, exon 1 of 7) 288 FBgn0022029 FBgn0022029 FBtr0086915 l(2)k01209 protein_coding CG8478-S2-modencode_R1_peak_1082 chr3R 19158180 19158330 + 16 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 13629 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_646 chr3L 4543931 4544868 + 16 NA intron (FBgn0035558, intron 2 of 3) protein_coding-intron (FBgn0035558, intron 2 of 3) 2348 FBgn0035558 FBgn0035558 FBtr0113142 CG11357 protein_coding CG8478-S2-modencode_R1_peak_11 chr2L 505329 505610 + 16 NA intron (FBgn0003963, intron 2 of 8) protein_coding-intron (FBgn0003963, intron 1 of 7) -25781 FBgn0043364 FBgn0043364 FBtr0310030 cbt protein_coding CG8478-S2-modencode_R1_peak_1374 chrX 7802723 7802815 + 16 NA promoter-TSS (FBgn0029975) protein_coding-promoter-TSS (FBgn0029975) -142 FBgn0029975 FBgn0029975 FBtr0071091 CG1444 protein_coding CG8478-S2-modencode_R1_peak_1183 chr3R 26285937 26286158 + 16 NA promoter-TSS (FBgn0039774) protein_coding-promoter-TSS (FBgn0039774) 804 FBgn0039774 FBgn0039774 FBtr0085649 CDase protein_coding CG8478-S2-modencode_R1_peak_218 chr2R 2034348 2034596 + 16 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) -4523 FBgn0011891 FBgn0011891 FBtr0086017 tRNA:K2:42Ae tRNA CG8478-S2-modencode_R1_peak_1347 chrX 6428204 6428339 + 16 NA promoter-TSS (FBgn0014026) protein_coding-promoter-TSS (FBgn0014026) 228 FBgn0000524 FBgn0000524 FBtr0070914 dx protein_coding CG8478-S2-modencode_R1_peak_445 chr2R 13340943 13341087 + 16 NA promoter-TSS (FBgn0034221) protein_coding-promoter-TSS (FBgn0034221) 91 FBgn0034221 FBgn0034221 FBtr0086919 CG10764 protein_coding CG8478-S2-modencode_R1_peak_1219 chr4 1274619 1275081 + 16 NA exon (FBgn0053653, exon 24 of 24) protein_coding-exon (FBgn0053653, exon 24 of 24) 40287 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_781 chr3L 18236883 18236979 + 16 NA Intergenic Intergenic -8257 FBgn0036783 FBgn0036783 FBtr0075129 CheA75a protein_coding CG8478-S2-modencode_R1_peak_386 chr2R 9709829 9710043 + 16 NA intron (FBgn0000662, intron 1 of 4) protein_coding-intron (FBgn0000662, intron 1 of 3) 2118 FBgn0000662 FBgn0000662 FBtr0304697 fl(2)d protein_coding CG8478-S2-modencode_R1_peak_329 chr2R 6986418 6986621 + 16 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) 7802 FBgn0040765 FBgn0040765 FBtr0088210 luna protein_coding CG8478-S2-modencode_R1_peak_477 chr2R 14498161 14498312 + 16 NA TTS (FBgn0261587) protein_coding-TTS (FBgn0261587) 1024 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding CG8478-S2-modencode_R1_peak_822 chr3L 22942806 22943112 + 16 NA intron (FBgn0037207, intron 2 of 2) protein_coding-intron (FBgn0037207, intron 2 of 2) 3864 FBgn0037207 FBgn0037207 FBtr0078563 Mes2 protein_coding CG8478-S2-modencode_R1_peak_505 chr2R 15518507 15519010 + 16 NA promoter-TSS (FBgn0003435) protein_coding-promoter-TSS (FBgn0003435) -4026 FBgn0261807 FBgn0261807 FBtr0303283 CG42753 protein_coding CG8478-S2-modencode_R1_peak_22 chr2L 1665310 1666002 + 16 NA intron (FBgn0086758, intron 2 of 6) protein_coding-intron (FBgn0086758, intron 2 of 6) 14398 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_36 chr2L 2376306 2376503 + 16 NA promoter-TSS (FBgn0031420) protein_coding-promoter-TSS (FBgn0031420) 563 FBgn0031420 FBgn0031420 FBtr0331437 CG9866 protein_coding CG8478-S2-modencode_R1_peak_748 chr3L 16614998 16615240 + 16 NA TTS (FBgn0000017) protein_coding-TTS (FBgn0000017) -6547 FBgn0017572 FBgn0017572 FBtr0331560 Mo25 protein_coding CG8478-S2-modencode_R1_peak_1498 chrX 14719965 14720330 + 16 NA promoter-TSS (FBgn0003301) protein_coding-promoter-TSS (FBgn0003301) -209 FBgn0003301 FBgn0003301 FBtr0333655 rut protein_coding CG8478-S2-modencode_R1_peak_1180 chr3R 26161817 26162739 + 16 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) -29919 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_738 chr3L 15527875 15528196 + 16 NA promoter-TSS (FBgn0004396) protein_coding-promoter-TSS (FBgn0004396) -479 FBgn0004396 FBgn0004396 FBtr0075557 CrebA protein_coding CG8478-S2-modencode_R1_peak_1022 chr3R 13529589 13529779 + 16 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) 14375 FBgn0261885 FBgn0261885 FBtr0301487 osa protein_coding CG8478-S2-modencode_R1_peak_745 chr3L 16152670 16152758 + 16 NA intron (FBgn0036576, intron 1 of 4) protein_coding-intron (FBgn0036576, intron 1 of 4) 5087 FBgn0036576 FBgn0036576 FBtr0307519 CG5151 protein_coding CG8478-S2-modencode_R1_peak_1067 chr3R 18222997 18223243 + 16 NA promoter-TSS (FBgn0051166) tRNA-promoter-TSS (FBgn0051166) -137 FBgn0051167 FBgn0051167 FBtr0084232 tRNA:CR31167 tRNA CG8478-S2-modencode_R1_peak_622 chr3L 3247180 3247519 + 16 NA promoter-TSS (FBgn0263246) protein_coding-promoter-TSS (FBgn0263246) -666 FBgn0263246 FBgn0263246 FBtr0308062 CG43389 protein_coding CG8478-S2-modencode_R1_peak_69 chr2L 7425224 7425390 + 16 NA promoter-TSS (FBgn0262453) pre_miRNA-promoter-TSS (FBgn0262453) -546 FBgn0262453 FBgn0262453 FBtr0304473 mir-275 pre_miRNA CG8478-S2-modencode_R1_peak_530 chr2R 17393741 17393842 + 16 NA exon (FBgn0043070, exon 1 of 8) protein_coding-exon (FBgn0043070, exon 1 of 8) 4189 FBgn0043070 FBgn0043070 FBtr0089706 MESK2 protein_coding CG8478-S2-modencode_R1_peak_1410 chrX 9473014 9473704 + 16 NA intron (FBgn0052699, intron 1 of 7) protein_coding-intron (FBgn0052699, intron 1 of 6) 649 FBgn0052699 FBgn0052699 FBtr0071369 CG32699 protein_coding CG8478-S2-modencode_R1_peak_8 chr2L 298072 298322 + 16 NA TTS (FBgn0024352) protein_coding-TTS (FBgn0024352) 317 FBgn0020622 FBgn0020622 FBtr0331207 Pi3K21B protein_coding CG8478-S2-modencode_R1_peak_838 chr3R 1090451 1090554 + 16 NA promoter-TSS (FBgn0264652) protein_coding-promoter-TSS (FBgn0264652) -164 FBgn0264652 FBgn0264652 FBtr0078782 Hph protein_coding CG8478-S2-modencode_R1_peak_1096 chr3R 19841731 19841917 + 16 NA intron (FBgn0020647, intron 2 of 10) protein_coding-intron (FBgn0020647, intron 2 of 11) -10074 FBgn0020647 FBgn0020647 FBtr0301419 KrT95D protein_coding CG8478-S2-modencode_R1_peak_408 chr2R 10460501 10460591 + 15 NA intron (FBgn0010397, intron 1 of 3) protein_coding-intron (FBgn0020245, intron 5 of 9) 2730 FBgn0010397 FBgn0010397 FBtr0333166 LamC protein_coding CG8478-S2-modencode_R1_peak_1045 chr3R 16654831 16655028 + 15 NA intron (FBgn0027493, intron 1 of 5) protein_coding-intron (FBgn0027493, intron 1 of 4) 1408 FBgn0027493 FBgn0027493 FBtr0310504 CG17273 protein_coding CG8478-S2-modencode_R1_peak_54 chr2L 5299129 5299260 + 15 NA promoter-TSS (FBgn0016076) protein_coding-promoter-TSS (FBgn0016076) -6528 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_780 chr3L 18180983 18181074 + 15 NA Intergenic Intergenic -2287 FBgn0003997 FBgn0003997 FBtr0332862 W protein_coding CG8478-S2-modencode_R1_peak_1027 chr3R 14272824 14272945 + 15 NA exon (FBgn0004652, exon 1 of 6) protein_coding-exon (FBgn0004652, exon 1 of 6) -35531 FBgn0038621 FBgn0038621 FBtr0083654 CG10864 protein_coding CG8478-S2-modencode_R1_peak_661 chr3L 7426764 7426959 + 15 NA TTS (FBgn0014011) protein_coding-TTS (FBgn0014011) 1429 FBgn0014011 FBgn0014011 FBtr0076867 Rac2 protein_coding CG8478-S2-modencode_R1_peak_499 chr2R 15309857 15310192 + 15 NA intron (FBgn0263391, intron 1 of 12) protein_coding-intron (FBgn0263391, intron 2 of 11) 2427 FBgn0263391 FBgn0263391 FBtr0309107 hts protein_coding CG8478-S2-modencode_R1_peak_247 chr2R 3670409 3670754 + 15 NA promoter-TSS (FBgn0050497) protein_coding-promoter-TSS (FBgn0050497) 2130 FBgn0000337 FBgn0000337 FBtr0088931 cn protein_coding CG8478-S2-modencode_R1_peak_1121 chr3R 21343632 21343824 + 15 NA promoter-TSS (FBgn0011666) protein_coding-promoter-TSS (FBgn0011666) 11731 FBgn0039343 FBgn0039343 FBtr0084880 CG5111 protein_coding CG8478-S2-modencode_R1_peak_655 chr3L 6211035 6211524 + 15 NA promoter-TSS (FBgn0002526) protein_coding-promoter-TSS (FBgn0002526) -157 FBgn0002526 FBgn0002526 FBtr0077014 LanA protein_coding CG8478-S2-modencode_R1_peak_1057 chr3R 17405909 17406011 + 15 NA exon (FBgn0013984, exon 4 of 13) protein_coding-exon (FBgn0013984, exon 4 of 13) 9953 FBgn0013984 FBgn0013984 FBtr0290232 InR protein_coding CG8478-S2-modencode_R1_peak_678 chr3L 8180397 8180487 + 15 NA promoter-TSS (FBgn0035849) protein_coding-promoter-TSS (FBgn0035849) 347 FBgn0035850 FBgn0035850 FBtr0321321 Atg18 protein_coding CG8478-S2-modencode_R1_peak_947 chr3R 8843727 8843985 + 15 NA promoter-TSS (FBgn0020496) protein_coding-promoter-TSS (FBgn0020496) 6468 FBgn0020496 FBgn0020496 FBtr0082702 CtBP protein_coding CG8478-S2-modencode_R1_peak_98 chr2L 9907474 9907645 + 15 NA intron (FBgn0032156, intron 2 of 8) protein_coding-intron (FBgn0032156, intron 2 of 9) 1074 FBgn0032156 FBgn0032156 FBtr0290197 CG13124 protein_coding CG8478-S2-modencode_R1_peak_205 chr2R 1608082 1608340 + 15 NA intron (FBgn0000099, intron 1 of 7) protein_coding-intron (FBgn0000099, intron 1 of 7) -3657 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding CG8478-S2-modencode_R1_peak_196 chr2R 136151 136284 + 15 NA Intergenic Intergenic -5773 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding CG8478-S2-modencode_R1_peak_1294 chrX 3566337 3566505 + 15 NA promoter-TSS (FBgn0023216) protein_coding-promoter-TSS (FBgn0023216) -886 FBgn0023216 FBgn0023216 FBtr0307279 Parg protein_coding CG8478-S2-modencode_R1_peak_1398 chrX 9364559 9364688 + 15 NA intron (FBgn0261260, intron 2 of 2) protein_coding-intron (FBgn0261260, intron 2 of 14) 25598 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_1012 chr3R 12940722 12941007 + 15 NA intron (FBgn0014141, intron 3 of 17) protein_coding-intron (FBgn0014141, intron 2 of 15) -5337 FBgn0085307 FBgn0085307 FBtr0112473 CG34278 protein_coding CG8478-S2-modencode_R1_peak_1152 chr3R 24156514 24156843 + 15 NA exon (FBgn0261618, exon 1 of 6) protein_coding-exon (FBgn0261618, exon 1 of 6) 4585 FBgn0261618 FBgn0261618 FBtr0301181 larp protein_coding CG8478-S2-modencode_R1_peak_418 chr2R 12042382 12042653 + 15 NA intron (FBgn0034083, intron 1 of 8) protein_coding-intron (FBgn0034083, intron 1 of 8) 3782 FBgn0034082 FBgn0034082 FBtr0087250 CG10734 protein_coding CG8478-S2-modencode_R1_peak_117 chr2L 12495062 12495532 + 15 NA intron (FBgn0259176, intron 5 of 6) protein_coding-intron (FBgn0259176, intron 6 of 7) 2036 FBgn0051858 FBgn0051858 FBtr0080381 t-cup protein_coding CG8478-S2-modencode_R1_peak_1046 chr3R 16655544 16655744 + 15 NA intron (FBgn0027493, intron 1 of 5) protein_coding-intron (FBgn0027493, intron 1 of 4) 693 FBgn0027493 FBgn0027493 FBtr0310504 CG17273 protein_coding CG8478-S2-modencode_R1_peak_1408 chrX 9444822 9445048 + 15 NA TTS (FBgn0028327) protein_coding-TTS (FBgn0028327) 327 FBgn0052700 FBgn0052700 FBtr0071374 CG32700 protein_coding CG8478-S2-modencode_R1_peak_319 chr2R 6977661 6977888 + 15 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -3630 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_269 chr2R 5761825 5762039 + 15 NA promoter-TSS (FBgn0033459) protein_coding-promoter-TSS (FBgn0033459) -918 FBgn0033459 FBgn0033459 FBtr0088378 CG12744 protein_coding CG8478-S2-modencode_R1_peak_1488 chrX 13022206 13022485 + 15 NA promoter-TSS (FBgn0030451) protein_coding-promoter-TSS (FBgn0030451) 318 FBgn0065101 FBgn0065101 FBtr0091636 snmRNA:204 ncRNA CG8478-S2-modencode_R1_peak_749 chr3L 16703210 16703376 + 15 NA intron (FBgn0264605, intron 1 of 5) protein_coding-intron (FBgn0063485, intron 1 of 6) 1484 FBgn0063485 FBgn0063485 FBtr0306152 Lasp protein_coding CG8478-S2-modencode_R1_peak_1426 chrX 9747556 9747822 + 15 NA Intergenic Intergenic -11562 FBgn0019929 FBgn0019929 FBtr0071387 Ser7 protein_coding CG8478-S2-modencode_R1_peak_721 chr3L 12683964 12684079 + 15 NA Intergenic Intergenic -2718 FBgn0014343 FBgn0014343 FBtr0075912 mirr protein_coding CG8478-S2-modencode_R1_peak_949 chr3R 9189923 9190055 + 15 NA promoter-TSS (FBgn0027610) protein_coding-promoter-TSS (FBgn0027610) 321 FBgn0086371 FBgn0086371 FBtr0082772 poly protein_coding CG8478-S2-modencode_R1_peak_1032 chr3R 14743564 14743838 + 15 NA promoter-TSS (FBgn0261113) protein_coding-promoter-TSS (FBgn0261113) -510 FBgn0261113 FBgn0261113 FBtr0083703 Xrp1 protein_coding CG8478-S2-modencode_R1_peak_760 chr3L 17564815 17565014 + 15 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -5652 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_1270 chrX 2199746 2200268 + 15 NA intron (FBgn0003079, intron 2 of 5) protein_coding-intron (FBgn0003079, intron 2 of 5) 10090 FBgn0003079 FBgn0003079 FBtr0111025 phl protein_coding CG8478-S2-modencode_R1_peak_1288 chrX 3283457 3284481 + 15 NA exon (FBgn0262656, exon 3 of 3) protein_coding-exon (FBgn0262656, exon 3 of 3) 16777 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_1215 chr4 1265231 1265415 + 15 NA intron (FBgn0053653, intron 18 of 22) protein_coding-intron (FBgn0053653, intron 18 of 23) 30760 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_1253 chrX 548207 548601 + 15 NA intron (FBgn0025639, intron 1 of 2) protein_coding-intron (FBgn0025639, intron 1 of 2) 567 FBgn0025639 FBgn0025639 FBtr0308652 Hmt4-20 protein_coding CG8478-S2-modencode_R1_peak_422 chr2R 12113449 12113558 + 15 NA promoter-TSS (FBgn0034094) protein_coding-promoter-TSS (FBgn0034094) -528 FBgn0034094 FBgn0034094 FBtr0087130 Tsf3 protein_coding CG8478-S2-modencode_R1_peak_1214 chr4 1264067 1264465 + 15 NA intron (FBgn0053653, intron 18 of 22) protein_coding-intron (FBgn0053653, intron 18 of 23) 29703 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_452 chr2R 13756717 13757220 + 15 NA intron (FBgn0034282, intron 2 of 6) protein_coding-intron (FBgn0034282, intron 3 of 6) 2547 FBgn0034282 FBgn0034282 FBtr0113091 Mapmodulin protein_coding CG8478-S2-modencode_R1_peak_1102 chr3R 20038120 20038250 + 15 NA intron (FBgn0011725, intron 5 of 7) protein_coding-intron (FBgn0011725, intron 5 of 7) 6255 FBgn0039167 FBgn0039167 FBtr0084572 CG17786 protein_coding CG8478-S2-modencode_R1_peak_323 chr2R 6980189 6980427 + 15 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -6164 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_465 chr2R 14286929 14287017 + 15 NA promoter-TSS (FBgn0063498) protein_coding-promoter-TSS (FBgn0063498) -25 FBgn0063498 FBgn0063498 FBtr0086670 GstE2 protein_coding CG8478-S2-modencode_R1_peak_1220 chr4 1275280 1275601 + 15 NA TTS (FBgn0053653) protein_coding-TTS (FBgn0053653) 40877 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_336 chr2R 7086283 7086451 + 15 NA exon (FBgn0003396, exon 1 of 7) protein_coding-exon (FBgn0003396, exon 1 of 7) 20402 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding CG8478-S2-modencode_R1_peak_1370 chrX 7599643 7600113 + 15 NA promoter-TSS (FBgn0029504) protein_coding-promoter-TSS (FBgn0029504) -1930 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_238 chr2R 3495391 3495619 + 15 NA intron (FBgn0033196, intron 2 of 10) protein_coding-intron (FBgn0033196, intron 2 of 10) 12711 FBgn0033196 FBgn0033196 FBtr0088950 CG1358 protein_coding CG8478-S2-modencode_R1_peak_1503 chrX 14937872 14938015 + 15 NA promoter-TSS (FBgn0030603) protein_coding-promoter-TSS (FBgn0030603) -3586 FBgn0030603 FBgn0030603 FBtr0073959 CG5541 protein_coding CG8478-S2-modencode_R1_peak_1540 chrX 19054551 19054652 + 15 NA intron (FBgn0261461, intron 2 of 5) protein_coding-intron (FBgn0261461, intron 1 of 4) 8654 FBgn0263571 FBgn0263571 FBtr0309726 mir-4959 pre_miRNA CG8478-S2-modencode_R1_peak_1077 chr3R 19140551 19140796 + 15 NA promoter-TSS (FBgn0003118) protein_coding-promoter-TSS (FBgn0003118) -24762 FBgn0039071 FBgn0039071 FBtr0084382 CG4434 protein_coding CG8478-S2-modencode_R1_peak_568 chr2R 20972556 20972676 + 15 NA promoter-TSS (FBgn0004919) protein_coding-promoter-TSS (FBgn0004919) -773 FBgn0004919 FBgn0004919 FBtr0306330 gol protein_coding CG8478-S2-modencode_R1_peak_1358 chrX 7201615 7201845 + 15 NA promoter-TSS (FBgn0024250) protein_coding-promoter-TSS (FBgn0024250) -244 FBgn0024250 FBgn0024250 FBtr0071048 brk protein_coding CG8478-S2-modencode_R1_peak_663 chr3L 7712238 7712357 + 15 NA promoter-TSS (FBgn0035811) protein_coding-promoter-TSS (FBgn0035811) -164 FBgn0035811 FBgn0035811 FBtr0076808 CG12262 protein_coding CG8478-S2-modencode_R1_peak_295 chr2R 6446108 6446697 + 15 NA intron (FBgn0263102, intron 1 of 10) protein_coding-intron (FBgn0263102, intron 1 of 9) 1009 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_1267 chrX 2162181 2162320 + 15 NA intron (FBgn0023528, intron 2 of 8) protein_coding-intron (FBgn0023528, intron 2 of 8) 2462 FBgn0023528 FBgn0023528 FBtr0300793 CG2924 