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Neurosphere Cultured Cells Cortex Derived
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Bisulfite Seq
H3K27me3
H3K36me3
H3K4me1
H3K4me3
H3K9me3
MRE Seq
MeDIP Seq
mRNA Seq
smRNA Seq
UCSF UBC
UCSF UBC
UCSF UBC
UCSF UBC
UCSF UBC
UCSF UBC
UCSF UBC
UCSF UBC
UCSF UBC
UCSF UBC
HuFNSC02...
HuFNSC02...
HuFNSC04...
HuFNSC04...
HuFNSC01...
HuFNSC02...
HuFNSC01...
HuFNSC02...
HuFNSC01...
HuFNSC02...
HuFNSC02...
HuFNSC01...
HuFNSC02...
HuFNSC01...
HuFNSC02...
HuFNSC01...
HuFNSC02...
HuFNSC01...
HuFNSC02...
HuFNSC03...
HuFNSC04...
HuFNSC01...
HuFNSC02...
HuFNSC03...
HuFNSC04...
Bisulfite_Seq; UCSF_UBC; HuFNSC02
Bisulfite_Seq; UCSF_UBC; HuFNSC02; readcoverage
Bisulfite_Seq; UCSF_UBC; HuFNSC04
Bisulfite_Seq; UCSF_UBC; HuFNSC04; readcoverage
H3K27me3; UCSF_UBC; HuFNSC01
H3K27me3; UCSF_UBC; HuFNSC02
H3K36me3; UCSF_UBC; HuFNSC01
H3K36me3; UCSF_UBC; HuFNSC02
H3K4me1; UCSF_UBC; HuFNSC01
H3K4me1; UCSF_UBC; HuFNSC02
H3K4me3; UCSF_UBC; HuFNSC02
H3K9me3; UCSF_UBC; HuFNSC01
H3K9me3; UCSF_UBC; HuFNSC02
MRE_Seq; UCSF_UBC; HuFNSC01
MRE_Seq; UCSF_UBC; HuFNSC02
MeDIP_Seq; UCSF_UBC; HuFNSC01
MeDIP_Seq; UCSF_UBC; HuFNSC02
mRNA_Seq; UCSF_UBC; HuFNSC01
mRNA_Seq; UCSF_UBC; HuFNSC02
mRNA_Seq; UCSF_UBC; HuFNSC03
mRNA_Seq; UCSF_UBC; HuFNSC04
smRNA_Seq; UCSF_UBC; HuFNSC01
smRNA_Seq; UCSF_UBC; HuFNSC02
smRNA_Seq; UCSF_UBC; HuFNSC03
smRNA_Seq; UCSF_UBC; HuFNSC04
0.6969
≈0
0.9813
≈0
0.6914
≈0
-0.0535
≈0
-0.0245
3.87e-25
0.1183
≈0
0.1314
≈0
0.0042
3.14e-03
-0.0375
≈0
-0.0408
≈0
0.0134
5.57e-01
0.0231
1.48e-05
-0.0162
3.74e-39
-0.0158
1.17e-34
0.8283
≈0
0.8398
≈0
0.0868
≈0
0.0882
≈0
0.0963
≈0
0.0942
≈0
-0.0495
1.55e-01
-0.0293
2.92e-01
0.0305
6.48e-01
-0.1005
6.86e-02
0.6969
≈0
0.7164
≈0
0.9656
≈0
0.1053
≈0
0.1511
≈0
0.0456
1.18e-37
0.0597
≈0
0.3642
≈0
0.2963
≈0
0.4067
≈0
-0.0347
≈0
-0.0285
≈0
0.6276
≈0
0.6202
≈0
0.6205
≈0
0.6252
≈0
0.1521
≈0
0.1422
≈0
0.1587
≈0
0.1374
≈0
0.3221
1.46e-06
0.3124
2.80e-07
0.2921
5.87e-10
0.2561
1.02e-03
