BEAF-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.471463 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 3.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000202 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 561773159.0 PF_HQ_ALIGNED_BASES: 559133652.0 PF_HQ_ALIGNED_Q20_BASES: 556675825.0 PF_HQ_ALIGNED_READS: 11345934.0 PF_HQ_ERROR_RATE: 0.004368 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000265 PF_MISMATCH_RATE: 0.004387 PF_NOISE_READS: 0.0 PF_READS: 11401234.0 PF_READS_ALIGNED: 11401234.0 PF_READS_IMPROPER_PAIRS: 2300.0 READS_ALIGNED_IN_PAIRS: 11401234.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 11401234.0 CBP-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.162152 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 8.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.00827 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 790380395.0 PF_HQ_ALIGNED_BASES: 783086552.0 PF_HQ_ALIGNED_Q20_BASES: 769769618.0 PF_HQ_ALIGNED_READS: 16009367.0 PF_HQ_ERROR_RATE: 0.006513 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000453 PF_MISMATCH_RATE: 0.006516 PF_NOISE_READS: 0.0 PF_READS: 16160934.0 PF_READS_ALIGNED: 16160934.0 PF_READS_IMPROPER_PAIRS: 133654.0 READS_ALIGNED_IN_PAIRS: 16160934.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 16160934.0 CBP-Kc167-li2015_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.333192 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.006076 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 445523269.0 PF_HQ_ALIGNED_BASES: 436486927.0 PF_HQ_ALIGNED_Q20_BASES: 432003555.0 PF_HQ_ALIGNED_READS: 8898154.0 PF_HQ_ERROR_RATE: 0.008545 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000448 PF_MISMATCH_RATE: 0.008556 PF_NOISE_READS: 0.0 PF_READS: 9084314.0 PF_READS_ALIGNED: 9084314.0 PF_READS_IMPROPER_PAIRS: 55200.0 READS_ALIGNED_IN_PAIRS: 9084314.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 9084314.0 CBP-Kc167-li2015_R3: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.01796 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.007411 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1364888592.0 PF_HQ_ALIGNED_BASES: 1336722640.0 PF_HQ_ALIGNED_Q20_BASES: 1305448291.0 PF_HQ_ALIGNED_READS: 27438474.0 PF_HQ_ERROR_RATE: 0.008463 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000396 PF_MISMATCH_RATE: 0.008497 PF_NOISE_READS: 0.0 PF_READS: 28025892.0 PF_READS_ALIGNED: 28025892.0 PF_READS_IMPROPER_PAIRS: 207712.0 READS_ALIGNED_IN_PAIRS: 28025892.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 28025892.0 CP190-Kc167-bortle2014_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.339174 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 2.4e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.001003 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 484568736.0 PF_HQ_ALIGNED_BASES: 480945737.0 PF_HQ_ALIGNED_Q20_BASES: 477373234.0 PF_HQ_ALIGNED_READS: 9818810.0 PF_HQ_ERROR_RATE: 0.006544 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000337 PF_MISMATCH_RATE: 0.006551 PF_NOISE_READS: 0.0 PF_READS: 9896030.0 PF_READS_ALIGNED: 9896030.0 PF_READS_IMPROPER_PAIRS: 9922.0 READS_ALIGNED_IN_PAIRS: 9896030.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 9896030.0 CP190-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.339174 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 2.4e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.001003 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 484568736.0 PF_HQ_ALIGNED_BASES: 480945737.0 PF_HQ_ALIGNED_Q20_BASES: 477373234.0 PF_HQ_ALIGNED_READS: 9818810.0 PF_HQ_ERROR_RATE: 0.006544 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000337 PF_MISMATCH_RATE: 0.006551 PF_NOISE_READS: 0.0 PF_READS: 9896030.0 PF_READS_ALIGNED: 9896030.0 PF_READS_IMPROPER_PAIRS: 9922.0 READS_ALIGNED_IN_PAIRS: 9896030.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 9896030.0 CTCF-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.250043 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.009377 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 694449874.0 PF_HQ_ALIGNED_BASES: 679150649.0 PF_HQ_ALIGNED_Q20_BASES: 669921032.0 PF_HQ_ALIGNED_READS: 13862675.0 PF_HQ_ERROR_RATE: 0.006686 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000365 PF_MISMATCH_RATE: 0.006709 PF_NOISE_READS: 0.0 PF_READS: 14178544.0 PF_READS_ALIGNED: 14178544.0 PF_READS_IMPROPER_PAIRS: 132956.0 READS_ALIGNED_IN_PAIRS: 14178544.