protein_coding CG8478-S2-modencode_R1_peak_570 chr2R 21102809 21102955 + 15 NA intron (FBgn0035094, intron 2 of 8) protein_coding-intron (FBgn0035094, intron 2 of 8) -11252 FBgn0001325 FBgn0001325 FBtr0072449 Kr protein_coding CG8478-S2-modencode_R1_peak_539 chr2R 18104452 18104950 + 15 NA TTS (FBgn0025186) protein_coding-TTS (FBgn0025186) 1302 FBgn0050278 FBgn0050278 FBtr0071780 CG30278 protein_coding CG8478-S2-modencode_R1_peak_478 chr2R 14539621 14539753 + 15 NA intron (FBgn0034371, intron 1 of 5) protein_coding-intron (FBgn0034371, intron 1 of 6) 592 FBgn0034371 FBgn0034371 FBtr0086658 SP2637 protein_coding CG8478-S2-modencode_R1_peak_385 chr2R 9427328 9427677 + 15 NA promoter-TSS (FBgn0033853) protein_coding-promoter-TSS (FBgn0033853) -472 FBgn0033853 FBgn0033853 FBtr0300193 CG6145 protein_coding CG8478-S2-modencode_R1_peak_862 chr3R 3015107 3015280 + 15 NA intron (FBgn0086372, intron 1 of 14) protein_coding-intron (FBgn0086372, intron 1 of 10) 2470 FBgn0086372 FBgn0086372 FBtr0305153 lap protein_coding CG8478-S2-modencode_R1_peak_227 chr2R 2518395 2518886 + 15 NA intron (FBgn0262736, intron 2 of 3) protein_coding-intron (FBgn0262736, intron 2 of 3) 1246 FBgn0262736 FBgn0262736 FBtr0086153 Vha16-1 protein_coding CG8478-S2-modencode_R1_peak_763 chr3L 17583594 17584099 + 15 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -24584 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_306 chr2R 6505162 6505515 + 15 NA TTS (FBgn0263102) protein_coding-TTS (FBgn0263102) -4370 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_1443 chrX 10416172 10416386 + 15 NA intron (FBgn0085443, intron 4 of 10) protein_coding-intron (FBgn0085443, intron 3 of 9) -35619 FBgn0052687 FBgn0052687 FBtr0071458 CG32687 protein_coding CG8478-S2-modencode_R1_peak_666 chr3L 7849479 7849634 + 15 NA promoter-TSS (FBgn0016694) protein_coding-promoter-TSS (FBgn0016694) 10913 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding CG8478-S2-modencode_R1_peak_1072 chr3R 19017090 19017224 + 15 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) 12599 FBgn0011596 FBgn0011596 FBtr0084399 fzo protein_coding CG8478-S2-modencode_R1_peak_1287 chrX 3280930 3281084 + 15 NA TTS (FBgn0262656) protein_coding-TTS (FBgn0262656) 13815 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_1313 chrX 3670088 3670781 + 15 NA promoter-TSS (FBgn0263532) pre_miRNA-promoter-TSS (FBgn0263532) -1055 FBgn0263532 FBgn0263532 FBtr0309622 mir-4962 pre_miRNA CG8478-S2-modencode_R1_peak_534 chr2R 17592222 17592378 + 15 NA promoter-TSS (FBgn0010228) protein_coding-promoter-TSS (FBgn0010228) -1887 FBgn0010228 FBgn0010228 FBtr0071674 HmgZ protein_coding CG8478-S2-modencode_R1_peak_902 chr3R 5358870 5359192 + 15 NA promoter-TSS (FBgn0000244) protein_coding-promoter-TSS (FBgn0000244) -297 FBgn0000244 FBgn0000244 FBtr0301093 by protein_coding CG8478-S2-modencode_R1_peak_232 chr2R 2901726 2902005 + 15 NA intron (FBgn0029506, intron 2 of 4) protein_coding-intron (FBgn0029506, intron 2 of 4) 2104 FBgn0029506 FBgn0029506 FBtr0086180 Tsp42Ee protein_coding CG8478-S2-modencode_R1_peak_226 chr2R 2516718 2516887 + 15 NA intron (FBgn0262736, intron 2 of 3) protein_coding-intron (FBgn0262736, intron 2 of 3) 3084 FBgn0262736 FBgn0262736 FBtr0086153 Vha16-1 protein_coding CG8478-S2-modencode_R1_peak_76 chr2L 7993201 7993382 + 15 NA intron (FBgn0031969, intron 1 of 4) protein_coding-intron (FBgn0031969, intron 1 of 4) -1711 FBgn0031969 FBgn0031969 FBtr0331673 pes protein_coding CG8478-S2-modencode_R1_peak_425 chr2R 12471477 12471713 + 15 NA intron (FBgn0016131, intron 3 of 6) protein_coding-intron (FBgn0016131, intron 3 of 6) -2004 FBgn0003274 FBgn0003274 FBtr0087105 RpLP2 protein_coding CG8478-S2-modencode_R1_peak_1323 chrX 4001722 4001905 + 15 NA intron (FBgn0026084, intron 1 of 3) protein_coding-intron (FBgn0026084, intron 1 of 3) -1169 FBgn0026084 FBgn0026084 FBtr0307206 cib protein_coding CG8478-S2-modencode_R1_peak_1473 chrX 12561953 12562272 + 15 NA intron (FBgn0011837, intron 2 of 3) protein_coding-intron (FBgn0011837, intron 2 of 3) 8617 FBgn0053963 FBgn0053963 FBtr0100004 CR33963 ncRNA CG8478-S2-modencode_R1_peak_102 chr2L 10972448 10972554 + 15 NA promoter-TSS (FBgn0032322) protein_coding-promoter-TSS (FBgn0032322) 221 FBgn0032322 FBgn0032322 FBtr0080147 CG16743 protein_coding CG8478-S2-modencode_R1_peak_318 chr2R 6977236 6977395 + 15 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -3171 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_1573 chrX 21465202 21465403 + 15 NA Intergenic Intergenic 10414 FBgn0027588 FBgn0027588 FBtr0070062 CG14476 protein_coding CG8478-S2-modencode_R1_peak_571 chr2RHet 370114 370280 + 15 NA NA NA NA NA CG8478-S2-modencode_R1_peak_906 chr3R 5399416 5399693 + 15 NA promoter-TSS (FBgn0037715) protein_coding-promoter-TSS (FBgn0037715) 373 FBgn0037715 FBgn0037715 FBtr0082109 CG9399 protein_coding CG8478-S2-modencode_R1_peak_462 chr2R 14231187 14231425 + 15 NA intron (FBgn0010575, intron 1 of 10) protein_coding-intron (FBgn0010575, intron 1 of 11) 13495 FBgn0010575 FBgn0010575 FBtr0329996 sbb protein_coding CG8478-S2-modencode_R1_peak_608 chr3L 2417283 2417396 + 15 NA promoter-TSS (FBgn0261551) protein_coding-promoter-TSS (FBgn0261551) -616 FBgn0261551 FBgn0261551 FBtr0302675 CG42669 protein_coding CG8478-S2-modencode_R1_peak_1441 chrX 10380228 10380405 + 15 NA exon (FBgn0052687, exon 1 of 3) protein_coding-exon (FBgn0052687, exon 1 of 3) 344 FBgn0052687 FBgn0052687 FBtr0071458 CG32687 protein_coding CG8478-S2-modencode_R1_peak_679 chr3L 8434927 8435435 + 15 NA promoter-TSS (FBgn0263352) protein_coding-promoter-TSS (FBgn0263352) -3391 FBgn0263352 FBgn0263352 FBtr0076661 Unr protein_coding CG8478-S2-modencode_R1_peak_1378 chrX 7861789 7862005 + 15 NA exon (FBgn0003656, exon 1 of 11) protein_coding-exon (FBgn0003656, exon 1 of 11) 372 FBgn0003656 FBgn0003656 FBtr0071126 sws protein_coding CG8478-S2-modencode_R1_peak_1509 chrX 15706992 15707236 + 15 NA promoter-TSS (FBgn0003345) protein_coding-promoter-TSS (FBgn0003345) 752 FBgn0003345 FBgn0003345 FBtr0074101 sd protein_coding CG8478-S2-modencode_R1_peak_29 chr2L 1911118 1911210 + 15 NA promoter-TSS (FBgn0031374) protein_coding-promoter-TSS (FBgn0031374) 26542 FBgn0031374 FBgn0031374 FBtr0110882 CG7337 protein_coding CG8478-S2-modencode_R1_peak_840 chr3R 1833529 1833829 + 15 NA promoter-TSS (FBgn0003261) protein_coding-promoter-TSS (FBgn0003261) 622 FBgn0003261 FBgn0003261 FBtr0078654 Rm62 protein_coding CG8478-S2-modencode_R1_peak_1487 chrX 12984095 12984306 + 15 NA promoter-TSS (FBgn0261524) protein_coding-promoter-TSS (FBgn0261524) 266 FBgn0010303 FBgn0010303 FBtr0073748 hep protein_coding CG8478-S2-modencode_R1_peak_413 chr2R 11668547 11668717 + 15 NA intron (FBgn0083919, intron 5 of 15) protein_coding-intron (FBgn0083919, intron 5 of 15) 33818 FBgn0083919 FBgn0083919 FBtr0329910 Zasp52 protein_coding CG8478-S2-modencode_R1_peak_349 chr2R 7492115 7492325 + 15 NA intron (FBgn0033636, intron 1 of 15) protein_coding-intron (FBgn0033636, intron 1 of 16) 221 FBgn0033636 FBgn0033636 FBtr0088094 tou protein_coding CG8478-S2-modencode_R1_peak_628 chr3L 3406274 3406399 + 15 NA intron (FBgn0014388, intron 1 of 1) protein_coding-intron (FBgn0014388, intron 1 of 1) 5851 FBgn0262260 FBgn0262260 FBtr0304360 mir-2282 pre_miRNA CG8478-S2-modencode_R1_peak_1421 chrX 9583481 9583711 + 15 NA TTS (FBgn0261522) protein_coding-TTS (FBgn0261522) 1374 FBgn0261522 FBgn0261522 FBtr0302457 CG42657 protein_coding CG8478-S2-modencode_R1_peak_605 chr3L 1860961 1861176 + 15 NA exon (FBgn0004636, exon 2 of 2) protein_coding-exon (FBgn0004636, exon 2 of 2) 748 FBgn0004636 FBgn0004636 FBtr0332671 R protein_coding CG8478-S2-modencode_R1_peak_178 chr2L 20823982 20824138 + 15 NA promoter-TSS (FBgn0032889) protein_coding-promoter-TSS (FBgn0032889) -376 FBgn0032889 FBgn0032889 FBtr0081418 CG9331 protein_coding CG8478-S2-modencode_R1_peak_1199 chr3R 27246260 27246445 + 15 NA intron (FBgn0261988, intron 2 of 12) protein_coding-intron (FBgn0261988, intron 2 of 12) 15381 FBgn0261988 FBgn0261988 FBtr0085788 Gprk2 protein_coding CG8478-S2-modencode_R1_peak_836 chr3R 976271 976455 + 15 NA promoter-TSS (FBgn0037295) protein_coding-promoter-TSS (FBgn0037295) -8971 FBgn0037294 FBgn0037294 FBtr0078773 CG12590 protein_coding CG8478-S2-modencode_R1_peak_508 chr2R 15615562 15615814 + 15 NA promoter-TSS (FBgn0050220) tRNA-promoter-TSS (FBgn0050220) 76 FBgn0050454 FBgn0050454 FBtr0086445 tRNA:CR30454 tRNA CG8478-S2-modencode_R1_peak_403 chr2R 10210032 10210209 + 15 NA intron (FBgn0085408, intron 2 of 9) protein_coding-intron (FBgn0085408, intron 2 of 9) -9780 FBgn0085408 FBgn0085408 FBtr0112616 Shroom protein_coding CG8478-S2-modencode_R1_peak_1458 chrX 11583696 11583914 + 15 NA intron (FBgn0014133, intron 5 of 5) protein_coding-intron (FBgn0014133, intron 5 of 5) -5340 FBgn0011754 FBgn0011754 FBtr0301500 PhKgamma protein_coding CG8478-S2-modencode_R1_peak_222 chr2R 2109378 2109517 + 15 NA intron (FBgn0263144, intron 1 of 6) protein_coding-intron (FBgn0263144, intron 1 of 6) 903 FBgn0263144 FBgn0263144 FBtr0085993 bin3 protein_coding CG8478-S2-modencode_R1_peak_1516 chrX 16227067 16227602 + 15 NA promoter-TSS (FBgn0011764) protein_coding-promoter-TSS (FBgn0011764) 93 FBgn0030743 FBgn0030743 FBtr0074235 CG9921 protein_coding CG8478-S2-modencode_R1_peak_1309 chrX 3655174 3655801 + 15 NA intron (FBgn0086899, intron 2 of 9) protein_coding-intron (FBgn0086899, intron 2 of 9) -11186 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_466 chr2R 14287301 14287557 + 15 NA promoter-TSS (FBgn0063497) protein_coding-promoter-TSS (FBgn0063497) 431 FBgn0063498 FBgn0063498 FBtr0086670 GstE2 protein_coding CG8478-S2-modencode_R1_peak_492 chr2R 15141551 15141716 + 15 NA promoter-TSS (FBgn0053453) protein_coding-promoter-TSS (FBgn0053453) -943 FBgn0053453 FBgn0053453 FBtr0086564 CG33453 protein_coding CG8478-S2-modencode_R1_peak_624 chr3L 3252023 3252262 + 15 NA TTS (FBgn0263617) ncRNA-TTS (FBgn0263617) 1104 FBgn0262368 FBgn0262368 FBtr0304175 mir-282 pre_miRNA CG8478-S2-modencode_R1_peak_821 chr3L 22941374 22941958 + 15 NA intron (FBgn0037207, intron 2 of 2) protein_coding-intron (FBgn0037207, intron 2 of 2) 2571 FBgn0037207 FBgn0037207 FBtr0078563 Mes2 protein_coding CG8478-S2-modencode_R1_peak_819 chr3L 22926782 22926881 + 15 NA Intergenic Intergenic -12264 FBgn0037207 FBgn0037207 FBtr0078563 Mes2 protein_coding CG8478-S2-modencode_R1_peak_168 chr2L 19398879 19399028 + 15 NA promoter-TSS (FBgn0032775) protein_coding-promoter-TSS (FBgn0032775) -461 FBgn0032775 FBgn0032775 FBtr0300822 CG17544 protein_coding CG8478-S2-modencode_R1_peak_626 chr3L 3400930 3401076 + 15 NA TTS (FBgn0014388) protein_coding-TTS (FBgn0014388) 11184 FBgn0262260 FBgn0262260 FBtr0304360 mir-2282 pre_miRNA CG8478-S2-modencode_R1_peak_350 chr2R 7501925 7502207 + 15 NA intron (FBgn0033636, intron 1 of 16) protein_coding-intron (FBgn0033636, intron 1 of 16) -1634 FBgn0264508 FBgn0264508 FBtr0333069 CR43907 ncRNA CG8478-S2-modencode_R1_peak_1544 chrX 19192469 19192669 + 15 NA promoter-TSS (FBgn0031011) protein_coding-promoter-TSS (FBgn0031011) 3337 FBgn0065084 FBgn0065084 FBtr0091699 snmRNA:763 ncRNA CG8478-S2-modencode_R1_peak_1088 chr3R 19172834 19173009 + 15 NA promoter-TSS (FBgn0264326) protein_coding-promoter-TSS (FBgn0264326) -929 FBgn0264326 FBgn0264326 FBtr0084408 DNApol-epsilon protein_coding CG8478-S2-modencode_R1_peak_1395 chrX 9225583 9225989 + 15 NA intron (FBgn0085478, intron 9 of 11) protein_coding-intron (FBgn0085478, intron 9 of 10) -1266 FBgn0085479 FBgn0085479 FBtr0112756 CG34450 protein_coding CG8478-S2-modencode_R1_peak_1559 chrX 20102573 20102991 + 15 NA intron (FBgn0003654, intron 4 of 6) protein_coding-intron (FBgn0003654, intron 5 of 7) 4674 FBgn0003654 FBgn0003654 FBtr0089409 sw protein_coding CG8478-S2-modencode_R1_peak_7 chr2L 248909 249389 + 15 NA intron (FBgn0086902, intron 1 of 16) protein_coding-intron (FBgn0086902, intron 1 of 17) 1674 FBgn0086902 FBgn0086902 FBtr0078145 kis protein_coding CG8478-S2-modencode_R1_peak_101 chr2L 10500249 10500864 + 15 NA intron (FBgn0086347, intron 2 of 9) protein_coding-intron (FBgn0086347, intron 2 of 9) 6222 FBgn0086347 FBgn0086347 FBtr0304138 Myo31DF protein_coding CG8478-S2-modencode_R1_peak_715 chr3L 12259182 12259405 + 15 NA intron (FBgn0260941, intron 1 of 9) protein_coding-intron (FBgn0260941, intron 1 of 9) -1335 FBgn0052100 FBgn0052100 FBtr0076006 CG32100 protein_coding CG8478-S2-modencode_R1_peak_742 chr3L 16019283 16019447 + 15 NA intron (FBgn0044028, intron 1 of 3) protein_coding-intron (FBgn0044028, intron 1 of 3) 2785 FBgn0044028 FBgn0044028 FBtr0075435 Notum protein_coding CG8478-S2-modencode_R1_peak_1332 chrX 4803067 4803328 + 15 NA promoter-TSS (FBgn0052772) protein_coding-promoter-TSS (FBgn0052772) 16 FBgn0052772 FBgn0052772 FBtr0300997 CG32772 protein_coding CG8478-S2-modencode_R1_peak_120 chr2L 12520376 12520609 + 15 NA intron (FBgn0259176, intron 5 of 7) protein_coding-intron (FBgn0259176, intron 5 of 7) 12384 FBgn0263458 FBgn0263458 FBtr0309757 snoRNA:CG43051-a snoRNA CG8478-S2-modencode_R1_peak_1244 chrUextra 12442405 12442629 + 15 NA NA NA NA NA CG8478-S2-modencode_R1_peak_580 chr3L 549816 550033 + 15 NA intron (FBgn0035142, intron 2 of 10) protein_coding-intron (FBgn0035142, intron 2 of 10) -6993 FBgn0035141 FBgn0035141 FBtr0072564 Cypl protein_coding CG8478-S2-modencode_R1_peak_1048 chr3R 16849822 16850217 + 15 NA promoter-TSS (FBgn0046763) protein_coding-promoter-TSS (FBgn0046763) -134 FBgn0046763 FBgn0046763 FBtr0084047 CG17278 protein_coding CG8478-S2-modencode_R1_peak_10 chr2L 495108 495249 + 15 NA intron (FBgn0003963, intron 2 of 8) protein_coding-intron (FBgn0003963, intron 1 of 7) -15490 FBgn0043364 FBgn0043364 FBtr0310030 cbt protein_coding CG8478-S2-modencode_R1_peak_152 chr2L 16534920 16535190 + 15 NA Intergenic Intergenic -6133 FBgn0086038 FBgn0086038 FBtr0114314 snoRNA:Me28S-C1237 snoRNA CG8478-S2-modencode_R1_peak_115 chr2L 12461431 12461560 + 15 NA promoter-TSS (FBgn0259176) protein_coding-promoter-TSS (FBgn0259176) -1405 FBgn0262203 FBgn0262203 FBtr0304239 mir-967 pre_miRNA CG8478-S2-modencode_R1_peak_829 chr3R 83933 84094 + 14 NA exon (FBgn0041621, exon 5 of 6) protein_coding-exon (FBgn0041621, exon 5 of 6) 1319 FBgn0041621 FBgn0041621 FBtr0078977 Or82a protein_coding CG8478-S2-modencode_R1_peak_171 chr2L 19570520 19570664 + 14 NA promoter-TSS (FBgn0262377) pre_miRNA-promoter-TSS (FBgn0262377) -336 FBgn0262449 FBgn0262449 FBtr0309745 mir-2b-2 pre_miRNA CG8478-S2-modencode_R1_peak_1308 chrX 3645897 3646440 + 14 NA intron (FBgn0086899, intron 2 of 9) protein_coding-intron (FBgn0086899, intron 2 of 9) -20505 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_1218 chr4 1270697 1271131 + 14 NA intron (FBgn0053653, intron 21 of 22) protein_coding-intron (FBgn0053653, intron 22 of 23) 36351 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_730 chr3L 14267127 14267410 + 14 NA promoter-TSS (FBgn0001085) protein_coding-promoter-TSS (FBgn0001085) -175 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding CG8478-S2-modencode_R1_peak_637 chr3L 3456831 3456947 + 14 NA intron (FBgn0026259, intron 4 of 8) protein_coding-intron (FBgn0026259, intron 4 of 8) 4088 FBgn0026259 FBgn0026259 FBtr0073144 eIF5B protein_coding CG8478-S2-modencode_R1_peak_562 chr2R 19761073 19761285 + 14 NA intron (FBgn0011236, intron 1 of 2) protein_coding-intron (FBgn0011236, intron 1 of 2) 3383 FBgn0011236 FBgn0011236 FBtr0072129 ken protein_coding CG8478-S2-modencode_R1_peak_302 chr2R 6488179 6488359 + 14 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) -21439 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_1438 chrX 10358034 10358281 + 14 NA exon (FBgn0261710, exon 6 of 6) protein_coding-exon (FBgn0261710, exon 6 of 6) 3388 FBgn0083167 FBgn0083167 FBtr0071449 Neb-cGP protein_coding CG8478-S2-modencode_R1_peak_284 chr2R 6364173 6364283 + 14 NA intron (FBgn0261862, intron 1 of 8) protein_coding-intron (FBgn0261862, intron 1 of 8) -1245 FBgn0261862 FBgn0261862 FBtr0301282 whd protein_coding CG8478-S2-modencode_R1_peak_1025 chr3R 14074993 14075147 + 14 NA TTS (FBgn0020238) protein_coding-TTS (FBgn0020238) -1766 FBgn0038589 FBgn0038589 FBtr0083569 CG18598 protein_coding CG8478-S2-modencode_R1_peak_970 chr3R 10972600 10972946 + 14 NA promoter-TSS (FBgn0038293) protein_coding-promoter-TSS (FBgn0038293) 56 FBgn0038293 FBgn0038293 FBtr0083037 CG6904 protein_coding CG8478-S2-modencode_R1_peak_1260 chrX 1841998 