tissue Brain Germinal Matrix

Return to main page Bis­ulf­ite Seq H3K27m­e3 H3K36m­e3 H3K4me­1 H3K4me­3 H3K9me­3 MeD­IP Seq MeD­IP Seq Inp­ut mRN­A Seq smRNA Seq UCS­F UBC UCSF UBC UCSF UBC UCSF UBC UCSF UBC UCSF UBC UCS­F UBC UCS­F UBC UCS­F UBC UCSF UBC HuF­GM0­2..­. HuF­GM0­1..­. HuF­GM0­2..­. HuF­GM0­1..­. HuF­GM0­2..­. HuF­GM0­1..­. HuF­GM0­2..­. HuF­GM0­1..­. HuF­GM0­2..­. HuF­GM0­1..­. HuF­GM0­2..­. HuF­GM0­2..­. HuF­GM0­2..­. HuF­GM0­2..­. HuF­GM0­1..­. HuF­GM0­2..­. HuF­GM0­2;.­.. Bisulfite_Seq; UCSF_UBC; HuFGM02 H3K27me3; UCSF_UBC; HuFGM01 H3K27me3; UCSF_UBC; HuFGM02 H3K36me3; UCSF_UBC; HuFGM01 H3K36me3; UCSF_UBC; HuFGM02 H3K4me1; UCSF_UBC; HuFGM01 H3K4me1; UCSF_UBC; HuFGM02 H3K4me3; UCSF_UBC; HuFGM01 H3K4me3; UCSF_UBC; HuFGM02 H3K9me3; UCSF_UBC; HuFGM01 H3K9me3; UCSF_UBC; HuFGM02 MeDIP_Seq; UCSF_UBC; HuFGM02 MeDIP_Seq_Input; UCSF_UBC; HuFGM02 mRNA_Seq; UCSF_UBC; HuFGM02 smRNA_Seq; UCSF_UBC; HuFGM01 smRNA_Seq; UCSF_UBC; HuFGM02 smRNA_Seq; UCSF_UBC; HuFGM02; m09072 0.0630 ≈0 -0.0064 1.72e-02 0.1593 ≈0 0.1498 ≈0 -0.1022 ≈0 -0.0313 ≈0 -0.0694 ≈0 -0.0151 4.51e-12 0.0170 6.04e-05 0.1037 ≈0 0.8109 ≈0 -0.0357 ≈0 0.0788 ≈0 -0.0053 1.88e-03 0.0174 5.27e-02 0.1110 6.11e-01 0.0630 ≈0 0.6385 ≈0 0.0256 1.11e-10 0.0111 1.96e-04 0.1036 ≈0 0.1591 ≈0 0.3219 ≈0 0.3513 ≈0 0.1732 ≈0 0.2123 ≈0 0.1008 ≈0 0.0516 9.36e-43 0.0216 2.25e-01 0.1083 5.08e-38 0.1303 2.41e-10 0.2379 6.44e-07 -0.0064 1.72e-02 0.6385 ≈0 -0.0108 7.62e-01 -0.0119 4.79e-01 0.0807 ≈0 0.1180 ≈0 0.2668 ≈0 0.2835 ≈0 0.2046 ≈0 0.2303 ≈0 0.0317 7.48e-19 0.0601 ≈0 -0.0105 1.29e-29 0.0842 3.65e-22 0.1024 1.88e-07 0.2129 1.82e-05 0.1593 ≈0 0.0256 1.11e-10 -0.0108 7.62e-01 0.5961 ≈0 0.0024 9.33e-02 0.0292 4.29e-12 0.0314 1.76e-08 0.0350 3.59e-20 0.2293 ≈0 0.2264 ≈0 0.2044 ≈0 0.1296 ≈0 0.3091 ≈0 0.0129 4.99e-01 0.0261 8.20e-01 0.1144 1.93e-01 0.1498 ≈0 0.0111 1.96e-04 -0.0119 4.79e-01 0.5961 ≈0 -0.0010 4.71e-07 0.0249 1.34e-04 0.0162 5.47e-01 0.0224 9.23e-05 0.1746 ≈0 0.1788 ≈0 0.1954 ≈0 0.1290 ≈0 0.3132 ≈0 0.0080 4.03e-02 0.0253 5.64e-01 0.1452 1.32e-02 -0.1022 ≈0 0.1036 ≈0 0.0807 ≈0 0.0024 9.33e-02 -0.0010 4.71e-07 0.8609 ≈0 0.4476 ≈0 0.4208 ≈0 -0.1911 ≈0 -0.1835 ≈0 -0.0978 ≈0 0.0824 ≈0 0.0807 ≈0 0.0870 6.13e-41 0.1138 2.73e-10 0.1697 7.18e-03 -0.0313 ≈0 0.1591 ≈0 0.1180 ≈0 0.0292 4.29e-12 0.0249 1.34e-04 0.8609 ≈0 0.4622 ≈0 0.4578 ≈0 -0.1906 ≈0 -0.1596 ≈0 -0.0222 1.40e-34 0.0873 ≈0 0.0891 ≈0 0.0981 ≈0 0.1227 1.51e-12 0.1739 1.79e-03 -0.0694 ≈0 0.3219 ≈0 0.2668 ≈0 0.0314 1.76e-08 0.0162 5.47e-01 0.4476 ≈0 0.4622 ≈0 0.7074 ≈0 -0.0220 ≈0 -0.0138 2.05e-21 -0.0618 ≈0 0.0250 1.77e-01 0.1260 ≈0 0.1715 ≈0 0.1721 7.51e-21 0.2409 1.61e-06 -0.0151 4.51e-12 0.3513 ≈0 0.2835 ≈0 0.0350 3.59e-20 0.0224 9.23e-05 0.4208 ≈0 0.4578 ≈0 0.7074 ≈0 -0.0245 ≈0 0.0085 3.43e-01 -0.0095 6.03e-09 0.0132 5.97e-01 0.1261 ≈0 0.1768 ≈0 0.1816 1.02e-22 0.2794 3.28e-07 0.0170 6.04e-05 0.1732 ≈0 0.2046 ≈0 0.2293 ≈0 0.1746 ≈0 -0.1911 ≈0 -0.1906 ≈0 -0.0220 ≈0 -0.0245 ≈0 0.8434 ≈0 0.0140 8.21e-02 0.0369 6.18e-08 -0.0310 ≈0 -0.0263 1.59e-11 0.0181 3.39e-01 0.1732 3.17e-04 0.1037 ≈0 0.2123 ≈0 0.2303 ≈0 0.2264 ≈0 0.1788 ≈0 -0.1835 ≈0 -0.1596 ≈0 -0.0138 2.05e-21 0.0085 3.43e-01 0.8434 ≈0 0.1019 ≈0 0.0333 3.80e-06 -0.0236 ≈0 -0.0035 5.03e-02 0.0294 7.65e-01 0.1843 8.58e-05 0.8109 ≈0 0.1008 ≈0 0.0317 7.48e-19 0.2044 ≈0 0.1954 ≈0 -0.0978 ≈0 -0.0222 1.40e-34 -0.0618 ≈0 -0.0095 6.03e-09 0.0140 8.21e-02 0.1019 ≈0 0.0910 ≈0 0.0885 ≈0 -0.0364 2.14e-10 -0.0266 1.20e-03 0.0799 6.20e-01 -0.0357 ≈0 0.0516 9.36e-43 0.0601 ≈0 0.1296 ≈0 0.1290 ≈0 0.0824 ≈0 0.0873 ≈0 0.0250 1.77e-01 0.0132 5.97e-01 0.0369 6.18e-08 0.0333 3.80e-06 0.0910 ≈0 0.0215 1.73e-14 -0.0677 1.48e-32 -0.0326 4.16e-04 0.0705 1.36e-01 0.0788 ≈0 0.0216 2.25e-01 -0.0105 1.29e-29 0.3091 ≈0 0.3132 ≈0 0.0807 ≈0 0.0891 ≈0 0.1260 ≈0 0.1261 ≈0 -0.0310 ≈0 -0.0236 ≈0 0.0885 ≈0 0.0215 1.73e-14 0.0713 8.54e-17 0.0947 3.49e-03 0.1594 6.35e-01 -0.0053 1.88e-03 0.1083 5.08e-38 0.0842 3.65e-22 0.0129 4.99e-01 0.0080 4.03e-02 0.0870 6.13e-41 0.0981 ≈0 0.1715 ≈0 0.1768 ≈0 -0.0263 1.59e-11 -0.0035 5.03e-02 -0.0364 2.14e-10 -0.0677 1.48e-32 0.0713 8.54e-17 0.0174 5.27e-02 0.1303 2.41e-10 0.1024 1.88e-07 0.0261 8.20e-01 0.0253 5.64e-01 0.1138 2.73e-10 0.1227 1.51e-12 0.1721 7.51e-21 0.1816 1.02e-22 0.0181 3.39e-01 0.0294 7.65e-01 -0.0266 1.20e-03 -0.0326 4.16e-04 0.0947 3.49e-03 0.1110 6.11e-01 0.2379 6.44e-07 0.2129 1.82e-05 0.1144 1.93e-01 0.1452 1.32e-02 0.1697 7.18e-03 0.1739 1.79e-03 0.2409 1.61e-06 0.2794 3.28e-07 0.1732 3.17e-04 0.1843 8.58e-05 0.0799 6.20e-01 0.0705 1.36e-01 0.1594 6.35e-01

X Color code Background total Foreground total show chrom show replicas Statistics Parameters Statistics Total Chrom Correlation 0.12 Observations 3061267 Correlation stDev 0.27 Bg Correlation 0.009 Bg Correlation stDev 0.12 P-value 1.2e-287 M-W statistics -32 Parameters Name Value step 100 strand 1 wSize 200000 wStep 200000 noiseLevel 0.0 flankSize 0 kernelSigma 2000 threshold 0; kernelType NORMAL maxNA 99 maxZero 99 nShuffle 30 pVal 0 qVal 0 Rscrpit 1 Distances DETAIL OutChrom 1 chrom cc count All 0.07 349088 chr1 0.07 349088 chr2 0.07 349088 chr3 0.07 349088 chr4 0.07 349088 chr5 0.07 349088 chr6 0.07 349088 chr7 0.07 349088 chr8 0.07 349088 chr9 0.07 349088 chr10 0.07 349088 chr11 0.07 349088 chr12 0.07 349088 chr13 0.07 349088 chr14 0.07 349088 chr15 0.07 349088 chr16 0.07 349088 chr17 0.07 349088 chr18 0.07 349088 chr19 0.07 349088 chr20 0.07 349088 chr21 0.07 349088 chr22 0.07 349088 chrX 0.07 349088 chrY 0.07 349088