BEAF-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 24032337 flagstat_total: 38692906 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 38456617 mapped_passed_pct: 99.39 paired in sequencing_failed: 0 paired in sequencing_passed: 38692906 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 38279084 properly paired_passed_pct: 98.93 read1_failed: 0 read1_passed: 19346453 read2_failed: 0 read2_passed: 19346453 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 79459 singletons_passed_pct: 0.21 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 38692906 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 38377158 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 34019 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 61276 CBP-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 3135079 flagstat_total: 24330962 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 24100393 mapped_passed_pct: 99.05 paired in sequencing_failed: 0 paired in sequencing_passed: 24330962 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 23583842 properly paired_passed_pct: 96.93 read1_failed: 0 read1_passed: 12165481 read2_failed: 0 read2_passed: 12165481 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 109967 singletons_passed_pct: 0.45 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 24330962 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 23990426 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 83785 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 185196 CBP-Kc167-li2015_R2: duplicates_failed: 0 duplicates_passed: 1727258 flagstat_total: 14954812 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 14826605 mapped_passed_pct: 99.14 paired in sequencing_failed: 0 paired in sequencing_passed: 14954812 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 14595802 properly paired_passed_pct: 97.6 read1_failed: 0 read1_passed: 7477406 read2_failed: 0 read2_passed: 7477406 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 43917 singletons_passed_pct: 0.29 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 14954812 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 14782688 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 32383 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 81094 CBP-Kc167-li2015_R3: duplicates_failed: 0 duplicates_passed: 8204117 flagstat_total: 51481532 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 49194544 mapped_passed_pct: 95.56 paired in sequencing_failed: 0 paired in sequencing_passed: 51481532 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 48331814 properly paired_passed_pct: 93.88 read1_failed: 0 read1_passed: 25740766 read2_failed: 0 read2_passed: 25740766 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 267660 singletons_passed_pct: 0.52 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 51481532 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 48926884 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 89861 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 233998 CP190-Kc167-bortle2014_R1: duplicates_failed: 0 duplicates_passed: 50946532 flagstat_total: 69722888 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 65374794 mapped_passed_pct: 93.76 paired in sequencing_failed: 0 paired in sequencing_passed: 69722888 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 64783608 properly paired_passed_pct: 92.92 read1_failed: 0 read1_passed: 34861444 read2_failed: 0 read2_passed: 34861444 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 290214 singletons_passed_pct: 0.42 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 69722888 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 65084580 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 85519 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 168506 CP190-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 50946532 flagstat_total: 69722888 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 65374794 mapped_passed_pct: 93.76 paired in sequencing_failed: 0 paired in sequencing_passed: 69722888 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 64783608 properly paired_passed_pct: 92.92 read1_failed: 0 read1_passed: 34861444 read2_failed: 0 read2_passed: 34861444 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 290214 singletons_passed_pct: 0.42 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 69722888 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 65084580 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 85519 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 168506 CTCF-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 2220865 flagstat_total: 22849282 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 22589136 mapped_passed_pct: 98.86 paired in sequencing_failed: 0 paired in sequencing_passed: 22849282 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 22129476 properly paired_passed_pct: 96.85 read1_failed: 0 read1_passed: 11424641 read2_failed: 0 read2_passed: 11424641 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 86246 singletons_passed_pct: 0.38 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 22849282 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 22502890 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 50732 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 132730 CapH2-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 7895250 flagstat_total: 29795764 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 26187682 mapped_passed_pct: 87.89 paired in sequencing_failed: 0 paired in sequencing_passed: 29795764 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 25821582 properly paired_passed_pct: 86.66 read1_failed: 0 read1_passed: 14897882 read2_failed: 0 read2_passed: 14897882 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 83564 singletons_passed_pct: 0.28 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 29795764 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 26104118 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 27396 