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 14178544.0 CapH2-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.357998 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.011499 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 623043960.0 PF_HQ_ALIGNED_BASES: 613258406.0 PF_HQ_ALIGNED_Q20_BASES: 608223028.0 PF_HQ_ALIGNED_READS: 12487955.0 PF_HQ_ERROR_RATE: 0.006775 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000384 PF_MISMATCH_RATE: 0.006795 PF_NOISE_READS: 0.0 PF_READS: 12690480.0 PF_READS_ALIGNED: 12690480.0 PF_READS_IMPROPER_PAIRS: 145934.0 READS_ALIGNED_IN_PAIRS: 12690480.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 12690480.0 CapH2-Kc167-li2015_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.552182 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000379 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 230087870.0 PF_HQ_ALIGNED_BASES: 225444511.0 PF_HQ_ALIGNED_Q20_BASES: 224716099.0 PF_HQ_ALIGNED_READS: 4613392.0 PF_HQ_ERROR_RATE: 0.008831 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000327 PF_MISMATCH_RATE: 0.008887 PF_NOISE_READS: 0.0 PF_READS: 4711226.0 PF_READS_ALIGNED: 4711226.0 PF_READS_IMPROPER_PAIRS: 1786.0 READS_ALIGNED_IN_PAIRS: 4711226.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 4711226.0 Chromator-Kc167-bortle2014_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.4399 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 1.1e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000789 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 20984809.0 PF_HQ_ALIGNED_BASES: 20491645.0 PF_HQ_ALIGNED_Q20_BASES: 20434445.0 PF_HQ_ALIGNED_READS: 423511.0 PF_HQ_ERROR_RATE: 0.006257 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000388 PF_MISMATCH_RATE: 0.006497 PF_NOISE_READS: 0.0 PF_READS: 435974.0 PF_READS_ALIGNED: 435974.0 PF_READS_IMPROPER_PAIRS: 344.0 READS_ALIGNED_IN_PAIRS: 435974.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 435974.0 Chromator-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.432123 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.008726 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 420294817.0 PF_HQ_ALIGNED_BASES: 412579224.0 PF_HQ_ALIGNED_Q20_BASES: 410139380.0 PF_HQ_ALIGNED_READS: 8392580.0 PF_HQ_ERROR_RATE: 0.007857 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000426 PF_MISMATCH_RATE: 0.007864 PF_NOISE_READS: 0.0 PF_READS: 8551636.0 PF_READS_ALIGNED: 8551636.0 PF_READS_IMPROPER_PAIRS: 74618.0 READS_ALIGNED_IN_PAIRS: 8551636.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 8551636.0 Chromator-Kc167-li2015_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.4399 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 1.1e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000789 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 20984809.0 PF_HQ_ALIGNED_BASES: 20491645.0 PF_HQ_ALIGNED_Q20_BASES: 20434445.0 PF_HQ_ALIGNED_READS: 423511.0 PF_HQ_ERROR_RATE: 0.006257 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000388 PF_MISMATCH_RATE: 0.006497 PF_NOISE_READS: 0.0 PF_READS: 435974.0 PF_READS_ALIGNED: 435974.0 PF_READS_IMPROPER_PAIRS: 344.0 READS_ALIGNED_IN_PAIRS: 435974.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 435974.0 Cohesin-Rad21-Kc167-bortle2014_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.275237 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 8.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000404 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 908418502.0 PF_HQ_ALIGNED_BASES: 895154968.0 PF_HQ_ALIGNED_Q20_BASES: 883271898.0 PF_HQ_ALIGNED_READS: 18250198.0 PF_HQ_ERROR_RATE: 0.005016 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000362 PF_MISMATCH_RATE: 0.005041 PF_NOISE_READS: 0.0 PF_READS: 18524830.0 PF_READS_ALIGNED: 18524830.0 PF_READS_IMPROPER_PAIRS: 7484.0 READS_ALIGNED_IN_PAIRS: 18524830.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 18524830.0 CondensinI-Barren-Kc167-bortle2014_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.311544 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000232 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1066757685.0 PF_HQ_ALIGNED_BASES: 1054470971.0 PF_HQ_ALIGNED_Q20_BASES: 1042933956.0 PF_HQ_ALIGNED_READS: 21457351.0 PF_HQ_ERROR_RATE: 0.005485 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.00024 PF_MISMATCH_RATE: 0.005497 PF_NOISE_READS: 0.0 PF_READS: 21710606.0 PF_READS_ALIGNED: 21710606.0 PF_READS_IMPROPER_PAIRS: 5034.0 READS_ALIGNED_IN_PAIRS: 21710606.