0.9813
≈0
0.7164
≈0
0.7211
≈0
-0.0434
≈0
-0.0136
7.11e-15
0.1174
≈0
0.1315
≈0
0.0368
9.34e-26
-0.0051
8.12e-06
-0.0221
1.22e-30
-0.0029
1.62e-06
0.0062
3.56e-01
0.0163
1.36e-02
0.0163
1.78e-02
0.8262
≈0
0.8354
≈0
0.0956
≈0
0.0972
≈0
0.1054
≈0
0.0991
≈0
-0.0378
2.89e-01
-0.0192
4.89e-01
0.0202
8.75e-01
-0.0920
1.23e-01
0.6914
≈0
0.9656
≈0
0.7211
≈0
0.1013
≈0
0.1431
≈0
0.0407
1.00e-27
0.0559
≈0
0.3496
≈0
0.2886
≈0
0.3989
≈0
-0.0464
≈0
-0.0413
≈0
0.6150
≈0
0.6072
≈0
0.6067
≈0
0.6125
≈0
0.1492
≈0
0.1396
≈0
0.1560
≈0
0.1346
≈0
0.3054
1.79e-06
0.2977
3.88e-07
0.2762
6.99e-10
0.2471
1.06e-03
-0.0535
≈0
0.1053
≈0
-0.0434
≈0
0.1013
≈0
0.7182
≈0
-0.0554
6.49e-34
-0.0492
5.70e-12
0.0527
1.01e-08
0.0393
1.50e-02
0.0966
≈0
0.1295
≈0
0.1054
≈0
0.1739
≈0
0.1687
≈0
-0.0002
8.90e-03
-0.0120
1.50e-11
-0.0749
≈0
-0.0794
≈0
-0.0752
≈0
-0.0740
≈0
0.1218
1.34e-02
0.1247
1.20e-02
0.0635
1.72e-01
0.1221
1.83e-01
-0.0245
3.87e-25
0.1511
≈0
-0.0136
7.11e-15
0.1431
≈0
0.7182
≈0
-0.1322
≈0
-0.1048
≈0
0.0611
5.71e-11
0.0429
9.36e-04
0.1162
≈0
0.1003
≈0
0.0954
≈0
0.1935
≈0
0.1891
≈0
0.0503
≈0
0.0301
1.17e-14
-0.1167
≈0
-0.1226
≈0
-0.1154
≈0
-0.1089
≈0
0.1222
2.41e-02
0.1196
1.12e-02
0.0591
1.03e-01
0.1088
2.52e-01
0.1183
≈0
0.0456
1.18e-37
0.1174
≈0
0.0407
1.00e-27
-0.0554
6.49e-34
-0.1322
≈0
0.6527
≈0
0.0059
1.43e-01
-0.0042
5.31e-03
-0.0157
7.07e-34
0.2525
≈0
0.2387
≈0
-0.0572
≈0
-0.0560
≈0
0.1356
≈0
0.1252
≈0
0.3499
≈0
0.3578
≈0
0.3462
≈0
0.2814
≈0
0.0331
7.53e-01
0.0162
5.34e-01
0.0010
5.26e-01
0.0041
8.35e-01
0.1314
≈0
0.0597
≈0
0.1315
≈0
0.0559
≈0
-0.0492
5.70e-12
-0.1048
≈0
0.6527
≈0
-0.0053
1.36e-02
0.0000
7.23e-03
-0.0064
5.94e-17
0.2731
≈0
0.2698
≈0
-0.0782
≈0
-0.0767
≈0
0.1653
≈0
0.1492
≈0
0.3563
≈0
0.3682
≈0
0.3554
≈0
0.2809
≈0
-0.0290
2.35e-01
-0.0451
1.32e-01
-0.0413
1.57e-01
-0.0621
3.66e-01
0.0042
3.14e-03
0.3642
≈0
0.0368
9.34e-26
0.3496
≈0
0.0527
1.01e-08
0.0611
5.71e-11
0.0059
1.43e-01
-0.0053
1.36e-02
0.8933
≈0
0.4310
≈0
-0.1166
≈0
-0.1233
≈0
0.4960
≈0
0.4959
≈0