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 74480 CapH2-Kc167-li2015_R2: duplicates_failed: 0 duplicates_passed: 32699112 flagstat_total: 45057914 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 43394119 mapped_passed_pct: 96.31 paired in sequencing_failed: 0 paired in sequencing_passed: 45057914 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 42961060 properly paired_passed_pct: 95.35 read1_failed: 0 read1_passed: 22528957 read2_failed: 0 read2_passed: 22528957 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 138489 singletons_passed_pct: 0.31 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 45057914 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 43255630 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 77011 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 187930 Chromator-Kc167-bortle2014_R1: duplicates_failed: 0 duplicates_passed: 4481112 flagstat_total: 33900472 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 5467526 mapped_passed_pct: 16.13 paired in sequencing_failed: 0 paired in sequencing_passed: 33900472 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 5102800 properly paired_passed_pct: 15.05 read1_failed: 0 read1_passed: 16950236 read2_failed: 0 read2_passed: 16950236 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 299408 singletons_passed_pct: 0.88 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 33900472 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 5168118 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 11484 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 25630 Chromator-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 9551669 flagstat_total: 25244002 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 23042117 mapped_passed_pct: 91.28 paired in sequencing_failed: 0 paired in sequencing_passed: 25244002 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 22699314 properly paired_passed_pct: 89.92 read1_failed: 0 read1_passed: 12622001 read2_failed: 0 read2_passed: 12622001 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 73809 singletons_passed_pct: 0.29 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 25244002 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 22968308 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 48387 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 111460 Chromator-Kc167-li2015_R2: duplicates_failed: 0 duplicates_passed: 4481112 flagstat_total: 33900472 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 5467526 mapped_passed_pct: 16.13 paired in sequencing_failed: 0 paired in sequencing_passed: 33900472 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 5102800 properly paired_passed_pct: 15.05 read1_failed: 0 read1_passed: 16950236 read2_failed: 0 read2_passed: 16950236 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 299408 singletons_passed_pct: 0.88 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 33900472 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 5168118 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 11484 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 25630 Cohesin-Rad21-Kc167-bortle2014_R1: duplicates_failed: 0 duplicates_passed: 9675191 flagstat_total: 37870016 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 36344415 mapped_passed_pct: 95.97 paired in sequencing_failed: 0 paired in sequencing_passed: 37870016 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 36059008 properly paired_passed_pct: 95.22 read1_failed: 0 read1_passed: 18935008 read2_failed: 0 read2_passed: 18935008 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 95697 singletons_passed_pct: 0.25 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 37870016 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 36248718 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 52523 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 121718 CondensinI-Barren-Kc167-bortle2014_R1: duplicates_failed: 0 duplicates_passed: 1321607 flagstat_total: 30524154 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 28873540 mapped_passed_pct: 94.59 paired in sequencing_failed: 0 paired in sequencing_passed: 30524154 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 28736666 properly paired_passed_pct: 94.14 read1_failed: 0 read1_passed: 15262077 read2_failed: 0 read2_passed: 15262077 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 52842 singletons_passed_pct: 0.17 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 30524154 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 28820698 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 21146 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 48648 CondensinI-CAPH2-Kc167-bortle2014_R1: duplicates_failed: 0 duplicates_passed: 19746081 flagstat_total: 32188970 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 31748818 mapped_passed_pct: 98.63 paired in sequencing_failed: 0 paired in sequencing_passed: 32188970 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 31496940 properly paired_passed_pct: 97.85 read1_failed: 0 read1_passed: 16094485 read2_failed: 0 read2_passed: 16094485 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 80692 singletons_passed_pct: 0.25 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 32188970 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 31668126 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 43703 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 99908 DREF-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 17537599 flagstat_total: 40000146 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 39598475 mapped_passed_pct: 99.0 paired in sequencing_failed: 0 paired in sequencing_passed: 40000146 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 39351252 properly paired_passed_pct: 98.38 read1_failed: 0 read1_passed: 20000073 read2_failed: 0 read2_passed: 20000073 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 102279 singletons_passed_pct: 0.26 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 40000146 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 