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 21710606.0 CondensinI-CAPH2-Kc167-bortle2014_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.457876 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 8.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000344 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 348937051.0 PF_HQ_ALIGNED_BASES: 343206729.0 PF_HQ_ALIGNED_Q20_BASES: 341991136.0 PF_HQ_ALIGNED_READS: 6970571.0 PF_HQ_ERROR_RATE: 0.004973 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000315 PF_MISMATCH_RATE: 0.005019 PF_NOISE_READS: 0.0 PF_READS: 7089644.0 PF_READS_ALIGNED: 7089644.0 PF_READS_IMPROPER_PAIRS: 2442.0 READS_ALIGNED_IN_PAIRS: 7089644.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 7089644.0 DREF-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.359958 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000291 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 704222799.0 PF_HQ_ALIGNED_BASES: 693594808.0 PF_HQ_ALIGNED_Q20_BASES: 687032914.0 PF_HQ_ALIGNED_READS: 14113370.0 PF_HQ_ERROR_RATE: 0.004815 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000313 PF_MISMATCH_RATE: 0.004837 PF_NOISE_READS: 0.0 PF_READS: 14333186.0 PF_READS_ALIGNED: 14333186.0 PF_READS_IMPROPER_PAIRS: 4176.0 READS_ALIGNED_IN_PAIRS: 14333186.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 14333186.0 Fs1h-L-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.227355 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000295 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1456840950.0 PF_HQ_ALIGNED_BASES: 1436459699.0 PF_HQ_ALIGNED_Q20_BASES: 1415113282.0 PF_HQ_ALIGNED_READS: 29295355.0 PF_HQ_ERROR_RATE: 0.004796 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000221 PF_MISMATCH_RATE: 0.004821 PF_NOISE_READS: 0.0 PF_READS: 29716430.0 PF_READS_ALIGNED: 29716430.0 PF_READS_IMPROPER_PAIRS: 8752.0 READS_ALIGNED_IN_PAIRS: 29716430.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 29716430.0 Fs1h-L-Kc167-li2015_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.289232 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000367 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 771077205.0 PF_HQ_ALIGNED_BASES: 759852361.0 PF_HQ_ALIGNED_Q20_BASES: 750065859.0 PF_HQ_ALIGNED_READS: 15480796.0 PF_HQ_ERROR_RATE: 0.004926 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000304 PF_MISMATCH_RATE: 0.004958 PF_NOISE_READS: 0.0 PF_READS: 15713490.0 PF_READS_ALIGNED: 15713490.0 PF_READS_IMPROPER_PAIRS: 5764.0 READS_ALIGNED_IN_PAIRS: 15713490.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 15713490.0 GAF-Kc167-bortle2014_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.072616 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 3.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000642 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 28390543.0 PF_HQ_ALIGNED_BASES: 27124012.0 PF_HQ_ALIGNED_Q20_BASES: 26776630.0 PF_HQ_ALIGNED_READS: 660086.0 PF_HQ_ERROR_RATE: 0.013315 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000599 PF_MISMATCH_RATE: 0.013939 PF_NOISE_READS: 0.0 PF_READS: 703650.0 PF_READS_ALIGNED: 703650.0 PF_READS_IMPROPER_PAIRS: 452.0 READS_ALIGNED_IN_PAIRS: 703650.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 703650.0 GAF-Kc167-cubenas-potts2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.248868 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.00025 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 812434873.0 PF_HQ_ALIGNED_BASES: 806814914.0 PF_HQ_ALIGNED_Q20_BASES: 797762104.0 PF_HQ_ALIGNED_READS: 16438400.0 PF_HQ_ERROR_RATE: 0.00411 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000317 PF_MISMATCH_RATE: 0.004116 PF_NOISE_READS: 0.0 PF_READS: 16555624.0 PF_READS_ALIGNED: 16555624.0 PF_READS_IMPROPER_PAIRS: 4140.0 READS_ALIGNED_IN_PAIRS: 16555624.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 16555624.0 H2Av-Kc167-rowley2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.275645 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000258 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 485809333.0 PF_HQ_ALIGNED_BASES: 482558721.0 PF_HQ_ALIGNED_Q20_BASES: 477602534.0 PF_HQ_ALIGNED_READS: 9852852.0 PF_HQ_ERROR_RATE: 0.004578 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000226 PF_MISMATCH_RATE: 0.004584 PF_NOISE_READS: 0.0 PF_READS: 9922256.0 PF_READS_ALIGNED: 9922256.0 PF_READS_IMPROPER_PAIRS: 2564.0 READS_ALIGNED_IN_PAIRS: 9922256.