0.0407
1.52e-31
0.0406
3.50e-37
0.0937
≈0
0.0950
≈0
0.0953
≈0
0.0636
≈0
0.2050
1.39e-04
0.1822
1.76e-04
0.1461
2.15e-04
0.1465
2.87e-02
-0.0375
≈0
0.2963
≈0
-0.0051
8.12e-06
0.2886
≈0
0.0393
1.50e-02
0.0429
9.36e-04
-0.0042
5.31e-03
0.0000
7.23e-03
0.8933
≈0
0.4094
≈0
-0.1479
≈0
-0.1516
≈0
0.4030
≈0
0.4042
≈0
-0.0014
3.22e-04
-0.0002
2.80e-05
0.0868
≈0
0.0907
≈0
0.0882
≈0
0.0563
1.29e-42
0.1839
3.54e-03
0.1673
1.49e-03
0.1418
6.02e-04
0.1420
4.75e-02
-0.0408
≈0
0.4067
≈0
-0.0221
1.22e-30
0.3989
≈0
0.0966
≈0
0.1162
≈0
-0.0157
7.07e-34
-0.0064
5.94e-17
0.4310
≈0
0.4094
≈0
-0.0372
≈0
-0.0349
≈0
0.7075
≈0
0.7016
≈0
-0.0180
4.20e-26
-0.0092
3.11e-21
0.1217
≈0
0.1103
≈0
0.1226
≈0
0.0995
≈0
0.2732
1.23e-06
0.2444
2.19e-06
0.2398
3.47e-08
0.2670
2.17e-04
0.0134
5.57e-01
-0.0347
≈0
-0.0029
1.62e-06
-0.0464
≈0
0.1295
≈0
0.1003
≈0
0.2525
≈0
0.2731
≈0
-0.1166
≈0
-0.1479
≈0
-0.0372
≈0
0.8782
≈0
-0.0524
≈0
-0.0528
≈0
0.0343
6.69e-12
0.0341
2.09e-13
-0.0612
≈0
-0.0586
≈0
-0.0577
≈0
-0.0250
≈0
0.0741
1.53e-01
0.0736
1.13e-01
0.0470
2.35e-01
0.0675
2.07e-01
0.0231
1.48e-05
-0.0285
≈0
0.0062
3.56e-01
-0.0413
≈0
0.1054
≈0
0.0954
≈0
0.2387
≈0
0.2698
≈0
-0.1233
≈0
-0.1516
≈0
-0.0349
≈0
0.8782
≈0
-0.0558
≈0
-0.0559
≈0
0.0524
5.70e-34
0.0494
1.05e-29
-0.0741
≈0
-0.0712
≈0
-0.0695
≈0
-0.0332
≈0
0.0595
1.38e-01
0.0523
1.20e-01
0.0329
1.75e-01
0.0415
1.80e-01
-0.0162
3.74e-39
0.6276
≈0
0.0163
1.36e-02
0.6150
≈0
0.1739
≈0
0.1935
≈0
-0.0572
≈0
-0.0782
≈0
0.4960
≈0
0.4030
≈0
0.7075
≈0
-0.0524
≈0
-0.0558
≈0
0.9828
≈0
-0.0284
≈0
-0.0011
4.42e-13
0.1203
≈0
0.1022
≈0
0.1187
≈0
0.1149
≈0
0.2323
2.67e-04
0.2150
1.22e-04
0.2285
1.86e-05
0.2545
6.87e-04
-0.0158
1.17e-34
0.6202
≈0
0.0163
1.78e-02
0.6072
≈0
0.1687
≈0
0.1891
≈0
-0.0560
≈0
-0.0767
≈0
0.4959
≈0
0.4042
≈0
0.7016
≈0
-0.0528
≈0
-0.0559
≈0
0.9828
≈0
-0.0256
3.08e-41
0.0005
6.84e-09
0.1201
≈0
0.1024
≈0
0.1189
≈0
0.1143
≈0
0.2382
3.61e-05
0.2235
1.75e-05
0.2314
3.24e-06
0.2600
7.87e-04
0.8283
≈0
0.6205
≈0
0.8262
≈0
0.6067
≈0
-0.0002