39496196 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 34743 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 84666 Fs1h-L-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 3024970 flagstat_total: 41765644 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 41626691 mapped_passed_pct: 99.67 paired in sequencing_failed: 0 paired in sequencing_passed: 41765644 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 41429318 properly paired_passed_pct: 99.19 read1_failed: 0 read1_passed: 20882822 read2_failed: 0 read2_passed: 20882822 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 74629 singletons_passed_pct: 0.18 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 41765644 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 41552062 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 26532 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 65382 Fs1h-L-Kc167-li2015_R2: duplicates_failed: 0 duplicates_passed: 8582162 flagstat_total: 36036412 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 30583265 mapped_passed_pct: 84.87 paired in sequencing_failed: 0 paired in sequencing_passed: 36036412 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 30391226 properly paired_passed_pct: 84.33 read1_failed: 0 read1_passed: 18018206 read2_failed: 0 read2_passed: 18018206 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 73797 singletons_passed_pct: 0.2 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 36036412 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 30509468 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 29812 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 69358 GAF-Kc167-bortle2014_R1: duplicates_failed: 0 duplicates_passed: 2119444 flagstat_total: 42828204 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 3218535 mapped_passed_pct: 7.51 paired in sequencing_failed: 0 paired in sequencing_passed: 42828204 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 2772834 properly paired_passed_pct: 6.47 read1_failed: 0 read1_passed: 21414102 read2_failed: 0 read2_passed: 21414102 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 412017 singletons_passed_pct: 0.96 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 42828204 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 2806518 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 3626 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 7084 GAF-Kc167-cubenas-potts2017_R1: duplicates_failed: 0 duplicates_passed: 4077680 flagstat_total: 26595658 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 25979727 mapped_passed_pct: 97.68 paired in sequencing_failed: 0 paired in sequencing_passed: 26595658 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 25836910 properly paired_passed_pct: 97.15 read1_failed: 0 read1_passed: 13297829 read2_failed: 0 read2_passed: 13297829 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 40377 singletons_passed_pct: 0.15 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 26595658 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 25939350 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 35601 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 65214 H2Av-Kc167-rowley2017_R1: duplicates_failed: 0 duplicates_passed: 22386406 flagstat_total: 35748776 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 35311947 mapped_passed_pct: 98.78 paired in sequencing_failed: 0 paired in sequencing_passed: 35748776 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 34675772 properly paired_passed_pct: 97.0 read1_failed: 0 read1_passed: 17874388 read2_failed: 0 read2_passed: 17874388 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 311967 singletons_passed_pct: 0.87 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 35748776 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 34999980 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 64742 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 121474 H2Bub-Kc167-rowley2017_R1: duplicates_failed: 0 duplicates_passed: 421718 flagstat_total: 24704364 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 24527186 mapped_passed_pct: 99.28 paired in sequencing_failed: 0 paired in sequencing_passed: 24704364 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 24259842 properly paired_passed_pct: 98.2 read1_failed: 0 read1_passed: 12352182 read2_failed: 0 read2_passed: 12352182 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 106620 singletons_passed_pct: 0.43 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 24704364 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 24420566 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 44227 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 89590 H3.3-Kc167-rowley2017_R1: duplicates_failed: 0 duplicates_passed: 14442429 flagstat_total: 49322188 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 48854597 mapped_passed_pct: 99.05 paired in sequencing_failed: 0 paired in sequencing_passed: 49322188 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 48305854 properly paired_passed_pct: 97.94 read1_failed: 0 read1_passed: 24661094 read2_failed: 0 read2_passed: 24661094 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 309205 singletons_passed_pct: 0.63 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 49322188 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 48545392 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 74177 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 166842 H3K27me3-Kc167-cubenas-potts2017_R1: duplicates_failed: 0 duplicates_passed: 144425 flagstat_total: 16200898 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 16110999 mapped_passed_pct: 99.45 paired in sequencing_failed: 0 paired in sequencing_passed: 16200898 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 15832058 properly paired_passed_pct: 97.72 read1_failed: 0 read1_passed: 8100449 read2_failed: 0 read2_passed: 8100449 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 55133 singletons_passed_pct: 0.34 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 