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 9922256.0 H2Bub-Kc167-rowley2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 48.745786 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 4.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.001868 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 978182556.0 PF_HQ_ALIGNED_BASES: 973110195.0 PF_HQ_ALIGNED_Q20_BASES: 913095286.0 PF_HQ_ALIGNED_READS: 20042446.0 PF_HQ_ERROR_RATE: 0.006381 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000315 PF_MISMATCH_RATE: 0.006385 PF_NOISE_READS: 0.0 PF_READS: 20148698.0 PF_READS_ALIGNED: 20148698.0 PF_READS_IMPROPER_PAIRS: 37636.0 READS_ALIGNED_IN_PAIRS: 20148698.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 20148698.0 H3.3-Kc167-rowley2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.108048 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000315 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1204158436.0 PF_HQ_ALIGNED_BASES: 1194083538.0 PF_HQ_ALIGNED_Q20_BASES: 1174185383.0 PF_HQ_ALIGNED_READS: 24432242.0 PF_HQ_ERROR_RATE: 0.004972 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000298 PF_MISMATCH_RATE: 0.004988 PF_NOISE_READS: 0.0 PF_READS: 24643578.0 PF_READS_ALIGNED: 24643578.0 PF_READS_IMPROPER_PAIRS: 7760.0 READS_ALIGNED_IN_PAIRS: 24643578.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 24643578.0 H3K27me3-Kc167-cubenas-potts2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.317049 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.008229 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 633319485.0 PF_HQ_ALIGNED_BASES: 626163777.0 PF_HQ_ALIGNED_Q20_BASES: 619180572.0 PF_HQ_ALIGNED_READS: 12770405.0 PF_HQ_ERROR_RATE: 0.008451 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000388 PF_MISMATCH_RATE: 0.008444 PF_NOISE_READS: 0.0 PF_READS: 12917802.0 PF_READS_ALIGNED: 12917802.0 PF_READS_IMPROPER_PAIRS: 106304.0 READS_ALIGNED_IN_PAIRS: 12917802.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 12917802.0 H3K27me3-Kc167-cubenas-potts2017_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.221358 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.002355 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1053067395.0 PF_HQ_ALIGNED_BASES: 1042640357.0 PF_HQ_ALIGNED_Q20_BASES: 1027060631.0 PF_HQ_ALIGNED_READS: 21301608.0 PF_HQ_ERROR_RATE: 0.006474 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000392 PF_MISMATCH_RATE: 0.006473 PF_NOISE_READS: 0.0 PF_READS: 21517338.0 PF_READS_ALIGNED: 21517338.0 PF_READS_IMPROPER_PAIRS: 50668.0 READS_ALIGNED_IN_PAIRS: 21517338.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 21517338.0 H3K36me3-Kc167-rowley2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 48.997399 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.006457 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 665640141.0 PF_HQ_ALIGNED_BASES: 640843005.0 PF_HQ_ALIGNED_Q20_BASES: 616118896.0 PF_HQ_ALIGNED_READS: 13122156.0 PF_HQ_ERROR_RATE: 0.00533 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000259 PF_MISMATCH_RATE: 0.005374 PF_NOISE_READS: 0.0 PF_READS: 13635196.0 PF_READS_ALIGNED: 13635196.0 PF_READS_IMPROPER_PAIRS: 88044.0 READS_ALIGNED_IN_PAIRS: 13635196.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 13635196.0 H3K4me1-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.21836 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.00354 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 826322788.0 PF_HQ_ALIGNED_BASES: 818237763.0 PF_HQ_ALIGNED_Q20_BASES: 805822653.0 PF_HQ_ALIGNED_READS: 16710615.0 PF_HQ_ERROR_RATE: 0.005964 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000361 PF_MISMATCH_RATE: 0.005967 PF_NOISE_READS: 0.0 PF_READS: 16877914.0 PF_READS_ALIGNED: 16877914.0 PF_READS_IMPROPER_PAIRS: 59744.0 READS_ALIGNED_IN_PAIRS: 16877914.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 16877914.0 H3K4me3-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.195756 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.003306 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 627882691.0 PF_HQ_ALIGNED_BASES: 624141330.0 PF_HQ_ALIGNED_Q20_BASES: 614204447.0 PF_HQ_ALIGNED_READS: 12732674.0 PF_HQ_ERROR_RATE: 0.005315 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000242 PF_MISMATCH_RATE: 0.005318 PF_NOISE_READS: 0.0 PF_READS: 12810146.0 PF_READS_ALIGNED: 12810146.0 PF_READS_IMPROPER_PAIRS: 42356.0 READS_ALIGNED_IN_PAIRS: 12810146.