1842160 + 14 NA intron (FBgn0264562, intron 2 of 11) protein_coding-intron (FBgn0264562, intron 2 of 11) 6106 FBgn0264562 FBgn0264562 FBtr0333339 Hr4 protein_coding CG8478-S2-modencode_R1_peak_1222 chr4 1277008 1277616 + 14 NA Intergenic Intergenic 42749 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_770 chr3L 17955637 17955810 + 14 NA promoter-TSS (FBgn0000568) protein_coding-promoter-TSS (FBgn0000568) 28591 FBgn0262793 FBgn0262793 FBtr0305909 CG43174 protein_coding CG8478-S2-modencode_R1_peak_1352 chrX 6689951 6690275 + 14 NA promoter-TSS (FBgn0259228) protein_coding-promoter-TSS (FBgn0259228) 7466 FBgn0259228 FBgn0259228 FBtr0299795 C3G protein_coding CG8478-S2-modencode_R1_peak_553 chr2R 19505453 19505550 + 14 NA Intergenic Intergenic -8875 FBgn0034885 FBgn0034885 FBtr0306384 CG4019 protein_coding CG8478-S2-modencode_R1_peak_992 chr3R 12072890 12073065 + 14 NA intron (FBgn0040071, intron 1 of 1) protein_coding-intron (FBgn0040071, intron 1 of 1) 4436 FBgn0040071 FBgn0040071 FBtr0083258 tara protein_coding CG8478-S2-modencode_R1_peak_358 chr2R 7549510 7549688 + 14 NA intron (FBgn0044020, intron 3 of 3) protein_coding-intron (FBgn0044020, intron 2 of 2) -1459 FBgn0011916 FBgn0011916 FBtr0088086 tRNA:M2:48Bb tRNA CG8478-S2-modencode_R1_peak_72 chr2L 7961280 7961543 + 14 NA intron (FBgn0085450, intron 1 of 1) protein_coding-intron (FBgn0085450, intron 1 of 1) 15654 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding CG8478-S2-modencode_R1_peak_977 chr3R 11727074 11727211 + 14 NA promoter-TSS (FBgn0027657) protein_coding-promoter-TSS (FBgn0027657) 1084 FBgn0027657 FBgn0027657 FBtr0300895 glob1 protein_coding CG8478-S2-modencode_R1_peak_183 chr2L 21397266 21397529 + 14 NA Intergenic Intergenic -6718 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene CG8478-S2-modencode_R1_peak_106 chr2L 11447101 11447241 + 14 NA Intergenic Intergenic -1568 FBgn0261648 FBgn0261648 FBtr0089913 salm protein_coding CG8478-S2-modencode_R1_peak_128 chr2L 13513712 13513838 + 14 NA intron (FBgn0023407, intron 3 of 6) protein_coding-intron (FBgn0023407, intron 3 of 6) -14066 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding CG8478-S2-modencode_R1_peak_116 chr2L 12475388 12475874 + 14 NA intron (FBgn0259176, intron 2 of 2) protein_coding-intron (FBgn0259176, intron 2 of 2) -15541 FBgn0262203 FBgn0262203 FBtr0304239 mir-967 pre_miRNA CG8478-S2-modencode_R1_peak_796 chr3L 19071442 19072012 + 14 NA intron (FBgn0036844, intron 1 of 4) protein_coding-intron (FBgn0036844, intron 1 of 4) 7799 FBgn0036844 FBgn0036844 FBtr0075035 Mkp3 protein_coding CG8478-S2-modencode_R1_peak_572 chr3L 128164 128471 + 14 NA Intergenic Intergenic -1133 FBgn0020386 FBgn0020386 FBtr0072471 Pdk1 protein_coding CG8478-S2-modencode_R1_peak_627 chr3L 3405537 3405839 + 14 NA intron (FBgn0014388, intron 1 of 1) protein_coding-intron (FBgn0014388, intron 1 of 1) 6499 FBgn0262260 FBgn0262260 FBtr0304360 mir-2282 pre_miRNA CG8478-S2-modencode_R1_peak_631 chr3L 3417208 3417366 + 14 NA exon (FBgn0014388, exon 1 of 2) protein_coding-exon (FBgn0014388, exon 1 of 2) 640 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding CG8478-S2-modencode_R1_peak_435 chr2R 12896106 12896335 + 14 NA TTS (FBgn0034180) protein_coding-TTS (FBgn0034180) 3262 FBgn0034179 FBgn0034179 FBtr0306574 CG6805 protein_coding CG8478-S2-modencode_R1_peak_382 chr2R 9110762 9111015 + 14 NA promoter-TSS (FBgn0043010) protein_coding-promoter-TSS (FBgn0043010) -208 FBgn0011763 FBgn0011763 FBtr0087741 Dp protein_coding CG8478-S2-modencode_R1_peak_1175 chr3R 26123337 26123539 + 14 NA intron (FBgn0010113, intron 1 of 5) protein_coding-intron (FBgn0010113, intron 1 of 5) 8921 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_689 chr3L 9840273 9840544 + 14 NA intron (FBgn0004390, intron 1 of 4) protein_coding-intron (FBgn0004390, intron 1 of 4) 7977 FBgn0004390 FBgn0004390 FBtr0330168 Gap1 protein_coding CG8478-S2-modencode_R1_peak_560 chr2R 19752159 19752365 + 14 NA promoter-TSS (FBgn0034919) protein_coding-promoter-TSS (FBgn0034919) 655 FBgn0025335 FBgn0025335 FBtr0072227 CG4585 protein_coding CG8478-S2-modencode_R1_peak_451 chr2R 13742095 13742232 + 14 NA promoter-TSS (FBgn0041585) protein_coding-promoter-TSS (FBgn0041585) -847 FBgn0041585 FBgn0041585 FBtr0114614 olf186-F protein_coding CG8478-S2-modencode_R1_peak_523 chr2R 17254907 17255138 + 14 NA intron (FBgn0000395, intron 1 of 6) protein_coding-intron (FBgn0000395, intron 1 of 6) 11945 FBgn0000395 FBgn0000395 FBtr0071610 cv-2 protein_coding CG8478-S2-modencode_R1_peak_1104 chr3R 20047345 20047608 + 14 NA promoter-TSS (FBgn0026257) protein_coding-promoter-TSS (FBgn0026257) 211 FBgn0011725 FBgn0011725 FBtr0084567 twin protein_coding CG8478-S2-modencode_R1_peak_1184 chr3R 26287602 26287840 + 14 NA intron (FBgn0039774, intron 1 of 6) protein_coding-intron (FBgn0039774, intron 1 of 5) 2478 FBgn0039774 FBgn0039774 FBtr0085649 CDase protein_coding CG8478-S2-modencode_R1_peak_1517 chrX 16267530 16267669 + 14 NA intron (FBgn0004598, intron 1 of 15) protein_coding-intron (FBgn0004598, intron 1 of 15) 478 FBgn0004598 FBgn0004598 FBtr0074265 Fur2 protein_coding CG8478-S2-modencode_R1_peak_552 chr2R 18821577 18821896 + 14 NA promoter-TSS (FBgn0034800) protein_coding-promoter-TSS (FBgn0034800) -136 FBgn0034800 FBgn0034800 FBtr0071995 CG3788 protein_coding CG8478-S2-modencode_R1_peak_1511 chrX 15761967 15762055 + 14 NA promoter-TSS (FBgn0001092) protein_coding-promoter-TSS (FBgn0001092) -233 FBgn0001092 FBgn0001092 FBtr0332618 Gapdh2 protein_coding CG8478-S2-modencode_R1_peak_1095 chr3R 19840320 19840484 + 14 NA intron (FBgn0020647, intron 2 of 10) protein_coding-intron (FBgn0020647, intron 2 of 11) -8652 FBgn0020647 FBgn0020647 FBtr0301419 KrT95D protein_coding CG8478-S2-modencode_R1_peak_301 chr2R 6456939 6457412 + 14 NA promoter-TSS (FBgn0263102) protein_coding-promoter-TSS (FBgn0263102) 11782 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_458 chr2R 14175882 14176175 + 14 NA promoter-TSS (FBgn0034321) protein_coding-promoter-TSS (FBgn0034321) -565 FBgn0034321 FBgn0034321 FBtr0086757 CG14502 protein_coding CG8478-S2-modencode_R1_peak_1457 chrX 11575783 11575955 + 14 NA exon (FBgn0014133, exon 3 of 6) protein_coding-exon (FBgn0014133, exon 3 of 6) 2841 FBgn0014133 FBgn0014133 FBtr0073526 bif protein_coding CG8478-S2-modencode_R1_peak_561 chr2R 19759568 19760511 + 14 NA intron (FBgn0011236, intron 1 of 2) protein_coding-intron (FBgn0011236, intron 1 of 2) 2243 FBgn0011236 FBgn0011236 FBtr0072129 ken protein_coding CG8478-S2-modencode_R1_peak_1174 chr3R 26108349 26108565 + 14 NA intron (FBgn0010113, intron 1 of 5) protein_coding-intron (FBgn0010113, intron 1 of 5) 4801 FBgn0010113 FBgn0010113 FBtr0085620 hdc protein_coding CG8478-S2-modencode_R1_peak_914 chr3R 5909304 5909582 + 14 NA Intergenic Intergenic -7460 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_808 chr3L 21196091 21196258 + 14 NA promoter-TSS (FBgn0053056) protein_coding-promoter-TSS (FBgn0053056) -192 FBgn0053054 FBgn0053054 FBtr0078316 CG33054 protein_coding CG8478-S2-modencode_R1_peak_1262 chrX 1964339 1964504 + 14 NA TTS (FBgn0025627) protein_coding-TTS (FBgn0025627) 1794 FBgn0025627 FBgn0025627 FBtr0070328 CG4194 protein_coding CG8478-S2-modencode_R1_peak_870 chr3R 4400980 4401098 + 14 NA Intergenic Intergenic -2888 FBgn0261929 FBgn0261929 FBtr0330144 CG42796 protein_coding CG8478-S2-modencode_R1_peak_1562 chrX 20663160 20663317 + 14 NA intron (FBgn0085387, intron 7 of 11) protein_coding-intron (FBgn0085387, intron 4 of 8) -10991 FBgn0052507 FBgn0052507 FBtr0302987 CG32507 protein_coding CG8478-S2-modencode_R1_peak_600 chr3L 1336341 1336535 + 14 NA intron (FBgn0010786, intron 2 of 3) protein_coding-intron (FBgn0010786, intron 2 of 3) 1549 FBgn0010786 FBgn0010786 FBtr0072679 l(3)02640 protein_coding CG8478-S2-modencode_R1_peak_964 chr3R 10556792 10557037 + 14 NA promoter-TSS (FBgn0038256) protein_coding-promoter-TSS (FBgn0038256) -2114 FBgn0038256 FBgn0038256 FBtr0333277 CG7530 protein_coding CG8478-S2-modencode_R1_peak_202 chr2R 1308317 1308559 + 14 NA intron (FBgn0259247, intron 1 of 7) protein_coding-intron (FBgn0259247, intron 1 of 7) 4581 FBgn0259247 FBgn0259247 FBtr0301063 laccase2 protein_coding CG8478-S2-modencode_R1_peak_312 chr2R 6960354 6960482 + 14 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -12673 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_64 chr2L 7024002 7024360 + 14 NA promoter-TSS (FBgn0000053) protein_coding-promoter-TSS (FBgn0000053) -241 FBgn0000053 FBgn0000053 FBtr0100353 ade3 protein_coding CG8478-S2-modencode_R1_peak_958 chr3R 10196029 10196143 + 14 NA promoter-TSS (FBgn0024321) protein_coding-promoter-TSS (FBgn0024321) -732 FBgn0024321 FBgn0024321 FBtr0306742 NK7.1 protein_coding CG8478-S2-modencode_R1_peak_644 chr3L 4239501 4239907 + 14 NA promoter-TSS (FBgn0035515) protein_coding-promoter-TSS (FBgn0035515) -604 FBgn0035515 FBgn0035515 FBtr0073226 CG14997 protein_coding CG8478-S2-modencode_R1_peak_635 chr3L 3447610 3448375 + 14 NA intron (FBgn0026259, intron 4 of 8) protein_coding-intron (FBgn0026259, intron 4 of 8) 12985 FBgn0026259 FBgn0026259 FBtr0073144 eIF5B protein_coding CG8478-S2-modencode_R1_peak_1019 chr3R 13526104 13526363 + 14 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) -13450 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding CG8478-S2-modencode_R1_peak_844 chr3R 2236031 2236191 + 14 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 3532 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding CG8478-S2-modencode_R1_peak_160 chr2L 18655941 18656090 + 14 NA intron (FBgn0032694, intron 2 of 2) protein_coding-intron (FBgn0032694, intron 3 of 3) -3016 FBgn0032693 FBgn0032693 FBtr0081077 Cyp310a1 protein_coding CG8478-S2-modencode_R1_peak_17 chr2L 1420196 1420657 + 14 NA promoter-TSS (FBgn0002543) protein_coding-promoter-TSS (FBgn0002543) 23 FBgn0002543 FBgn0002543 FBtr0329985 lea protein_coding CG8478-S2-modencode_R1_peak_1103 chr3R 20046766 20047003 + 14 NA promoter-TSS (FBgn0026257) protein_coding-promoter-TSS (FBgn0026257) 803 FBgn0011725 FBgn0011725 FBtr0084567 twin protein_coding CG8478-S2-modencode_R1_peak_1518 chrX 16315948 16316080 + 14 NA promoter-TSS (FBgn0026575) protein_coding-promoter-TSS (FBgn0026575) 261 FBgn0030749 FBgn0030749 FBtr0074303 Anxb11 protein_coding CG8478-S2-modencode_R1_peak_1338 chrX 5629675 5629836 + 14 NA intron (FBgn0052758, intron 1 of 5) protein_coding-intron (FBgn0052758, intron 1 of 5) 2971 FBgn0029795 FBgn0029795 FBtr0070806 CG15773 protein_coding CG8478-S2-modencode_R1_peak_997 chr3R 12249094 12249283 + 14 NA Intergenic Intergenic 1594 FBgn0051497 FBgn0051497 FBtr0083317 tRNA:CR31497 tRNA CG8478-S2-modencode_R1_peak_762 chr3L 17571910 17572076 + 14 NA intron (FBgn0000567, intron 5 of 7) protein_coding-intron (FBgn0000567, intron 5 of 7) -12731 FBgn0086080 FBgn0086080 FBtr0114356 snoRNA:Me28S-A576 snoRNA CG8478-S2-modencode_R1_peak_303 chr2R 6488655 6488900 + 14 NA intron (FBgn0263102, intron 1 of 6) protein_coding-intron (FBgn0263102, intron 3 of 9) -20931 FBgn0033538 FBgn0033538 FBtr0113063 CG11883 protein_coding CG8478-S2-modencode_R1_peak_1033 chr3R 14744132 14744327 + 14 NA promoter-TSS (FBgn0261113) protein_coding-promoter-TSS (FBgn0261113) 18 FBgn0261113 FBgn0261113 FBtr0083703 Xrp1 protein_coding CG8478-S2-modencode_R1_peak_728 chr3L 14194199 14194362 + 14 NA intron (FBgn0013718, intron 4 of 10) protein_coding-intron (FBgn0013718, intron 4 of 9) -2143 FBgn0052141 FBgn0052141 FBtr0075735 CG32141 protein_coding CG8478-S2-modencode_R1_peak_173 chr2L 20084739 20084986 + 14 NA exon (FBgn0263773, exon 1 of 2) protein_coding-exon (FBgn0263773, exon 1 of 2) -4666 FBgn0263773 FBgn0263773 FBtr0310558 fok protein_coding CG8478-S2-modencode_R1_peak_1015 chr3R 13441247 13441391 + 14 NA TTS (FBgn0038526) protein_coding-TTS (FBgn0038526) 1759 FBgn0038526 FBgn0038526 FBtr0083465 CG14327 protein_coding CG8478-S2-modencode_R1_peak_764 chr3L 17607120 17607323 + 14 NA intron (FBgn0000567, intron 1 of 7) protein_coding-intron (FBgn0000567, intron 1 of 7) 5204 FBgn0000567 FBgn0000567 FBtr0075204 Eip74EF protein_coding CG8478-S2-modencode_R1_peak_612 chr3L 2633798 2633908 + 14 NA intron (FBgn0250911, intron 3 of 8) protein_coding-intron (FBgn0035357, intron 3 of 8) 2138 FBgn0250911 FBgn0250911 FBtr0290341 CG42245 protein_coding CG8478-S2-modencode_R1_peak_133 chr2L 13640827 13641045 + 14 NA intron (FBgn0028546, intron 3 of 4) protein_coding-intron (FBgn0028546, intron 3 of 4) 1424 FBgn0028546 FBgn0028546 FBtr0080511 ics protein_coding CG8478-S2-modencode_R1_peak_254 chr2R 4124925 4125232 + 14 NA promoter-TSS (FBgn0013726) protein_coding-promoter-TSS (FBgn0013726) -286 FBgn0013726 FBgn0013726 FBtr0088793 pnut protein_coding CG8478-S2-modencode_R1_peak_103 chr2L 11000279 11000395 + 14 NA exon (FBgn0000146, exon 3 of 9) protein_coding-exon (FBgn0000146, exon 3 of 9) 667 FBgn0000146 FBgn0000146 FBtr0112793 aub protein_coding CG8478-S2-modencode_R1_peak_865 chr3R 3789330 3789423 + 14 NA promoter-TSS (FBgn0000504) protein_coding-promoter-TSS (FBgn0000504) 3754 FBgn0000504 FBgn0000504 FBtr0081761 dsx protein_coding CG8478-S2-modencode_R1_peak_481 chr2R 14559549 14559752 + 14 NA intron (FBgn0023214, intron 1 of 1) protein_coding-intron (FBgn0023214, intron 1 of 1) 1387 FBgn0023214 FBgn0023214 FBtr0086652 edl protein_coding CG8478-S2-modencode_R1_peak_1425 chrX 9746710 9746937 + 14 NA Intergenic Intergenic -12428 FBgn0019929 FBgn0019929 FBtr0071387 Ser7 protein_coding CG8478-S2-modencode_R1_peak_1130 chr3R 21868988 21869107 + 14 NA exon (FBgn0001139, exon 2 of 13) protein_coding-exon (FBgn0001139, exon 2 of 13) 1615 FBgn0001139 FBgn0001139 FBtr0084965 gro protein_coding CG8478-S2-modencode_R1_peak_1362 chrX 7529536 7529637 + 14 NA intron (FBgn0004198, intron 2 of 7) protein_coding-intron (FBgn0004198, intron 1 of 6) 26405 FBgn0004198 FBgn0004198 FBtr0071069 ct protein_coding CG8478-S2-modencode_R1_peak_132 chr2L 13614978 13615094 + 14 NA intron (FBgn0259984, intron 5 of 11) protein_coding-intron (FBgn0259984, intron 5 of 12) 5001 FBgn0262194 FBgn0262194 FBtr0304220 mir-2489 pre_miRNA CG8478-S2-modencode_R1_peak_150 chr2L 16511844 16511959 + 14 NA intron (FBgn0032587, intron 2 of 2) protein_coding-intron (FBgn0032587, intron 2 of 2) 8276 FBgn0032587 FBgn0032587 FBtr0301144 CG5953 protein_coding CG8478-S2-modencode_R1_peak_285 chr2R 6402934 6403164 + 14 NA exon (FBgn0005630, exon 7 of 7) protein_coding-exon (FBgn0005630, exon 7 of 7) 19534 FBgn0005630 FBgn0005630 FBtr0089362 lola protein_coding CG8478-S2-modencode_R1_peak_1105 chr3R 20056538 20057083 + 14 NA intron (FBgn0043884, intron 1 of 17) protein_coding-intron (FBgn0043884, intron 1 of 16) 526 FBgn0043884 FBgn0043884 FBtr0084563 mask protein_coding CG8478-S2-modencode_R1_peak_335 chr2R 7084798 7085128 + 14 NA promoter-TSS (FBgn0003396) protein_coding-promoter-TSS (FBgn0003396) 21806 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding CG8478-S2-modencode_R1_peak_1343 chrX 5798452 5798814 + 14 NA TTS (FBgn0000042) protein_coding-TTS (FBgn0000042) -1146 FBgn0029821 FBgn0029821 FBtr0070824 CG4020 protein_coding CG8478-S2-modencode_R1_peak_520 chr2R 16963386 16963719 + 14 NA promoter-TSS (FBgn0003748) protein_coding-promoter-TSS (FBgn0003748) 382 FBgn0003748 FBgn0003748 FBtr0071540 Treh protein_coding CG8478-S2-modencode_R1_peak_685 chr3L 9444703 9444831 + 14 NA promoter-TSS (FBgn0052038) protein_coding-promoter-TSS (FBgn0052038) -95 FBgn0035996 FBgn0035996 FBtr0076476 CG3448 protein_coding CG8478-S2-modencode_R1_peak_522 chr2R 17200737 17200907 + 14 NA promoter-TSS (FBgn0034618) protein_coding-promoter-TSS (FBgn0034618) 913 FBgn0034618 FBgn0034618 FBtr0071601 CG9485 protein_coding CG8478-S2-modencode_R1_peak_1145 chr3R 22696963 22697055 + 14 NA TTS (FBgn0004903) protein_coding-TTS (FBgn0004903) 729 FBgn0026562 FBgn0026562 FBtr0085094 BM-40-SPARC protein_coding CG8478-S2-modencode_R1_peak_735 chr3L 15100163 15100344 + 14 NA TTS (FBgn0264702) ncRNA-TTS (FBgn0264702) 1271 FBgn0262707 FBgn0262707 FBtr0075635 CTPsyn protein_coding CG8478-S2-modencode_R1_peak_818 chr3L 22828530 22828797 + 14 NA promoter-TSS (FBgn0027339) protein_coding-promoter-TSS (FBgn0027339) -1505 FBgn0037195 FBgn0037195 FBtr0078546 CG11226 protein_coding CG8478-S2-modencode_R1_peak_898 chr3R 5246565 5246773 + 14 NA intron (FBgn0261552, intron 1 of 6) protein_coding-intron (FBgn0261552, intron 2 of 7) 3005 FBgn0261552 FBgn0261552 FBtr0302691 ps protein_coding