16200898 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 16055866 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 34479 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 76542 H3K27me3-Kc167-cubenas-potts2017_R2: duplicates_failed: 0 duplicates_passed: 573707 flagstat_total: 27030772 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 26868821 mapped_passed_pct: 99.4 paired in sequencing_failed: 0 paired in sequencing_passed: 27030772 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 26520346 properly paired_passed_pct: 98.11 read1_failed: 0 read1_passed: 13515386 read2_failed: 0 read2_passed: 13515386 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 113137 singletons_passed_pct: 0.42 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 27030772 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 26755684 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 50044 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 117352 H3K36me3-Kc167-rowley2017_R1: duplicates_failed: 0 duplicates_passed: 2822507 flagstat_total: 24514094 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 24319531 mapped_passed_pct: 99.21 paired in sequencing_failed: 0 paired in sequencing_passed: 24514094 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 23925882 properly paired_passed_pct: 97.6 read1_failed: 0 read1_passed: 12257047 read2_failed: 0 read2_passed: 12257047 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 75085 singletons_passed_pct: 0.31 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 24514094 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 24244446 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 41861 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 138388 H3K4me1-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 330808 flagstat_total: 21581162 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 21465392 mapped_passed_pct: 99.46 paired in sequencing_failed: 0 paired in sequencing_passed: 21581162 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 21102662 properly paired_passed_pct: 97.78 read1_failed: 0 read1_passed: 10790581 read2_failed: 0 read2_passed: 10790581 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 84118 singletons_passed_pct: 0.39 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 21581162 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 21381274 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 64636 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 151680 H3K4me3-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 150797 flagstat_total: 15224526 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 15159982 mapped_passed_pct: 99.58 paired in sequencing_failed: 0 paired in sequencing_passed: 15224526 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 14967834 properly paired_passed_pct: 98.31 read1_failed: 0 read1_passed: 7612263 read2_failed: 0 read2_passed: 7612263 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 47172 singletons_passed_pct: 0.31 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 15224526 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 15112810 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 28539 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 64960 H3K9me2-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 3489051 flagstat_total: 21443924 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 21208245 mapped_passed_pct: 98.9 paired in sequencing_failed: 0 paired in sequencing_passed: 21443924 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 20104492 properly paired_passed_pct: 93.75 read1_failed: 0 read1_passed: 10721962 read2_failed: 0 read2_passed: 10721962 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 109603 singletons_passed_pct: 0.51 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 21443924 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 21098642 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 183943 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 366076 H3K9me3-Kc167-rowley2017_R1: duplicates_failed: 0 duplicates_passed: 1984623 flagstat_total: 13732550 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 13648950 mapped_passed_pct: 99.39 paired in sequencing_failed: 0 paired in sequencing_passed: 13732550 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 13456880 properly paired_passed_pct: 97.99 read1_failed: 0 read1_passed: 6866275 read2_failed: 0 read2_passed: 6866275 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 35210 singletons_passed_pct: 0.26 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 13732550 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 13613740 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 17146 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 74636 H4K20me1-Kc167-rowley2017_R1: duplicates_failed: 0 duplicates_passed: 662812 flagstat_total: 16843248 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 16740553 mapped_passed_pct: 99.39 paired in sequencing_failed: 0 paired in sequencing_passed: 16843248 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 16579188 properly paired_passed_pct: 98.43 read1_failed: 0 read1_passed: 8421624 read2_failed: 0 read2_passed: 8421624 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 52677 singletons_passed_pct: 0.31 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 16843248 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 16687876 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 27245 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 62034 Histone3-Kc167-cubenas-potts2017_R1: duplicates_failed: 0 duplicates_passed: 2607874 flagstat_total: 23143174 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 23012561 mapped_passed_pct: 99.44 paired in sequencing_failed: 0 paired in sequencing_passed: 23143174 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 22701566 properly paired_passed_pct: 98.09 read1_failed: 0 read1_passed: 11571587 read2_failed: 0 read2_passed: 11571587 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 