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 12810146.0 H3K9me2-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.304551 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 3.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.00157 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 305739808.0 PF_HQ_ALIGNED_BASES: 274047341.0 PF_HQ_ALIGNED_Q20_BASES: 271711385.0 PF_HQ_ALIGNED_READS: 5600130.0 PF_HQ_ERROR_RATE: 0.002958 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 9.7e-05 PF_MISMATCH_RATE: 0.003049 PF_NOISE_READS: 0.0 PF_READS: 6249026.0 PF_READS_ALIGNED: 6249026.0 PF_READS_IMPROPER_PAIRS: 9808.0 READS_ALIGNED_IN_PAIRS: 6249026.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 6249026.0 H3K9me3-Kc167-rowley2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.060548 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 1.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.003784 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 203803052.0 PF_HQ_ALIGNED_BASES: 179295998.0 PF_HQ_ALIGNED_Q20_BASES: 174606553.0 PF_HQ_ALIGNED_READS: 3665438.0 PF_HQ_ERROR_RATE: 0.006837 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000218 PF_MISMATCH_RATE: 0.007018 PF_NOISE_READS: 0.0 PF_READS: 4170640.0 PF_READS_ALIGNED: 4170640.0 PF_READS_IMPROPER_PAIRS: 15780.0 READS_ALIGNED_IN_PAIRS: 4170640.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 4170640.0 H4K20me1-Kc167-rowley2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.015407 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.001514 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 596747358.0 PF_HQ_ALIGNED_BASES: 588736493.0 PF_HQ_ALIGNED_Q20_BASES: 565346252.0 PF_HQ_ALIGNED_READS: 12060945.0 PF_HQ_ERROR_RATE: 0.005886 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000288 PF_MISMATCH_RATE: 0.00589 PF_NOISE_READS: 0.0 PF_READS: 12226728.0 PF_READS_ALIGNED: 12226728.0 PF_READS_IMPROPER_PAIRS: 18508.0 READS_ALIGNED_IN_PAIRS: 12226728.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 12226728.0 Histone3-Kc167-cubenas-potts2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 48.833149 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.00887 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 686206294.0 PF_HQ_ALIGNED_BASES: 674715001.0 PF_HQ_ALIGNED_Q20_BASES: 654313863.0 PF_HQ_ALIGNED_READS: 13886612.0 PF_HQ_ERROR_RATE: 0.005364 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000297 PF_MISMATCH_RATE: 0.00537 PF_NOISE_READS: 0.0 PF_READS: 14124780.0 PF_READS_ALIGNED: 14124780.0 PF_READS_IMPROPER_PAIRS: 125280.0 READS_ALIGNED_IN_PAIRS: 14124780.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 14124780.0 Ibf1-Kc167-cubenas-potts2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.226676 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 1.5e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.012575 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1306487897.0 PF_HQ_ALIGNED_BASES: 1294137768.0 PF_HQ_ALIGNED_Q20_BASES: 1260793078.0 PF_HQ_ALIGNED_READS: 26506577.0 PF_HQ_ERROR_RATE: 0.008055 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000466 PF_MISMATCH_RATE: 0.008063 PF_NOISE_READS: 0.0 PF_READS: 26765182.0 PF_READS_ALIGNED: 26765182.0 PF_READS_IMPROPER_PAIRS: 336578.0 READS_ALIGNED_IN_PAIRS: 26765182.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 26765182.0 Ibf2-Kc167-cubenas-potts2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.236135 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 1.0e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.010806 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1298889440.0 PF_HQ_ALIGNED_BASES: 1280819701.0 PF_HQ_ALIGNED_Q20_BASES: 1248206687.0 PF_HQ_ALIGNED_READS: 26196126.0 PF_HQ_ERROR_RATE: 0.007652 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000447 PF_MISMATCH_RATE: 0.007662 PF_NOISE_READS: 0.0 PF_READS: 26571590.0 PF_READS_ALIGNED: 26571590.0 PF_READS_IMPROPER_PAIRS: 287122.0 READS_ALIGNED_IN_PAIRS: 26571590.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 26571590.0 L3mbt-Kc167-corces2012_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.184808 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 8.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000227 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 532805591.0 PF_HQ_ALIGNED_BASES: 525598820.0 PF_HQ_ALIGNED_Q20_BASES: 519832722.0 PF_HQ_ALIGNED_READS: 10763389.0 PF_HQ_ERROR_RATE: 0.005254 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.00028 PF_MISMATCH_RATE: 0.005277 PF_NOISE_READS: 0.0 PF_READS: 10916510.0 PF_READS_ALIGNED: 10916510.0 PF_READS_IMPROPER_PAIRS: 2482.0 READS_ALIGNED_IN_PAIRS: 10916510.