CG8478-S2-modencode_R1_peak_353 chr2R 7514164 7514402 + 14 NA intron (FBgn0033638, intron 2 of 7) protein_coding-intron (FBgn0033638, intron 2 of 7) -7755 FBgn0086712 FBgn0086712 FBtr0088090 Egm protein_coding CG8478-S2-modencode_R1_peak_1413 chrX 9516444 9516532 + 14 NA TTS (FBgn0261931) protein_coding-TTS (FBgn0261931) 6397 FBgn0261931 FBgn0261931 FBtr0303709 CG42797 protein_coding CG8478-S2-modencode_R1_peak_951 chr3R 9470757 9471160 + 14 NA intron (FBgn0263396, intron 1 of 8) protein_coding-intron (FBgn0263396, intron 1 of 4) 1068 FBgn0263396 FBgn0263396 FBtr0082854 sqd protein_coding CG8478-S2-modencode_R1_peak_234 chr2R 3141497 3141585 + 14 NA Intergenic Intergenic 4873 FBgn0033153 FBgn0033153 FBtr0089049 Gadd45 protein_coding CG8478-S2-modencode_R1_peak_217 chr2R 2033039 2033662 + 14 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) -3401 FBgn0011891 FBgn0011891 FBtr0086017 tRNA:K2:42Ae tRNA CG8478-S2-modencode_R1_peak_990 chr3R 12048641 12048913 + 14 NA Intergenic Intergenic -17804 FBgn0010438 FBgn0010438 FBtr0083277 mtSSB protein_coding CG8478-S2-modencode_R1_peak_1111 chr3R 20398367 20399007 + 14 NA promoter-TSS (FBgn0039209) protein_coding-promoter-TSS (FBgn0039209) 4488 FBgn0039209 FBgn0039209 FBtr0084675 CG13624 protein_coding CG8478-S2-modencode_R1_peak_1202 chr4 68629 68795 + 14 NA exon (FBgn0004859, exon 6 of 6) protein_coding-exon (FBgn0004859, exon 6 of 6) -4308 FBgn0025740 FBgn0025740 FBtr0089179 plexB protein_coding CG8478-S2-modencode_R1_peak_157 chr2L 17472602 17472754 + 14 NA promoter-TSS (FBgn0032640) protein_coding-promoter-TSS (FBgn0032640) 537 FBgn0000183 FBgn0000183 FBtr0305688 BicD protein_coding CG8478-S2-modencode_R1_peak_1061 chr3R 17482961 17483174 + 14 NA intron (FBgn0011766, intron 1 of 7) protein_coding-intron (FBgn0011766, intron 1 of 7) 5613 FBgn0038893 FBgn0038893 FBtr0084116 CG6353 protein_coding CG8478-S2-modencode_R1_peak_887 chr3R 5055796 5056012 + 14 NA intron (FBgn0003165, intron 3 of 12) protein_coding-intron (FBgn0003165, intron 3 of 12) 10085 FBgn0000412 FBgn0000412 FBtr0301524 D1 protein_coding CG8478-S2-modencode_R1_peak_1071 chr3R 19016098 19016247 + 14 NA promoter-TSS (FBgn0262975) protein_coding-promoter-TSS (FBgn0262975) 13584 FBgn0011596 FBgn0011596 FBtr0084399 fzo protein_coding CG8478-S2-modencode_R1_peak_710 chr3L 11485425 11485923 + 14 NA intron (FBgn0036165, intron 1 of 3) protein_coding-intron (FBgn0036165, intron 1 of 3) 5024 FBgn0036165 FBgn0036165 FBtr0076093 chrb protein_coding CG8478-S2-modencode_R1_peak_324 chr2R 6981311 6981482 + 14 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -7252 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_315 chr2R 6971694 6971976 + 14 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -1256 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_1161 chr3R 25081032 25081435 + 14 NA exon (FBgn0003525, exon 1 of 2) protein_coding-exon (FBgn0003525, exon 1 of 2) 269 FBgn0003525 FBgn0003525 FBtr0085397 stg protein_coding CG8478-S2-modencode_R1_peak_907 chr3R 5418300 5418403 + 14 NA intron (FBgn0037720, intron 1 of 4) protein_coding-intron (FBgn0037720, intron 1 of 4) -1642 FBgn0037719 FBgn0037719 FBtr0100537 bocksbeutel protein_coding CG8478-S2-modencode_R1_peak_1387 chrX 8602075 8602248 + 14 NA Intergenic Intergenic -1524 FBgn0041629 FBgn0041629 FBtr0071249 Hexo2 protein_coding CG8478-S2-modencode_R1_peak_1269 chrX 2195605 2195969 + 14 NA intron (FBgn0003079, intron 2 of 5) protein_coding-intron (FBgn0003079, intron 2 of 5) 5870 FBgn0003079 FBgn0003079 FBtr0111025 phl protein_coding CG8478-S2-modencode_R1_peak_87 chr2L 8672514 8672748 + 14 NA promoter-TSS (FBgn0001114) protein_coding-promoter-TSS (FBgn0001114) -521 FBgn0001114 FBgn0001114 FBtr0307091 Glt protein_coding CG8478-S2-modencode_R1_peak_873 chr3R 4573696 4573921 + 14 NA promoter-TSS (FBgn0037623) protein_coding-promoter-TSS (FBgn0037623) 280 FBgn0037624 FBgn0037624 FBtr0081915 CG8223 protein_coding CG8478-S2-modencode_R1_peak_767 chr3L 17906569 17906726 + 14 NA promoter-TSS (FBgn0036772) protein_coding-promoter-TSS (FBgn0036772) -982 FBgn0036772 FBgn0036772 FBtr0075152 CG5290 protein_coding CG8478-S2-modencode_R1_peak_1526 chrX 16501904 16502194 + 14 NA intron (FBgn0061200, intron 6 of 6) protein_coding-intron (FBgn0061200, intron 7 of 7) 1855 FBgn0263538 FBgn0263538 FBtr0309639 mir-4965 pre_miRNA CG8478-S2-modencode_R1_peak_602 chr3L 1368077 1368167 + 14 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -2506 FBgn0003295 FBgn0003295 FBtr0072681 ru protein_coding CG8478-S2-modencode_R1_peak_42 chr2L 4118613 4118867 + 14 NA Intergenic Intergenic -1623 FBgn0020376 FBgn0020376 FBtr0077466 Sr-CIII protein_coding CG8478-S2-modencode_R1_peak_558 chr2R 19546072 19546308 + 14 NA promoter-TSS (FBgn0034886) protein_coding-promoter-TSS (FBgn0034886) 1096 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding CG8478-S2-modencode_R1_peak_681 chr3L 8691241 8691577 + 14 NA Intergenic Intergenic 21916 FBgn0011509 FBgn0011509 FBtr0076598 SrpRbeta protein_coding CG8478-S2-modencode_R1_peak_800 chr3L 19084462 19084963 + 14 NA Intergenic Intergenic -1058 FBgn0036846 FBgn0036846 FBtr0330090 MESR6 protein_coding CG8478-S2-modencode_R1_peak_901 chr3R 5262150 5262408 + 14 NA promoter-TSS (FBgn0261552) protein_coding-promoter-TSS (FBgn0261552) 18615 FBgn0261552 FBgn0261552 FBtr0302691 ps protein_coding CG8478-S2-modencode_R1_peak_880 chr3R 4648461 4648616 + 14 NA TTS (FBgn0040532) protein_coding-TTS (FBgn0040532) 808 FBgn0040532 FBgn0040532 FBtr0305188 CG8369 protein_coding CG8478-S2-modencode_R1_peak_645 chr3L 4543074 4543508 + 14 NA intron (FBgn0035558, intron 2 of 3) protein_coding-intron (FBgn0035558, intron 2 of 3) 1240 FBgn0035558 FBgn0035558 FBtr0113142 CG11357 protein_coding CG8478-S2-modencode_R1_peak_1431 chrX 10213375 10213627 + 14 NA intron (FBgn0259170, intron 2 of 6) protein_coding-intron (FBgn0259170, intron 2 of 6) -6996 FBgn0030189 FBgn0030189 FBtr0071441 CG2909 protein_coding CG8478-S2-modencode_R1_peak_100 chr2L 10277049 10277186 + 13 NA promoter-TSS (FBgn0260749) protein_coding-promoter-TSS (FBgn0260749) 44 FBgn0260749 FBgn0260749 FBtr0333410 Utx protein_coding CG8478-S2-modencode_R1_peak_877 chr3R 4638006 4638170 + 13 NA intron (FBgn0037635, intron 1 of 1) protein_coding-intron (FBgn0037635, intron 1 of 1) -2555 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding CG8478-S2-modencode_R1_peak_283 chr2R 6325597 6325848 + 13 NA promoter-TSS (FBgn0001122) protein_coding-promoter-TSS (FBgn0001122) -829 FBgn0033523 FBgn0033523 FBtr0088314 CG12895 protein_coding CG8478-S2-modencode_R1_peak_559 chr2R 19600892 19601414 + 13 NA promoter-TSS (FBgn0034897) protein_coding-promoter-TSS (FBgn0034897) -272 FBgn0034897 FBgn0034897 FBtr0113114 Sesn protein_coding CG8478-S2-modencode_R1_peak_693 chr3L 10359050 10359145 + 13 NA TTS (FBgn0262439) pre_miRNA-TTS (FBgn0262439) 716 FBgn0262439 FBgn0262439 FBtr0304433 mir-276a pre_miRNA CG8478-S2-modencode_R1_peak_82 chr2L 8163722 8163848 + 13 NA intron (FBgn0031993, intron 1 of 29) protein_coding-intron (FBgn0031993, intron 1 of 29) 487 FBgn0031993 FBgn0031993 FBtr0303400 Piezo protein_coding CG8478-S2-modencode_R1_peak_604 chr3L 1488165 1488253 + 13 NA promoter-TSS (FBgn0086670) snoRNA-promoter-TSS (FBgn0086670) -530 FBgn0263839 FBgn0263839 FBtr0321280 CR43701 ncRNA CG8478-S2-modencode_R1_peak_1391 chrX 8791379 8791531 + 13 NA intron (FBgn0011661, intron 1 of 8) protein_coding-intron (FBgn0011661, intron 1 of 6) 910 FBgn0011661 FBgn0011661 FBtr0071272 Moe protein_coding CG8478-S2-modencode_R1_peak_711 chr3L 11486526 11486764 + 13 NA intron (FBgn0036165, intron 1 of 3) protein_coding-intron (FBgn0036165, intron 1 of 3) 5995 FBgn0036165 FBgn0036165 FBtr0076093 chrb protein_coding CG8478-S2-modencode_R1_peak_939 chr3R 8269249 8269400 + 13 NA promoter-TSS (FBgn0086687) protein_coding-promoter-TSS (FBgn0086687) -439 FBgn0086687 FBgn0086687 FBtr0082630 desat1 protein_coding CG8478-S2-modencode_R1_peak_1017 chr3R 13513204 13513311 + 13 NA promoter-TSS (FBgn0051249) protein_coding-promoter-TSS (FBgn0051249) -474 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding CG8478-S2-modencode_R1_peak_688 chr3L 9686690 9686861 + 13 NA intron (FBgn0036030, intron 2 of 7) protein_coding-intron (FBgn0036030, intron 2 of 6) 3025 FBgn0036030 FBgn0036030 FBtr0333856 CG6767 protein_coding CG8478-S2-modencode_R1_peak_1216 chr4 1268875 1269102 + 13 NA exon (FBgn0053653, exon 22 of 24) protein_coding-exon (FBgn0053653, exon 22 of 24) 34425 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_6 chr2L 248351 248527 + 13 NA intron (FBgn0086902, intron 1 of 16) protein_coding-intron (FBgn0086902, intron 1 of 17) 2384 FBgn0086902 FBgn0086902 FBtr0078145 kis protein_coding CG8478-S2-modencode_R1_peak_744 chr3L 16037514 16037649 + 13 NA intron (FBgn0260635, intron 1 of 2) protein_coding-intron (FBgn0260635, intron 1 of 1) -4754 FBgn0264602 FBgn0264602 FBtr0333615 CR43951 ncRNA CG8478-S2-modencode_R1_peak_3 chr2L 168273 168531 + 13 NA intron (FBgn0016977, intron 3 of 13) protein_coding-intron (FBgn0016977, intron 2 of 10) -9738 FBgn0053635 FBgn0053635 FBtr0091612 CG33635 protein_coding CG8478-S2-modencode_R1_peak_1455 chrX 11291532 11291663 + 13 NA intron (FBgn0001624, intron 4 of 11) protein_coding-intron (FBgn0001624, intron 7 of 8) -12383 FBgn0030296 FBgn0030296 FBtr0309222 CG15196 protein_coding CG8478-S2-modencode_R1_peak_321 chr2R 6978701 6978886 + 13 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -4649 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_1429 chrX 10118824 10118993 + 13 NA intron (FBgn0085437, intron 5 of 12) protein_coding-intron (FBgn0085437, intron 5 of 13) 4765 FBgn0085437 FBgn0085437 FBtr0114584 CG34408 protein_coding CG8478-S2-modencode_R1_peak_794 chr3L 18813081 18813259 + 13 NA intron (FBgn0036814, intron 1 of 5) protein_coding-intron (FBgn0036814, intron 1 of 5) 605 FBgn0036814 FBgn0036814 FBtr0332801 CG14073 protein_coding CG8478-S2-modencode_R1_peak_1549 chrX 19577241 19577412 + 13 NA promoter-TSS (FBgn0031057) protein_coding-promoter-TSS (FBgn0031057) 223 FBgn0043903 FBgn0043903 FBtr0074756 dome protein_coding CG8478-S2-modencode_R1_peak_590 chr3L 639984 640111 + 13 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) -2006 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA CG8478-S2-modencode_R1_peak_1355 chrX 6759448 6759573 + 13 NA Intergenic Intergenic -3031 FBgn0263993 FBgn0263993 FBtr0330263 CG43736 protein_coding CG8478-S2-modencode_R1_peak_593 chr3L 644571 644972 + 13 NA TTS (FBgn0263039) ncRNA-TTS (FBgn0263039) 2512 FBgn0262451 FBgn0262451 FBtr0304469 ban pre_miRNA CG8478-S2-modencode_R1_peak_469 chr2R 14301650 14301930 + 13 NA intron (FBgn0027835, intron 2 of 6) protein_coding-intron (FBgn0027835, intron 2 of 6) 2279 FBgn0027835 FBgn0027835 FBtr0086681 Dp1 protein_coding CG8478-S2-modencode_R1_peak_1397 chrX 9363879 9364173 + 13 NA intron (FBgn0261260, intron 2 of 2) protein_coding-intron (FBgn0261260, intron 2 of 14) 26195 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_1432 chrX 10219433 10219698 + 13 NA promoter-TSS (FBgn0030189) protein_coding-promoter-TSS (FBgn0030189) -932 FBgn0030189 FBgn0030189 FBtr0071441 CG2909 protein_coding CG8478-S2-modencode_R1_peak_356 chr2R 7522742 7522940 + 13 NA intron (FBgn0033638, intron 1 of 7) protein_coding-intron (FBgn0033638, intron 1 of 7) 5577 FBgn0033638 FBgn0033638 FBtr0088089 CG9005 protein_coding CG8478-S2-modencode_R1_peak_314 chr2R 6969402 6969557 + 13 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -3612 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_1196 chr3R 26959874 26960027 + 13 NA promoter-TSS (FBgn0013973) protein_coding-promoter-TSS (FBgn0013973) -164 FBgn0013973 FBgn0013973 FBtr0085753 Gycbeta100B protein_coding CG8478-S2-modencode_R1_peak_642 chr3L 4141108 4141239 + 13 NA promoter-TSS (FBgn0004552) protein_coding-promoter-TSS (FBgn0004552) -294 FBgn0004552 FBgn0004552 FBtr0073213 Akh protein_coding CG8478-S2-modencode_R1_peak_648 chr3L 5175945 5176177 + 13 NA intron (FBgn0052423, intron 3 of 11) protein_coding-intron (FBgn0052423, intron 3 of 10) 1836 FBgn0052423 FBgn0052423 FBtr0301599 shep protein_coding CG8478-S2-modencode_R1_peak_934 chr3R 7605583 7605763 + 13 NA promoter-TSS (FBgn0086910) protein_coding-promoter-TSS (FBgn0086910) -1602 FBgn0086910 FBgn0086910 FBtr0082533 l(3)neo38 protein_coding CG8478-S2-modencode_R1_peak_859 chr3R 2916866 2917109 + 13 NA Intergenic Intergenic 2442 FBgn0263768 FBgn0263768 FBtr0310486 CR43685 ncRNA CG8478-S2-modencode_R1_peak_206 chr2R 1610484 1610854 + 13 NA intron (FBgn0000099, intron 1 of 7) protein_coding-intron (FBgn0000099, intron 1 of 7) -6115 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding CG8478-S2-modencode_R1_peak_565 chr2R 20631605 20631831 + 13 NA exon (FBgn0050421, exon 1 of 7) protein_coding-exon (FBgn0050421, exon 1 of 7) 383 FBgn0050421 FBgn0050421 FBtr0072369 CG30421 protein_coding CG8478-S2-modencode_R1_peak_1501 chrX 14841561 14841729 + 13 NA intron (FBgn0027601, intron 3 of 6) protein_coding-intron (FBgn0027601, intron 1 of 4) 4182 FBgn0027601 FBgn0027601 FBtr0073972 pdgy protein_coding CG8478-S2-modencode_R1_peak_927 chr3R 6217869 6217990 + 13 NA intron (FBgn0259938, intron 1 of 2) protein_coding-intron (FBgn0259938, intron 1 of 3) 3944 FBgn0259938 FBgn0259938 FBtr0305152 cwo protein_coding CG8478-S2-modencode_R1_peak_893 chr3R 5176490 5176878 + 13 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) -3306 FBgn0086053 FBgn0086053 FBtr0114329 snoRNA:Me18S-G1358a snoRNA CG8478-S2-modencode_R1_peak_9 chr2L 493578 493816 + 13 NA intron (FBgn0003963, intron 2 of 8) protein_coding-intron (FBgn0003963, intron 1 of 7) -14009 FBgn0043364 FBgn0043364 FBtr0310030 cbt protein_coding CG8478-S2-modencode_R1_peak_27 chr2L 1884812 1885101 + 13 NA promoter-TSS (FBgn0031373) protein_coding-promoter-TSS (FBgn0031373) 334 FBgn0031374 FBgn0031374 FBtr0110882 CG7337 protein_coding CG8478-S2-modencode_R1_peak_615 chr3L 2820858 2821173 + 13 NA promoter-TSS (FBgn0263392) protein_coding-promoter-TSS (FBgn0263392) 38760 FBgn0035375 FBgn0035375 FBtr0333442 pgant6 protein_coding CG8478-S2-modencode_R1_peak_751 chr3L 16923690 16923828 + 13 NA TTS (FBgn0036678) protein_coding-TTS (FBgn0036678) -3225 FBgn0036677 FBgn0036677 FBtr0075307 CG13023 protein_coding CG8478-S2-modencode_R1_peak_1127 chr3R 21845780 21846000 + 13 NA promoter-TSS (FBgn0263652) ncRNA-promoter-TSS (FBgn0263652) -859 FBgn0263652 FBgn0263652 FBtr0310085 CR43643 ncRNA CG8478-S2-modencode_R1_peak_943 chr3R 8545349 8545570 + 13 NA promoter-TSS (FBgn0002719) protein_coding-promoter-TSS (FBgn0002719) 55 FBgn0002719 FBgn0002719 FBtr0330025 Men protein_coding CG8478-S2-modencode_R1_peak_1079 chr3R 19151706 19151915 + 13 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 20074 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_393 chr2R 9879159 9879593 + 13 NA intron (FBgn0002643, intron 1 of 6) protein_coding-intron (FBgn0002643, intron 1 of 6) -1161 FBgn0020620 FBgn0020620 FBtr0087604 RN-tre protein_coding CG8478-S2-modencode_R1_peak_598 chr3L 1034166 1034682 + 13 NA promoter-TSS (FBgn0035181) protein_coding-promoter-TSS (FBgn0035181) -761 FBgn0035181 FBgn0035181 FBtr0072622 CG9205 protein_coding CG8478-S2-modencode_R1_peak_832 chr3R 637086 637223 + 13 NA intron (FBgn0026417, intron 1 of 1) protein_coding-intron (FBgn0026417, intron 1 of 1) 629 FBgn0026417 FBgn0026417 FBtr0078876 Hus1-like protein_coding CG8478-S2-modencode_R1_peak_1116 chr3R 20920460 20920667 + 13 NA promoter-TSS (FBgn0004898) protein_coding-promoter-TSS (FBgn0004898) -268 FBgn0004898 FBgn0004898 FBtr0084771 fd96Cb protein_coding CG8478-S2-modencode_R1_peak_201 chr2R 1147173 1147268 + 13 NA promoter-TSS (FBgn0033015) protein_coding-promoter-TSS (FBgn0033015) -264 FBgn0033015 FBgn0033015 FBtr0086083 d4 protein_coding CG8478-S2-modencode_R1_peak_1119 chr3R 21319945 21320126 + 13 NA exon (FBgn0053494, exon 2 of 3) protein_coding-exon (FBgn0053494, exon 2 of 3) 848 FBgn0053494 FBgn0053494 FBtr0089607 CG33494 protein_coding CG8478-S2-modencode_R1_peak_1418 chrX 9561662 9561808 + 13 NA exon (FBgn0261617, exon 14 of 14) protein_coding-exon (FBgn0261617, exon 14 of 14) -4944 FBgn0030148 FBgn0030148 FBtr0071403 CG3106 protein_coding CG8478-S2-modencode_R1_peak_566 chr2R 20655406 20655625 + 13 NA TTS (FBgn0035060) protein_coding-TTS (FBgn0035060) 182 FBgn0027590 FBgn0027590 FBtr0305310 CG16936 protein_coding CG8478-S2-modencode_R1_peak_900 