47139 singletons_passed_pct: 0.2 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 23143174 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 22965422 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 17446 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 67096 Ibf1-Kc167-cubenas-potts2017_R1: duplicates_failed: 0 duplicates_passed: 6739910 flagstat_total: 41785156 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 39936678 mapped_passed_pct: 95.58 paired in sequencing_failed: 0 paired in sequencing_passed: 41785156 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 38928936 properly paired_passed_pct: 93.16 read1_failed: 0 read1_passed: 20892578 read2_failed: 0 read2_passed: 20892578 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 276700 singletons_passed_pct: 0.66 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 41785156 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 39659978 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 78930 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 213232 Ibf2-Kc167-cubenas-potts2017_R1: duplicates_failed: 0 duplicates_passed: 7557790 flagstat_total: 45165070 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 43203424 mapped_passed_pct: 95.66 paired in sequencing_failed: 0 paired in sequencing_passed: 45165070 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 42304418 properly paired_passed_pct: 93.67 read1_failed: 0 read1_passed: 22582535 read2_failed: 0 read2_passed: 22582535 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 234162 singletons_passed_pct: 0.52 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 45165070 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 42969262 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 75840 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 213134 L3mbt-Kc167-corces2012_R1: duplicates_failed: 0 duplicates_passed: 19250522 flagstat_total: 40419992 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 36668011 mapped_passed_pct: 90.72 paired in sequencing_failed: 0 paired in sequencing_passed: 40419992 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 36400708 properly paired_passed_pct: 90.06 read1_failed: 0 read1_passed: 20209996 read2_failed: 0 read2_passed: 20209996 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 127203 singletons_passed_pct: 0.31 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 40419992 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 36540808 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 36009 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 79846 L3mbt-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 19250522 flagstat_total: 40419992 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 36668011 mapped_passed_pct: 90.72 paired in sequencing_failed: 0 paired in sequencing_passed: 40419992 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 36400708 properly paired_passed_pct: 90.06 read1_failed: 0 read1_passed: 20209996 read2_failed: 0 read2_passed: 20209996 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 127203 singletons_passed_pct: 0.31 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 40419992 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 36540808 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 36009 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 79846 Modmdg42.2-Kc167-corces2012_R1: duplicates_failed: 0 duplicates_passed: 23545937 flagstat_total: 51585098 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 38188539 mapped_passed_pct: 74.03 paired in sequencing_failed: 0 paired in sequencing_passed: 51585098 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 37930820 properly paired_passed_pct: 73.53 read1_failed: 0 read1_passed: 25792549 read2_failed: 0 read2_passed: 25792549 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 134759 singletons_passed_pct: 0.26 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 51585098 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 38053780 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 32157 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 65164 Modmdg4BTB-Kc167-corces2012_R1: duplicates_failed: 0 duplicates_passed: 60800931 flagstat_total: 134888024 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 120316091 mapped_passed_pct: 89.2 paired in sequencing_failed: 0 paired in sequencing_passed: 134888024 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 119721000 properly paired_passed_pct: 88.76 read1_failed: 0 read1_passed: 67444012 read2_failed: 0 read2_passed: 67444012 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 333025 singletons_passed_pct: 0.25 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 134888024 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 119983066 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 72034 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 148654 Nup98-Kc167-cubenas-potts2017_R1: duplicates_failed: 0 duplicates_passed: 19752162 flagstat_total: 49628910 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 45468074 mapped_passed_pct: 91.62 paired in sequencing_failed: 0 paired in sequencing_passed: 49628910 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 45154832 properly paired_passed_pct: 90.98 read1_failed: 0 read1_passed: 24814455 read2_failed: 0 read2_passed: 24814455 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 149178 singletons_passed_pct: 0.3 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 49628910 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 45318896 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 40964 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 94912 Pc-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 3211132 flagstat_total: 37728314 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 37367330 mapped_passed_pct: 99.04 paired in sequencing_failed: 0 paired in sequencing_passed: 37728314 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 36635192 properly paired_passed_pct: 97.1 