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 10916510.0 L3mbt-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.184808 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 8.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000227 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 532805591.0 PF_HQ_ALIGNED_BASES: 525598820.0 PF_HQ_ALIGNED_Q20_BASES: 519832722.0 PF_HQ_ALIGNED_READS: 10763389.0 PF_HQ_ERROR_RATE: 0.005254 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.00028 PF_MISMATCH_RATE: 0.005277 PF_NOISE_READS: 0.0 PF_READS: 10916510.0 PF_READS_ALIGNED: 10916510.0 PF_READS_IMPROPER_PAIRS: 2482.0 READS_ALIGNED_IN_PAIRS: 10916510.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 10916510.0 Modmdg42.2-Kc167-corces2012_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.2179 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 3.1e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000577 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 421302895.0 PF_HQ_ALIGNED_BASES: 416646195.0 PF_HQ_ALIGNED_Q20_BASES: 413340228.0 PF_HQ_ALIGNED_READS: 8544519.0 PF_HQ_ERROR_RATE: 0.004902 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000299 PF_MISMATCH_RATE: 0.004927 PF_NOISE_READS: 0.0 PF_READS: 8644994.0 PF_READS_ALIGNED: 8644994.0 PF_READS_IMPROPER_PAIRS: 4984.0 READS_ALIGNED_IN_PAIRS: 8644994.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 8644994.0 Modmdg4BTB-Kc167-corces2012_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.176646 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 1.8e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000409 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 2053553834.0 PF_HQ_ALIGNED_BASES: 2034170627.0 PF_HQ_ALIGNED_Q20_BASES: 2003754128.0 PF_HQ_ALIGNED_READS: 41563593.0 PF_HQ_ERROR_RATE: 0.005241 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.00027 PF_MISMATCH_RATE: 0.005247 PF_NOISE_READS: 0.0 PF_READS: 41970090.0 PF_READS_ALIGNED: 41970090.0 PF_READS_IMPROPER_PAIRS: 17146.0 READS_ALIGNED_IN_PAIRS: 41970090.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 41970090.0 Nup98-Kc167-cubenas-potts2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.037736 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000193 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 857498889.0 PF_HQ_ALIGNED_BASES: 847026575.0 PF_HQ_ALIGNED_Q20_BASES: 833602461.0 PF_HQ_ALIGNED_READS: 17379209.0 PF_HQ_ERROR_RATE: 0.005663 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000265 PF_MISMATCH_RATE: 0.005677 PF_NOISE_READS: 0.0 PF_READS: 17599870.0 PF_READS_ALIGNED: 17599870.0 PF_READS_IMPROPER_PAIRS: 3404.0 READS_ALIGNED_IN_PAIRS: 17599870.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 17599870.0 Pc-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.158073 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.006497 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1351829542.0 PF_HQ_ALIGNED_BASES: 1343257676.0 PF_HQ_ALIGNED_Q20_BASES: 1319431217.0 PF_HQ_ALIGNED_READS: 27476096.0 PF_HQ_ERROR_RATE: 0.006628 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.00045 PF_MISMATCH_RATE: 0.006635 PF_NOISE_READS: 0.0 PF_READS: 27655150.0 PF_READS_ALIGNED: 27655150.0 PF_READS_IMPROPER_PAIRS: 179674.0 READS_ALIGNED_IN_PAIRS: 27655150.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 27655150.0 Pc-Kc167-li2015_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.109649 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.010068 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 911185055.0 PF_HQ_ALIGNED_BASES: 901587430.0 PF_HQ_ALIGNED_Q20_BASES: 879939229.0 PF_HQ_ALIGNED_READS: 18456571.0 PF_HQ_ERROR_RATE: 0.008776 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000414 PF_MISMATCH_RATE: 0.008782 PF_NOISE_READS: 0.0 PF_READS: 18655528.0 PF_READS_ALIGNED: 18655528.0 PF_READS_IMPROPER_PAIRS: 187820.0 READS_ALIGNED_IN_PAIRS: 18655528.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 18655528.0 Pita-Kc167-cubenas-potts2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.335087 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 9.