chr3R 5254439 5254586 + 13 NA intron (FBgn0261552, intron 1 of 5) protein_coding-intron (FBgn0261552, intron 2 of 7) 10848 FBgn0261552 FBgn0261552 FBtr0302691 ps protein_coding CG8478-S2-modencode_R1_peak_1381 chrX 8293208 8293363 + 13 NA promoter-TSS (FBgn0040928) protein_coding-promoter-TSS (FBgn0040928) 312 FBgn0030034 FBgn0030034 FBtr0071174 CG10555 protein_coding CG8478-S2-modencode_R1_peak_1312 chrX 3668276 3668474 + 13 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 3 of 9) 1702 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_255 chr2R 4214658 4214918 + 13 NA promoter-TSS (FBgn0261588) protein_coding-promoter-TSS (FBgn0261588) -217 FBgn0261588 FBgn0261588 FBtr0302918 pdm3 protein_coding CG8478-S2-modencode_R1_peak_1031 chr3R 14306446 14306606 + 13 NA promoter-TSS (FBgn0004652) protein_coding-promoter-TSS (FBgn0004652) 64782 FBgn0004652 FBgn0004652 FBtr0083647 fru protein_coding CG8478-S2-modencode_R1_peak_999 chr3R 12276264 12276398 + 13 NA intron (FBgn0044826, intron 1 of 1) protein_coding-intron (FBgn0044826, intron 1 of 1) 3219 FBgn0044826 FBgn0044826 FBtr0083312 Pak3 protein_coding CG8478-S2-modencode_R1_peak_1512 chrX 15780976 15781181 + 13 NA TTS (FBgn0030703) protein_coding-TTS (FBgn0030703) 241 FBgn0260938 FBgn0260938 FBtr0310066 tay protein_coding CG8478-S2-modencode_R1_peak_1274 chrX 2528149 2528572 + 13 NA TTS (FBgn0261922) protein_coding-TTS (FBgn0261922) -8690 FBgn0003371 FBgn0003371 FBtr0112828 sgg protein_coding CG8478-S2-modencode_R1_peak_1369 chrX 7598125 7598435 + 13 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) -3528 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_866 chr3R 3945558 3946095 + 13 NA intron (FBgn0243512, intron 3 of 3) protein_coding-intron (FBgn0243512, intron 3 of 3) -2595 FBgn0037549 FBgn0037549 FBtr0113205 CG7878 protein_coding CG8478-S2-modencode_R1_peak_1210 chr4 828574 828662 + 13 NA promoter-TSS (FBgn0039938) protein_coding-promoter-TSS (FBgn0039938) 8559 FBgn0039939 FBgn0039939 FBtr0089242 CG11231 protein_coding CG8478-S2-modencode_R1_peak_1495 chrX 13885112 13885267 + 13 NA Intergenic Intergenic -5302 FBgn0263115 FBgn0263115 FBtr0112554 mamo protein_coding CG8478-S2-modencode_R1_peak_50 chr2L 5007803 5008089 + 13 NA intron (FBgn0053113, intron 1 of 5) protein_coding-intron (FBgn0053113, intron 1 of 4) 2888 FBgn0259719 FBgn0259719 FBtr0301130 Tfb5 protein_coding CG8478-S2-modencode_R1_peak_563 chr2R 19882412 19882634 + 13 NA promoter-TSS (FBgn0034951) protein_coding-promoter-TSS (FBgn0034951) 50 FBgn0034951 FBgn0034951 FBtr0072201 CG3860 protein_coding CG8478-S2-modencode_R1_peak_59 chr2L 6082912 6083169 + 13 NA exon (FBgn0028420, exon 1 of 4) protein_coding-exon (FBgn0028420, exon 1 of 4) 4587 FBgn0031778 FBgn0031778 FBtr0308942 CR9162 ncRNA CG8478-S2-modencode_R1_peak_1348 chrX 6437989 6438209 + 13 NA intron (FBgn0085446, intron 2 of 9) protein_coding-intron (FBgn0085446, intron 2 of 3) 10056 FBgn0000524 FBgn0000524 FBtr0070914 dx protein_coding CG8478-S2-modencode_R1_peak_1148 chr3R 22937535 22937741 + 13 NA promoter-TSS (FBgn0027574) protein_coding-promoter-TSS (FBgn0027574) 339 FBgn0039487 FBgn0039487 FBtr0085132 gb protein_coding CG8478-S2-modencode_R1_peak_1363 chrX 7584842 7584953 + 13 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) 4054 FBgn0029504 FBgn0029504 FBtr0071079 CHES-1-like protein_coding CG8478-S2-modencode_R1_peak_686 chr3L 9502378 9502582 + 13 NA TTS (FBgn0010408) protein_coding-TTS (FBgn0010408) 203 FBgn0036008 FBgn0036008 FBtr0333863 CG3408 protein_coding CG8478-S2-modencode_R1_peak_1194 chr3R 26888165 26888290 + 13 NA Intergenic Intergenic -1624 FBgn0002413 FBgn0002413 FBtr0085744 dco protein_coding CG8478-S2-modencode_R1_peak_987 chr3R 12032182 12032436 + 13 NA Intergenic Intergenic -1336 FBgn0010438 FBgn0010438 FBtr0083277 mtSSB protein_coding CG8478-S2-modencode_R1_peak_1007 chr3R 12760319 12760593 + 13 NA promoter-TSS (FBgn0000015) protein_coding-promoter-TSS (FBgn0000015) -3121 FBgn0000015 FBgn0000015 FBtr0330709 Abd-B protein_coding CG8478-S2-modencode_R1_peak_1091 chr3R 19211934 19212040 + 13 NA Intergenic Intergenic -1488 FBgn0039075 FBgn0039075 FBtr0301085 CG4393 protein_coding CG8478-S2-modencode_R1_peak_1459 chrX 11589054 11589311 + 13 NA promoter-TSS (FBgn0011754) protein_coding-promoter-TSS (FBgn0011754) 37 FBgn0011754 FBgn0011754 FBtr0301500 PhKgamma protein_coding CG8478-S2-modencode_R1_peak_338 chr2R 7090986 7091180 + 13 NA intron (FBgn0003396, intron 1 of 6) protein_coding-intron (FBgn0003396, intron 2 of 7) 15686 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding CG8478-S2-modencode_R1_peak_1415 chrX 9540092 9540181 + 13 NA promoter-TSS (FBgn0028341) protein_coding-promoter-TSS (FBgn0028341) -5479 FBgn0028341 FBgn0028341 FBtr0303559 l(1)G0232 protein_coding CG8478-S2-modencode_R1_peak_197 chr2R 148430 148552 + 13 NA Intergenic Intergenic -18047 FBgn0262117 FBgn0262117 FBtr0111269 IntS3 protein_coding CG8478-S2-modencode_R1_peak_1070 chr3R 18983068 18983204 + 13 NA TTS (FBgn0039058) protein_coding-TTS (FBgn0039058) 456 FBgn0004395 FBgn0004395 FBtr0084403 unk protein_coding CG8478-S2-modencode_R1_peak_1327 chrX 4318295 4318473 + 13 NA intron (FBgn0000179, intron 1 of 7) protein_coding-intron (FBgn0000179, intron 1 of 7) 11495 FBgn0000179 FBgn0000179 FBtr0300609 bi protein_coding CG8478-S2-modencode_R1_peak_309 chr2R 6955567 6955724 + 13 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -17446 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_351 chr2R 7503089 7503253 + 13 NA promoter-TSS (FBgn0264508) ncRNA-promoter-TSS (FBgn0264508) -529 FBgn0264508 FBgn0264508 FBtr0333069 CR43907 ncRNA CG8478-S2-modencode_R1_peak_392 chr2R 9866050 9866228 + 13 NA intron (FBgn0033889, intron 3 of 9) protein_coding-intron (FBgn0033889, intron 2 of 8) 1531 FBgn0033889 FBgn0033889 FBtr0303989 CG6701 protein_coding CG8478-S2-modencode_R1_peak_1368 chrX 7597527 7597883 + 13 NA intron (FBgn0029504, intron 1 of 5) protein_coding-intron (FBgn0029504, intron 1 of 5) -4103 FBgn0262979 FBgn0262979 FBtr0306815 CG43287 protein_coding CG8478-S2-modencode_R1_peak_1182 chr3R 26275670 26275779 + 13 NA intron (FBgn0028646, intron 1 of 10) protein_coding-intron (FBgn0028646, intron 1 of 9) 404 FBgn0028646 FBgn0028646 FBtr0085695 aralar1 protein_coding CG8478-S2-modencode_R1_peak_531 chr2R 17394656 17394856 + 13 NA intron (FBgn0043070, intron 1 of 7) protein_coding-intron (FBgn0043070, intron 1 of 6) 5154 FBgn0043070 FBgn0043070 FBtr0089706 MESK2 protein_coding CG8478-S2-modencode_R1_peak_163 chr2L 18881447 18881682 + 13 NA promoter-TSS (FBgn0003896) protein_coding-promoter-TSS (FBgn0003896) -308 FBgn0003896 FBgn0003896 FBtr0081111 tup protein_coding CG8478-S2-modencode_R1_peak_1400 chrX 9386895 9387348 + 13 NA intron (FBgn0261260, intron 1 of 2) protein_coding-intron (FBgn0261260, intron 1 of 14) 3100 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_1021 chr3R 13528137 13528465 + 13 NA intron (FBgn0261885, intron 4 of 15) protein_coding-intron (FBgn0261885, intron 4 of 15) -15518 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding CG8478-S2-modencode_R1_peak_246 chr2R 3667543 3667633 + 13 NA intron (FBgn0050497, intron 1 of 2) protein_coding-intron (FBgn0050497, intron 1 of 2) 5123 FBgn0000337 FBgn0000337 FBtr0088931 cn protein_coding CG8478-S2-modencode_R1_peak_1504 chrX 14974926 14975259 + 13 NA promoter-TSS (FBgn0053177) protein_coding-promoter-TSS (FBgn0053177) -490 FBgn0053177 FBgn0053177 FBtr0073962 CG33177 protein_coding CG8478-S2-modencode_R1_peak_140 chr2L 15912935 15913095 + 13 NA intron (FBgn0028645, intron 2 of 6) protein_coding-intron (FBgn0028645, intron 2 of 6) -3873 FBgn0032577 FBgn0032577 FBtr0080792 CG13244 protein_coding CG8478-S2-modencode_R1_peak_71 chr2L 7960877 7961013 + 13 NA intron (FBgn0085450, intron 1 of 1) protein_coding-intron (FBgn0085450, intron 1 of 1) 16120 FBgn0085450 FBgn0085450 FBtr0112720 Snoo protein_coding CG8478-S2-modencode_R1_peak_208 chr2R 1615955 1616187 + 13 NA Intergenic Intergenic -11517 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding CG8478-S2-modencode_R1_peak_53 chr2L 5294633 5295290 + 13 NA Intergenic Intergenic -10761 FBgn0016076 FBgn0016076 FBtr0300020 vri protein_coding CG8478-S2-modencode_R1_peak_1479 chrX 12632431 12632615 + 13 NA intron (FBgn0263865, intron 2 of 10) protein_coding-intron (FBgn0263865, intron 1 of 9) 3954 FBgn0263865 FBgn0263865 FBtr0333766 Smr protein_coding CG8478-S2-modencode_R1_peak_258 chr2R 4558156 4558395 + 13 NA promoter-TSS (FBgn0263120) protein_coding-promoter-TSS (FBgn0263120) -4800 FBgn0263120 FBgn0263120 FBtr0100431 Acsl protein_coding CG8478-S2-modencode_R1_peak_147 chr2L 16351908 16352061 + 13 NA promoter-TSS (FBgn0028506) protein_coding-promoter-TSS (FBgn0028506) 616 FBgn0087041 FBgn0087041 FBtr0273183 CG42231 protein_coding CG8478-S2-modencode_R1_peak_1240 chrUextra 6346454 6346687 + 13 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1291 chrX 3326977 3327102 + 13 NA intron (FBgn0029657, intron 1 of 3) protein_coding-intron (FBgn0029657, intron 1 of 3) 2801 FBgn0029658 FBgn0029658 FBtr0070532 CG14269 protein_coding CG8478-S2-modencode_R1_peak_325 chr2R 6982110 6982286 + 13 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -8054 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_1572 chrX 21245088 21245183 + 13 NA promoter-TSS (FBgn0003423) protein_coding-promoter-TSS (FBgn0003423) -1315 FBgn0003423 FBgn0003423 FBtr0077207 slgA protein_coding CG8478-S2-modencode_R1_peak_1124 chr3R 21706528 21706730 + 13 NA intron (FBgn0027865, intron 1 of 4) protein_coding-intron (FBgn0027865, intron 1 of 4) 533 FBgn0027865 FBgn0027865 FBtr0330163 Tsp96F protein_coding CG8478-S2-modencode_R1_peak_436 chr2R 12904644 12904780 + 13 NA exon (FBgn0034181, exon 4 of 4) protein_coding-exon (FBgn0034181, exon 4 of 4) -1321 FBgn0034180 FBgn0034180 FBtr0114629 Ehbp1 protein_coding CG8478-S2-modencode_R1_peak_1056 chr3R 17324970 17325230 + 13 NA promoter-TSS (FBgn0004863) protein_coding-promoter-TSS (FBgn0004863) -877 FBgn0004863 FBgn0004863 FBtr0084111 C15 protein_coding CG8478-S2-modencode_R1_peak_1195 chr3R 26953161 26953400 + 13 NA TTS (FBgn0039820) protein_coding-TTS (FBgn0039820) 1407 FBgn0039820 FBgn0039820 FBtr0085736 CG15554 protein_coding CG8478-S2-modencode_R1_peak_43 chr2L 4332473 4332639 + 13 NA TTS (FBgn0028482) protein_coding-TTS (FBgn0028482) -1370 FBgn0020762 FBgn0020762 FBtr0112898 Atet protein_coding CG8478-S2-modencode_R1_peak_786 chr3L 18764675 18764982 + 13 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -5984 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding CG8478-S2-modencode_R1_peak_24 chr2L 1667375 1667910 + 13 NA promoter-TSS (FBgn0086758) protein_coding-promoter-TSS (FBgn0086758) 16384 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_1574 chrX 21465625 21465753 + 13 NA Intergenic Intergenic 10027 FBgn0027588 FBgn0027588 FBtr0070062 CG14476 protein_coding CG8478-S2-modencode_R1_peak_215 chr2R 2019526 2019662 + 13 NA promoter-TSS (FBgn0000546) protein_coding-promoter-TSS (FBgn0000546) -248 FBgn0000546 FBgn0000546 FBtr0086011 EcR protein_coding CG8478-S2-modencode_R1_peak_322 chr2R 6979669 6979804 + 13 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -5592 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_768 chr3L 17915907 17916270 + 13 NA Intergenic Intergenic -10423 FBgn0036772 FBgn0036772 FBtr0075152 CG5290 protein_coding CG8478-S2-modencode_R1_peak_651 chr3L 5746277 5746500 + 13 NA promoter-TSS (FBgn0016756) protein_coding-promoter-TSS (FBgn0016756) 315 FBgn0016756 FBgn0016756 FBtr0077096 Ubp64E protein_coding CG8478-S2-modencode_R1_peak_586 chr3L 633966 634150 + 13 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 3983 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA CG8478-S2-modencode_R1_peak_940 chr3R 8527947 8528115 + 13 NA intron (FBgn0016693, intron 1 of 2) protein_coding-intron (FBgn0016693, intron 2 of 3) -2785 FBgn0038080 FBgn0038080 FBtr0082656 CG12279 protein_coding CG8478-S2-modencode_R1_peak_474 chr2R 14423827 14423999 + 13 NA promoter-TSS (FBgn0003067) protein_coding-promoter-TSS (FBgn0003067) -359 FBgn0003067 FBgn0003067 FBtr0086701 Pepck protein_coding CG8478-S2-modencode_R1_peak_1506 chrX 15644675 15644812 + 13 NA TTS (FBgn0030685) protein_coding-TTS (FBgn0030685) 1533 FBgn0030683 FBgn0030683 FBtr0074087 CG8239 protein_coding CG8478-S2-modencode_R1_peak_578 chr3L 547383 547524 + 13 NA intron (FBgn0035142, intron 1 of 10) protein_coding-intron (FBgn0035142, intron 1 of 10) -4522 FBgn0035141 FBgn0035141 FBtr0072564 Cypl protein_coding CG8478-S2-modencode_R1_peak_1464 chrX 12515601 12516029 + 13 NA TTS (FBgn0030408) protein_coding-TTS (FBgn0030408) -2510 FBgn0030409 FBgn0030409 FBtr0073674 CG15728 protein_coding CG8478-S2-modencode_R1_peak_614 chr3L 2636156 2636306 + 13 NA promoter-TSS (FBgn0035357) protein_coding-promoter-TSS (FBgn0035357) 4516 FBgn0250911 FBgn0250911 FBtr0290341 CG42245 protein_coding CG8478-S2-modencode_R1_peak_1556 chrX 20051267 20051361 + 13 NA exon (FBgn0031090, exon 3 of 3) protein_coding-exon (FBgn0031090, exon 3 of 3) 2591 FBgn0031090 FBgn0031090 FBtr0333548 Rab35 protein_coding CG8478-S2-modencode_R1_peak_1246 chrUextra 17373772 17373916 + 13 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1170 chr3R 25612189 25612349 + 13 NA intron (FBgn0001297, intron 1 of 2) protein_coding-intron (FBgn0001297, intron 1 of 2) -2389 FBgn0001297 FBgn0001297 FBtr0290076 kay protein_coding CG8478-S2-modencode_R1_peak_1543 chrX 19158402 19158541 + 13 NA intron (FBgn0040068, intron 3 of 9) protein_coding-intron (FBgn0040068, intron 3 of 9) 2618 FBgn0040068 FBgn0040068 FBtr0333759 vav protein_coding CG8478-S2-modencode_R1_peak_519 chr2R 16961343 16961548 + 13 NA promoter-TSS (FBgn0003748) protein_coding-promoter-TSS (FBgn0003748) -1155 FBgn0034583 FBgn0034583 FBtr0071541 CG10527 protein_coding CG8478-S2-modencode_R1_peak_1177 chr3R 26140478 26140598 + 13 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) -8179 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_795 chr3L 18883556 18883760 + 13 NA promoter-TSS (FBgn0036821) protein_coding-promoter-TSS (FBgn0036821) -1825 FBgn0036822 FBgn0036822 FBtr0075065 CG11637 protein_coding CG8478-S2-modencode_R1_peak_1376 chrX 7838925 7839149 + 13 NA promoter-TSS (FBgn0027280) protein_coding-promoter-TSS (FBgn0027280) -319 FBgn0027280 FBgn0027280 FBtr0071130 l(1)G0193 protein_coding CG8478-S2-modencode_R1_peak_1380 chrX 8035878 8036233 + 13 NA TTS (FBgn0030006) protein_coding-TTS (FBgn0030006) 246 FBgn0025800 FBgn0025800 FBtr0071192 Smox protein_coding CG8478-S2-modencode_R1_peak_475 chr2R 14469805 14469894 + 13 NA intron (FBgn0050115, intron 1 of 8) protein_coding-intron (FBgn0050115, intron 1 of 7) 29411 FBgn0050115 FBgn0050115 FBtr0310055 GEFmeso protein_coding CG8478-S2-modencode_R1_peak_1261 chrX 1955228 1955382 + 12 NA intron (FBgn0025625, intron 1 of 8) protein_coding-intron (FBgn0025625, intron 1 of 8) 643 FBgn0025625 FBgn0025625 FBtr0070340 Sik2 protein_coding CG8478-S2-modencode_R1_peak_611 chr3L 2578734 2578971 + 12 NA intron (FBgn0010909, intron 3 of 17) protein_coding-intron (FBgn0010909, intron 3 of 18) 7688 FBgn0010909 FBgn0010909 FBtr0333362 msn protein_coding CG8478-S2-modencode_R1_peak_342 chr2R 7255326 7255538 + 12 NA promoter-TSS (FBgn0033627) protein_coding-promoter-TSS (FBgn0033627) -352 FBgn0033627 FBgn0033627 FBtr0088129 CG13204 protein_coding CG8478-S2-modencode_R1_peak_1293 chrX 3345353 3345441 + 12 NA Intergenic Intergenic 8876 FBgn0029659 FBgn0029659 FBtr0331608 CG16782 protein_coding CG8478-S2-modencode_R1_peak_153 chr2L 16535751 16535923 + 12 NA Intergenic Intergenic -6709 FBgn0051816 FBgn0051816 FBtr0080868 CG31816 protein_coding CG8478-S2-modencode_R1_peak_911 chr3R 5902521 5902688 + 12 NA Intergenic Intergenic -1509 FBgn0037786 FBgn0037786 FBtr0309853 CG5361 protein_coding CG8478-S2-modencode_R1_peak_595 chr3L 647756 647976 + 12 NA promoter-TSS (FBgn0035147) protein_coding-promoter-TSS (FBgn0035147) -908 FBgn0035147 FBgn0035147 FBtr0306917 Gale protein_coding CG8478-S2-modencode_R1_peak_224 chr2R 2511241 2511690 + 12 NA exon (FBgn0053919, exon 4 of 4) protein_coding-exon (FBgn0053919, exon 4 of 4) 617 FBgn0053919 FBgn0053919 FBtr0091923 CG33919 protein_coding CG8478-S2-modencode_R1_peak_473 chr2R 14419016 14419173 + 12 NA promoter-TSS (FBgn0034356) protein_coding-promoter-TSS (FBgn0034356) -819 FBgn0034356 FBgn0034356 FBtr0113093 CG10924 