8.90e-03
0.0503
≈0
0.1356
≈0
0.1653
≈0
0.0407
1.52e-31
-0.0014
3.22e-04
-0.0180
4.20e-26
0.0343
6.69e-12
0.0524
5.70e-34
-0.0284
≈0
-0.0256
3.08e-41
0.9459
≈0
0.0968
≈0
0.1035
≈0
0.1107
≈0
0.0873
≈0
-0.0473
1.15e-01
-0.0439
1.94e-01
-0.0409
2.23e-01
-0.0972
6.15e-02
0.8398
≈0
0.6252
≈0
0.8354
≈0
0.6125
≈0
-0.0120
1.50e-11
0.0301
1.17e-14
0.1252
≈0
0.1492
≈0
0.0406
3.50e-37
-0.0002
2.80e-05
-0.0092
3.11e-21
0.0341
2.09e-13
0.0494
1.05e-29
-0.0011
4.42e-13
0.0005
6.84e-09
0.9459
≈0
0.1003
≈0
0.1049
≈0
0.1129
≈0
0.0949
≈0
-0.0227
2.52e-01
-0.0171
3.66e-01
-0.0147
5.66e-01
-0.0710
1.21e-01
0.0868
≈0
0.1521
≈0
0.0956
≈0
0.1492
≈0
-0.0749
≈0
-0.1167
≈0
0.3499
≈0
0.3563
≈0
0.0937
≈0
0.0868
≈0
0.1217
≈0
-0.0612
≈0
-0.0741
≈0
0.1203
≈0
0.1201
≈0
0.0968
≈0
0.1003
≈0
0.8879
≈0
0.8823
≈0
0.8400
≈0
0.0258
5.42e-01
0.0118
1.83e-01
0.0439
5.93e-01
0.0732
9.67e-01
0.0882
≈0
0.1422
≈0
0.0972
≈0
0.1396
≈0
-0.0794
≈0
-0.1226
≈0
0.3578
≈0
0.3682
≈0
0.0950
≈0
0.0907
≈0
0.1103
≈0
-0.0586
≈0
-0.0712
≈0
0.1022
≈0
0.1024
≈0
0.1035
≈0
0.1049
≈0
0.8879
≈0
0.8791
≈0
0.8243
≈0
0.0174
4.31e-01
0.0110
2.71e-01
0.0376
4.73e-01
0.0603
9.77e-01
0.0963
≈0
0.1587
≈0
0.1054
≈0
0.1560
≈0
-0.0752
≈0
-0.1154
≈0
0.3462
≈0
0.3554
≈0
0.0953
≈0
0.0882
≈0
0.1226
≈0
-0.0577
≈0
-0.0695
≈0
0.1187
≈0
0.1189
≈0
0.1107
≈0
0.1129
≈0
0.8823
≈0
0.8791
≈0
0.8520
≈0
0.0306
6.72e-01
0.0168
5.96e-01
0.0430
8.45e-01
0.0821
8.72e-01
0.0942
≈0
0.1374
≈0
0.0991
≈0
0.1346
≈0
-0.0740
≈0
-0.1089
≈0
0.2814
≈0
0.2809
≈0
0.0636
≈0
0.0563
1.29e-42
0.0995
≈0
-0.0250
≈0
-0.0332
≈0
0.1149
≈0
0.1143
≈0
0.0873
≈0
0.0949
≈0
0.8400
≈0
0.8243
≈0
0.8520
≈0
-0.0040
1.33e-01
-0.0036
1.47e-01
0.0672
9.44e-01
0.0551
7.48e-01
-0.0495
1.55e-01
0.3221
1.46e-06
-0.0378
2.89e-01
0.3054
1.79e-06
0.1218
1.34e-02
0.1222
2.41e-02
0.0331
7.53e-01
-0.0290
2.35e-01
0.2050
1.39e-04
0.1839
3.54e-03
0.2732
1.23e-06
0.0741
1.53e-01
0.0595
1.38e-01
0.2323
2.67e-04
0.2382
3.61e-05
-0.0473
1.15e-01
-0.0227
2.52e-01
0.0258
5.42e-01
0.0174
4.31e-01
0.0306