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.023026 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 775903579.0 PF_HQ_ALIGNED_BASES: 762110039.0 PF_HQ_ALIGNED_Q20_BASES: 748898002.0 PF_HQ_ALIGNED_READS: 15552406.0 PF_HQ_ERROR_RATE: 0.00787 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000471 PF_MISMATCH_RATE: 0.007874 PF_NOISE_READS: 0.0 PF_READS: 15838268.0 PF_READS_ALIGNED: 15838268.0 PF_READS_IMPROPER_PAIRS: 364690.0 READS_ALIGNED_IN_PAIRS: 15838268.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 15838268.0 RNAPII-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.275021 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000115 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 638542901.0 PF_HQ_ALIGNED_BASES: 635964654.0 PF_HQ_ALIGNED_Q20_BASES: 628945766.0 PF_HQ_ALIGNED_READS: 12932794.0 PF_HQ_ERROR_RATE: 0.00404 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000152 PF_MISMATCH_RATE: 0.004044 PF_NOISE_READS: 0.0 PF_READS: 12986144.0 PF_READS_ALIGNED: 12986144.0 PF_READS_IMPROPER_PAIRS: 1498.0 READS_ALIGNED_IN_PAIRS: 12986144.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 12986144.0 Rad21-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.305969 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 1.5e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.00092 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 22234963.0 PF_HQ_ALIGNED_BASES: 21595309.0 PF_HQ_ALIGNED_Q20_BASES: 21440690.0 PF_HQ_ALIGNED_READS: 442192.0 PF_HQ_ERROR_RATE: 0.005009 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000389 PF_MISMATCH_RATE: 0.005145 PF_NOISE_READS: 0.0 PF_READS: 456334.0 PF_READS_ALIGNED: 456334.0 PF_READS_IMPROPER_PAIRS: 420.0 READS_ALIGNED_IN_PAIRS: 456334.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 456334.0 Rad21-Kc167-li2015_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.275237 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 8.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000404 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 908418502.0 PF_HQ_ALIGNED_BASES: 895154968.0 PF_HQ_ALIGNED_Q20_BASES: 883271898.0 PF_HQ_ALIGNED_READS: 18250198.0 PF_HQ_ERROR_RATE: 0.005016 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000362 PF_MISMATCH_RATE: 0.005041 PF_NOISE_READS: 0.0 PF_READS: 18524830.0 PF_READS_ALIGNED: 18524830.0 PF_READS_IMPROPER_PAIRS: 7484.0 READS_ALIGNED_IN_PAIRS: 18524830.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 18524830.0 Rad21-Kc167-li2015_R3: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.383633 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 2.0e-05 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000389 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 19325729.0 PF_HQ_ALIGNED_BASES: 18721744.0 PF_HQ_ALIGNED_Q20_BASES: 18634873.0 PF_HQ_ALIGNED_READS: 383092.0 PF_HQ_ERROR_RATE: 0.00513 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000389 PF_MISMATCH_RATE: 0.005271 PF_NOISE_READS: 0.0 PF_READS: 396246.0 PF_READS_ALIGNED: 396246.0 PF_READS_IMPROPER_PAIRS: 154.0 READS_ALIGNED_IN_PAIRS: 396246.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 396246.0 TFIIIC-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.210561 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000431 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 472620830.0 PF_HQ_ALIGNED_BASES: 465010463.0 PF_HQ_ALIGNED_Q20_BASES: 458540573.0 PF_HQ_ALIGNED_READS: 9492726.0 PF_HQ_ERROR_RATE: 0.005318 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000295 PF_MISMATCH_RATE: 0.005368 PF_NOISE_READS: 0.0 PF_READS: 9652122.0 PF_READS_ALIGNED: 9652122.0 PF_READS_IMPROPER_PAIRS: 4164.0 READS_ALIGNED_IN_PAIRS: 9652122.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 9652122.0 TFIIIC-Kc167-li2015_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.19212 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 4.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.009623 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 383561719.0 PF_HQ_ALIGNED_BASES: 376225283.0 PF_HQ_ALIGNED_Q20_BASES: 368701041.0 PF_HQ_ALIGNED_READS: 7689158.0 PF_HQ_ERROR_RATE: 0.009023 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.0004 PF_MISMATCH_RATE: 0.009056 PF_NOISE_READS: 0.0 PF_READS: 7841488.0 PF_READS_ALIGNED: 7841488.0 PF_READS_IMPROPER_PAIRS: 75462.0 READS_ALIGNED_IN_PAIRS: 7841488.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 7841488.0 Z4-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.237265 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 6.