protein_coding CG8478-S2-modencode_R1_peak_603 chr3L 1368412 1368506 + 12 NA intron (FBgn0003138, intron 3 of 7) protein_coding-intron (FBgn0003138, intron 1 of 6) -2169 FBgn0003295 FBgn0003295 FBtr0072681 ru protein_coding CG8478-S2-modencode_R1_peak_1405 chrX 9395683 9395942 + 12 NA Intergenic Intergenic 4721 FBgn0263508 FBgn0263508 FBtr0309529 CR43497 ncRNA CG8478-S2-modencode_R1_peak_15 chr2L 847016 847194 + 12 NA intron (FBgn0020304, intron 1 of 4) protein_coding-intron (FBgn0020304, intron 2 of 4) 3966 FBgn0020304 FBgn0020304 FBtr0290075 drongo protein_coding CG8478-S2-modencode_R1_peak_1527 chrX 16577445 16577736 + 12 NA TTS (FBgn0259923) protein_coding-TTS (FBgn0259923) 338 FBgn0000152 FBgn0000152 FBtr0100417 Axs protein_coding CG8478-S2-modencode_R1_peak_84 chr2L 8421910 8422132 + 12 NA intron (FBgn0027932, intron 1 of 4) protein_coding-intron (FBgn0027932, intron 1 of 5) 6331 FBgn0027932 FBgn0027932 FBtr0079666 Akap200 protein_coding CG8478-S2-modencode_R1_peak_1539 chrX 19051959 19052063 + 12 NA intron (FBgn0261461, intron 1 of 7) protein_coding-intron (FBgn0261461, intron 1 of 4) -11234 FBgn0261461 FBgn0261461 FBtr0299625 RhoGAP18B protein_coding CG8478-S2-modencode_R1_peak_891 chr3R 5168926 5169069 + 12 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) 1402 FBgn0263749 FBgn0263749 FBtr0310401 CG43674 protein_coding CG8478-S2-modencode_R1_peak_1460 chrX 11711112 11711345 + 12 NA promoter-TSS (FBgn0030336) protein_coding-promoter-TSS (FBgn0030336) -663 FBgn0030336 FBgn0030336 FBtr0073607 CG1578 protein_coding CG8478-S2-modencode_R1_peak_99 chr2L 10226057 10226238 + 12 NA intron (FBgn0032196, intron 1 of 5) protein_coding-intron (FBgn0032196, intron 1 of 5) 661 FBgn0032196 FBgn0032196 FBtr0079956 CG5708 protein_coding CG8478-S2-modencode_R1_peak_1134 chr3R 21932252 21932368 + 12 NA promoter-TSS (FBgn0051324) protein_coding-promoter-TSS (FBgn0051324) -7877 FBgn0039411 FBgn0039411 FBtr0113293 dys protein_coding CG8478-S2-modencode_R1_peak_884 chr3R 4983711 4983834 + 12 NA promoter-TSS (FBgn0003165) protein_coding-promoter-TSS (FBgn0003165) -100 FBgn0003165 FBgn0003165 FBtr0305197 pum protein_coding CG8478-S2-modencode_R1_peak_816 chr3L 22816367 22816763 + 12 NA intron (FBgn0027339, intron 1 of 5) protein_coding-intron (FBgn0027339, intron 2 of 6) 9923 FBgn0027339 FBgn0027339 FBtr0100184 jim protein_coding CG8478-S2-modencode_R1_peak_225 chr2R 2515488 2515655 + 12 NA intron (FBgn0262736, intron 2 of 3) protein_coding-intron (FBgn0262736, intron 2 of 3) -3489 FBgn0053919 FBgn0053919 FBtr0091923 CG33919 protein_coding CG8478-S2-modencode_R1_peak_248 chr2R 3875555 3875732 + 12 NA promoter-TSS (FBgn0033247) protein_coding-promoter-TSS (FBgn0033247) -529 FBgn0033247 FBgn0033247 FBtr0088862 Nup44A protein_coding CG8478-S2-modencode_R1_peak_874 chr3R 4631058 4631324 + 12 NA promoter-TSS (FBgn0037634) protein_coding-promoter-TSS (FBgn0037634) 161 FBgn0037633 FBgn0037633 FBtr0081934 CG9839 protein_coding CG8478-S2-modencode_R1_peak_176 chr2L 20804445 20804611 + 12 NA intron (FBgn0032886, intron 1 of 2) protein_coding-intron (FBgn0032886, intron 1 of 2) -5530 FBgn0032886 FBgn0032886 FBtr0081416 CG9328 protein_coding CG8478-S2-modencode_R1_peak_1037 chr3R 15715659 15715807 + 12 NA promoter-TSS (FBgn0038744) protein_coding-promoter-TSS (FBgn0038744) -837 FBgn0038744 FBgn0038744 FBtr0301117 CG4733 protein_coding CG8478-S2-modencode_R1_peak_649 chr3L 5179974 5180299 + 12 NA intron (FBgn0052423, intron 3 of 11) protein_coding-intron (FBgn0052423, intron 3 of 10) -2239 FBgn0052423 FBgn0052423 FBtr0301599 shep protein_coding CG8478-S2-modencode_R1_peak_799 chr3L 19081365 19081709 + 12 NA Intergenic Intergenic -2011 FBgn0036844 FBgn0036844 FBtr0075035 Mkp3 protein_coding CG8478-S2-modencode_R1_peak_1571 chrX 21241501 21241650 + 12 NA exon (FBgn0024182, exon 3 of 5) protein_coding-exon (FBgn0024182, exon 3 of 5) 1934 FBgn0024251 FBgn0024251 FBtr0331744 bbx protein_coding CG8478-S2-modencode_R1_peak_341 chr2R 7254521 7254802 + 12 NA intron (FBgn0033627, intron 1 of 2) protein_coding-intron (FBgn0033627, intron 1 of 2) -1123 FBgn0033627 FBgn0033627 FBtr0088129 CG13204 protein_coding CG8478-S2-modencode_R1_peak_1107 chr3R 20098736 20098911 + 12 NA promoter-TSS (FBgn0086365) protein_coding-promoter-TSS (FBgn0086365) 70 FBgn0086365 FBgn0086365 FBtr0084598 Orct2 protein_coding CG8478-S2-modencode_R1_peak_736 chr3L 15507601 15507809 + 12 NA Intergenic Intergenic 2451 FBgn0036503 FBgn0036503 FBtr0075603 CG13454 protein_coding CG8478-S2-modencode_R1_peak_1350 chrX 6563956 6564092 + 12 NA Intergenic Intergenic 3978 FBgn0029887 FBgn0029887 FBtr0070991 CG3198 protein_coding CG8478-S2-modencode_R1_peak_806 chr3L 19933594 19934032 + 12 NA intron (FBgn0004852, intron 1 of 20) protein_coding-intron (FBgn0004852, intron 1 of 19) 1426 FBgn0004852 FBgn0004852 FBtr0304746 Ac76E protein_coding CG8478-S2-modencode_R1_peak_798 chr3L 19080083 19080356 + 12 NA promoter-TSS (FBgn0036844) protein_coding-promoter-TSS (FBgn0036844) -693 FBgn0036844 FBgn0036844 FBtr0075035 Mkp3 protein_coding CG8478-S2-modencode_R1_peak_1407 chrX 9397262 9397671 + 12 NA exon (FBgn0263508, exon 2 of 2) ncRNA-exon (FBgn0263508, exon 2 of 2) 3067 FBgn0263508 FBgn0263508 FBtr0309529 CR43497 ncRNA CG8478-S2-modencode_R1_peak_1402 chrX 9389480 9389815 + 12 NA intron (FBgn0261260, intron 1 of 2) protein_coding-intron (FBgn0261260, intron 1 of 14) 574 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_989 chr3R 12048136 12048292 + 12 NA Intergenic Intergenic -17241 FBgn0010438 FBgn0010438 FBtr0083277 mtSSB protein_coding CG8478-S2-modencode_R1_peak_1273 chrX 2228993 2229484 + 12 NA promoter-TSS (FBgn0044047) protein_coding-promoter-TSS (FBgn0044047) -2797 FBgn0044047 FBgn0044047 FBtr0333731 Ilp6 protein_coding CG8478-S2-modencode_R1_peak_1563 chrX 20930041 20930292 + 12 NA intron (FBgn0031150, intron 1 of 6) protein_coding-intron (FBgn0031150, intron 1 of 6) 4593 FBgn0031150 FBgn0031150 FBtr0077247 bves protein_coding CG8478-S2-modencode_R1_peak_729 chr3L 14266160 14266286 + 12 NA Intergenic Intergenic -1220 FBgn0001085 FBgn0001085 FBtr0075742 fz protein_coding CG8478-S2-modencode_R1_peak_1349 chrX 6495645 6495786 + 12 NA promoter-TSS (FBgn0029881) protein_coding-promoter-TSS (FBgn0029881) -643 FBgn0029881 FBgn0029881 FBtr0308653 pigs protein_coding CG8478-S2-modencode_R1_peak_440 chr2R 13154678 13154812 + 12 NA intron (FBgn0261642, intron 1 of 7) protein_coding-intron (FBgn0261642, intron 1 of 3) 4901 FBgn0261642 FBgn0261642 FBtr0086993 mbl protein_coding CG8478-S2-modencode_R1_peak_391 chr2R 9850140 9850356 + 12 NA intron (FBgn0013770, intron 2 of 3) protein_coding-intron (FBgn0013770, intron 2 of 3) -1925 FBgn0261975 FBgn0261975 FBtr0304022 CG42806 protein_coding CG8478-S2-modencode_R1_peak_280 chr2R 6305578 6305797 + 12 NA promoter-TSS (FBgn0033518) protein_coding-promoter-TSS (FBgn0033518) -536 FBgn0033518 FBgn0033518 FBtr0088259 Prx2540-2 protein_coding CG8478-S2-modencode_R1_peak_257 chr2R 4540744 4540832 + 12 NA intron (FBgn0003892, intron 1 of 5) protein_coding-intron (FBgn0003892, intron 1 of 5) 3648 FBgn0003892 FBgn0003892 FBtr0089427 ptc protein_coding CG8478-S2-modencode_R1_peak_960 chr3R 10480722 10480894 + 12 NA intron (FBgn0086686, intron 1 of 5) protein_coding-intron (FBgn0086686, intron 1 of 5) 104 FBgn0086686 FBgn0086686 FBtr0304678 l(3)L1231 protein_coding CG8478-S2-modencode_R1_peak_381 chr2R 9059172 9059433 + 12 NA intron (FBgn0053138, intron 1 of 3) protein_coding-intron (FBgn0053138, intron 1 of 3) 394 FBgn0053138 FBgn0053138 FBtr0310496 CG33138 protein_coding CG8478-S2-modencode_R1_peak_991 chr3R 12070506 12070749 + 12 NA intron (FBgn0040071, intron 1 of 1) protein_coding-intron (FBgn0040071, intron 1 of 1) 2086 FBgn0040071 FBgn0040071 FBtr0083258 tara protein_coding CG8478-S2-modencode_R1_peak_1140 chr3R 22084549 22084678 + 12 NA promoter-TSS (FBgn0000064) protein_coding-promoter-TSS (FBgn0000064) 2700 FBgn0000064 FBgn0000064 FBtr0085000 Ald protein_coding CG8478-S2-modencode_R1_peak_846 chr3R 2242318 2242436 + 12 NA intron (FBgn0264495, intron 2 of 9) protein_coding-intron (FBgn0264495, intron 2 of 8) 9798 FBgn0264495 FBgn0264495 FBtr0303788 gpp protein_coding CG8478-S2-modencode_R1_peak_1164 chr3R 25583221 25583369 + 12 NA Intergenic Intergenic 8354 FBgn0260990 FBgn0260990 FBtr0085477 yata protein_coding CG8478-S2-modencode_R1_peak_961 chr3R 10515149 10515372 + 12 NA intron (FBgn0051314, intron 1 of 6) protein_coding-intron (FBgn0051314, intron 1 of 7) 7797 FBgn0051314 FBgn0051314 FBtr0301499 Neu3 protein_coding CG8478-S2-modencode_R1_peak_630 chr3L 3415723 3415827 + 12 NA intron (FBgn0014388, intron 1 of 1) protein_coding-intron (FBgn0014388, intron 1 of 1) 2152 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding CG8478-S2-modencode_R1_peak_289 chr2R 6418427 6418665 + 12 NA TTS (FBgn0005630) protein_coding-TTS (FBgn0005630) 4037 FBgn0005630 FBgn0005630 FBtr0089362 lola protein_coding CG8478-S2-modencode_R1_peak_461 chr2R 14228951 14229130 + 12 NA intron (FBgn0010575, intron 1 of 10) protein_coding-intron (FBgn0010575, intron 1 of 11) 15761 FBgn0010575 FBgn0010575 FBtr0329996 sbb protein_coding CG8478-S2-modencode_R1_peak_1250 chrX 511009 511135 + 12 NA intron (FBgn0025633, intron 1 of 9) protein_coding-intron (FBgn0025633, intron 2 of 10) 528 FBgn0025633 FBgn0025633 FBtr0110791 CG13366 protein_coding CG8478-S2-modencode_R1_peak_1404 chrX 9394911 9395062 + 12 NA promoter-TSS (FBgn0261260) protein_coding-promoter-TSS (FBgn0261260) -4765 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_878 chr3R 4642469 4642669 + 12 NA TTS (FBgn0037636) protein_coding-TTS (FBgn0037636) -2771 FBgn0262604 FBgn0262604 FBtr0305278 CG43130 protein_coding CG8478-S2-modencode_R1_peak_549 chr2R 18573978 18574111 + 12 NA exon (FBgn0020257, exon 1 of 1) protein_coding-exon (FBgn0020257, exon 1 of 1) 2434 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding CG8478-S2-modencode_R1_peak_787 chr3L 18774807 18775084 + 12 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -16101 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding CG8478-S2-modencode_R1_peak_1522 chrX 16453705 16453872 + 12 NA TTS (FBgn0030758) protein_coding-TTS (FBgn0030758) 268 FBgn0011826 FBgn0011826 FBtr0074294 Pp2B-14D protein_coding CG8478-S2-modencode_R1_peak_277 chr2R 6037306 6037456 + 12 NA intron (FBgn0033494, intron 8 of 17) protein_coding-intron (FBgn0033494, intron 8 of 13) 5001 FBgn0033494 FBgn0033494 FBtr0299832 KCNQ protein_coding CG8478-S2-modencode_R1_peak_1569 chrX 21222015 21222295 + 12 NA promoter-TSS (FBgn0003464) protein_coding-promoter-TSS (FBgn0003464) 798 FBgn0003464 FBgn0003464 FBtr0089676 sol protein_coding CG8478-S2-modencode_R1_peak_1409 chrX 9467580 9467812 + 12 NA exon (FBgn0052699, exon 5 of 7) protein_coding-exon (FBgn0052699, exon 5 of 7) 2314 FBgn0259741 FBgn0259741 FBtr0334010 CG42395 protein_coding CG8478-S2-modencode_R1_peak_123 chr2L 12529775 12530030 + 12 NA intron (FBgn0259176, intron 5 of 7) protein_coding-intron (FBgn0259176, intron 5 of 7) -13274 FBgn0261709 FBgn0261709 FBtr0303215 CR42746 ncRNA CG8478-S2-modencode_R1_peak_48 chr2L 4997400 4997693 + 12 NA promoter-TSS (FBgn0053113) protein_coding-promoter-TSS (FBgn0053113) 7382 FBgn0053113 FBgn0053113 FBtr0301538 Rtnl1 protein_coding CG8478-S2-modencode_R1_peak_95 chr2L 9567495 9567979 + 12 NA promoter-TSS (FBgn0032129) protein_coding-promoter-TSS (FBgn0032129) -2580 FBgn0032130 FBgn0032130 FBtr0079835 CG3838 protein_coding CG8478-S2-modencode_R1_peak_1322 chrX 3859227 3859329 + 12 NA promoter-TSS (FBgn0029688) protein_coding-promoter-TSS (FBgn0029688) -491 FBgn0029688 FBgn0029688 FBtr0070626 lva protein_coding CG8478-S2-modencode_R1_peak_472 chr2R 14416167 14416528 + 12 NA intron (FBgn0034356, intron 1 of 1) protein_coding-intron (FBgn0034356, intron 1 of 1) -3566 FBgn0034356 FBgn0034356 FBtr0113093 CG10924 protein_coding CG8478-S2-modencode_R1_peak_1178 chr3R 26152384 26152633 + 12 NA intron (FBgn0010113, intron 2 of 5) protein_coding-intron (FBgn0010113, intron 2 of 5) -20149 FBgn0085329 FBgn0085329 FBtr0305269 CG34300 protein_coding CG8478-S2-modencode_R1_peak_1306 chrX 3642605 3642797 + 12 NA intron (FBgn0086899, intron 1 of 9) protein_coding-intron (FBgn0086899, intron 1 of 9) -23972 FBgn0086899 FBgn0086899 FBtr0070596 tlk protein_coding CG8478-S2-modencode_R1_peak_360 chr2R 7552948 7553101 + 12 NA promoter-TSS (FBgn0050035) protein_coding-promoter-TSS (FBgn0050035) -4884 FBgn0011916 FBgn0011916 FBtr0088086 tRNA:M2:48Bb tRNA CG8478-S2-modencode_R1_peak_155 chr2L 16720857 16721205 + 12 NA intron (FBgn0000409, intron 1 of 1) protein_coding-intron (FBgn0000409, intron 1 of 1) 1157 FBgn0000409 FBgn0000409 FBtr0080889 Cyt-c-p protein_coding CG8478-S2-modencode_R1_peak_527 chr2R 17276929 17277120 + 12 NA TTS (FBgn0034628) protein_coding-TTS (FBgn0034628) 123 FBgn0034629 FBgn0034629 FBtr0071607 Acox57D-d protein_coding CG8478-S2-modencode_R1_peak_982 chr3R 11850609 11850787 + 12 NA Intergenic Intergenic -9414 FBgn0003117 FBgn0003117 FBtr0083221 pnr protein_coding CG8478-S2-modencode_R1_peak_801 chr3L 19229627 19229739 + 12 NA exon (FBgn0053647, exon 2 of 3) protein_coding-exon (FBgn0053647, exon 2 of 3) 223 FBgn0053647 FBgn0053647 FBtr0091624 CG33647 protein_coding CG8478-S2-modencode_R1_peak_34 chr2L 2175756 2175943 + 12 NA intron (FBgn0000097, intron 1 of 4) protein_coding-intron (FBgn0000097, intron 1 of 3) 2900 FBgn0000097 FBgn0000097 FBtr0330660 aop protein_coding CG8478-S2-modencode_R1_peak_577 chr3L 544909 545145 + 12 NA intron (FBgn0035142, intron 1 of 10) protein_coding-intron (FBgn0035142, intron 1 of 10) -2096 FBgn0035141 FBgn0035141 FBtr0072564 Cypl protein_coding CG8478-S2-modencode_R1_peak_1304 chrX 3637875 3638052 + 12 NA intron (FBgn0086899, intron 1 of 7) protein_coding-intron (FBgn0086899, intron 1 of 7) -24298 FBgn0015286 FBgn0015286 FBtr0070584 Rala protein_coding CG8478-S2-modencode_R1_peak_1505 chrX 15192583 15192826 + 12 NA promoter-TSS (FBgn0261703) protein_coding-promoter-TSS (FBgn0261703) -338 FBgn0261703 FBgn0261703 FBtr0331765 gce protein_coding CG8478-S2-modencode_R1_peak_421 chr2R 12050251 12050445 + 12 NA intron (FBgn0034083, intron 1 of 8) protein_coding-intron (FBgn0034083, intron 1 of 8) -4049 FBgn0034082 FBgn0034082 FBtr0087250 CG10734 protein_coding CG8478-S2-modencode_R1_peak_1497 chrX 14718097 14718311 + 12 NA intron (FBgn0003301, intron 2 of 15) protein_coding-intron (FBgn0003301, intron 2 of 17) 1734 FBgn0003301 FBgn0003301 FBtr0333655 rut protein_coding CG8478-S2-modencode_R1_peak_1128 chr3R 21847200 21847414 + 12 NA promoter-TSS (FBgn0002609) protein_coding-promoter-TSS (FBgn0002609) -130 FBgn0002609 FBgn0002609 FBtr0084958 HLHm3 protein_coding CG8478-S2-modencode_R1_peak_366 chr2R 8393630 8393864 + 12 NA intron (FBgn0045063, intron 1 of 5) protein_coding-intron (FBgn0045063, intron 1 of 5) 4564 FBgn0033748 FBgn0033748 FBtr0087945 vis protein_coding CG8478-S2-modencode_R1_peak_352 chr2R 7503609 7503704 + 12 NA promoter-TSS (FBgn0033636) protein_coding-promoter-TSS (FBgn0033636) -44 FBgn0264508 FBgn0264508 FBtr0333069 CR43907 ncRNA CG8478-S2-modencode_R1_peak_881 chr3R 4753165 4753319 + 12 NA intron (FBgn0262614, intron 1 of 13) protein_coding-intron (FBgn0262614, intron 1 of 13) -7611 FBgn0003015 FBgn0003015 FBtr0081956 osk protein_coding CG8478-S2-modencode_R1_peak_1044 chr3R 16608339 16608506 + 12 NA promoter-TSS (FBgn0038826) protein_coding-promoter-TSS (FBgn0038826) -10099 FBgn0046689 FBgn0046689 FBtr0083996 Takl1 protein_coding CG8478-S2-modencode_R1_peak_629 chr3L 3406634 3406822 + 12 NA intron (FBgn0014388, intron 1 of 1) protein_coding-intron (FBgn0014388, intron 1 of 1) 5459 FBgn0262260 FBgn0262260 FBtr0304360 mir-2282 pre_miRNA CG8478-S2-modencode_R1_peak_90 chr2L 8735373 8735750 + 12 NA intron (FBgn0003209, intron 1 of 9) protein_coding-intron (FBgn0003209, intron 1 of 8) 5099 FBgn0003209 FBgn0003209 FBtr0079746 raw protein_coding CG8478-S2-modencode_R1_peak_460 chr2R 14196927 14197087 + 12 NA intron (FBgn0010575, intron 1 of 10) protein_coding-intron (FBgn0010575, intron 1 of 11) -2320 FBgn0040737 FBgn0040737 FBtr0086763 Tango8 protein_coding CG8478-S2-modencode_R1_peak_1108 chr3R 20101486 20101652 + 12 NA promoter-TSS (FBgn0019952) protein_coding-promoter-TSS (FBgn0019952) -413 FBgn0019952 FBgn0019952 FBtr0084599 Orct protein_coding CG8478-S2-modencode_R1_peak_296 chr2R 6450918 6451072 + 12 NA intron (FBgn0263102, intron 3 of 