read1_failed: 0 read1_passed: 18864157 read2_failed: 0 read2_passed: 18864157 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 170776 singletons_passed_pct: 0.45 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 37728314 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 37196554 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 131025 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 280402 Pc-Kc167-li2015_R2: duplicates_failed: 0 duplicates_passed: 1116404 flagstat_total: 25031154 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 24825705 mapped_passed_pct: 99.18 paired in sequencing_failed: 0 paired in sequencing_passed: 25031154 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 24318628 properly paired_passed_pct: 97.15 read1_failed: 0 read1_passed: 12515577 read2_failed: 0 read2_passed: 12515577 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 110675 singletons_passed_pct: 0.44 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 25031154 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 24715030 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 71191 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 144328 Pita-Kc167-cubenas-potts2017_R1: duplicates_failed: 0 duplicates_passed: 19420894 flagstat_total: 46005740 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 44402396 mapped_passed_pct: 96.51 paired in sequencing_failed: 0 paired in sequencing_passed: 46005740 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 43144590 properly paired_passed_pct: 93.78 read1_failed: 0 read1_passed: 23002870 read2_failed: 0 read2_passed: 23002870 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 223260 singletons_passed_pct: 0.49 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 46005740 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 44179136 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 169954 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 361258 RNAPII-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 2349054 flagstat_total: 17792190 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 17596109 mapped_passed_pct: 98.9 paired in sequencing_failed: 0 paired in sequencing_passed: 17792190 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 17542058 properly paired_passed_pct: 98.59 read1_failed: 0 read1_passed: 8896095 read2_failed: 0 read2_passed: 8896095 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 20555 singletons_passed_pct: 0.12 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 17792190 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 17575554 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 11350 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 21560 Rad21-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 8829938 flagstat_total: 42918596 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 10547799 mapped_passed_pct: 24.58 paired in sequencing_failed: 0 paired in sequencing_passed: 42918596 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 10273950 properly paired_passed_pct: 23.94 read1_failed: 0 read1_passed: 21459298 read2_failed: 0 read2_passed: 21459298 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 141161 singletons_passed_pct: 0.33 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 42918596 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 10406638 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 30767 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 64370 Rad21-Kc167-li2015_R2: duplicates_failed: 0 duplicates_passed: 9675191 flagstat_total: 37870016 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 36344415 mapped_passed_pct: 95.97 paired in sequencing_failed: 0 paired in sequencing_passed: 37870016 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 36059008 properly paired_passed_pct: 95.22 read1_failed: 0 read1_passed: 18935008 read2_failed: 0 read2_passed: 18935008 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 95697 singletons_passed_pct: 0.25 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 37870016 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 36248718 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 52523 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 121718 Rad21-Kc167-li2015_R3: duplicates_failed: 0 duplicates_passed: 5989853 flagstat_total: 29739876 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 7377168 mapped_passed_pct: 24.81 paired in sequencing_failed: 0 paired in sequencing_passed: 29739876 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 7174282 properly paired_passed_pct: 24.12 read1_failed: 0 read1_passed: 14869938 read2_failed: 0 read2_passed: 14869938 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 101334 singletons_passed_pct: 0.34 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 29739876 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 7275834 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 22913 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 47864 TFIIIC-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 8173644 flagstat_total: 24528664 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 22595184 mapped_passed_pct: 92.12 paired in sequencing_failed: 0 paired in sequencing_passed: 24528664 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 22433668 properly paired_passed_pct: 91.46 read1_failed: 0 read1_passed: 12264332 read2_failed: 0 read2_passed: 12264332 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 82284 singletons_passed_pct: 0.34 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 24528664 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 22512900 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 17962 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 43942 TFIIIC-Kc167-li2015_R2: duplicates_failed: 0 duplicates_passed: 2900189 flagstat_total: 15126510 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 14430423 mapped_passed_pct: 95.4 paired in sequencing_failed: 0 paired in sequencing_passed: 15126510 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 