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000236 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1224428590.0 PF_HQ_ALIGNED_BASES: 1208887608.0 PF_HQ_ALIGNED_Q20_BASES: 1189159581.0 PF_HQ_ALIGNED_READS: 24650718.0 PF_HQ_ERROR_RATE: 0.005005 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000267 PF_MISMATCH_RATE: 0.005025 PF_NOISE_READS: 0.0 PF_READS: 24971920.0 PF_READS_ALIGNED: 24971920.0 PF_READS_IMPROPER_PAIRS: 5898.0 READS_ALIGNED_IN_PAIRS: 24971920.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 24971920.0 ZIPIC-Kc167-cubenas-potts2017_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.265806 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.014143 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1208969300.0 PF_HQ_ALIGNED_BASES: 1192605034.0 PF_HQ_ALIGNED_Q20_BASES: 1163855506.0 PF_HQ_ALIGNED_READS: 24340469.0 PF_HQ_ERROR_RATE: 0.007092 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000432 PF_MISMATCH_RATE: 0.007113 PF_NOISE_READS: 0.0 PF_READS: 24679844.0 PF_READS_ALIGNED: 24679844.0 PF_READS_IMPROPER_PAIRS: 349042.0 READS_ALIGNED_IN_PAIRS: 24679844.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 24679844.0 dTFIIIC220-Kc167-bortle2014_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.359605 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000395 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 396131364.0 PF_HQ_ALIGNED_BASES: 390126496.0 PF_HQ_ALIGNED_Q20_BASES: 386951507.0 PF_HQ_ALIGNED_READS: 7940792.0 PF_HQ_ERROR_RATE: 0.00484 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.00029 PF_MISMATCH_RATE: 0.00488 PF_NOISE_READS: 0.0 PF_READS: 8065714.0 PF_READS_ALIGNED: 8065714.0 PF_READS_IMPROPER_PAIRS: 3188.0 READS_ALIGNED_IN_PAIRS: 8065714.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 8065714.0 dTFIIIC220-Kc167-bortle2014_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.367245 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 8.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000337 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 18446356.0 PF_HQ_ALIGNED_BASES: 17826632.0 PF_HQ_ALIGNED_Q20_BASES: 17738214.0 PF_HQ_ALIGNED_READS: 366167.0 PF_HQ_ERROR_RATE: 0.00553 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000367 PF_MISMATCH_RATE: 0.00573 PF_NOISE_READS: 0.0 PF_READS: 380166.0 PF_READS_ALIGNED: 380166.0 PF_READS_IMPROPER_PAIRS: 128.0 READS_ALIGNED_IN_PAIRS: 380166.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 380166.0 dTFIIIC220-Kc167-bortle2014_R3: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.258081 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 7.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.000346 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 1330730390.0 PF_HQ_ALIGNED_BASES: 1308776287.0 PF_HQ_ALIGNED_Q20_BASES: 1289580273.0 PF_HQ_ALIGNED_READS: 26685100.0 PF_HQ_ERROR_RATE: 0.005067 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000314 PF_MISMATCH_RATE: 0.005102 PF_NOISE_READS: 0.0 PF_READS: 27140336.0 PF_READS_ALIGNED: 27140336.0 PF_READS_IMPROPER_PAIRS: 9392.0 READS_ALIGNED_IN_PAIRS: 27140336.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 27140336.0 input-Kc167-li2015_R1: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.1854 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 5.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.007151 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 732860389.0 PF_HQ_ALIGNED_BASES: 716722938.0 PF_HQ_ALIGNED_Q20_BASES: 702000771.0 PF_HQ_ALIGNED_READS: 14685089.0 PF_HQ_ERROR_RATE: 0.009395 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000421 PF_MISMATCH_RATE: 0.009437 PF_NOISE_READS: 0.0 PF_READS: 15036074.0 PF_READS_ALIGNED: 15036074.0 PF_READS_IMPROPER_PAIRS: 107526.0 READS_ALIGNED_IN_PAIRS: 15036074.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 15036074.0 input-Kc167-li2015_R2: BAD_CYCLES: 0.0 CATEGORY: PAIR LIBRARY: '' MEAN_READ_LENGTH: 49.248548 PCT_ADAPTER: 0.0 PCT_CHIMERAS: 4.0e-06 PCT_PF_READS: 1.0 PCT_PF_READS_ALIGNED: 1.0 PCT_PF_READS_IMPROPER_PAIRS: 0.007709 PCT_READS_ALIGNED_IN_PAIRS: 1.0 PF_ALIGNED_BASES: 753124223.0 PF_HQ_ALIGNED_BASES: 737867693.0 PF_HQ_ALIGNED_Q20_BASES: 727684434.0 PF_HQ_ALIGNED_READS: 15058578.0 PF_HQ_ERROR_RATE: 0.007076 PF_HQ_MEDIAN_MISMATCHES: 0.0 PF_INDEL_RATE: 0.000423 PF_MISMATCH_RATE: 0.007098 PF_NOISE_READS: 0.0 PF_READS: 15373354.0 PF_READS_ALIGNED: 15373354.0 PF_READS_IMPROPER_PAIRS: 118518.0 READS_ALIGNED_IN_PAIRS: 15373354.0 READ_GROUP: '' SAMPLE: '' STRAND_BALANCE: 0.5 TOTAL_READS: 15373354.0