10) protein_coding-intron (FBgn0263102, intron 3 of 9) 5602 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_1463 chrX 12485412 12485537 + 12 NA intron (FBgn0041203, intron 1 of 4) protein_coding-intron (FBgn0041203, intron 1 of 4) -2093 FBgn0041203 FBgn0041203 FBtr0301830 LIMK1 protein_coding CG8478-S2-modencode_R1_peak_668 chr3L 7857104 7857236 + 12 NA intron (FBgn0016694, intron 1 of 5) protein_coding-intron (FBgn0016694, intron 1 of 4) 3299 FBgn0016694 FBgn0016694 FBtr0332080 Pdp1 protein_coding CG8478-S2-modencode_R1_peak_587 chr3L 634544 634749 + 12 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 3395 FBgn0263342 FBgn0263342 FBtr0308776 CR43423 ncRNA CG8478-S2-modencode_R1_peak_996 chr3R 12239517 12239722 + 12 NA Intergenic Intergenic -10207 FBgn0003513 FBgn0003513 FBtr0083318 ss protein_coding CG8478-S2-modencode_R1_peak_111 chr2L 12044852 12045048 + 12 NA TTS (FBgn0032400) protein_coding-TTS (FBgn0032400) 250 FBgn0032399 FBgn0032399 FBtr0080307 CG6785 protein_coding CG8478-S2-modencode_R1_peak_387 chr2R 9806806 9806999 + 12 NA intron (FBgn0013733, intron 2 of 31) protein_coding-intron (FBgn0013733, intron 2 of 30) -8451 FBgn0013733 FBgn0013733 FBtr0304853 shot protein_coding CG8478-S2-modencode_R1_peak_703 chr3L 10848382 10848623 + 12 NA Intergenic Intergenic -3002 FBgn0026160 FBgn0026160 FBtr0076268 tna protein_coding CG8478-S2-modencode_R1_peak_680 chr3L 8684763 8684943 + 12 NA Intergenic Intergenic 15994 FBgn0001168 FBgn0001168 FBtr0076569 h protein_coding CG8478-S2-modencode_R1_peak_1467 chrX 12535427 12535903 + 12 NA intron (FBgn0030412, intron 14 of 23) protein_coding-intron (FBgn0030412, intron 13 of 22) 5236 FBgn0262187 FBgn0262187 FBtr0304204 mir-970 pre_miRNA CG8478-S2-modencode_R1_peak_1256 chrX 1170242 1170690 + 12 NA Intergenic Intergenic -1784 FBgn0028550 FBgn0028550 FBtr0330391 Atf3 protein_coding CG8478-S2-modencode_R1_peak_574 chr3L 134258 134480 + 12 NA intron (FBgn0020386, intron 1 of 5) protein_coding-intron (FBgn0020386, intron 1 of 5) 4919 FBgn0020386 FBgn0020386 FBtr0072471 Pdk1 protein_coding CG8478-S2-modencode_R1_peak_491 chr2R 15117088 15117458 + 12 NA intron (FBgn0010434, intron 2 of 14) protein_coding-intron (FBgn0010434, intron 2 of 14) 703 FBgn0010434 FBgn0010434 FBtr0301279 cora protein_coding CG8478-S2-modencode_R1_peak_1097 chr3R 19842155 19842455 + 12 NA intron (FBgn0020647, intron 2 of 10) protein_coding-intron (FBgn0020647, intron 2 of 11) -10555 FBgn0020647 FBgn0020647 FBtr0301419 KrT95D protein_coding CG8478-S2-modencode_R1_peak_675 chr3L 8074895 8075152 + 12 NA TTS (FBgn0264705) ncRNA-TTS (FBgn0264705) 1277 FBgn0264705 FBgn0264705 FBtr0333950 CR43974 ncRNA CG8478-S2-modencode_R1_peak_823 chr3L 23686107 23686329 + 12 NA Intergenic Intergenic -22173 FBgn0039977 FBgn0039977 FBtr0333911 CG17454 protein_coding CG8478-S2-modencode_R1_peak_294 chr2R 6445094 6445294 + 12 NA promoter-TSS (FBgn0263102) protein_coding-promoter-TSS (FBgn0263102) -199 FBgn0263102 FBgn0263102 FBtr0100606 psq protein_coding CG8478-S2-modencode_R1_peak_892 chr3R 5170717 5170837 + 12 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) 3182 FBgn0263749 FBgn0263749 FBtr0310401 CG43674 protein_coding CG8478-S2-modencode_R1_peak_453 chr2R 13758788 13758932 + 12 NA exon (FBgn0034282, exon 3 of 7) protein_coding-exon (FBgn0034282, exon 3 of 7) 655 FBgn0034282 FBgn0034282 FBtr0113091 Mapmodulin protein_coding CG8478-S2-modencode_R1_peak_974 chr3R 11477044 11477159 + 12 NA Intergenic Intergenic 14211 FBgn0263041 FBgn0263041 FBtr0306930 CG43336 protein_coding CG8478-S2-modencode_R1_peak_1052 chr3R 17135848 17136013 + 12 NA exon (FBgn0001234, exon 1 of 1) ncRNA-exon (FBgn0001234, exon 1 of 1) -6611 FBgn0263537 FBgn0263537 FBtr0309636 mir-4951 pre_miRNA CG8478-S2-modencode_R1_peak_200 chr2R 602152 602375 + 12 NA intron (FBgn0026401, intron 10 of 23) protein_coding-intron (FBgn0026401, intron 9 of 22) 14252 FBgn0026401 FBgn0026401 FBtr0111118 Nipped-B protein_coding CG8478-S2-modencode_R1_peak_1412 chrX 9493432 9493679 + 12 NA Intergenic Intergenic -1512 FBgn0030141 FBgn0030141 FBtr0071363 Gga protein_coding CG8478-S2-modencode_R1_peak_1205 chr4 331436 331526 + 12 NA TTS (FBgn0026777) protein_coding-TTS (FBgn0026777) 2762 FBgn0026777 FBgn0026777 FBtr0089122 Rad23 protein_coding CG8478-S2-modencode_R1_peak_94 chr2L 9449173 9449302 + 12 NA promoter-TSS (FBgn0002973) protein_coding-promoter-TSS (FBgn0002973) -593 FBgn0002973 FBgn0002973 FBtr0079822 numb protein_coding CG8478-S2-modencode_R1_peak_265 chr2R 5453201 5453377 + 12 NA TTS (FBgn0085436) protein_coding-TTS (FBgn0085436) 4146 FBgn0033423 FBgn0033423 FBtr0088520 CG1809 protein_coding CG8478-S2-modencode_R1_peak_513 chr2R 16475979 16476162 + 12 NA intron (FBgn0015907, intron 1 of 8) protein_coding-intron (FBgn0015907, intron 1 of 8) 1060 FBgn0015907 FBgn0015907 FBtr0086222 bl protein_coding CG8478-S2-modencode_R1_peak_161 chr2L 18732455 18732598 + 12 NA Intergenic Intergenic -1107 FBgn0032707 FBgn0032707 FBtr0301647 CG10348 protein_coding CG8478-S2-modencode_R1_peak_830 chr3R 96364 96463 + 12 NA intron (FBgn0037229, intron 1 of 3) protein_coding-intron (FBgn0037229, intron 1 of 3) 3719 FBgn0037228 FBgn0037228 FBtr0111222 CG1092 protein_coding CG8478-S2-modencode_R1_peak_993 chr3R 12104805 12104951 + 12 NA intron (FBgn0250823, intron 2 of 11) protein_coding-intron (FBgn0250823, intron 2 of 11) 6702 FBgn0250823 FBgn0250823 FBtr0100332 gish protein_coding CG8478-S2-modencode_R1_peak_573 chr3L 129075 129341 + 12 NA promoter-TSS (FBgn0020386) protein_coding-promoter-TSS (FBgn0020386) -242 FBgn0020386 FBgn0020386 FBtr0072471 Pdk1 protein_coding CG8478-S2-modencode_R1_peak_546 chr2R 18449013 18449147 + 12 NA promoter-TSS (FBgn0034737) protein_coding-promoter-TSS (FBgn0034737) 490 FBgn0003175 FBgn0003175 FBtr0112821 px protein_coding CG8478-S2-modencode_R1_peak_359 chr2R 7551171 7551407 + 11 NA intron (FBgn0044020, intron 3 of 3) protein_coding-intron (FBgn0044020, intron 2 of 2) -3149 FBgn0011916 FBgn0011916 FBtr0088086 tRNA:M2:48Bb tRNA CG8478-S2-modencode_R1_peak_1081 chr3R 19157145 19157298 + 11 NA intron (FBgn0003118, intron 3 of 8) protein_coding-intron (FBgn0003118, intron 3 of 8) 14663 FBgn0003118 FBgn0003118 FBtr0089715 pnt protein_coding CG8478-S2-modencode_R1_peak_497 chr2R 15301309 15301526 + 11 NA promoter-TSS (FBgn0028981) tRNA-promoter-TSS (FBgn0028981) 578 FBgn0263464 FBgn0263464 FBtr0309763 snoRNA:hts-a snoRNA CG8478-S2-modencode_R1_peak_883 chr3R 4955329 4955443 + 11 NA intron (FBgn0003165, intron 1 of 6) protein_coding-intron (FBgn0003165, intron 8 of 12) 28286 FBgn0003165 FBgn0003165 FBtr0305197 pum protein_coding CG8478-S2-modencode_R1_peak_526 chr2R 17270828 17270963 + 11 NA exon (FBgn0034626, exon 2 of 2) protein_coding-exon (FBgn0034626, exon 2 of 2) 951 FBgn0034626 FBgn0034626 FBtr0071609 CG10795 protein_coding CG8478-S2-modencode_R1_peak_399 chr2R 9971295 9971438 + 11 NA intron (FBgn0040752, intron 3 of 11) protein_coding-intron (FBgn0040752, intron 3 of 11) -6464 FBgn0259183 FBgn0259183 FBtr0299667 CG42287 protein_coding CG8478-S2-modencode_R1_peak_396 chr2R 9891115 9891323 + 11 NA intron (FBgn0002643, intron 2 of 6) protein_coding-intron (FBgn0002643, intron 2 of 6) 2267 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA CG8478-S2-modencode_R1_peak_1550 chrX 19735307 19735449 + 11 NA intron (FBgn0261811, intron 1 of 3) protein_coding-intron (FBgn0261811, intron 1 of 3) 4342 FBgn0261811 FBgn0261811 FBtr0303996 pico protein_coding CG8478-S2-modencode_R1_peak_1093 chr3R 19684714 19684850 + 11 NA TTS (FBgn0004185) snRNA-TTS (FBgn0004185) 570 FBgn0004185 FBgn0004185 FBtr0084528 snRNA:U1:95Ca snRNA CG8478-S2-modencode_R1_peak_339 chr2R 7092559 7092717 + 11 NA intron (FBgn0003396, intron 1 of 6) protein_coding-intron (FBgn0003396, intron 2 of 7) 14131 FBgn0033582 FBgn0033582 FBtr0330635 CG9084 protein_coding CG8478-S2-modencode_R1_peak_204 chr2R 1606577 1606839 + 11 NA intron (FBgn0000099, intron 1 of 7) protein_coding-intron (FBgn0000099, intron 1 of 7) -2154 FBgn0000099 FBgn0000099 FBtr0300504 ap protein_coding CG8478-S2-modencode_R1_peak_875 chr3R 4633712 4633944 + 11 NA TTS (FBgn0037634) protein_coding-TTS (FBgn0037634) 1705 FBgn0037635 FBgn0037635 FBtr0309099 CG9837 protein_coding CG8478-S2-modencode_R1_peak_532 chr2R 17403694 17403884 + 11 NA TTS (FBgn0034634) protein_coding-TTS (FBgn0034634) 2841 FBgn0034634 FBgn0034634 FBtr0071700 CG10494 protein_coding CG8478-S2-modencode_R1_peak_244 chr2R 3660402 3660561 + 11 NA intron (FBgn0050497, intron 2 of 2) protein_coding-intron (FBgn0050497, intron 2 of 2) 12230 FBgn0000337 FBgn0000337 FBtr0088931 cn protein_coding CG8478-S2-modencode_R1_peak_119 chr2L 12515000 12515125 + 11 NA intron (FBgn0259176, intron 5 of 6) protein_coding-intron (FBgn0259176, intron 6 of 7) 6954 FBgn0263458 FBgn0263458 FBtr0309757 snoRNA:CG43051-a snoRNA CG8478-S2-modencode_R1_peak_316 chr2R 6975486 6975765 + 11 NA exon (FBgn0262817, exon 2 of 2) protein_coding-exon (FBgn0262817, exon 2 of 2) -1481 FBgn0262818 FBgn0262818 FBtr0306050 CG43189 protein_coding CG8478-S2-modencode_R1_peak_397 chr2R 9894835 9895017 + 11 NA intron (FBgn0002643, intron 2 of 6) protein_coding-intron (FBgn0002643, intron 2 of 6) -1440 FBgn0263539 FBgn0263539 FBtr0309641 mir-4978 pre_miRNA CG8478-S2-modencode_R1_peak_1462 chrX 12473051 12473234 + 11 NA intron (FBgn0030400, intron 1 of 3) protein_coding-intron (FBgn0030400, intron 1 of 3) 4084 FBgn0030400 FBgn0030400 FBtr0273245 CG11138 protein_coding CG8478-S2-modencode_R1_peak_1213 chr4 1044568 1044727 + 11 NA intron (FBgn0025741, intron 1 of 9) protein_coding-intron (FBgn0025741, intron 1 of 9) 3073 FBgn0025741 FBgn0025741 FBtr0100296 plexA protein_coding CG8478-S2-modencode_R1_peak_740 chr3L 15577860 15578027 + 11 NA TTS (FBgn0036516) protein_coding-TTS (FBgn0036516) 1205 FBgn0036515 FBgn0036515 FBtr0075566 CG12304 protein_coding CG8478-S2-modencode_R1_peak_634 chr3L 3439130 3439230 + 11 NA intron (FBgn0026259, intron 7 of 8) protein_coding-intron (FBgn0026259, intron 7 of 8) -21253 FBgn0014388 FBgn0014388 FBtr0073146 sty protein_coding CG8478-S2-modencode_R1_peak_957 chr3R 9914283 9914410 + 11 NA promoter-TSS (FBgn0038198) protein_coding-promoter-TSS (FBgn0038198) -2150 FBgn0038198 FBgn0038198 FBtr0082889 Npc2b protein_coding CG8478-S2-modencode_R1_peak_1169 chr3R 25602041 25602178 + 11 NA intron (FBgn0001297, intron 1 of 2) protein_coding-intron (FBgn0001297, intron 1 of 2) 4344 FBgn0039694 FBgn0039694 FBtr0085538 fig protein_coding CG8478-S2-modencode_R1_peak_980 chr3R 11819593 11819739 + 11 NA promoter-TSS (FBgn0003507) protein_coding-promoter-TSS (FBgn0003507) 7743 FBgn0003507 FBgn0003507 FBtr0083216 srp protein_coding CG8478-S2-modencode_R1_peak_81 chr2L 8101193 8101364 + 11 NA intron (FBgn0261822, intron 2 of 7) protein_coding-intron (FBgn0261822, intron 2 of 6) 12974 FBgn0261822 FBgn0261822 FBtr0079573 Bsg protein_coding CG8478-S2-modencode_R1_peak_894 chr3R 5177169 5177329 + 11 NA intron (FBgn0263749, intron 2 of 5) protein_coding-intron (FBgn0263749, intron 1 of 4) -2741 FBgn0086053 FBgn0086053 FBtr0114329 snoRNA:Me18S-G1358a snoRNA CG8478-S2-modencode_R1_peak_1248 chrUextra 19452129 19452257 + 11 NA NA NA NA NA CG8478-S2-modencode_R1_peak_1280 chrX 3237913 3238061 + 11 NA TTS (FBgn0000479) protein_coding-TTS (FBgn0000479) -27552 FBgn0029656 FBgn0029656 FBtr0070536 CG10793 protein_coding CG8478-S2-modencode_R1_peak_1456 chrX 11510699 11510860 + 11 NA promoter-TSS (FBgn0030322) protein_coding-promoter-TSS (FBgn0030322) 620 FBgn0002723 FBgn0002723 FBtr0073521 Met protein_coding CG8478-S2-modencode_R1_peak_184 chr2L 21402559 21402686 + 11 NA Intergenic Intergenic -1493 FBgn0051616 FBgn0051616 FBtr0085889 His-Psi:CR31616 pseudogene CG8478-S2-modencode_R1_peak_166 chr2L 19158466 19158746 + 11 NA promoter-TSS (FBgn0010300) protein_coding-promoter-TSS (FBgn0010300) 23096 FBgn0032763 FBgn0032763 FBtr0081233 CG17568 protein_coding CG8478-S2-modencode_R1_peak_1041 chr3R 16373508 16373722 + 11 NA intron (FBgn0016917, intron 1 of 8) protein_coding-intron (FBgn0016917, intron 1 of 7) 3237 FBgn0016917 FBgn0016917 FBtr0100457 Stat92E protein_coding CG8478-S2-modencode_R1_peak_924 chr3R 5966443 5966647 + 11 NA exon (FBgn0037792, exon 4 of 4) protein_coding-exon (FBgn0037792, exon 4 of 4) -2264 FBgn0261817 FBgn0261817 FBtr0303304 CG42759 protein_coding CG8478-S2-modencode_R1_peak_433 chr2R 12847059 12847255 + 11 NA TTS (FBgn0034172) protein_coding-TTS (FBgn0034172) 495 FBgn0034173 FBgn0034173 FBtr0087067 CG9010 protein_coding CG8478-S2-modencode_R1_peak_500 chr2R 15337924 15338064 + 11 NA promoter-TSS (FBgn0003887) protein_coding-promoter-TSS (FBgn0003887) -918 FBgn0003887 FBgn0003887 FBtr0086537 betaTub56D protein_coding CG8478-S2-modencode_R1_peak_1186 chr3R 26598606 26598749 + 11 NA intron (FBgn0004606, intron 1 of 4) protein_coding-intron (FBgn0004606, intron 1 of 4) 7029 FBgn0004606 FBgn0004606 FBtr0085702 zfh1 protein_coding CG8478-S2-modencode_R1_peak_1236 chrU 6291557 6291705 + 11 NA NA NA NA NA CG8478-S2-modencode_R1_peak_676 chr3L 8088151 8088452 + 11 NA intron (FBgn0262579, intron 3 of 10) protein_coding-intron (FBgn0262579, intron 2 of 9) -3415 FBgn0035833 FBgn0035833 FBtr0076738 CG7565 protein_coding CG8478-S2-modencode_R1_peak_1187 chr3R 26620644 26620815 + 11 NA intron (FBgn0011739, intron 2 of 7) protein_coding-intron (FBgn0011739, intron 2 of 7) -3349 FBgn0262444 FBgn0262444 FBtr0304453 mir-1013 pre_miRNA CG8478-S2-modencode_R1_peak_788 chr3L 18779191 18779536 + 11 NA intron (FBgn0001078, intron 2 of 9) protein_coding-intron (FBgn0001078, intron 2 of 9) -20519 FBgn0001078 FBgn0001078 FBtr0075087 ftz-f1 protein_coding CG8478-S2-modencode_R1_peak_139 chr2L 15499488 15499805 + 11 NA intron (FBgn0002524, intron 1 of 3) protein_coding-intron (FBgn0002524, intron 1 of 3) 536 FBgn0002524 FBgn0002524 FBtr0080738 lace protein_coding CG8478-S2-modencode_R1_peak_1333 chrX 4831516 4831777 + 11 NA intron (FBgn0029738, intron 1 of 3) protein_coding-intron (FBgn0029738, intron 1 of 3) -1519 FBgn0004368 FBgn0004368 FBtr0301794 Ptp4E protein_coding CG8478-S2-modencode_R1_peak_66 chr2L 7064975 7065182 + 11 NA TTS (FBgn0040954) protein_coding-TTS (FBgn0040954) 759 FBgn0031886 FBgn0031886 FBtr0079424 Nuf2 protein_coding CG8478-S2-modencode_R1_peak_923 chr3R 5959739 5959873 + 11 NA promoter-TSS (FBgn0004889) protein_coding-promoter-TSS (FBgn0004889) 79 FBgn0004889 FBgn0004889 FBtr0082192 tws protein_coding CG8478-S2-modencode_R1_peak_1275 chrX 2537139 2537268 + 11 NA exon (FBgn0003371, exon 1 of 9) protein_coding-exon (FBgn0003371, exon 1 of 9) 153 FBgn0003371 FBgn0003371 FBtr0112828 sgg protein_coding CG8478-S2-modencode_R1_peak_213 chr2R 2005996 2006221 + 11 NA intron (FBgn0000546, intron 4 of 7) protein_coding-intron (FBgn0000546, intron 3 of 6) 13238 FBgn0000546 FBgn0000546 FBtr0086011 EcR protein_coding CG8478-S2-modencode_R1_peak_211 chr2R 1671348 1671511 + 11 NA Intergenic Intergenic -1069 FBgn0025693 FBgn0025693 FBtr0086056 CG11163 protein_coding CG8478-S2-modencode_R1_peak_802 chr3L 19624164 19624306 + 11 NA intron (FBgn0036896, intron 2 of 7) protein_coding-intron (FBgn0036896, intron 2 of 7) 1961 FBgn0036896 FBgn0036896 FBtr0302513 wnd protein_coding CG8478-S2-modencode_R1_peak_973 chr3R 11118618 11118865 + 11 NA intron (FBgn0003721, intron 1 of 7) protein_coding-intron (FBgn0003721, intron 3 of 9) 11469 FBgn0003721 FBgn0003721 FBtr0305656 Tm1 protein_coding CG8478-S2-modencode_R1_peak_1528 chrX 16731802 16732006 + 11 NA TTS (FBgn0024941) protein_coding-TTS (FBgn0024941) -2797 FBgn0030797 FBgn0030797 FBtr0304152 CG13004 protein_coding CG8478-S2-modencode_R1_peak_383 chr2R 9223203 9223396 + 11 NA Intergenic Intergenic -6353 FBgn0262391 FBgn0262391 FBtr0304273 mir-184 pre_miRNA CG8478-S2-modencode_R1_peak_1520 chrX 16348388 16348561 + 11 NA TTS (FBgn0262734) protein_coding-TTS (FBgn0262734) 5764 FBgn0262734 FBgn0262734 FBtr0074281 Rbp2 protein_coding CG8478-S2-modencode_R1_peak_130 chr2L 13514755 13514903 + 11 NA intron (FBgn0023407, intron 3 of 6) protein_coding-intron (FBgn0023407, intron 3 of 6) -13012 FBgn0053640 FBgn0053640 FBtr0332506 CG33640 protein_coding CG8478-S2-modencode_R1_peak_610 chr3L 2489774 2489952 + 11 NA promoter-TSS (FBgn0035346) protein_coding-promoter-TSS (FBgn0035346) -357 FBgn0035346 FBgn0035346 FBtr0072923 CG1146 protein_coding CG8478-S2-modencode_R1_peak_1351 chrX 6653287 6653435 + 11 NA promoter-TSS (FBgn0029899) protein_coding-promoter-TSS (FBgn0029899) 163 