6.72e-01
-0.0040
1.33e-01
-0.0293
2.92e-01
0.3124
2.80e-07
-0.0192
4.89e-01
0.2977
3.88e-07
0.1247
1.20e-02
0.1196
1.12e-02
0.0162
5.34e-01
-0.0451
1.32e-01
0.1822
1.76e-04
0.1673
1.49e-03
0.2444
2.19e-06
0.0736
1.13e-01
0.0523
1.20e-01
0.2150
1.22e-04
0.2235
1.75e-05
-0.0439
1.94e-01
-0.0171
3.66e-01
0.0118
1.83e-01
0.0110
2.71e-01
0.0168
5.96e-01
-0.0036
1.47e-01
0.0305
6.48e-01
0.2921
5.87e-10
0.0202
8.75e-01
0.2762
6.99e-10
0.0635
1.72e-01
0.0591
1.03e-01
0.0010
5.26e-01
-0.0413
1.57e-01
0.1461
2.15e-04
0.1418
6.02e-04
0.2398
3.47e-08
0.0470
2.35e-01
0.0329
1.75e-01
0.2285
1.86e-05
0.2314
3.24e-06
-0.0409
2.23e-01
-0.0147
5.66e-01
0.0439
5.93e-01
0.0376
4.73e-01
0.0430
8.45e-01
0.0672
9.44e-01
-0.1005
6.86e-02
0.2561
1.02e-03
-0.0920
1.23e-01
0.2471
1.06e-03
0.1221
1.83e-01
0.1088
2.52e-01
0.0041
8.35e-01
-0.0621
3.66e-01
0.1465
2.87e-02
0.1420
4.75e-02
0.2670
2.17e-04
0.0675
2.07e-01
0.0415
1.80e-01
0.2545
6.87e-04
0.2600
7.87e-04
-0.0972
6.15e-02
-0.0710
1.21e-01
0.0732
9.67e-01
0.0603
9.77e-01
0.0821
8.72e-01
0.0551
7.48e-01
X
Color code
Background total
Foreground total
show chrom
show replicas
Statistics
Parameters
Statistics
Total
Chrom
Correlation
0.12
Observations
3061267
Correlation stDev
0.27
Bg Correlation
0.009
Bg Correlation stDev
0.12
P-value
1.2e-287
M-W statistics
-32
Parameters
Name
Value
step
100
strand
1
wSize
200000
wStep
200000
noiseLevel
0.0
flankSize
0
kernelSigma
2000
threshold
0;
kernelType
NORMAL
maxNA
99
maxZero
99
nShuffle
30
pVal
0
qVal
0
Rscrpit
1
Distances
DETAIL
OutChrom
1
chrom
cc
count
All
0.07
349088
chr1
0.07
349088
chr2
0.07
349088
chr3
0.07
349088
chr4
0.07
349088
chr5
0.07
349088
chr6
0.07
349088
chr7
0.07
349088
chr8
0.07
349088
chr9
0.07
349088
chr10
0.07
349088
chr11
0.07
349088
chr12
0.07
349088
chr13
0.07
349088
chr14
0.07
349088
chr15
0.07
349088
chr16
0.07
349088
chr17
0.07
349088
chr18
0.07
349088
chr19
0.07
349088
chr20
0.07
349088
chr21
0.07
349088
chr22
0.07
349088
chrX
0.07
349088
chrY
0.07
349088