14151904 properly paired_passed_pct: 93.56 read1_failed: 0 read1_passed: 7563255 read2_failed: 0 read2_passed: 7563255 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 56415 singletons_passed_pct: 0.37 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 15126510 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 14374008 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 21251 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 81518 Z4-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 5374460 flagstat_total: 38335902 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 38120554 mapped_passed_pct: 99.44 paired in sequencing_failed: 0 paired in sequencing_passed: 38335902 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 37903228 properly paired_passed_pct: 98.87 read1_failed: 0 read1_passed: 19167951 read2_failed: 0 read2_passed: 19167951 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 86990 singletons_passed_pct: 0.23 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 38335902 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 38033564 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 35621 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 80228 ZIPIC-Kc167-cubenas-potts2017_R1: duplicates_failed: 0 duplicates_passed: 10795811 flagstat_total: 45198564 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 44189250 mapped_passed_pct: 97.77 paired in sequencing_failed: 0 paired in sequencing_passed: 45198564 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 43262586 properly paired_passed_pct: 95.72 read1_failed: 0 read1_passed: 22599282 read2_failed: 0 read2_passed: 22599282 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 173604 singletons_passed_pct: 0.38 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 45198564 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 44015646 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 88380 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 224606 dTFIIIC220-Kc167-bortle2014_R1: duplicates_failed: 0 duplicates_passed: 6627517 flagstat_total: 22582030 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 18407544 mapped_passed_pct: 81.51 paired in sequencing_failed: 0 paired in sequencing_passed: 22582030 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 18286956 properly paired_passed_pct: 80.98 read1_failed: 0 read1_passed: 11291015 read2_failed: 0 read2_passed: 11291015 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 54852 singletons_passed_pct: 0.24 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 22582030 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 18352692 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 18478 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 39190 dTFIIIC220-Kc167-bortle2014_R2: duplicates_failed: 0 duplicates_passed: 6865679 flagstat_total: 28611140 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 8316843 mapped_passed_pct: 29.07 paired in sequencing_failed: 0 paired in sequencing_passed: 28611140 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 7999486 properly paired_passed_pct: 27.96 read1_failed: 0 read1_passed: 14305570 read2_failed: 0 read2_passed: 14305570 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 174059 singletons_passed_pct: 0.61 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 28611140 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 8142784 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 22103 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 66226 dTFIIIC220-Kc167-bortle2014_R3: duplicates_failed: 0 duplicates_passed: 12833806 flagstat_total: 51740732 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 51322779 mapped_passed_pct: 99.19 paired in sequencing_failed: 0 paired in sequencing_passed: 51740732 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 50982606 properly paired_passed_pct: 98.53 read1_failed: 0 read1_passed: 25870366 read2_failed: 0 read2_passed: 25870366 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 127277 singletons_passed_pct: 0.25 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 51740732 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 51195502 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 48674 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 117504 input-Kc167-li2015_R1: duplicates_failed: 0 duplicates_passed: 4654915 flagstat_total: 49798004 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 26924417 mapped_passed_pct: 54.07 paired in sequencing_failed: 0 paired in sequencing_passed: 49798004 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 26450960 properly paired_passed_pct: 53.12 read1_failed: 0 read1_passed: 24899002 read2_failed: 0 read2_passed: 24899002 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 209323 singletons_passed_pct: 0.42 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 49798004 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 26715094 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 29175 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 90084 input-Kc167-li2015_R2: duplicates_failed: 0 duplicates_passed: 4918656 flagstat_total: 28272418 mapped_failed: 0 mapped_failed_pct: .nan mapped_passed: 27600957 mapped_passed_pct: 97.63 paired in sequencing_failed: 0 paired in sequencing_passed: 28272418 properly paired_failed: 0 properly paired_failed_pct: .nan properly paired_passed: 27227318 properly paired_passed_pct: 96.3 read1_failed: 0 read1_passed: 14136209 read2_failed: 0 read2_passed: 14136209 secondary_failed: 0 secondary_passed: 0 singletons_failed: 0 singletons_failed_pct: .nan singletons_passed: 85833 singletons_passed_pct: 0.3 supplementary_failed: 0 supplementary_passed: 0 total_failed: 0 total_passed: 28272418 with itself and mate mapped_failed: 0 with itself and mate mapped_passed: 27515124 with mate mapped to a different chr (mapQ >= 5)_failed: 0 with mate mapped to a different chr (mapQ >= 5)_passed: 30934 with mate mapped to a different chr_failed: 0 with mate mapped to a different chr_passed: 93516