FBgn0263507 FBgn0263507 FBtr0309528 CR43496 ncRNA CG8478-S2-modencode_R1_peak_625 chr3L 3379428 3379594 + 11 NA exon (FBgn0035445, exon 2 of 4) protein_coding-exon (FBgn0035445, exon 2 of 4) 1243 FBgn0035445 FBgn0035445 FBtr0073077 CG12014 protein_coding CG8478-S2-modencode_R1_peak_1399 chrX 9386375 9386519 + 11 NA intron (FBgn0261260, intron 1 of 2) protein_coding-intron (FBgn0261260, intron 1 of 14) 3774 FBgn0261260 FBgn0261260 FBtr0302154 mgl protein_coding CG8478-S2-modencode_R1_peak_814 chr3L 21763918 21764122 + 11 NA promoter-TSS (FBgn0037130) protein_coding-promoter-TSS (FBgn0037130) -386 FBgn0037130 FBgn0037130 FBtr0333893 Syn1 protein_coding CG8478-S2-modencode_R1_peak_365 chr2R 8341596 8341745 + 11 NA intron (FBgn0010238, intron 1 of 1) protein_coding-intron (FBgn0010238, intron 1 of 1) 974 FBgn0010238 FBgn0010238 FBtr0087933 Lac protein_coding CG8478-S2-modencode_R1_peak_1117 chr3R 21156765 21156917 + 11 NA promoter-TSS (FBgn0039328) protein_coding-promoter-TSS (FBgn0039328) 83 FBgn0039328 FBgn0039328 FBtr0084849 CHKov2 protein_coding CG8478-S2-modencode_R1_peak_471 chr2R 14332398 14332521 + 11 NA TTS (FBgn0261477) protein_coding-TTS (FBgn0261477) -1616 FBgn0050120 FBgn0050120 FBtr0299806 CG30120 protein_coding CG8478-S2-modencode_R1_peak_775 chr3L 18010720 18010856 + 11 NA intron (FBgn0000568, intron 3 of 7) protein_coding-intron (FBgn0000568, intron 1 of 5) -14610 FBgn0086081 FBgn0086081 FBtr0114357 snoRNA:Me28S-A30 snoRNA CG8478-S2-modencode_R1_peak_1353 chrX 6697321 6697497 + 11 NA promoter-TSS (FBgn0029903) protein_coding-promoter-TSS (FBgn0029903) 170 FBgn0259228 FBgn0259228 FBtr0299795 C3G protein_coding CG8478-S2-modencode_R1_peak_89 chr2L 8708509 8708706 + 11 NA exon (FBgn0004914, exon 1 of 8) protein_coding-exon (FBgn0004914, exon 1 of 8) 3035 FBgn0032061 FBgn0032061 FBtr0079731 CG9314 protein_coding CG8478-S2-modencode_R1_peak_1233 chrU 5295533 5295670 + 11 NA NA NA NA NA CG8478-S2-modencode_R1_peak_596 chr3L 648793 648976 + 11 NA exon (FBgn0035147, exon 1 of 4) protein_coding-exon (FBgn0035147, exon 1 of 4) 110 FBgn0035147 FBgn0035147 FBtr0306917 Gale protein_coding CG8478-S2-modencode_R1_peak_263 chr2R 5318095 5318225 + 11 NA intron (FBgn0017558, intron 1 of 5) protein_coding-intron (FBgn0017558, intron 1 of 4) 4216 FBgn0017558 FBgn0017558 FBtr0088508 Pdk protein_coding CG8478-S2-modencode_R1_peak_1018 chr3R 13525055 13525244 + 11 NA exon (FBgn0261885, exon 6 of 16) protein_coding-exon (FBgn0261885, exon 6 of 16) -12366 FBgn0051249 FBgn0051249 FBtr0083483 CG31249 protein_coding CG8478-S2-modencode_R1_peak_1000 chr3R 12296159 12296356 + 11 NA promoter-TSS (FBgn0250754) protein_coding-promoter-TSS (FBgn0250754) 434 FBgn0027053 FBgn0027053 FBtr0083292 CSN5 protein_coding CG8478-S2-modencode_R1_peak_1523 chrX 16456460 16456564 + 11 NA exon (FBgn0030758, exon 2 of 2) protein_coding-exon (FBgn0030758, exon 2 of 2) -2456 FBgn0011826 FBgn0011826 FBtr0074294 Pp2B-14D protein_coding CG8478-S2-modencode_R1_peak_1068 chr3R 18294776 18294917 + 11 NA promoter-TSS (FBgn0038974) protein_coding-promoter-TSS (FBgn0038974) 588 FBgn0038975 FBgn0038975 FBtr0301485 Nrx-1 protein_coding CG8478-S2-modencode_R1_peak_463 chr2R 14239081 14239281 + 11 NA intron (FBgn0010575, intron 1 of 10) protein_coding-intron (FBgn0010575, intron 1 of 11) 5620 FBgn0010575 FBgn0010575 FBtr0329996 sbb protein_coding CG8478-S2-modencode_R1_peak_1090 chr3R 19201098 19201246 + 11 NA Intergenic Intergenic 1747 FBgn0262010 FBgn0262010 FBtr0303835 CG42828 protein_coding CG8478-S2-modencode_R1_peak_1009 chr3R 12828447 12828776 + 11 NA promoter-TSS (FBgn0038465) protein_coding-promoter-TSS (FBgn0038465) 12 FBgn0038465 FBgn0038465 FBtr0083371 Irc protein_coding CG8478-S2-modencode_R1_peak_144 chr2L 16272934 16273158 + 11 NA intron (FBgn0001994, intron 2 of 2) protein_coding-intron (FBgn0001994, intron 2 of 2) 10905 FBgn0028897 FBgn0028897 FBtr0080825 CG4935 protein_coding CG8478-S2-modencode_R1_peak_547 chr2R 18568438 18568625 + 11 NA Intergenic Intergenic 7947 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding CG8478-S2-modencode_R1_peak_310 chr2R 6958373 6958613 + 11 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -14598 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_1172 chr3R 26102526 26102708 + 11 NA Intergenic Intergenic -1039 FBgn0010113 FBgn0010113 FBtr0085620 hdc protein_coding CG8478-S2-modencode_R1_peak_550 chr2R 18576444 18576579 + 11 NA promoter-TSS (FBgn0020257) protein_coding-promoter-TSS (FBgn0020257) -33 FBgn0020257 FBgn0020257 FBtr0330249 ppa protein_coding CG8478-S2-modencode_R1_peak_273 chr2R 5965644 5966062 + 11 NA promoter-TSS (FBgn0033483) protein_coding-promoter-TSS (FBgn0033483) -17 FBgn0033483 FBgn0033483 FBtr0088405 egr protein_coding CG8478-S2-modencode_R1_peak_1296 chrX 3581159 3581304 + 11 NA intron (FBgn0023215, intron 2 of 8) protein_coding-intron (FBgn0023215, intron 2 of 8) -2167 FBgn0023215 FBgn0023215 FBtr0301825 Mnt protein_coding CG8478-S2-modencode_R1_peak_925 chr3R 5995984 5996099 + 11 NA TTS (FBgn0037796) protein_coding-TTS (FBgn0037796) 166 FBgn0040238 FBgn0040238 FBtr0082183 Best1 protein_coding CG8478-S2-modencode_R1_peak_220 chr2R 2054610 2054798 + 11 NA TTS (FBgn0011880) tRNA-TTS (FBgn0011880) 1048 FBgn0011880 FBgn0011880 FBtr0085984 tRNA:I:42A tRNA CG8478-S2-modencode_R1_peak_969 chr3R 10972179 10972338 + 11 NA intron (FBgn0038293, intron 1 of 4) protein_coding-intron (FBgn0038293, intron 1 of 4) 571 FBgn0038293 FBgn0038293 FBtr0083037 CG6904 protein_coding CG8478-S2-modencode_R1_peak_1016 chr3R 13511594 13511764 + 11 NA TTS (FBgn0051360) protein_coding-TTS (FBgn0051360) 855 FBgn0051360 FBgn0051360 FBtr0083480 CG31360 protein_coding CG8478-S2-modencode_R1_peak_1206 chr4 436373 436497 + 11 NA Intergenic Intergenic -10258 FBgn0263385 FBgn0263385 FBtr0309072 CR43437 ncRNA CG8478-S2-modencode_R1_peak_470 chr2R 14328592 14328769 + 11 NA promoter-TSS (FBgn0050118) protein_coding-promoter-TSS (FBgn0050118) 210 FBgn0261477 FBgn0261477 FBtr0331958 slim protein_coding CG8478-S2-modencode_R1_peak_1542 chrX 19056292 19056529 + 11 NA intron (FBgn0261461, intron 2 of 5) protein_coding-intron (FBgn0261461, intron 1 of 4) 6845 FBgn0263571 FBgn0263571 FBtr0309726 mir-4959 pre_miRNA CG8478-S2-modencode_R1_peak_1217 chr4 1269319 1269533 + 11 NA intron (FBgn0053653, intron 21 of 22) protein_coding-intron (FBgn0053653, intron 22 of 23) 34863 FBgn0053653 FBgn0053653 FBtr0307334 Caps protein_coding CG8478-S2-modencode_R1_peak_777 chr3L 18055289 18055474 + 11 NA promoter-TSS (FBgn0000568) protein_coding-promoter-TSS (FBgn0000568) 2415 FBgn0000568 FBgn0000568 FBtr0075151 Eip75B protein_coding CG8478-S2-modencode_R1_peak_415 chr2R 12014548 12014643 + 11 NA intron (FBgn0086676, intron 1 of 7) protein_coding-intron (FBgn0086676, intron 1 of 7) 2107 FBgn0086676 FBgn0086676 FBtr0089593 spin protein_coding CG8478-S2-modencode_R1_peak_784 chr3L 18750094 18750498 + 11 NA intron (FBgn0001078, intron 1 of 7) protein_coding-intron (FBgn0001078, intron 3 of 9) 8509 FBgn0036813 FBgn0036813 FBtr0075055 Aut1 protein_coding CG8478-S2-modencode_R1_peak_75 chr2L 7984560 7984661 + 11 NA promoter-TSS (FBgn0031968) protein_coding-promoter-TSS (FBgn0031968) -673 FBgn0031968 FBgn0031968 FBtr0306336 CG7231 protein_coding CG8478-S2-modencode_R1_peak_584 chr3L 630693 630980 + 11 NA exon (FBgn0263039, exon 1 of 1) ncRNA-exon (FBgn0263039, exon 1 of 1) 2366 FBgn0263039 FBgn0263039 FBtr0333724 CR43334 ncRNA CG8478-S2-modencode_R1_peak_402 chr2R 10157751 10157965 + 11 NA promoter-TSS (FBgn0261269) protein_coding-promoter-TSS (FBgn0261269) 301 FBgn0261270 FBgn0261270 FBtr0087564 SelD protein_coding CG8478-S2-modencode_R1_peak_1282 chrX 3264469 3264620 + 11 NA Intergenic Intergenic -2648 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_1491 chrX 13198309 13198422 + 11 NA promoter-TSS (FBgn0030469) protein_coding-promoter-TSS (FBgn0030469) -1187 FBgn0030469 FBgn0030469 FBtr0073759 CG15745 protein_coding CG8478-S2-modencode_R1_peak_235 chr2R 3268981 3269111 + 11 NA TTS (FBgn0000352) protein_coding-TTS (FBgn0000352) 328 FBgn0033159 FBgn0033159 FBtr0306787 Dscam protein_coding CG8478-S2-modencode_R1_peak_979 chr3R 11812921 11813150 + 11 NA intron (FBgn0003507, intron 1 of 7) protein_coding-intron (FBgn0003507, intron 1 of 7) 1112 FBgn0003507 FBgn0003507 FBtr0083216 srp protein_coding CG8478-S2-modencode_R1_peak_1268 chrX 2163687 2164181 + 11 NA intron (FBgn0023528, intron 1 of 8) protein_coding-intron (FBgn0023528, intron 1 of 8) 778 FBgn0023528 FBgn0023528 FBtr0300793 CG2924 protein_coding CG8478-S2-modencode_R1_peak_431 chr2R 12719963 12720136 + 11 NA exon (FBgn0263659, exon 1 of 1) ncRNA-exon (FBgn0263659, exon 1 of 1) 1060 FBgn0262432 FBgn0262432 FBtr0304405 mir-8 pre_miRNA CG8478-S2-modencode_R1_peak_699 chr3L 10732546 10732634 + 11 NA Intergenic Intergenic -32502 FBgn0262890 FBgn0262890 FBtr0306304 CG43245 protein_coding CG8478-S2-modencode_R1_peak_1153 chr3R 24368079 24368205 + 11 NA exon (FBgn0039588, exon 5 of 5) protein_coding-exon (FBgn0039588, exon 5 of 5) -2089 FBgn0003137 FBgn0003137 FBtr0301839 Ppn protein_coding CG8478-S2-modencode_R1_peak_986 chr3R 12031229 12031410 + 11 NA promoter-TSS (FBgn0010438) protein_coding-promoter-TSS (FBgn0010438) -346 FBgn0010438 FBgn0010438 FBtr0083277 mtSSB protein_coding CG8478-S2-modencode_R1_peak_766 chr3L 17648898 17649140 + 11 NA TTS (FBgn0036745) protein_coding-TTS (FBgn0036745) 1302 FBgn0036745 FBgn0036745 FBtr0075184 CG7484 protein_coding CG8478-S2-modencode_R1_peak_409 chr2R 10509329 10509633 + 11 NA promoter-TSS (FBgn0033948) protein_coding-promoter-TSS (FBgn0033948) -112 FBgn0082940 FBgn0082940 FBtr0113502 snoRNA:Me28S-C3227a snoRNA CG8478-S2-modencode_R1_peak_1156 chr3R 24671810 24671946 + 11 NA intron (FBgn0264324, intron 2 of 13) protein_coding-intron (FBgn0264324, intron 2 of 12) 856 FBgn0264324 FBgn0264324 FBtr0330305 spg protein_coding CG8478-S2-modencode_R1_peak_143 chr2L 16272365 16272478 + 11 NA intron (FBgn0001994, intron 2 of 2) protein_coding-intron (FBgn0001994, intron 2 of 2) 10280 FBgn0028897 FBgn0028897 FBtr0080825 CG4935 protein_coding CG8478-S2-modencode_R1_peak_783 chr3L 18611159 18611349 + 11 NA promoter-TSS (FBgn0052200) tRNA-promoter-TSS (FBgn0052200) -236 FBgn0052200 FBgn0052200 FBtr0075107 tRNA:CR32200 tRNA CG8478-S2-modencode_R1_peak_38 chr2L 3159445 3159616 + 11 NA promoter-TSS (FBgn0260817) protein_coding-promoter-TSS (FBgn0260817) -420 FBgn0260817 FBgn0260817 FBtr0077574 gkt protein_coding CG8478-S2-modencode_R1_peak_521 chr2R 17024942 17025082 + 10 NA intron (FBgn0034590, intron 2 of 5) protein_coding-intron (FBgn0034590, intron 2 of 5) -4861 FBgn0034592 FBgn0034592 FBtr0071570 CG9406 protein_coding CG8478-S2-modencode_R1_peak_287 chr2R 6417103 6417292 + 10 NA intron (FBgn0005630, intron 5 of 6) protein_coding-intron (FBgn0005630, intron 5 of 5) 5386 FBgn0005630 FBgn0005630 FBtr0089362 lola protein_coding CG8478-S2-modencode_R1_peak_733 chr3L 15097336 15097470 + 10 NA intron (FBgn0262707, intron 1 of 3) protein_coding-intron (FBgn0262707, intron 1 of 3) -1579 FBgn0262707 FBgn0262707 FBtr0075635 CTPsyn protein_coding CG8478-S2-modencode_R1_peak_555 chr2R 19539815 19539929 + 10 NA intron (FBgn0004795, intron 9 of 11) protein_coding-intron (FBgn0004795, intron 9 of 11) -5222 FBgn0034886 FBgn0034886 FBtr0072078 Pde8 protein_coding CG8478-S2-modencode_R1_peak_985 chr3R 12029911 12030034 + 10 NA TTS (FBgn0051287) protein_coding-TTS (FBgn0051287) 879 FBgn0051287 FBgn0051287 FBtr0083256 CG31287 protein_coding CG8478-S2-modencode_R1_peak_1036 chr3R 15497303 15497433 + 10 NA TTS (FBgn0012003) tRNA-TTS (FBgn0012003) 185 FBgn0051216 FBgn0051216 FBtr0083786 Naam protein_coding CG8478-S2-modencode_R1_peak_755 chr3L 17526017 17526140 + 10 NA promoter-TSS (FBgn0259174) protein_coding-promoter-TSS (FBgn0259174) 2897 FBgn0259174 FBgn0259174 FBtr0299642 Nedd4 protein_coding CG8478-S2-modencode_R1_peak_313 chr2R 6960722 6960921 + 10 NA intron (FBgn0040765, intron 2 of 4) protein_coding-intron (FBgn0040765, intron 2 of 4) -12270 FBgn0262817 FBgn0262817 FBtr0306049 CG43188 protein_coding CG8478-S2-modencode_R1_peak_272 chr2R 5965093 5965399 + 10 NA promoter-TSS (FBgn0033483) protein_coding-promoter-TSS (FBgn0033483) -624 FBgn0033483 FBgn0033483 FBtr0088405 egr protein_coding CG8478-S2-modencode_R1_peak_428 chr2R 12673242 12673409 + 10 NA intron (FBgn0034158, intron 1 of 7) protein_coding-intron (FBgn0034158, intron 1 of 7) -1355 FBgn0034158 FBgn0034158 FBtr0087031 CG5522 protein_coding CG8478-S2-modencode_R1_peak_480 chr2R 14551713 14551825 + 10 NA TTS (FBgn0053136) protein_coding-TTS (FBgn0053136) 1481 FBgn0053136 FBgn0053136 FBtr0086653 CG33136 protein_coding CG8478-S2-modencode_R1_peak_212 chr2R 1901165 1901394 + 10 NA promoter-TSS (FBgn0033050) protein_coding-promoter-TSS (FBgn0033050) 1911 FBgn0000043 FBgn0000043 FBtr0086029 Act42A protein_coding CG8478-S2-modencode_R1_peak_1047 chr3R 16786787 16787414 + 10 NA intron (FBgn0002921, intron 3 of 10) protein_coding-intron (FBgn0002921, intron 2 of 9) 12664 FBgn0002921 FBgn0002921 FBtr0089516 Atpalpha protein_coding CG8478-S2-modencode_R1_peak_198 chr2R 524444 524629 + 10 NA Intergenic Intergenic 18002 FBgn0032997 FBgn0032997 FBtr0299924 CG17486 protein_coding CG8478-S2-modencode_R1_peak_545 chr2R 18444957 18445094 + 10 NA intron (FBgn0003175, intron 2 of 14) protein_coding-intron (FBgn0003175, intron 2 of 13) 4545 FBgn0003175 FBgn0003175 FBtr0112821 px protein_coding CG8478-S2-modencode_R1_peak_1440 chrX 10373309 10373419 + 10 NA promoter-TSS (FBgn0030208) protein_coding-promoter-TSS (FBgn0030208) 498 FBgn0030208 FBgn0030208 FBtr0071452 PPP4R2r protein_coding CG8478-S2-modencode_R1_peak_917 chr3R 5914368 5914462 + 10 NA Intergenic Intergenic -2488 FBgn0262378 FBgn0262378 FBtr0304218 mir-317 pre_miRNA CG8478-S2-modencode_R1_peak_1423 chrX 9622954 9623083 + 10 NA promoter-TSS (FBgn0020378) protein_coding-promoter-TSS (FBgn0020378) -497 FBgn0263509 FBgn0263509 FBtr0309530 CR43498 ncRNA CG8478-S2-modencode_R1_peak_1508 chrX 15659625 15659787 + 10 NA exon (FBgn0030688, exon 2 of 2) protein_coding-exon (FBgn0030688, exon 2 of 2) 772 FBgn0030688 FBgn0030688 FBtr0074193 CG8952 protein_coding CG8478-S2-modencode_R1_peak_434 chr2R 12850888 12851049 + 10 NA Intergenic Intergenic -3316 FBgn0034173 FBgn0034173 FBtr0087067 CG9010 protein_coding CG8478-S2-modencode_R1_peak_904 chr3R 5362884 5363090 + 10 NA TTS (FBgn0037705) protein_coding-TTS (FBgn0037705) -4253 FBgn0000244 FBgn0000244 FBtr0301093 by protein_coding CG8478-S2-modencode_R1_peak_20 chr2L 1650634 1650762 + 10 NA promoter-TSS (FBgn0086758) protein_coding-promoter-TSS (FBgn0086758) -560 FBgn0086758 FBgn0086758 FBtr0077878 chinmo protein_coding CG8478-S2-modencode_R1_peak_83 chr2L 8419484 8419655 + 10 NA promoter-TSS (FBgn0027932) protein_coding-promoter-TSS (FBgn0027932) 3879 FBgn0027932 FBgn0027932 FBtr0079666 Akap200 protein_coding CG8478-S2-modencode_R1_peak_290 chr2R 6418986 6419142 + 10 NA TTS (FBgn0005630) protein_coding-TTS (FBgn0005630) 3519 FBgn0005630 FBgn0005630 FBtr0089362 lola protein_coding CG8478-S2-modencode_R1_peak_192 chr2L 22260870 22260993 + 10 NA Intergenic Intergenic 11053 FBgn0032988 FBgn0032988 FBtr0331294 Tif-IA protein_coding CG8478-S2-modencode_R1_peak_1442 chrX 10386975 10387109 + 10 NA exon (FBgn0085443, exon 1 of 3) protein_coding-exon (FBgn0085443, exon 1 of 3) -6382 FBgn0052687 FBgn0052687 FBtr0071458 CG32687 protein_coding CG8478-S2-modencode_R1_peak_525 chr2R 17269584 17269729 + 10 NA Intergenic Intergenic 2190 FBgn0034626 FBgn0034626 FBtr0071609 CG10795 protein_coding CG8478-S2-modencode_R1_peak_179 chr2L 20863706 20863886 + 10 NA promoter-TSS (FBgn0032898) pseudogene-promoter-TSS (FBgn0032898) -21 FBgn0032898 FBgn0032898 FBtr0081448 CR9337 pseudogene CG8478-S2-modencode_R1_peak_1283 chrX 3271919 3272095 + 10 NA intron (FBgn0262656, intron 2 of 2) protein_coding-intron (FBgn0262656, intron 2 of 2) 4815 FBgn0262656 FBgn0262656 FBtr0070525 dm protein_coding CG8478-S2-modencode_R1_peak_903 chr3R 5360317 5360454 + 10 NA Intergenic Intergenic -1651 FBgn0000244 FBgn0000244 FBtr0301093 by protein_coding CG8478-S2-modencode_R1_peak_975 chr3R 11478065 11478235 + 10 NA Intergenic Intergenic -13755 FBgn0053207 FBgn0053207 FBtr0083162 pxb protein_coding CG8478-S2-modencode_R1_peak_486 chr2R 14685059 14685208 + 10 NA promoter-TSS (FBgn0034392) protein_coding-promoter-TSS (FBgn0034392) -1008 FBgn0034392 FBgn0034392 FBtr0086637 MFS15 protein_coding